Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,107,299 |
A→G |
V289A (GTG→GCG) |
ymdD ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,107,299 | 0 | A | G | 99.6%
| 708.7
/ ‑5.3
| 221 | V289A (GTG→GCG) | ymdD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (123/97); total (124/97) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
Only 100 of 234 total aligned reads displayed.
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGT > NC_000913/1107209‑1107388
|
tgAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACcgca < 1:4033116/93‑1 (MQ=255)
tgAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACcgca < 1:4512316/93‑1 (MQ=255)
tgAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACcgca > 1:5367621/1‑93 (MQ=255)
gAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAt > 1:2144747/1‑93 (MQ=255)
aaCCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAtt < 2:5283921/93‑1 (MQ=255)
aCCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTc > 1:2332247/1‑93 (MQ=255)
agatagatAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCAcc > 2:1895571/1‑93 (MQ=255)
agatagatAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTAAcc > 1:2103555/1‑93 (MQ=255)
gatagataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCa > 1:984780/1‑93 (MQ=255)
tagataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATc < 1:1409592/93‑1 (MQ=255)
gataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCca > 2:597464/1‑93 (MQ=255)
ataAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcac > 1:3307652/1‑93 (MQ=255)
taAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCcaca > 1:2430977/1‑93 (MQ=255)
aaaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAg < 2:4613138/93‑1 (MQ=255)
aaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGa < 1:2509512/93‑1 (MQ=255)
aaCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGa > 1:194041/1‑93 (MQ=255)
aCAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAc < 2:2529279/93‑1 (MQ=255)
cAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAcc < 2:5104662/93‑1 (MQ=255)
cAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAcc > 2:2716089/1‑93 (MQ=255)
aGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCg < 2:3854602/93‑1 (MQ=255)
aGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCg > 2:5473950/1‑93 (MQ=255)
cGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAg < 1:2648071/93‑1 (MQ=255)
cGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAg < 2:2277309/93‑1 (MQ=255)
cGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAg < 2:580349/93‑1 (MQ=255)
tGCGTTAACAAAATAAGTCTCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAc > 1:4211703/1‑93 (MQ=255)
tGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAc > 1:671256/1‑93 (MQ=255)
tGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAc > 1:5494400/1‑93 (MQ=255)
gCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAcc < 1:1160213/93‑1 (MQ=255)
gTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAt > 1:3794712/1‑93 (MQ=255)
gTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAt < 2:3996003/93‑1 (MQ=255)
gTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAt < 1:2034509/93‑1 (MQ=255)
ttAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATg > 2:1780431/1‑93 (MQ=255)
aaCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGt > 1:628915/1‑93 (MQ=255)
aCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTg > 1:100987/1‑93 (MQ=255)
aCAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTg > 1:5149701/1‑93 (MQ=255)
aaaaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAt < 1:52065/93‑1 (MQ=255)
aaaTAAGTCACCCGCGCTGGCTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATc < 1:5006187/93‑1 (MQ=255)
aaaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATc < 2:3734478/93‑1 (MQ=255)
aaTAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCa > 2:4869907/1‑93 (MQ=255)
tAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCAcc < 2:1293085/93‑1 (MQ=255)
aaGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCg > 1:2284298/1‑93 (MQ=255)
aGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGa < 2:572686/93‑1 (MQ=255)
gTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGAc < 1:4714362/93‑1 (MQ=255)
gTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGAc < 2:2391261/93‑1 (MQ=255)
cACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTc < 2:2368002/93‑1 (MQ=255)
aCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCg < 2:5632802/93‑1 (MQ=255)
aCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCg > 2:4470932/1‑93 (MQ=255)
aCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCg > 2:116968/1‑93 (MQ=255)
cccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCgg > 2:4026041/1‑93 (MQ=255)
cccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCgg > 1:1663498/1‑93 (MQ=255)
ccGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGt < 1:3521924/93‑1 (MQ=255)
gcgcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGttt < 2:2499437/93‑1 (MQ=255)
gcgcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGttt > 1:3969555/1‑93 (MQ=255)
gcgcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGctt > 2:2572768/1‑93 (MQ=255)
gcgcTGACTAGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGttt < 2:422130/93‑1 (MQ=255)
gcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCg < 2:591186/93‑1 (MQ=255)
gcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCg > 1:5619437/1‑93 (MQ=255)
gcTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCg > 2:622302/1‑93 (MQ=255)
cTGACTGGAAGATAAGCAAACGGTGACCAAAGGAGAAGGCCGCCTTAACCATCCACAGACCGAGGACCATGGTGATCACCGGCTCGGTTTCGt < 1:3234257/93‑1 (MQ=255)
tGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTa > 1:287330/1‑93 (MQ=255)
tGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATc > 1:3180146/1‑93 (MQ=255)
ggAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATcc > 2:1360956/1‑93 (MQ=255)
ggAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATcc < 2:1140395/93‑1 (MQ=255)
ggAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATcc < 1:6015300/93‑1 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCa > 1:2012837/1‑93 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCa > 2:3756149/1‑93 (MQ=255)
gAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGCGATCACCGACTCGGTTTCGTACATCCa > 2:277497/1‑93 (MQ=255)
gTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGc > 1:5311595/1‑93 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAt > 1:1369373/1‑93 (MQ=255)
tAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAt < 2:650733/93‑1 (MQ=255)
aaGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATc < 1:439545/93‑1 (MQ=255)
aGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCg > 1:5729502/1‑93 (MQ=255)
cAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGcc < 2:538423/93‑1 (MQ=255)
cAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGcc > 2:3074901/1‑93 (MQ=255)
aaaCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCa > 2:1737085/1‑93 (MQ=255)
aaCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATGGCCAc < 1:1197075/93‑1 (MQ=255)
aaCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCAc > 2:3307743/1‑93 (MQ=255)
aCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACt > 2:3169690/1‑93 (MQ=255)
aCGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACt < 2:3692340/93‑1 (MQ=255)
gTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGcc < 1:2404793/93‑1 (MQ=255)
gTGGCCAAAGGAGAAGACCGCATACACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGcc > 2:5072622/1‑93 (MQ=255)
ggCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCAt < 2:1792321/93‑1 (MQ=255)
ggCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCAt > 2:3280999/1‑93 (MQ=255)
ggCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCAt < 2:3080053/93‑1 (MQ=255)
gCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATa < 2:4333100/93‑1 (MQ=255)
cAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgc < 2:893634/93‑1 (MQ=255)
cAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgc > 2:346317/1‑93 (MQ=255)
aaGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAgcgc < 1:6266209/93‑1 (MQ=255)
aGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCt < 2:4732147/93‑1 (MQ=255)
aGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCt > 1:4111452/1‑93 (MQ=255)
ggAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTg < 1:782592/93‑1 (MQ=255)
gagaAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTgg < 1:6042032/93‑1 (MQ=255)
gaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGtt > 2:4666242/1‑93 (MQ=255)
gaagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGtt < 1:3409388/93‑1 (MQ=255)
aagaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTg > 1:3595821/1‑93 (MQ=255)
agaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGa < 1:4178887/93‑1 (MQ=255)
agaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGa > 2:1655690/1‑93 (MQ=255)
agaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGa < 2:1396375/93‑1 (MQ=255)
gaCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTGCATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAg > 2:1685505/1‑93 (MQ=255)
aCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGt > 2:287807/1‑93 (MQ=255)
|
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGT > NC_000913/1107209‑1107388
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTA > NC_000913/1107206‑1107389
|
TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCG > SRR4302533.3715026/1‑94 (MQ=60)
GTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCA > SRR4302533.5399867/1‑94 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT < SRR4302533.4539639/94‑1 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT < SRR4302533.4057666/94‑1 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT < SRR4302533.4041937/94‑1 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCAT > SRR4302533.2157958/1‑94 (MQ=60)
TGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGGGGCCAAAGGAGAAGACCGCAT > SRR4302533.5238208/1‑94 (MQ=60)
AACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTC > SRR4302533.305251/1‑94 (MQ=60)
AACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTC > SRR4302533.2346687/1‑94 (MQ=60)
ACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCA > SRR4302533.5607148/1‑94 (MQ=60)
CCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCAC < SRR4302533.6076769/94‑1 (MQ=60)
CAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACC > SRR4302533.5091214/1‑94 (MQ=60)
CAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTAACC > SRR4302533.2116524/1‑94 (MQ=60)
AGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCA > SRR4302533.990549/1‑94 (MQ=60)
ATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATC > SRR4302533.5325817/1‑94 (MQ=60)
TAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCC < SRR4302533.1418114/94‑1 (MQ=60)
AGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCA > SRR4302533.4355430/1‑94 (MQ=60)
GATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCAC > SRR4302533.3328077/1‑94 (MQ=60)
GATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCAC > SRR4302533.520560/1‑94 (MQ=60)
ATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACA > SRR4302533.2446002/1‑94 (MQ=60)
AAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGA > SRR4302533.195267/1‑94 (MQ=60)
AACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAC < SRR4302533.3263497/94‑1 (MQ=60)
AACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAC < SRR4302533.115817/94‑1 (MQ=60)
AACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGAC < SRR4302533.2524973/94‑1 (MQ=60)
ACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACC < SRR4302533.1167322/94‑1 (MQ=60)
CAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCG > SRR4302533.2987979/1‑94 (MQ=60)
CAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCG < SRR4302533.754400/94‑1 (MQ=60)
GCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG < SRR4302533.63826/94‑1 (MQ=60)
GCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG < SRR4302533.6253084/94‑1 (MQ=60)
GCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAG < SRR4302533.674734/94‑1 (MQ=60)
CGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGG < SRR4302533.2664339/94‑1 (MQ=60)
GATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGA < SRR4302533.6308160/94‑1 (MQ=60)
ATGCGTTAACAAAATAAGTCTCCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302533.4237180/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302533.4501142/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302533.675220/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302533.1404791/1‑94 (MQ=60)
ATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGAC > SRR4302533.5527545/1‑94 (MQ=60)
TGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACC < SRR4302533.2430979/94‑1 (MQ=60)
TGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACC > SRR4302533.4146352/1‑94 (MQ=60)
GCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCA < SRR4302533.1167176/94‑1 (MQ=60)
GCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCA < SRR4302533.6059418/94‑1 (MQ=60)
CGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT > SRR4302533.3817934/1‑94 (MQ=60)
CGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT > SRR4302533.5352858/1‑94 (MQ=60)
CGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCAT < SRR4302533.40734/94‑1 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG > SRR4302533.3207679/1‑94 (MQ=60)
GTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATG < SRR4302533.2047060/94‑1 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT < SRR4302533.1776341/94‑1 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT > SRR4302533.60014/1‑94 (MQ=60)
TAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGT > SRR4302533.632616/1‑94 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG < SRR4302533.3478208/94‑1 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG > SRR4302533.101615/1‑94 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTG > SRR4302533.5180814/1‑94 (MQ=60)
AACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCA‑CATCCACAGACCGAGGACCATGGTGA > SRR4302533.3352692/1‑94 (MQ=60)
CAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAT > SRR4302533.490901/1‑94 (MQ=60)
CAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGAT > SRR4302533.2568486/1‑94 (MQ=60)
AAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATC < SRR4302533.52416/94‑1 (MQ=60)
AAATAAGTCACCCGCGCTGGCTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCA < SRR4302533.5036523/94‑1 (MQ=60)
AAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCA > SRR4302533.369746/1‑94 (MQ=60)
AAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCA > SRR4302533.2475887/1‑94 (MQ=60)
AAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCA < SRR4302533.1911102/94‑1 (MQ=60)
AATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCAC > SRR4302533.811598/1‑94 (MQ=60)
TAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCG > SRR4302533.2298436/1‑94 (MQ=60)
AAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGA > SRR4302533.1002426/1‑94 (MQ=60)
GTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACT < SRR4302533.4742934/94‑1 (MQ=60)
CACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCG > SRR4302533.2779806/1‑94 (MQ=60)
ACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGG > SRR4302533.1673553/1‑94 (MQ=60)
CCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTT < SRR4302533.3543632/94‑1 (MQ=60)
CGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTT > SRR4302533.3993732/1‑94 (MQ=60)
CGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCG > SRR4302533.5653401/1‑94 (MQ=60)
CTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTA > SRR4302533.289088/1‑94 (MQ=60)
CTGACTGGAAGATAAGCAAACGGTGACCAAAGGAGAAGGCCGCCTTAACCATCCACAGACCGAGGACCATGGTGATCACCGGCTCGGTTTCGTA < SRR4302533.3254185/94‑1 (MQ=60)
TGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTAC > SRR4302533.2379997/1‑94 (MQ=60)
ACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACAT < SRR4302533.1261696/94‑1 (MQ=60)
ACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACAT > SRR4302533.2330371/1‑94 (MQ=60)
CTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATC > SRR4302533.3199709/1‑94 (MQ=60)
CTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATC > SRR4302533.1318948/1‑94 (MQ=60)
GGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCA > SRR4302533.2025235/1‑94 (MQ=60)
GGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCA > SRR4302533.2025236/1‑94 (MQ=60)
GGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCA < SRR4302533.6051752/94‑1 (MQ=60)
AAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGG < SRR4302533.5656316/94‑1 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC < SRR4302533.333795/94‑1 (MQ=60)
AGTTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGC > SRR4302533.5343427/1‑94 (MQ=60)
TTAAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCAT > SRR4302533.1377604/1‑94 (MQ=60)
TAAGCAAACGGTGGCCAAAGGAGAAGGCCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATC < SRR4302533.5475788/94‑1 (MQ=60)
AAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCG < SRR4302533.442167/94‑1 (MQ=60)
AAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCG > SRR4302533.5764099/1‑94 (MQ=60)
AAGCAAACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCG > SRR4302533.2169625/1‑94 (MQ=60)
AACGGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATGGCCACT < SRR4302533.1204266/94‑1 (MQ=60)
GGTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCC > SRR4302533.2490647/1‑94 (MQ=60)
GTGGCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCA < SRR4302533.2419643/94‑1 (MQ=60)
GCCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAG > SRR4302533.4353536/1‑94 (MQ=60)
CCAAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGC > SRR4302533.5566828/1‑94 (MQ=60)
CAAAGGAGAAGACCGCATTCGCCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCG < SRR4302533.37164/94‑1 (MQ=60)
AAAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGC > SRR4302533.2133303/1‑94 (MQ=60)
AAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCT > SRR4302533.423317/1‑94 (MQ=60)
AAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCT > SRR4302533.4136444/1‑94 (MQ=60)
AAGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCT < SRR4302533.6303652/94‑1 (MQ=60)
AGGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTG > SRR4302533.4672251/1‑94 (MQ=60)
GGAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGG < SRR4302533.787195/94‑1 (MQ=60)
GAGAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGT < SRR4302533.6078642/94‑1 (MQ=60)
GAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTG > SRR4302533.3617943/1‑94 (MQ=60)
GAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTG < SRR4302533.3430447/94‑1 (MQ=60)
GAAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTG < SRR4302533.1632952/94‑1 (MQ=60)
AAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCTCCACTGCCATAGCGCTGGTTGA > SRR4302533.2116481/1‑94 (MQ=60)
AAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGA < SRR4302533.3550845/94‑1 (MQ=60)
AAGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGA > SRR4302533.2028965/1‑94 (MQ=60)
AGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAG > SRR4302533.2048769/1‑94 (MQ=60)
AGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAG < SRR4302533.4204201/94‑1 (MQ=60)
AGACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAG > SRR4302533.2335527/1‑94 (MQ=60)
GACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGT < SRR4302533.4928717/94‑1 (MQ=60)
GACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGT < SRR4302533.3977776/94‑1 (MQ=60)
ACCGCATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTA > SRR4302533.4394594/1‑94 (MQ=60)
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TGGTGAACCAGATAGATAAACAGCGATGCGTTAACAAAATAAGTCACCCGCGCTGACTGGAAGTTAAGCAAACGGTGGCCAAAGGAGAAGACCACATTCACCATCCACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTA > NC_000913/1107206‑1107389
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
