Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,167,731 |
T→C |
T109A (ACC→GCC) |
ycfQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,167,731 | 0 | T | C | 100.0%
| 889.1
/ NA
| 270 | T109A (ACC→GCC) | ycfQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/145); total (125/145) |
Only 100 of 276 total aligned reads displayed.
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > NC_000913/1167641‑1167820
|
aTTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaa < 1:1323690/93‑1 (MQ=255)
tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa > 1:4311311/1‑93 (MQ=255)
tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa < 1:4721450/93‑1 (MQ=255)
tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc > 2:8301287/1‑93 (MQ=255)
taaCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCa < 1:1078595/92‑1 (MQ=255)
cAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCa < 1:1732646/93‑1 (MQ=255)
aaCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAg > 2:147894/1‑93 (MQ=255)
aaCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAg > 2:2948586/1‑93 (MQ=255)
aCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGt > 1:687155/1‑93 (MQ=255)
cGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGtt < 1:6722600/93‑1 (MQ=255)
cGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGtt < 1:4952341/93‑1 (MQ=255)
tATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTgg > 1:8485522/1‑93 (MQ=255)
tATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTgg < 1:5570300/93‑1 (MQ=255)
ttGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCg > 1:8699974/1‑93 (MQ=255)
tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa < 1:785787/93‑1 (MQ=255)
tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa < 1:5787966/93‑1 (MQ=255)
tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa < 1:4554777/93‑1 (MQ=255)
ggCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAt < 2:9916304/93‑1 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg < 1:6745026/93‑1 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg < 1:2548556/93‑1 (MQ=255)
cGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATgg > 2:7745716/1‑93 (MQ=255)
gATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgc < 1:7154581/93‑1 (MQ=255)
gATATCTCCTGAATCTGGGGAGAGGGCGGGGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTTGCGCTggt > 2:8465123/1‑92 (MQ=255)
atCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcagc < 1:5453885/93‑1 (MQ=255)
tcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaaa > 2:7046755/1‑93 (MQ=255)
cTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAAt < 2:1830996/93‑1 (MQ=255)
aaTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGt < 1:804045/93‑1 (MQ=255)
aTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTc > 1:2691064/1‑93 (MQ=255)
tCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTca < 2:2370085/93‑1 (MQ=255)
ggggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcc > 2:7032046/1‑93 (MQ=255)
gggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcca < 1:1207851/93‑1 (MQ=255)
ggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagccag > 1:9619781/1‑93 (MQ=255)
gagaGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGTGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagccagc < 1:6313692/93‑1 (MQ=255)
gagaGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagccagc < 1:2221696/93‑1 (MQ=255)
agagGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGACAGCCAgcg > 2:7636783/1‑93 (MQ=255)
ggtggtGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGa < 1:1360684/93‑1 (MQ=255)
gtggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAc < 1:9117624/93‑1 (MQ=255)
gtggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAc < 2:4860589/93‑1 (MQ=255)
ggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTc > 2:2861043/1‑93 (MQ=255)
ggggCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTc > 2:3576466/4‑93 (MQ=255)
gtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTcc < 2:3648369/93‑1 (MQ=255)
gtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTcc > 2:956878/1‑93 (MQ=255)
ngNAGTTNTTGATCATGAAGCNGNCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa < 1:7499779/92‑1 (MQ=255)
gCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAc < 2:4524748/93‑1 (MQ=255)
gCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAc < 1:3203793/93‑1 (MQ=255)
cAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACg < 2:44052/93‑1 (MQ=255)
cAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACg > 1:1026969/1‑93 (MQ=255)
gttgttGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCt > 1:1481742/1‑93 (MQ=255)
ttgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtt > 1:1603741/1‑93 (MQ=255)
ttgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtt < 2:2272910/93‑1 (MQ=255)
tgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCttt < 2:1116409/93‑1 (MQ=255)
tgttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCttt < 2:8867286/93‑1 (MQ=255)
gttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtttt > 2:978264/1‑93 (MQ=255)
ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc > 1:3363720/1‑93 (MQ=255)
tgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAAGCTTTtct > 2:541826/1‑93 (MQ=255)
gATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtctc < 2:4209026/93‑1 (MQ=255)
gATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtctc < 1:8305005/93‑1 (MQ=255)
tCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCtt > 2:8211926/1‑93 (MQ=255)
aTGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTca > 2:8597739/1‑93 (MQ=255)
gatgcagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTcaca < 2:745650/90‑1 (MQ=255)
gcagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACaaaa > 2:6675752/1‑93 (MQ=255)
cagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAAc < 2:4664464/93‑1 (MQ=255)
agcCTCGCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACa < 2:2769869/93‑1 (MQ=255)
ccTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGc < 1:4829478/93‑1 (MQ=255)
cTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCt < 2:5077898/93‑1 (MQ=255)
tGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtg < 2:9239162/93‑1 (MQ=255)
gCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtgt < 2:9709388/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc < 2:1243299/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc < 1:9915981/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc < 2:6414853/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc < 2:59718/93‑1 (MQ=255)
ggggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCt > 2:5976687/1‑93 (MQ=255)
ggggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCt > 1:3423456/1‑93 (MQ=255)
gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtt > 1:7385107/1‑93 (MQ=255)
gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtt > 2:525835/1‑93 (MQ=255)
gggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCtc > 1:7673499/1‑92 (MQ=255)
ggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTc > 1:4158422/1‑93 (MQ=255)
ggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTc < 1:300246/93‑1 (MQ=255)
ggTGGCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTc < 2:2548467/93‑1 (MQ=255)
gtgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCa > 1:2787349/1‑93 (MQ=255)
tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAACACAGCTGTGCTTCAt > 1:5668557/1‑93 (MQ=255)
tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt > 2:3221488/1‑93 (MQ=255)
tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt > 2:3508144/1‑93 (MQ=255)
tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt > 2:5836792/1‑93 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg > 2:4068247/1‑93 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg > 1:9665744/1‑93 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg > 1:6027899/1‑93 (MQ=255)
tCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGc > 1:9348487/1‑93 (MQ=255)
tCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGc < 2:9625294/93‑1 (MQ=255)
cTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt < 2:4372888/93‑1 (MQ=255)
cTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt > 2:1998234/1‑93 (MQ=255)
cTTTGCGGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt < 1:8013784/93‑1 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt < 1:4409562/93‑1 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt > 1:2074428/1‑93 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt < 1:3845484/93‑1 (MQ=255)
ttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTa < 1:425034/93‑1 (MQ=255)
ttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTa > 1:1967618/1‑93 (MQ=255)
ttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTa < 1:8795276/93‑1 (MQ=255)
tGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAg < 2:7236967/93‑1 (MQ=255)
gCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGc < 1:9457448/93‑1 (MQ=255)
|
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > NC_000913/1167641‑1167820
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > NC_000913/1167638‑1167824
|
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302540.9239871/1‑94 (MQ=60)
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302540.1216668/1‑94 (MQ=60)
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302540.5500053/1‑94 (MQ=60)
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302540.7345158/1‑94 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA > SRR4302540.4358245/1‑94 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA < SRR4302540.1337492/94‑1 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA < SRR4302540.1337494/94‑1 (MQ=60)
TTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAG < SRR4302540.4645532/94‑1 (MQ=60)
TTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAG < SRR4302540.4771883/94‑1 (MQ=60)
TTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGC > SRR4302540.288977/1‑94 (MQ=60)
TTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGC > SRR4302540.166158/1‑94 (MQ=60)
TTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGC > SRR4302540.1658700/1‑94 (MQ=60)
TAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAG < SRR4302540.1089620/94‑1 (MQ=60)
CAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAG < SRR4302540.9650941/94‑1 (MQ=60)
CAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAG > SRR4302540.3573025/1‑94 (MQ=60)
CAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAG < SRR4302540.1751346/94‑1 (MQ=60)
AACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGT > SRR4302540.694530/1‑94 (MQ=60)
ACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTT > SRR4302540.263667/1‑94 (MQ=60)
ACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTT < SRR4302540.3207836/94‑1 (MQ=60)
CGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTG < SRR4302540.5005846/94‑1 (MQ=60)
CGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTG < SRR4302540.7265578/94‑1 (MQ=60)
CGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTG < SRR4302540.6796797/94‑1 (MQ=60)
CGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTG < SRR4302540.9442394/94‑1 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGG > SRR4302540.2781239/1‑94 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGG > SRR4302540.6195081/1‑94 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGG > SRR4302540.8584101/1‑94 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGGGTCTTTGCTGGCAAAGCAGTTGG > SRR4302540.7558287/1‑94 (MQ=60)
TATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGC < SRR4302540.5631633/94‑1 (MQ=60)
ATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCG > SRR4302540.8800963/1‑94 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.2294120/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.9180580/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.794143/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.4604026/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.5851914/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302540.6923883/94‑1 (MQ=60)
GGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATG < SRR4302540.1923527/94‑1 (MQ=60)
GGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATG > SRR4302540.2504234/1‑94 (MQ=60)
GCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGG < SRR4302540.6819554/94‑1 (MQ=60)
GCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGG < SRR4302540.2576023/94‑1 (MQ=60)
GATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCA > SRR4302540.6898714/1‑94 (MQ=60)
GATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCA > SRR4302540.6748441/1‑94 (MQ=60)
GATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCA > SRR4302540.7183518/1‑94 (MQ=60)
GATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCA < SRR4302540.7234320/94‑1 (MQ=60)
ATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAG > SRR4302540.8525804/1‑94 (MQ=60)
ATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCA < SRR4302540.5513912/94‑1 (MQ=60)
CTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAA > SRR4302540.4396049/1‑94 (MQ=60)
CTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAA > SRR4302540.7291779/1‑94 (MQ=60)
TCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAA < SRR4302540.1544349/94‑1 (MQ=60)
CCTGAATCTGGGGAGATGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAAT > SRR4302540.2115001/1‑94 (MQ=60)
CTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATA > SRR4302540.8787138/1‑94 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC < SRR4302540.812586/94‑1 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC < SRR4302540.812585/94‑1 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC > SRR4302540.2720136/1‑94 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGCATTTGCTGGCAAAGCAGTTCGCGATGGCAGCAAAATAGca > SRR4302540.7628195/1‑92 (MQ=60)
TGGGGAGCGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTTCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCC < SRR4302540.4550910/94‑1 (MQ=60)
TGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCC < SRR4302540.1539709/94‑1 (MQ=60)
TGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCC < SRR4302540.4470496/94‑1 (MQ=60)
GGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAG < SRR4302540.1220246/94‑1 (MQ=60)
GGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAG > SRR4302540.9733175/1‑94 (MQ=60)
GAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGTGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCG < SRR4302540.6383998/94‑1 (MQ=60)
GAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCG < SRR4302540.1966462/94‑1 (MQ=60)
GAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCG < SRR4302540.2245647/94‑1 (MQ=60)
AGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGC < SRR4302540.5682683/94‑1 (MQ=60)
AGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAG < SRR4302540.9745981/94‑1 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC < SRR4302540.1375044/94‑1 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC < SRR4302540.4705817/94‑1 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC < SRR4302540.8148876/94‑1 (MQ=60)
GTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACT < SRR4302540.9227218/94‑1 (MQ=60)
TGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTC < SRR4302540.5399791/94‑1 (MQ=60)
TGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTC > SRR4302540.8598302/1‑94 (MQ=60)
TGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTC > SRR4302540.2208064/1‑94 (MQ=60)
GGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCCAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCC > SRR4302540.5560574/1‑94 (MQ=60)
TGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAC < SRR4302540.1089107/94‑1 (MQ=60)
NGNAGTTNTTGATCATGAAGCNGNCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAC < SRR4302540.7583580/94‑1 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG < SRR4302540.3238588/94‑1 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG > SRR4302540.9495514/1‑94 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG > SRR4302540.8530416/1‑94 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG > SRR4302540.1037385/1‑94 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACC > SRR4302540.3117582/1‑94 (MQ=60)
AGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCT > SRR4302540.9516834/1‑94 (MQ=60)
AGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCT > SRR4302540.1497993/1‑94 (MQ=60)
AGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGAAGACTCCACGCT > SRR4302540.1497992/1‑94 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTT > SRR4302540.1265575/1‑94 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTT > SRR4302540.1621285/1‑94 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTT > SRR4302540.5275694/1‑94 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCCGGAAAAGTAGTTGACGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGATT > SRR4302540.1843438/1‑94 (MQ=60)
TGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTT > SRR4302540.1358658/1‑94 (MQ=60)
GTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGCCTCCACGCTTTTC > SRR4302540.3413180/1‑94 (MQ=60)
GTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTC > SRR4302540.3400530/1‑94 (MQ=60)
TTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCT > SRR4302540.5815942/1‑94 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT > SRR4302540.4424548/1‑94 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT < SRR4302540.8401441/94‑1 (MQ=60)
ATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTT < SRR4302540.7093428/94‑1 (MQ=60)
TCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTC > SRR4302540.3333991/1‑94 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC > SRR4302540.1104175/1‑94 (MQ=60)
AAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAA < SRR4302540.10002529/94‑1 (MQ=60)
AGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACACAACAG > SRR4302540.7615951/1‑94 (MQ=60)
AGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAG < SRR4302540.290609/94‑1 (MQ=60)
AGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAG > SRR4302540.7915014/1‑94 (MQ=60)
AGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAG > SRR4302540.7915013/1‑94 (MQ=60)
CCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCT < SRR4302540.4881201/94‑1 (MQ=60)
CCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCT < SRR4302540.422584/94‑1 (MQ=60)
CCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCT < SRR4302540.4881199/94‑1 (MQ=60)
TGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGT < SRR4302540.1123513/94‑1 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT > SRR4302540.6816131/1‑94 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT > SRR4302540.3599721/1‑94 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT > SRR4302540.3460677/1‑94 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT < SRR4302540.9306662/94‑1 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT < SRR4302540.10031789/94‑1 (MQ=60)
GGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTT > SRR4302540.7467389/1‑94 (MQ=60)
GGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTT > SRR4302540.4964631/1‑94 (MQ=60)
GGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTT > SRR4302540.6329602/1‑94 (MQ=60)
GGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTC > SRR4302540.7760135/1‑94 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC > SRR4302540.5607229/1‑94 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC < SRR4302540.5708552/94‑1 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC < SRR4302540.9707977/94‑1 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC > SRR4302540.4203481/1‑94 (MQ=60)
GGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCA > SRR4302540.2817452/1‑94 (MQ=60)
GGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCA < SRR4302540.303213/94‑1 (MQ=60)
GGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCA < SRR4302540.6737648/94‑1 (MQ=60)
GGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTATGCTTCA < SRR4302540.1005299/94‑1 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAACACAGCTGTGCTTCAT > SRR4302540.5730980/1‑94 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAT > SRR4302540.820531/1‑94 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAT < SRR4302540.4138042/94‑1 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAT < SRR4302540.8917787/94‑1 (MQ=60)
TGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATG > SRR4302540.6094786/1‑94 (MQ=60)
TGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATG > SRR4302540.9779502/1‑94 (MQ=60)
TGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATG < SRR4302540.1999090/94‑1 (MQ=60)
GTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC > SRR4302540.4325153/1‑94 (MQ=60)
GTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC > SRR4302540.9459842/1‑94 (MQ=60)
GTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC < SRR4302540.4774675/94‑1 (MQ=60)
GTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC < SRR4302540.2657498/94‑1 (MQ=60)
TCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCT < SRR4302540.8058730/94‑1 (MQ=60)
CTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTT < SRR4302540.803629/94‑1 (MQ=60)
CTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTT > SRR4302540.2096732/1‑94 (MQ=60)
CTTTGCGGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTT < SRR4302540.8106998/94‑1 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA > SRR4302540.1988988/1‑94 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA < SRR4302540.4457360/94‑1 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA < SRR4302540.3887302/94‑1 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA < SRR4302540.5874921/94‑1 (MQ=60)
TTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAG < SRR4302540.8896990/94‑1 (MQ=60)
TTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAG < SRR4302540.429505/94‑1 (MQ=60)
TTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAG < SRR4302540.4207537/94‑1 (MQ=60)
TGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGC < SRR4302540.8871875/94‑1 (MQ=60)
TCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCG < SRR4302540.3269468/94‑1 (MQ=60)
GCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCG > SRR4302540.9813377/1‑94 (MQ=60)
GCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCG < SRR4302540.9569677/94‑1 (MQ=60)
GCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCG < SRR4302540.1282555/94‑1 (MQ=60)
CTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > SRR4302540.6041757/1‑94 (MQ=60)
CAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > SRR4302540.61823/1‑94 (MQ=60)
CAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA < SRR4302540.5003779/94‑1 (MQ=60)
|
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > NC_000913/1167638‑1167824
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
