Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,117,607 |
A→G |
G31G (GGT→GGC) |
yceI ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,117,607 | 0 | A | G | 100.0%
| 669.5
/ NA
| 206 | G31G (GGT→GGC) | yceI | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/98); total (108/98) |
Only 100 of 210 total aligned reads displayed.
AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT > NC_000913/1117517‑1117696
|
aaaGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGcc < 1:2027075/93‑1 (MQ=255)
aaGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCct > 1:5703677/1‑93 (MQ=255)
aGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCctt > 2:4232458/1‑93 (MQ=255)
gTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttct > 1:4578066/1‑93 (MQ=255)
gTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCcttct < 1:5080368/93‑1 (MQ=255)
aaaaGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCttt > 1:3053749/1‑93 (MQ=255)
aaaaGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCttt > 1:1874918/1‑93 (MQ=255)
tACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCaa > 2:4515368/1‑93 (MQ=255)
ccGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAtt > 1:6284680/1‑93 (MQ=255)
cGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAttt > 1:1950050/1‑93 (MQ=255)
gTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAAtttt > 1:5976745/1‑93 (MQ=255)
cGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAGTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGt < 1:5175425/93‑1 (MQ=255)
gAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTa > 2:3479823/1‑93 (MQ=255)
gAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTa > 2:5458901/1‑93 (MQ=255)
gAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTa > 2:5031872/1‑93 (MQ=255)
aaaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTaa < 1:2262333/93‑1 (MQ=255)
aaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAt > 2:5797559/1‑93 (MQ=255)
aaTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAt > 2:3319492/1‑93 (MQ=255)
aTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATc < 2:2099257/93‑1 (MQ=255)
aTCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATc < 2:4679051/93‑1 (MQ=255)
cTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcgg > 2:3960792/1‑93 (MQ=255)
cTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcgg > 2:5394389/1‑93 (MQ=255)
tttAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcggc < 1:784819/93‑1 (MQ=255)
tttAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcggc > 2:759653/1‑93 (MQ=255)
tAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcggcgg > 1:4166207/1‑93 (MQ=255)
tAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcggcgg > 2:1522569/1‑93 (MQ=255)
tAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATcggcgg < 1:3838265/93‑1 (MQ=255)
aaaGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCggcggc < 1:1666124/93‑1 (MQ=255)
aaaGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCggcggc < 1:771862/93‑1 (MQ=255)
aaaGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCggcggc < 2:6260263/93‑1 (MQ=255)
aGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCaa > 1:5311151/1‑93 (MQ=255)
aGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCaa > 2:3415370/1‑93 (MQ=255)
ggTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAc > 2:1883372/1‑93 (MQ=255)
ggTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAc > 2:168449/1‑93 (MQ=255)
gTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAcc > 1:966547/1‑93 (MQ=255)
tataACCAGCTATGGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGaa > 1:1485251/1‑93 (MQ=255)
tataACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGaa > 1:2883324/1‑93 (MQ=255)
ataACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAc < 2:3890739/93‑1 (MQ=255)
taACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAAcc < 1:3889577/93‑1 (MQ=255)
ccAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGc < 1:3232427/93‑1 (MQ=255)
ccAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGc > 2:3012138/1‑93 (MQ=255)
cAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCTGCAACCGCTGAACCGGCa < 2:6025736/93‑1 (MQ=255)
cAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCa > 2:6002988/1‑93 (MQ=255)
cAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCa > 1:4418091/1‑93 (MQ=255)
aGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCag > 2:3144743/1‑93 (MQ=255)
gCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCACTTTTGTAATCGGCGGCAACCGCTGAACCGGCaga > 2:3607514/1‑93 (MQ=255)
gCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCaga > 2:3727583/1‑93 (MQ=255)
gCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCaga > 1:351187/1‑93 (MQ=255)
tataGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAgaga > 1:5464324/1‑93 (MQ=255)
aGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACa < 1:4291382/93‑1 (MQ=255)
ccAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATc < 2:1973627/93‑1 (MQ=255)
aaGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAg > 2:4418562/1‑93 (MQ=255)
aGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAgg < 2:108361/93‑1 (MQ=255)
aGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAgg > 2:5206239/1‑93 (MQ=255)
aGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAgg < 2:4179105/93‑1 (MQ=255)
ggTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAggg > 1:117074/1‑93 (MQ=255)
gTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGa < 1:1118976/93‑1 (MQ=255)
gTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGa > 2:5492278/1‑93 (MQ=255)
tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc < 1:4080456/93‑1 (MQ=255)
tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc > 1:3953450/1‑93 (MQ=255)
tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc < 1:5539080/93‑1 (MQ=255)
tGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAc > 2:255542/1‑93 (MQ=255)
gCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcg < 2:158155/93‑1 (MQ=255)
gCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAcg > 2:2715330/1‑93 (MQ=255)
aTGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAg > 2:2778995/1‑93 (MQ=255)
aTGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAg < 1:4677457/93‑1 (MQ=255)
gCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGt > 1:4135167/1‑93 (MQ=255)
gCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGt < 2:4456757/93‑1 (MQ=255)
cGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGtt < 2:2615331/93‑1 (MQ=255)
cGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGtt < 1:2135244/93‑1 (MQ=255)
ggAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTa > 1:6178139/1‑93 (MQ=255)
ggAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTa > 1:5229233/1‑93 (MQ=255)
gAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTaa > 2:3260297/1‑93 (MQ=255)
aaaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTaaa < 1:57766/93‑1 (MQ=255)
aaaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTaaa < 2:2233620/93‑1 (MQ=255)
aaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAc > 2:6060234/1‑93 (MQ=255)
aaTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAc < 2:2334757/93‑1 (MQ=255)
aTTAGCAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAcc < 2:5959659/93‑1 (MQ=255)
aTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGGTAAAcc > 2:1248159/1‑93 (MQ=255)
ttAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAcaa > 1:2657688/1‑91 (MQ=255)
ttAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCa > 1:2313590/1‑93 (MQ=255)
tAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCaa > 1:1692364/1‑93 (MQ=255)
aaCAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAg < 1:5719638/93‑1 (MQ=255)
aCAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGc > 2:4981380/1‑93 (MQ=255)
aCAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGc > 2:5027096/1‑93 (MQ=255)
cAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCa > 1:3683892/1‑93 (MQ=255)
cAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCa < 1:3530668/93‑1 (MQ=255)
cAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCa < 1:494897/93‑1 (MQ=255)
aaaGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAg > 2:5084057/1‑93 (MQ=255)
aaaGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAg < 2:4012952/93‑1 (MQ=255)
aaGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAgg > 2:5272972/1‑93 (MQ=255)
aGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGc < 1:3558503/93‑1 (MQ=255)
ggCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAACAAGCAGGCt > 2:563377/1‑93 (MQ=255)
cGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttt < 2:478994/93‑1 (MQ=255)
gTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttt < 2:5703677/93‑1 (MQ=255)
tGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGGACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttttt > 2:652112/1‑93 (MQ=255)
tGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCttttt > 1:5040370/1‑93 (MQ=255)
gCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttttt < 2:6128987/93‑1 (MQ=255)
gCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttttt < 2:1358082/93‑1 (MQ=255)
gCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCtttttt < 2:175643/93‑1 (MQ=255)
|
AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT > NC_000913/1117517‑1117696
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT > NC_000913/1117514‑1117700
|
GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGG > SRR4302533.5365388/1‑94 (MQ=60)
GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGG > SRR4302533.197261/1‑94 (MQ=60)
AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCT < SRR4302533.2039590/94‑1 (MQ=60)
AAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCT > SRR4302533.5738130/1‑94 (MQ=60)
GGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCT > SRR4302533.4605812/1‑94 (MQ=60)
GTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTT < SRR4302533.5111074/94‑1 (MQ=60)
TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT > SRR4302533.3072458/1‑94 (MQ=60)
TAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTT > SRR4302533.1886341/1‑94 (MQ=60)
AAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTG < SRR4302533.4561078/94‑1 (MQ=60)
AAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTC > SRR4302533.5196784/1‑94 (MQ=60)
ACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATT < SRR4302533.269184/94‑1 (MQ=60)
ACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATT > SRR4302533.2120815/1‑94 (MQ=60)
ACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATT > SRR4302533.6322181/1‑94 (MQ=60)
CCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTT > SRR4302533.1961934/1‑94 (MQ=60)
CCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTT > SRR4302533.3607808/1‑94 (MQ=60)
CGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTT > SRR4302533.6012944/1‑94 (MQ=60)
CGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAGTTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTA < SRR4302533.5206684/94‑1 (MQ=60)
CGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTA > SRR4302533.5450202/1‑94 (MQ=60)
GAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAA < SRR4302533.5834682/94‑1 (MQ=60)
AAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAAT < SRR4302533.2276327/94‑1 (MQ=60)
AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC < SRR4302533.4988653/94‑1 (MQ=60)
AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC > SRR4302533.1681987/1‑94 (MQ=60)
AATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATC < SRR4302533.4026895/94‑1 (MQ=60)
ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG < SRR4302533.4691628/94‑1 (MQ=60)
ATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCG < SRR4302533.5242286/94‑1 (MQ=60)
CTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGC > SRR4302533.5342204/1‑94 (MQ=60)
TTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCG < SRR4302533.789437/94‑1 (MQ=60)
TTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCG < SRR4302533.193369/94‑1 (MQ=60)
TTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGG > SRR4302533.4191451/1‑94 (MQ=60)
TTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGG < SRR4302533.5725026/94‑1 (MQ=60)
TAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGC > SRR4302533.4135060/1‑94 (MQ=60)
TAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGC < SRR4302533.3861715/94‑1 (MQ=60)
AAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCA < SRR4302533.1676192/94‑1 (MQ=60)
AAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCA < SRR4302533.4882702/94‑1 (MQ=60)
AAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCA > SRR4302533.201324/1‑94 (MQ=60)
AAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCA < SRR4302533.776402/94‑1 (MQ=60)
AAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAA > SRR4302533.5342979/1‑94 (MQ=60)
AGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAAC > SRR4302533.2285395/1‑94 (MQ=60)
GGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACC > SRR4302533.972217/1‑94 (MQ=60)
GCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCT < SRR4302533.32776/94‑1 (MQ=60)
GCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCT < SRR4302533.4359284/94‑1 (MQ=60)
GTATAACCAGCTATGGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAA > SRR4302533.1494217/1‑94 (MQ=60)
GTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAA > SRR4302533.2901059/1‑94 (MQ=60)
TAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCG < SRR4302533.3913310/94‑1 (MQ=60)
AACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGG > SRR4302533.5086934/1‑94 (MQ=60)
ACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGC < SRR4302533.5001224/94‑1 (MQ=60)
CCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCA > SRR4302533.4444804/1‑94 (MQ=60)
CCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCA < SRR4302533.3252345/94‑1 (MQ=60)
AGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGA > SRR4302533.353329/1‑94 (MQ=60)
CTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGA > SRR4302533.5497253/1‑94 (MQ=60)
CTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGA > SRR4302533.914339/1‑94 (MQ=60)
CTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGA > SRR4302533.5748591/1‑94 (MQ=60)
TATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAA > SRR4302533.1624521/1‑94 (MQ=60)
ATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAAC < SRR4302533.3976601/94‑1 (MQ=60)
AGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACAT < SRR4302533.4317188/94‑1 (MQ=60)
CCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCA > SRR4302533.1379046/1‑94 (MQ=60)
CAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAG < SRR4302533.66220/94‑1 (MQ=60)
AAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGG < SRR4302533.4233247/94‑1 (MQ=60)
AAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACANCAGG > SRR4302533.946728/1‑94 (MQ=60)
AGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGG > SRR4302533.117821/1‑94 (MQ=60)
GTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAC < SRR4302533.1125614/94‑1 (MQ=60)
GTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAC > SRR4302533.3977555/1‑94 (MQ=60)
GTGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGAC < SRR4302533.3861964/94‑1 (MQ=60)
TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG < SRR4302533.4190675/94‑1 (MQ=60)
TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG < SRR4302533.5572527/94‑1 (MQ=60)
TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG > SRR4302533.1871093/1‑94 (MQ=60)
TGCTGGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACG < SRR4302533.4105299/94‑1 (MQ=60)
GGATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAA > SRR4302533.5530960/1‑94 (MQ=60)
ATGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGG < SRR4302533.4705805/94‑1 (MQ=60)
TGCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGT > SRR4302533.4160265/1‑94 (MQ=60)
GCGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTT < SRR4302533.787899/94‑1 (MQ=60)
CGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTA > SRR4302533.6215250/1‑94 (MQ=60)
CGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTA < SRR4302533.2148410/94‑1 (MQ=60)
CGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTA > SRR4302533.5260689/1‑94 (MQ=60)
CGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTA < SRR4302533.383083/94‑1 (MQ=60)
CGGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTA < SRR4302533.3568551/94‑1 (MQ=60)
GGAAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAA < SRR4302533.3890400/94‑1 (MQ=60)
AAATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAAC < SRR4302533.58148/94‑1 (MQ=60)
AATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACC < SRR4302533.3214275/94‑1 (MQ=60)
ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCA > SRR4302533.2327921/1‑94 (MQ=60)
ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCA < SRR4302533.2381885/94‑1 (MQ=60)
ATTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACAA > SRR4302533.2674016/1‑94 (MQ=60)
TTAACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAA > SRR4302533.1702617/1‑94 (MQ=60)
AACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGC > SRR4302533.6008365/1‑94 (MQ=60)
AACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGC < SRR4302533.5754174/94‑1 (MQ=60)
ACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCA > SRR4302533.3706534/1‑94 (MQ=60)
ACAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCA > SRR4302533.5811089/1‑94 (MQ=60)
CAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAG < SRR4302533.497846/94‑1 (MQ=60)
CAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAG < SRR4302533.2940449/94‑1 (MQ=60)
CAAAGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAG < SRR4302533.3552428/94‑1 (MQ=60)
CAAAGGCGTGCTGGCATTCTTTGTCAATTTTGTAATCGGCAGCAACCGCTGAACCGCCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAG < SRR4302533.3552427/94‑1 (MQ=60)
AAGGCGTCCTGCTCTTCTTTTTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGC < SRR4302533.1133168/94‑1 (MQ=60)
AGGCGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCT < SRR4302533.3580431/94‑1 (MQ=60)
CGTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTT > SRR4302533.2260504/1‑94 (MQ=60)
GTGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTT > SRR4302533.5070881/1‑94 (MQ=60)
TGCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTT > SRR4302533.6252205/1‑94 (MQ=60)
GCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT > SRR4302533.6114128/1‑94 (MQ=60)
GCTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTT > SRR4302533.2308590/1‑94 (MQ=60)
CTGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTC > SRR4302533.851280/1‑94 (MQ=60)
TGGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCA > SRR4302533.4996148/1‑94 (MQ=60)
GGCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAT > SRR4302533.4946410/1‑94 (MQ=60)
GCCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT < SRR4302533.3184368/94‑1 (MQ=60)
|
GTCAAAGGTAAAAGTACCGTCGAAATCTTTAAAGGTGCCGTATAACCAGCTATAGCCAAGGTGCTGGATGCGGAAATTAACAAAGGCGTGCTGACCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATT > NC_000913/1117514‑1117700
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
