Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,117,607	A→G	G31G (GGT→GGC)	yceI ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,117,607	0	A	G	99.7%	1035.1 / NA	322	G31G (GGT→GGC)	yceI	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (142/179); minor base T (0/1); total (142/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 331 total aligned reads displayed.

AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT  >  NC_000913/1117517‑1117696

aaaGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGcc                                                                                         <  1:10037338/93‑1 (MQ=255)

  aGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCctt                                                                                       >  2:3567459/1‑93 (MQ=255)

    gTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttct                                                                                     <  1:4846397/93‑1 (MQ=255)

     tAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAGCAAAGGCGTGCTGGCcttctt                                                                                    >  2:4370654/1‑93 (MQ=255)

     tAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttctt                                                                                    <  1:4917873/93‑1 (MQ=255)

     tAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttctt                                                                                    >  1:7916345/1‑93 (MQ=255)

     tAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttctt                                                                                    <  1:7655893/93‑1 (MQ=255)

          gTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCa                                                                               <  2:6262437/93‑1 (MQ=255)

          gTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCa                                                                               <  1:4374582/93‑1 (MQ=255)

           tACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCaa                                                                              <  2:378443/93‑1 (MQ=255)

           tACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCaa                                                                              <  2:5207072/93‑1 (MQ=255)

           tACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCaa                                                                              <  2:6961826/93‑1 (MQ=255)

           tACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCaa                                                                              <  1:5348560/93‑1 (MQ=255)

             ccGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAtt                                                                            <  2:8744850/93‑1 (MQ=255)

               gTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAtttt                                                                          >  2:2608642/1‑93 (MQ=255)

               gTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAtttt                                                                          >  1:5214052/1‑93 (MQ=255)

                 cGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGt                                                                        <  1:2746854/93‑1 (MQ=255)

                    aaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAt                                                                     >  2:6632632/1‑93 (MQ=255)

                    aaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAt                                                                     >  2:9545731/1‑93 (MQ=255)

                    aaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAt                                                                     <  1:249876/93‑1 (MQ=255)

                     aTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATc                                                                    <  2:285139/93‑1 (MQ=255)

                     aTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATc                                                                    >  1:6811898/1‑93 (MQ=255)

                      tCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcg                                                                   <  1:6400033/93‑1 (MQ=255)

                      tCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcg                                                                   >  1:397397/1‑93 (MQ=255)

                      tCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcg                                                                   >  1:1778186/1‑93 (MQ=255)

                      tCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcg                                                                   <  1:731260/93‑1 (MQ=255)

                       cTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATctg                                                                  >  1:1555205/1‑91 (MQ=255)

                       cTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcgg                                                                  <  2:234653/93‑1 (MQ=255)

                              ggTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAc                                                           >  1:1325228/1‑93 (MQ=255)

                               gTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAcc                                                          >  2:7989252/1‑93 (MQ=255)

                                tGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCg                                                         >  1:7045963/1‑93 (MQ=255)

                                  ccGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCt                                                       >  1:7424254/1‑93 (MQ=255)

                                    gTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGa                                                     >  2:1335910/1‑93 (MQ=255)

                                     tataACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGaa                                                    >  1:8999077/1‑93 (MQ=255)

                                     tataACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGaa                                                    >  1:9375827/1‑93 (MQ=255)

                                      ataACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAc                                                   <  2:4205999/93‑1 (MQ=255)

                                       taACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAcc                                                  >  2:4488513/1‑93 (MQ=255)

                                       taACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAcc                                                  >  1:8500424/1‑93 (MQ=255)

                                        aaCCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCg                                                 <  2:7470717/93‑1 (MQ=255)

                                        aaCCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCg                                                 >  1:5624874/1‑93 (MQ=255)

                                         aCCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCgg                                                <  2:329477/93‑1 (MQ=255)

                                         aCCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCgg                                                <  2:309050/93‑1 (MQ=255)

                                          ccAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGc                                               <  2:5885964/93‑1 (MQ=255)

                                            aGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCag                                             >  2:7336348/1‑93 (MQ=255)

                                            aGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCag                                             <  1:1451184/93‑1 (MQ=255)

                                             gCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCaga                                            >  2:2986618/1‑93 (MQ=255)

                                               tataGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAgaga                                          >  2:1522219/1‑93 (MQ=255)

                                                ataGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGaa                                         <  1:9131097/93‑1 (MQ=255)

                                                ataGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGaa                                         >  2:9835948/1‑93 (MQ=255)

                                                 taGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAAc                                        >  2:6777792/1‑93 (MQ=255)

                                                  aGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACa                                       <  2:841123/93‑1 (MQ=255)

                                                  aGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACa                                       <  2:1426404/93‑1 (MQ=255)

                                                   gCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACAt                                      <  1:8426610/93‑1 (MQ=255)

                                                    ccAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATc                                     <  2:4457944/93‑1 (MQ=255)

                                                     cAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCa                                    <  2:2172225/93‑1 (MQ=255)

                                                      aaGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAg                                   >  2:5380823/1‑93 (MQ=255)

                                                      aaGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAg                                   <  2:8153331/93‑1 (MQ=255)

                                                        ggTGCTGGATGCGGAAATTAACAGAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAggg                                 <  2:5520921/93‑1 (MQ=255)

                                                          tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc                               >  1:3723709/1‑93 (MQ=255)

                                                          tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc                               >  1:8277662/1‑93 (MQ=255)

                                                          tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc                               >  2:7664995/1‑93 (MQ=255)

                                                          tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc                               <  1:1978415/93‑1 (MQ=255)

                                                            cTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcgc                             <  2:5968637/93‑1 (MQ=255)

                                                            cTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcgc                             <  1:9650506/93‑1 (MQ=255)

                                                             tGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTTAAGCGGCAGAGAACATCAGGGAcgcg                            >  2:4791926/1‑93 (MQ=255)

                                                             tGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcgcg                            >  2:5126717/1‑93 (MQ=255)

                                                             tGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcgcg                            >  2:10018301/1‑93 (MQ=255)

                                                              ggATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGa                           >  2:8220168/1‑93 (MQ=255)

                                                               gATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGAAACCGCTGAACCGGCAGAGAACATCAGGGACGCGaa                          >  2:8905087/1‑93 (MQ=255)

                                                                 tGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAgg                        <  2:8547597/93‑1 (MQ=255)

                                                                 tGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAgg                        <  1:9733824/93‑1 (MQ=255)

                                                                  gCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGt                       <  2:389772/93‑1 (MQ=255)

                                                                  gCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGt                       <  1:7184201/93‑1 (MQ=255)

                                                                   cGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGtt                      <  2:1977444/93‑1 (MQ=255)

                                                                   cGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGtt                      <  2:5817887/93‑1 (MQ=255)

                                                                    ggAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTa                     <  1:3277276/93‑1 (MQ=255)

                                                                     gAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTaa                    >  1:886324/1‑93 (MQ=255)

                                                                     gAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGAAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTaa                    <  1:7116298/93‑1 (MQ=255)

                                                                       aaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAc                  >  2:9293770/1‑93 (MQ=255)

                                                                       aaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAc                  <  1:3084272/93‑1 (MQ=255)

                                                                       aaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAc                  >  1:4622163/1‑93 (MQ=255)

                                                                        aTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAcc                 >  2:9093156/1‑93 (MQ=255)

                                                                        aTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAcc                 <  1:612037/93‑1 (MQ=255)

                                                                         ttAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCa                <  2:9969384/93‑1 (MQ=255)

                                                                          tAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCaa               <  1:4158846/93‑1 (MQ=255)

                                                                            aacaaGGCGGGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGc             <  2:7900052/90‑1 (MQ=255)

                                                                            aCAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGc             <  1:7991092/93‑1 (MQ=255)

                                                                              aaaGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAg           <  2:633230/93‑1 (MQ=255)

                                                                                 ggCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAggat        >  1:3409907/1‑91 (MQ=255)

                                                                                 ggCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCt        <  1:6714821/93‑1 (MQ=255)

                                                                                  gCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtt       >  1:3522529/1‑93 (MQ=255)

                                                                                  gCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtt       <  1:6663576/93‑1 (MQ=255)

                                                                                  gCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtt       <  1:8817795/93‑1 (MQ=255)

                                                                                   tgTGCTGGGCTTCTTTGTCAATTTTGTAAGCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttt      <  1:5509367/92‑1 (MQ=255)

                                                                                   cGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttt      >  2:1677653/1‑93 (MQ=255)

                                                                                    gTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttt     >  1:5057079/1‑93 (MQ=255)

                                                                                    gTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttt     >  1:5922925/1‑93 (MQ=255)

                                                                                    gTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttt     >  2:9693412/1‑93 (MQ=255)

                                                                                     tGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTATACCAAGCAGGCttttt    >  1:9942408/1‑93 (MQ=255)

                                                                                     tGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttttt    >  1:2110839/1‑93 (MQ=255)

AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT  >  NC_000913/1117517‑1117696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT  >  NC_000913/1117514‑1117700

GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGG                                                                                               >  SRR4302540.3730577/1‑94 (MQ=60)

GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGG                                                                                               <  SRR4302540.9141624/94‑1 (MQ=60)

GACAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGG                                                                                               <  SRR4302540.5327235/94‑1 (MQ=60)

 TCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGC                                                                                              >  SRR4302540.2791517/1‑94 (MQ=60)

 TCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGC                                                                                              >  SRR4302540.1708708/1‑94 (MQ=60)

 TCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGC                                                                                              >  SRR4302540.8890293/1‑94 (MQ=60)

  CAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCC                                                                                             <  SRR4302540.5605541/94‑1 (MQ=60)

   AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCT                                                                                            <  SRR4302540.7754433/94‑1 (MQ=60)

   AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCT                                                                                            <  SRR4302540.3946464/94‑1 (MQ=60)

   AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCT                                                                                            <  SRR4302540.10154061/94‑1 (MQ=60)

    AAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTT                                                                                           >  SRR4302540.9573142/1‑94 (MQ=60)

     AGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTC                                                                                          <  SRR4302540.1479946/94‑1 (MQ=60)

      GGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCT                                                                                         >  SRR4302540.5596933/1‑94 (MQ=60)

       GTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTT                                                                                        >  SRR4302540.8008634/1‑94 (MQ=60)

       GTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTT                                                                                        <  SRR4302540.4898316/94‑1 (MQ=60)

        TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT                                                                                       >  SRR4302540.8035375/1‑94 (MQ=60)

        TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT                                                                                       <  SRR4302540.10014378/94‑1 (MQ=60)

        TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT                                                                                       <  SRR4302540.7742091/94‑1 (MQ=60)

        TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT                                                                                       <  SRR4302540.4970836/94‑1 (MQ=60)

         AAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTG                                                                                      <  SRR4302540.6007635/94‑1 (MQ=60)

           AAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTC                                                                                    >  SRR4302540.2571016/1‑94 (MQ=60)

            AGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCA                                                                                   <  SRR4302540.7437807/94‑1 (MQ=60)

            AGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCA                                                                                   >  SRR4302540.8564191/1‑94 (MQ=60)

             GTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAA                                                                                  <  SRR4302540.4422091/94‑1 (MQ=60)

             ATACCGTCGAAATCTTTAAAGGTGCCGTATAACCATCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGTCCTTCTTTGTCAA                                                                                  <  SRR4302540.3262407/94‑1 (MQ=60)

              TACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAT                                                                                 <  SRR4302540.2080651/94‑1 (MQ=60)

              TACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAT                                                                                 <  SRR4302540.5407245/94‑1 (MQ=60)

              TACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGACAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAT                                                                                 >  SRR4302540.6123732/1‑94 (MQ=60)

               ACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATT                                                                                <  SRR4302540.1785/94‑1 (MQ=60)

                CCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTT                                                                               >  SRR4302540.7050807/1‑94 (MQ=60)

                 CGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTT                                                                              >  SRR4302540.871401/1‑94 (MQ=60)

                 CGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTT                                                                              >  SRR4302540.5270870/1‑94 (MQ=60)

                 CGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTT                                                                              >  SRR4302540.5271115/1‑94 (MQ=60)

                    CGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTA                                                                           <  SRR4302540.8469075/94‑1 (MQ=60)

                    CGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTA                                                                           >  SRR4302540.1298528/1‑94 (MQ=60)

                    CGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTA                                                                           <  SRR4302540.2776522/94‑1 (MQ=60)

                     GAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTTA                                                                          >  SRR4302540.5740370/1‑94 (MQ=60)

                     GAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAA                                                                          <  SRR4302540.2886628/94‑1 (MQ=60)

                     GAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAA                                                                          >  SRR4302540.7796346/1‑94 (MQ=60)

                      AAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAT                                                                         <  SRR4302540.4867754/94‑1 (MQ=60)

                       AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC                                                                        >  SRR4302540.6887268/1‑94 (MQ=60)

                       AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC                                                                        <  SRR4302540.5448228/94‑1 (MQ=60)

                       AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC                                                                        <  SRR4302540.252295/94‑1 (MQ=60)

                        ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG                                                                       >  SRR4302540.1797492/1‑94 (MQ=60)

                        ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG                                                                       <  SRR4302540.2210566/94‑1 (MQ=60)

                        ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG                                                                       >  SRR4302540.401520/1‑94 (MQ=60)

                        ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG                                                                       <  SRR4302540.900927/94‑1 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCTG                                                                      >  SRR4302540.1572308/1‑94 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      <  SRR4302540.739087/94‑1 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      <  SRR4302540.8890800/94‑1 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      <  SRR4302540.393777/94‑1 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      >  SRR4302540.3526453/1‑94 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      <  SRR4302540.2717179/94‑1 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      >  SRR4302540.987206/1‑94 (MQ=60)

                         TCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGG                                                                      <  SRR4302540.6471275/94‑1 (MQ=60)

                          CTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGC                                                                     <  SRR4302540.9251092/94‑1 (MQ=60)

                           TTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCG                                                                    <  SRR4302540.3563549/94‑1 (MQ=60)

                              AAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCA                                                                 >  SRR4302540.9835687/1‑94 (MQ=60)

                               AAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAA                                                                <  SRR4302540.3262737/94‑1 (MQ=60)

                                AGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAC                                                               >  SRR4302540.1339051/1‑94 (MQ=60)

                                 GGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACC                                                              >  SRR4302540.5223662/1‑94 (MQ=60)

                                 GGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACC                                                              <  SRR4302540.4911715/94‑1 (MQ=60)

                                 GGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACC                                                              <  SRR4302540.1438135/94‑1 (MQ=60)

                                  GTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCG                                                             >  SRR4302540.7124313/1‑94 (MQ=60)

                                  GTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCG                                                             >  SRR4302540.7124314/1‑94 (MQ=60)

                                  GTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCG                                                             <  SRR4302540.1795082/94‑1 (MQ=60)

                                   TGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGC                                                            >  SRR4302540.7330376/1‑94 (MQ=60)

                                   TGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGC                                                            >  SRR4302540.8266681/1‑94 (MQ=60)

                                   TGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGC                                                            <  SRR4302540.2392608/94‑1 (MQ=60)

                                    GCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCT                                                           >  SRR4302540.7506957/1‑94 (MQ=60)

                                    GCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCT                                                           >  SRR4302540.7506958/1‑94 (MQ=60)

                                     CCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTG                                                          >  SRR4302540.9142006/1‑94 (MQ=60)

                                     CCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTG                                                          <  SRR4302540.9936312/94‑1 (MQ=60)

                                     CCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTG                                                          <  SRR4302540.4232317/94‑1 (MQ=60)

                                      CGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGA                                                         >  SRR4302540.9477043/1‑94 (MQ=60)

                                       GTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAA                                                        >  SRR4302540.9487438/1‑94 (MQ=60)

                                       GTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAA                                                        >  SRR4302540.9107039/1‑94 (MQ=60)

                                        TATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAC                                                       <  SRR4302540.4094150/94‑1 (MQ=60)

                                         ATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACC                                                      <  SRR4302540.3499503/94‑1 (MQ=60)

                                         ATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACC                                                      >  SRR4302540.8599198/1‑94 (MQ=60)

                                         ATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACC                                                      >  SRR4302540.3340379/1‑94 (MQ=60)

                                         ATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTATCAATTTTGTAATCGGCGGCAACCGCTGAACC                                                      >  SRR4302540.8599199/1‑94 (MQ=60)

                                          TAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCG                                                     >  SRR4302540.5686776/1‑94 (MQ=60)

                                          TAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCG                                                     >  SRR4302540.9640677/1‑94 (MQ=60)

                                           AACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGG                                                    <  SRR4302540.554385/94‑1 (MQ=60)

                                             CCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCA                                                  >  SRR4302540.1587500/1‑94 (MQ=60)

                                              CAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAG                                                 <  SRR4302540.6814404/94‑1 (MQ=60)

                                               AGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGA                                                <  SRR4302540.1466960/94‑1 (MQ=60)

                                                GCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAG                                               <  SRR4302540.4167401/94‑1 (MQ=60)

                                                  TATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAA                                             <  SRR4302540.8951130/94‑1 (MQ=60)

                                                   ATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAAC                                            <  SRR4302540.9240839/94‑1 (MQ=60)

                                                     AGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACAT                                          >  SRR4302540.3679985/1‑94 (MQ=60)

                                                      GCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATC                                         <  SRR4302540.8524434/94‑1 (MQ=60)

                                                       CCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCG                                        >  SRR4302540.7470094/1‑94 (MQ=60)

                                                       CCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCA                                        <  SRR4302540.4946681/94‑1 (MQ=60)

                                                       CCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCA                                        <  SRR4302540.6850774/94‑1 (MQ=60)

                                                        CAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAG                                       >  SRR4302540.5035686/1‑94 (MQ=60)

                                                         AAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGG                                      <  SRR4302540.5369470/94‑1 (MQ=60)

                                                         AAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTGCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGG                                      <  SRR4302540.7627333/94‑1 (MQ=60)

                                                          AGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGG                                     >  SRR4302540.7275003/1‑94 (MQ=60)

                                                            GTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAC                                   >  SRR4302540.8373812/1‑94 (MQ=60)

                                                            GTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAC                                   >  SRR4302540.3764333/1‑94 (MQ=60)

                                                             TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG                                  >  SRR4302540.7550250/1‑94 (MQ=60)

                                                             TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG                                  <  SRR4302540.1999879/94‑1 (MQ=60)

                                                              GCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGC                                 >  SRR4302540.4348899/1‑94 (MQ=60)

                                                               CTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCG                                >  SRR4302540.4443562/1‑94 (MQ=60)

                                                               CTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCG                                <  SRR4302540.9764141/94‑1 (MQ=60)

                                                                  GATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAG                             <  SRR4302540.2211829/94‑1 (MQ=60)

                                                                  GATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAG                             <  SRR4302540.3012362/94‑1 (MQ=60)

                                                                  GATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAG                             <  SRR4302540.1531433/94‑1 (MQ=60)

                                                                  GATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAG                             <  SRR4302540.8214820/94‑1 (MQ=60)

                                                                  GATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGAAGAGAACATCAGGGACGCGAAG                             <  SRR4302540.6777366/94‑1 (MQ=60)

                                                                    TGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGT                           <  SRR4302540.9143158/94‑1 (MQ=60)

                                                                    TGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGT                           <  SRR4302540.9848121/94‑1 (MQ=60)

                                                                    TGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCGGAACCGGCAGAGAACATCAGGGGCGCGAAGGT                           <  SRR4302540.933037/94‑1 (MQ=60)

                                                                     GCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTT                          <  SRR4302540.7264290/94‑1 (MQ=60)

                                                                     GCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTT                          <  SRR4302540.6552964/94‑1 (MQ=60)

                                                                     GCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTT                          <  SRR4302540.5017475/94‑1 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        >  SRR4302540.9783214/1‑94 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        <  SRR4302540.4505789/94‑1 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        <  SRR4302540.3313069/94‑1 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        <  SRR4302540.5525904/94‑1 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        <  SRR4302540.7010962/94‑1 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        >  SRR4302540.895726/1‑94 (MQ=60)

                                                                       GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA                        <  SRR4302540.6799641/94‑1 (MQ=60)

                                                                        GAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAA                       <  SRR4302540.7263275/94‑1 (MQ=60)

                                                                        GAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGAAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAA                       <  SRR4302540.7195518/94‑1 (MQ=60)

                                                                         AAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAC                      >  SRR4302540.4671707/1‑94 (MQ=60)

                                                                         AAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAC                      <  SRR4302540.1892994/94‑1 (MQ=60)

                                                                         AAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAC                      >  SRR4302540.6767906/1‑94 (MQ=60)

                                                                         AAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAC                      >  SRR4302540.5619713/1‑94 (MQ=60)

                                                                          AATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACC                     >  SRR4302540.4690878/1‑94 (MQ=60)

                                                                          AATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACC                     <  SRR4302540.3118116/94‑1 (MQ=60)

                                                                           ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCA                    <  SRR4302540.618575/94‑1 (MQ=60)

                                                                           ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCA                    >  SRR4302540.8050164/1‑94 (MQ=60)

                                                                           ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCA                    >  SRR4302540.7172340/1‑94 (MQ=60)

                                                                             TAACAAAGGCGTGGTGGCCTTCTTTGTCCATTTTGTCATCGGCGGCAACCGCTGAACCGGCAGAGCACATCCGGGCCGCGAAGGTTACACCACG                  >  SRR4302540.8198145/1‑94 (MQ=60)

                                                                             TAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAG                  >  SRR4302540.7248384/1‑94 (MQ=60)

                                                                             TAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAG                  >  SRR4302540.6266259/1‑94 (MQ=60)

                                                                             TAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAG                  <  SRR4302540.4203914/94‑1 (MQ=60)

                                                                              AACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGC                 >  SRR4302540.6229165/1‑94 (MQ=60)

                                                                               ACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCA                <  SRR4302540.8084126/94‑1 (MQ=60)

                                                                                CAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAG               <  SRR4302540.8537861/94‑1 (MQ=60)

                                                                                 AAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGG              <  SRR4302540.5251735/94‑1 (MQ=60)

                                                                                  AAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGCCGCGAAGGTTAAACCAAGCAGGC             >  SRR4302540.6715180/1‑94 (MQ=60)

                                                                                  AAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGC             <  SRR4302540.1336599/94‑1 (MQ=60)

                                                                                   AGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCT            >  SRR4302540.3447047/1‑94 (MQ=60)

                                                                                   AGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCT            <  SRR4302540.3606427/94‑1 (MQ=60)

                                                                                   AGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGAT            >  SRR4302540.3447048/1‑94 (MQ=60)

                                                                                    GGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTT           <  SRR4302540.1959551/94‑1 (MQ=60)

                                                                                    GGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTT           <  SRR4302540.5039880/94‑1 (MQ=60)

                                                                                    GGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTT           <  SRR4302540.4543688/94‑1 (MQ=60)

                                                                                    GGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTT           <  SRR4302540.6788902/94‑1 (MQ=60)

                                                                                    GGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTT           >  SRR4302540.3560926/1‑94 (MQ=60)

                                                                                     GCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTT          <  SRR4302540.8919748/94‑1 (MQ=60)

                                                                                     GCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTT          <  SRR4302540.6737239/94‑1 (MQ=60)

                                                                                     GCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTT          <  SRR4302540.8374805/94‑1 (MQ=60)

                                                                                     GCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTT          <  SRR4302540.8919749/94‑1 (MQ=60)

                                                                                      CGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTT         >  SRR4302540.5111752/1‑94 (MQ=60)

                                                                                      CGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTT         <  SRR4302540.5945194/94‑1 (MQ=60)

                                                                                      CGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTT         >  SRR4302540.5988367/1‑94 (MQ=60)

                                                                                       GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTATACCAAGCAGGCTTTTT        >  SRR4302540.10058522/1‑94 (MQ=60)

                                                                                       GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTT        <  SRR4302540.6129177/94‑1 (MQ=60)

                                                                                       GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTT        >  SRR4302540.2133492/1‑94 (MQ=60)

                                                                                       GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTT        >  SRR4302540.7203421/1‑94 (MQ=60)

                                                                                       GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTT        >  SRR4302540.3308268/1‑94 (MQ=60)

                                                                                        TGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTT       >  SRR4302540.8969479/1‑94 (MQ=60)

                                                                                        TGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTT       <  SRR4302540.1451254/94‑1 (MQ=60)

                                                                                          CTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTC     >  SRR4302540.1616460/1‑94 (MQ=60)

                                                                                          CTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTC     <  SRR4302540.2019990/94‑1 (MQ=60)

                                                                                           TGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCA    <  SRR4302540.6217883/94‑1 (MQ=60)

                                                                                            GGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAT   <  SRR4302540.4376506/94‑1 (MQ=60)

                                                                                            GGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAT   <  SRR4302540.5324204/94‑1 (MQ=60)

                                                                                            GGCCTTCTGTGTCAATTTTGTAATCGGCGGCAACCGCTGACCCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCGTTTTTTCAT   <  SRR4302540.4376225/94‑1 (MQ=60)

                                                                                             GCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT  <  SRR4302540.2754427/94‑1 (MQ=60)

GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT  >  NC_000913/1117514‑1117700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`