Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,107,299 |
A→G |
V289A (GTG→GCG) |
ymdD ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,107,299 | 0 | A | G | 99.3%
| 943.5
/ ‑3.5
| 295 | V289A (GTG→GCG) | ymdD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (154/139); total (156/139) |
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01 |
Only 100 of 306 total aligned reads displayed.
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAG > NC_000913/1107209‑1107387
|
tgAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACcgca < 2:1712286/93‑1 (MQ=255)
tgAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACcgca < 1:2214933/93‑1 (MQ=255)
ccAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCa < 1:3481767/93‑1 (MQ=255)
cAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCAc < 2:516349/93‑1 (MQ=255)
agatagatAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCAcc < 2:8715825/93‑1 (MQ=255)
gatagataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCa < 2:6963427/93‑1 (MQ=255)
tagataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATc > 1:6243724/1‑93 (MQ=255)
tagataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATc < 1:5606901/93‑1 (MQ=255)
agataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATcc > 1:5298947/1‑93 (MQ=255)
agataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATcc < 1:5196524/93‑1 (MQ=255)
taAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcaca < 1:2111798/93‑1 (MQ=255)
taAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcaca > 1:2825460/1‑93 (MQ=255)
taAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcaca < 2:5902971/93‑1 (MQ=255)
taAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcaca < 1:8229348/93‑1 (MQ=255)
aaaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAg > 1:4260624/1‑93 (MQ=255)
aaaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAg < 1:4965309/93‑1 (MQ=255)
aaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGa > 2:6637819/1‑93 (MQ=255)
aCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAc < 1:7238852/93‑1 (MQ=255)
aGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCg < 2:1923013/93‑1 (MQ=255)
gCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGa < 1:4766979/93‑1 (MQ=255)
gATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAgg < 2:9241654/93‑1 (MQ=255)
aTGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGa < 2:6480749/93‑1 (MQ=255)
tGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAc > 2:9444800/1‑93 (MQ=255)
tGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAc < 1:6693645/93‑1 (MQ=255)
ggTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGGGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGCCCa < 1:6805685/92‑1 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg > 1:1013625/1‑93 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg > 2:1425384/1‑93 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg > 1:7304782/1‑93 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg < 2:3105380/93‑1 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg > 1:652513/1‑93 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg < 1:1645301/93‑1 (MQ=255)
tAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATgg < 2:3135547/93‑1 (MQ=255)
aaCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGt > 2:180831/1‑93 (MQ=255)
aaCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGt < 1:9795077/93‑1 (MQ=255)
aaCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGt > 1:4912211/1‑93 (MQ=255)
aCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTg > 1:569862/1‑93 (MQ=255)
cAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGa < 2:4754944/93‑1 (MQ=255)
aaaaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAt < 1:2334059/93‑1 (MQ=255)
aaaaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAt < 1:9681441/93‑1 (MQ=255)
aaaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATc > 2:6555813/1‑93 (MQ=255)
aaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCa > 2:7098066/1‑93 (MQ=255)
aTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCAc > 1:9375082/1‑93 (MQ=255)
tCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACt < 2:2387499/93‑1 (MQ=255)
cACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTc < 2:4709620/93‑1 (MQ=255)
aCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCg > 1:5070588/1‑93 (MQ=255)
aCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCg < 1:9921408/93‑1 (MQ=255)
ccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGTACCATGGTGATCACCGACTCGGt > 2:5543344/1‑93 (MQ=255)
ccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGt < 2:5831345/93‑1 (MQ=255)
ccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGt < 2:2969981/93‑1 (MQ=255)
ccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGt < 2:6398956/93‑1 (MQ=255)
cgcgCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGtt < 2:10021638/93‑1 (MQ=255)
cgcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTc > 2:3404114/1‑93 (MQ=255)
cgcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTc < 1:2023653/93‑1 (MQ=255)
cTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGt > 2:261561/1‑93 (MQ=255)
gACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTAc < 2:4934371/93‑1 (MQ=255)
gACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGCACCATGGTGATCAACGACTCGGTTTCGTAc > 2:2174569/1‑93 (MQ=255)
gACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTAACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTAc > 2:1569574/1‑93 (MQ=255)
cTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACAt > 1:442909/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGCCTCGGTTTCGTACATc > 2:3800800/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATc > 2:6720942/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATc > 2:9490631/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATc > 2:7379740/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATc > 2:3952106/1‑93 (MQ=255)
ggAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATcc > 1:5983284/1‑93 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCa < 1:1281931/93‑1 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCa < 2:4597691/93‑1 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCa > 2:5422850/1‑93 (MQ=255)
aaGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAg < 1:2614088/93‑1 (MQ=255)
aGTTAAGCACACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAgg < 1:6979642/93‑1 (MQ=255)
aGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAgg > 2:5779796/1‑93 (MQ=255)
aGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAgg < 1:91996/93‑1 (MQ=255)
gTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCCTCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCCTACATCCAGGc > 1:4172301/1‑93 (MQ=255)
ttAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCa < 1:1155737/93‑1 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCTGGCAt < 2:9108484/93‑1 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAt < 2:4100907/93‑1 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAt < 2:3310777/93‑1 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAt < 1:9523863/93‑1 (MQ=255)
aaGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATc > 1:3788274/1‑93 (MQ=255)
aaCGGTGGCCAAAGGAGAAGACCGCATTCCCCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCAc < 1:5816981/93‑1 (MQ=255)
aaCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCAc < 2:8108210/93‑1 (MQ=255)
aaCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCAc < 2:7569357/93‑1 (MQ=255)
cGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATGGCCACTg > 2:8803741/1‑93 (MQ=255)
ggTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGc > 2:2079077/1‑93 (MQ=255)
tGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCa < 2:9682033/93‑1 (MQ=255)
cAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgc < 1:4048664/93‑1 (MQ=255)
cAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgc < 1:9051008/93‑1 (MQ=255)
aaaGGAGAAGCCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCAACTGCCATAgcg < 2:7607582/93‑1 (MQ=255)
aaaGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgcg > 2:5080062/1‑93 (MQ=255)
aaaGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgcg > 2:7423160/1‑93 (MQ=255)
aaGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgcgc > 2:2759889/1‑93 (MQ=255)
gagaAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTgg < 1:7972298/93‑1 (MQ=255)
gagaAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTgg > 1:8303913/1‑93 (MQ=255)
gagaAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGACCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTgg < 2:8672300/93‑1 (MQ=255)
agaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGt > 1:301725/1‑93 (MQ=255)
agaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGt > 1:7382722/1‑93 (MQ=255)
agaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGt > 1:7595536/1‑93 (MQ=255)
agaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGt > 1:8795446/1‑93 (MQ=255)
gaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAg > 2:8876058/1‑93 (MQ=255)
gaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAg > 2:3576911/1‑93 (MQ=255)
gaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAg < 2:4424887/93‑1 (MQ=255)
|
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAG > NC_000913/1107209‑1107387
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAAT > NC_000913/1107206‑1107392
|
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCG < SRR4302540.9544289/94‑1 (MQ=60)
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCG > SRR4302540.528122/1‑94 (MQ=60)
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCG < SRR4302540.774965/94‑1 (MQ=60)
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCG > SRR4302540.8519090/1‑94 (MQ=60)
GGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGC < SRR4302540.4184268/94‑1 (MQ=60)
GGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGC < SRR4302540.9624158/94‑1 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT < SRR4302540.2238838/94‑1 (MQ=60)
GGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT < SRR4302540.8066929/94‑1 (MQ=60)
CCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCAC < SRR4302540.3519676/94‑1 (MQ=60)
CAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACA > SRR4302540.5943680/1‑94 (MQ=60)
AGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCA < SRR4302540.5385954/94‑1 (MQ=60)
AGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCA > SRR4302540.6396101/1‑94 (MQ=60)
AGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCA > SRR4302540.4883806/1‑94 (MQ=60)
GATATATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCAT < SRR4302540.3866956/94‑1 (MQ=60)
GATAGGTAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCAT > SRR4302540.195018/1‑94 (MQ=60)
ATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATC > SRR4302540.5875444/1‑94 (MQ=60)
ATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATC > SRR4302540.6313207/1‑94 (MQ=60)
TAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCC > SRR4302540.5356916/1‑94 (MQ=60)
TAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCC < SRR4302540.5668593/94‑1 (MQ=60)
AGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCA < SRR4302540.5253113/94‑1 (MQ=60)
ATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACA > SRR4302540.2855993/1‑94 (MQ=60)
ATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACA > SRR4302540.2999863/1‑94 (MQ=60)
ATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACA > SRR4302540.5160068/1‑94 (MQ=60)
ATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACA < SRR4302540.6802032/94‑1 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG < SRR4302540.2134459/94‑1 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG > SRR4302540.2328643/1‑94 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG < SRR4302540.2329326/94‑1 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG < SRR4302540.3712054/94‑1 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG > SRR4302540.4306968/1‑94 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG > SRR4302540.6138843/1‑94 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG < SRR4302540.8325006/94‑1 (MQ=60)
TAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAG < SRR4302540.8354837/94‑1 (MQ=60)
aaacaacgagtgcaTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACGGCATTCACCATCCACAGA < SRR4302540.5019014/80‑1 (MQ=60)
AAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGA < SRR4302540.5019017/94‑1 (MQ=60)
AACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAC > SRR4302540.8622656/1‑94 (MQ=60)
ACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACC < SRR4302540.7319590/94‑1 (MQ=60)
GCGATGCGTTAACAAAATAAGTCGCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG < SRR4302540.45029/94‑1 (MQ=60)
GCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG > SRR4302540.9209660/1‑94 (MQ=60)
GCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG < SRR4302540.4817886/94‑1 (MQ=60)
CGATGCGTTAACAAAATAAGTCACCCGCGCGTACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGG < SRR4302540.5023556/94‑1 (MQ=60)
GATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGA > SRR4302540.4208957/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCGTCCACAGACCGAGGAC > SRR4302540.9430572/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302540.4791707/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302540.5452543/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302540.9228163/1‑94 (MQ=60)
TGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACC < SRR4302540.6767542/94‑1 (MQ=60)
GGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGGGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGCCCAT < SRR4302540.6880990/94‑1 (MQ=60)
CGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT < SRR4302540.10031444/94‑1 (MQ=60)
CGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT > SRR4302540.7195176/1‑94 (MQ=60)
CATTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT < SRR4302540.9593546/94‑1 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG > SRR4302540.659456/1‑94 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG > SRR4302540.6656161/1‑94 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG > SRR4302540.7386324/1‑94 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG > SRR4302540.1023900/1‑94 (MQ=60)
TTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGG < SRR4302540.1663266/94‑1 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT > SRR4302540.2167015/1‑94 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT > SRR4302540.4965104/1‑94 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT > SRR4302540.4965103/1‑94 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG < SRR4302540.9909802/94‑1 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG > SRR4302540.576050/1‑94 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG < SRR4302540.5714929/94‑1 (MQ=60)
ACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGA > SRR4302540.10092909/1‑94 (MQ=60)
CAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAT < SRR4302540.2885065/94‑1 (MQ=60)
AAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATC < SRR4302540.9795348/94‑1 (MQ=60)
AAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATC < SRR4302540.2359207/94‑1 (MQ=60)
AAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATC < SRR4302540.3570916/94‑1 (MQ=60)
AAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCA > SRR4302540.945485/1‑94 (MQ=60)
AATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCAC > SRR4302540.9486683/1‑94 (MQ=60)
TAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCTTTCACCATCCACAGACCGAGGACCATGGTGATCACCG < SRR4302540.9747695/94‑1 (MQ=60)
TCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTC < SRR4302540.5835883/94‑1 (MQ=60)
TCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTC > SRR4302540.10032835/1‑94 (MQ=60)
CACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCG > SRR4302540.5125411/1‑94 (MQ=60)
CACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCG > SRR4302540.1286639/1‑94 (MQ=60)
ACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACGGAGGACCATGGGGATCACCGACTCGG > SRR4302540.1343347/1‑94 (MQ=60)
ACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGG > SRR4302540.9489169/1‑94 (MQ=60)
ACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGG < SRR4302540.10037263/94‑1 (MQ=60)
CCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTT < SRR4302540.7641651/94‑1 (MQ=60)
CCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTT > SRR4302540.4295575/1‑94 (MQ=60)
CGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCG > SRR4302540.734334/1‑94 (MQ=60)
CGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCG < SRR4302540.2045520/94‑1 (MQ=60)
CGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCG > SRR4302540.5670030/1‑94 (MQ=60)
CTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTA > SRR4302540.6503215/1‑94 (MQ=60)
TGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTAC < SRR4302540.495575/94‑1 (MQ=60)
GACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACA > SRR4302540.5058739/1‑94 (MQ=60)
GACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACA < SRR4302540.880174/94‑1 (MQ=60)
ACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACAT > SRR4302540.447629/1‑94 (MQ=60)
CTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATC > SRR4302540.446895/1‑94 (MQ=60)
TGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCC > SRR4302540.6049548/1‑94 (MQ=60)
TGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCC > SRR4302540.764556/1‑94 (MQ=60)
TGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACCCGGTTTCGTACAcac > SRR4302540.7439795/1‑91 (MQ=60)
TGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGAACGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCC > SRR4302540.5010821/1‑94 (MQ=60)
GGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCA > SRR4302540.4150248/1‑94 (MQ=60)
GAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCGCCGACTCGGTTTCGTACATCCAG < SRR4302540.408730/94‑1 (MQ=60)
GAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAG < SRR4302540.4504670/94‑1 (MQ=60)
GAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAG < SRR4302540.1295152/94‑1 (MQ=60)
GAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAG > SRR4302540.6143486/1‑94 (MQ=60)
AAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGG < SRR4302540.2642319/94‑1 (MQ=60)
AGTTAAGCACACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC < SRR4302540.7057178/94‑1 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCCTCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCCTACATCCAGGC > SRR4302540.4217566/1‑94 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC < SRR4302540.2400339/94‑1 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC < SRR4302540.2400340/94‑1 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC < SRR4302540.92965/94‑1 (MQ=60)
TTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAT < SRR4302540.1167766/94‑1 (MQ=60)
TAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATC < SRR4302540.9636631/94‑1 (MQ=60)
TAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATC > SRR4302540.3829580/1‑94 (MQ=60)
AAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCG < SRR4302540.6737791/94‑1 (MQ=60)
AAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCG < SRR4302540.2061522/94‑1 (MQ=60)
AGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGC < SRR4302540.4344707/94‑1 (MQ=60)
AGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGC > SRR4302540.7332610/1‑94 (MQ=60)
GCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCC > SRR4302540.1137995/1‑94 (MQ=60)
GCAAACGCTGGCCAAAGGAGAAGCCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATTCAGGCATggca > SRR4302540.1137996/1‑90 (MQ=60)
CAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCA > SRR4302540.743425/1‑94 (MQ=60)
CAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCA < SRR4302540.6832129/94‑1 (MQ=60)
AAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGTATCGCCAC > SRR4302540.2842850/1‑94 (MQ=60)
AAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCAC < SRR4302540.5314235/94‑1 (MQ=60)
AACGGTGGCCAAAGGAGAAGACCGCATTCCCCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACT < SRR4302540.5881282/94‑1 (MQ=60)
ACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTG > SRR4302540.10047784/1‑94 (MQ=60)
ACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTG > SRR4302540.5261144/1‑94 (MQ=60)
GTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCA < SRR4302540.2095135/94‑1 (MQ=60)
TGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCAT < SRR4302540.698708/94‑1 (MQ=60)
GGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCAT < SRR4302540.7459165/94‑1 (MQ=60)
CCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGC < SRR4302540.9103633/94‑1 (MQ=60)
CAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCG < SRR4302540.9159660/94‑1 (MQ=60)
CAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCG < SRR4302540.4092318/94‑1 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGCCCGTGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACGGCCATAGCGC > SRR4302540.7758788/1‑94 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGC > SRR4302540.7758789/1‑94 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGC > SRR4302540.7119940/1‑94 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGC > SRR4302540.8285276/1‑94 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGC > SRR4302540.3498168/1‑94 (MQ=60)
AAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCT > SRR4302540.513362/1‑94 (MQ=60)
AAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCT > SRR4302540.6002114/1‑94 (MQ=60)
AGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTG > SRR4302540.3237491/1‑94 (MQ=60)
AGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTG < SRR4302540.1655363/94‑1 (MQ=60)
AGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAGCGCCACTGCCATAGCGCTG > SRR4302540.9895817/1‑94 (MQ=60)
GGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGG > SRR4302540.8400338/1‑94 (MQ=60)
GGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGG > SRR4302540.900695/1‑94 (MQ=60)
GGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGG > SRR4302540.4222394/1‑94 (MQ=60)
GGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGG < SRR4302540.6944775/94‑1 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT > SRR4302540.7680866/1‑94 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT > SRR4302540.8897161/1‑94 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT < SRR4302540.8065189/94‑1 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT > SRR4302540.304716/1‑94 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT > SRR4302540.7464984/1‑94 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT < SRR4302540.2163595/94‑1 (MQ=60)
AGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTT < SRR4302540.1828820/94‑1 (MQ=60)
AGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATAGCCACTGCCATAGCGCTGGTT > SRR4302540.9823009/1‑94 (MQ=60)
GAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTG < SRR4302540.1280949/94‑1 (MQ=60)
GAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTG > SRR4302540.2759139/1‑94 (MQ=60)
AAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACCTCCAGGCATCGCCACTGCCATAGCGCTGGTTGA > SRR4302540.9787309/1‑94 (MQ=60)
CCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAA > SRR4302540.1137910/1‑94 (MQ=60)
CGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAA < SRR4302540.6247874/94‑1 (MQ=60)
GCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGGCTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAAT < SRR4302540.213155/94‑1 (MQ=60)
GCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAAT < SRR4302540.4367833/94‑1 (MQ=60)
GCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAAT < SRR4302540.3082181/94‑1 (MQ=60)
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TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAAT > NC_000913/1107206‑1107392
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
