Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,167,731 |
T→C |
T109A (ACC→GCC) |
ycfQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,167,731 | 0 | T | C | 100.0%
| 641.3
/ NA
| 196 | T109A (ACC→GCC) | ycfQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/110); total (86/110) |
Only 100 of 199 total aligned reads displayed.
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > NC_000913/1167641‑1167820
|
aTTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaa > 1:850306/1‑93 (MQ=255)
tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa > 1:1073162/1‑93 (MQ=255)
tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa > 1:517265/1‑93 (MQ=255)
tttCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCaaa < 2:4501954/93‑1 (MQ=255)
tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc < 1:458245/93‑1 (MQ=255)
tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc < 2:4259107/93‑1 (MQ=255)
tCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGc < 1:3036270/93‑1 (MQ=255)
cAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCa > 2:3394613/1‑93 (MQ=255)
aaCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAg < 1:5980105/93‑1 (MQ=255)
aaCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAg < 2:3128368/93‑1 (MQ=255)
aCGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGt < 2:4139745/93‑1 (MQ=255)
cGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGtt < 2:5066805/93‑1 (MQ=255)
tATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTgg > 1:3013258/1‑93 (MQ=255)
ttGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCg < 2:5526167/93‑1 (MQ=255)
ttGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCg < 1:1440913/93‑1 (MQ=255)
ttGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCg > 2:5326092/1‑93 (MQ=255)
tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa < 2:5867784/93‑1 (MQ=255)
tGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGa < 1:908020/93‑1 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg < 1:5297758/93‑1 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg > 1:4054884/1‑93 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg > 2:2928491/1‑93 (MQ=255)
gCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATg > 2:1195781/1‑93 (MQ=255)
cGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATgg < 1:4408788/93‑1 (MQ=255)
atCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcaga > 1:1855720/1‑92 (MQ=255)
atCTCCTGAATCTGGGGAGAGGGGGGTGCAGTTGTTGATCATGAAACAGCCTGCCGGGGCGTCTTTGCTGGCAAAGCAGGTGGCGATGgcagc > 2:6045343/1‑93 (MQ=255)
tctcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGgcagca > 2:4764709/1‑93 (MQ=255)
ctcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaa > 2:5250221/1‑93 (MQ=255)
tcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaaa > 2:1250603/1‑93 (MQ=255)
tcCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCaaa < 1:4446232/93‑1 (MQ=255)
ccTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGAGCGTCTTTGCTGGCAAAGCAGGTGGCGATGGCAGCcaaa > 1:3780470/1‑93 (MQ=255)
gAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAg < 2:1598978/93‑1 (MQ=255)
aaTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGt < 1:368897/93‑1 (MQ=255)
aaTCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGt < 2:3429904/93‑1 (MQ=255)
aTCTGGGGAGAGGGAGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTc > 2:84164/1‑93 (MQ=255)
tCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTca < 2:2447058/93‑1 (MQ=255)
cTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcag < 1:977404/93‑1 (MQ=255)
tGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagc < 2:4720861/93‑1 (MQ=255)
gggAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTcagcca > 1:1386692/1‑93 (MQ=255)
agGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCa > 2:1797820/1‑93 (MQ=255)
agGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCa > 1:4798021/1‑93 (MQ=255)
agGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCa < 1:4236987/93‑1 (MQ=255)
gggTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAg > 2:2258517/1‑93 (MQ=255)
ggtggtGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGa < 1:3360623/93‑1 (MQ=255)
gtggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAc > 1:5240661/1‑93 (MQ=255)
tggtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACt > 1:473080/1‑93 (MQ=255)
gtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTcc > 1:1250031/1‑93 (MQ=255)
gtgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTcc > 1:4490255/1‑93 (MQ=255)
atgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGACTTAGATGGCAAAAAAGTTGGCGATGGCAGCAGAATAGTCAGCCAGCGCCGACTcc < 1:6309236/92‑1 (MQ=255)
tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa < 2:2898753/93‑1 (MQ=255)
tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa < 2:1621521/93‑1 (MQ=255)
tgCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCa < 1:3450485/93‑1 (MQ=255)
gCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAc < 1:3520163/93‑1 (MQ=255)
aGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGc > 1:4313167/1‑93 (MQ=255)
gttgttGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCt < 2:2105983/93‑1 (MQ=255)
gttgttGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCt < 1:4952615/93‑1 (MQ=255)
gttgttGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCt < 2:4606973/93‑1 (MQ=255)
gttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCtttt > 2:555853/1‑93 (MQ=255)
ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc > 2:191977/1‑93 (MQ=255)
ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc < 2:4987807/93‑1 (MQ=255)
ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc < 1:1647524/93‑1 (MQ=255)
ttgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtc < 1:1550373/93‑1 (MQ=255)
tgATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTtct < 1:5605930/93‑1 (MQ=255)
aTCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTctct < 2:4210217/93‑1 (MQ=255)
aTCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTctct > 1:1036104/1‑93 (MQ=255)
aTCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTctct > 1:4252978/1‑93 (MQ=255)
cATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTc < 2:2517874/93‑1 (MQ=255)
cATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTc > 1:2307637/1‑93 (MQ=255)
aTGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTca < 1:4378422/93‑1 (MQ=255)
tGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTcac > 2:2041981/1‑93 (MQ=255)
cagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAAc < 2:2241488/93‑1 (MQ=255)
cagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAAc < 2:3588910/93‑1 (MQ=255)
cagcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAAc < 2:1410741/93‑1 (MQ=255)
gcCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAg > 2:3072530/1‑93 (MQ=255)
ccTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGc > 1:542864/1‑93 (MQ=255)
tGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtg < 1:563897/93‑1 (MQ=255)
gCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCGGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCtgt < 1:3818611/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc < 2:635442/93‑1 (MQ=255)
cGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGc > 2:3750005/1‑93 (MQ=255)
ggTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTc > 1:2637323/1‑93 (MQ=255)
gtgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCa < 1:483144/93‑1 (MQ=255)
tgtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAt < 1:3999945/93‑1 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg < 2:1956474/93‑1 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg < 1:4565849/93‑1 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATg > 1:2249546/1‑93 (MQ=255)
gtCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAACCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGCGCTTCATg > 2:1133132/1‑93 (MQ=255)
tCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGc < 2:3349372/93‑1 (MQ=255)
tCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGc > 2:5496084/1‑93 (MQ=255)
cTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt < 2:3648920/93‑1 (MQ=255)
cTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCt < 2:2427902/93‑1 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt > 1:216190/1‑93 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt < 1:5870939/93‑1 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt < 1:5534352/93‑1 (MQ=255)
tttGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCtt > 2:3876640/1‑93 (MQ=255)
tGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACACAACAGCTGTGCTTCATGCTTAg > 2:2739020/1‑93 (MQ=255)
gCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGc < 2:4353819/93‑1 (MQ=255)
cTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCg < 1:4699966/93‑1 (MQ=255)
cTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCg < 2:2862169/93‑1 (MQ=255)
cTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCg < 2:6197494/93‑1 (MQ=255)
tGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCgg > 1:6188413/1‑93 (MQ=255)
tGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCgg < 2:6226456/93‑1 (MQ=255)
|
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > NC_000913/1167641‑1167820
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > NC_000913/1167638‑1167824
|
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC < SRR4302533.6265400/94‑1 (MQ=60)
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302533.5331222/1‑94 (MQ=60)
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGC > SRR4302533.3699516/1‑94 (MQ=60)
TGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCA < SRR4302533.1544775/94‑1 (MQ=60)
GATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAA > SRR4302533.855283/1‑94 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA > SRR4302533.1079489/1‑94 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA > SRR4302533.520338/1‑94 (MQ=60)
ATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAA > SRR4302533.520337/1‑94 (MQ=60)
TTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAG > SRR4302533.2321748/1‑94 (MQ=60)
TCACCGTATTGGCGATATCTCGTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAACCAGCCTGCCGGTGTGTCTTTGCTGGCAAAGCA < SRR4302533.1786300/94‑1 (MQ=60)
TCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCA < SRR4302533.4396358/94‑1 (MQ=60)
TCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCA < SRR4302533.460986/94‑1 (MQ=60)
TCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCA < SRR4302533.3054849/94‑1 (MQ=60)
CAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAG > SRR4302533.4046978/1‑94 (MQ=60)
AACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGT < SRR4302533.6016327/94‑1 (MQ=60)
ACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTT < SRR4302533.3036122/94‑1 (MQ=60)
CGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTG > SRR4302533.3179953/1‑94 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGG > SRR4302533.3031692/1‑94 (MQ=60)
GTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGG < SRR4302533.5399210/94‑1 (MQ=60)
TTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGA < SRR4302533.1449607/94‑1 (MQ=60)
TGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGAT < SRR4302533.913345/94‑1 (MQ=60)
GGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATG > SRR4302533.4079572/1‑94 (MQ=60)
GCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGG < SRR4302533.5329492/94‑1 (MQ=60)
CGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGC < SRR4302533.4435413/94‑1 (MQ=60)
ATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAG > SRR4302533.1444456/1‑94 (MQ=60)
ATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAG > SRR4302533.5909856/1‑94 (MQ=60)
TATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGA > SRR4302533.1867037/1‑94 (MQ=60)
ATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCA > SRR4302533.3806013/1‑94 (MQ=60)
TCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAA > SRR4302533.4324489/1‑94 (MQ=60)
TCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAA < SRR4302533.4473124/94‑1 (MQ=60)
TCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGAGCGTCTTTGCTGGCAAAGCAGGTGGCGATGGCAGCCAAA > SRR4302533.3803630/1‑94 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC < SRR4302533.5310105/94‑1 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC < SRR4302533.371125/94‑1 (MQ=60)
AATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTC < SRR4302533.3673432/94‑1 (MQ=60)
CTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGC < SRR4302533.983137/94‑1 (MQ=60)
TGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCC > SRR4302533.3467362/1‑94 (MQ=60)
GGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCA > SRR4302533.1395038/1‑94 (MQ=60)
GGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCA < SRR4302533.1616620/94‑1 (MQ=60)
GGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCA < SRR4302533.473100/94‑1 (MQ=60)
GGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAG > SRR4302533.1288563/1‑94 (MQ=60)
GGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGC > SRR4302533.96163/1‑94 (MQ=60)
GAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCG < SRR4302533.788538/94‑1 (MQ=60)
GAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCA > SRR4302533.4827084/1‑94 (MQ=60)
AGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAG < SRR4302533.4262581/94‑1 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC > SRR4302533.5272165/1‑94 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC > SRR4302533.458828/1‑94 (MQ=60)
GGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGAC < SRR4302533.3381385/94‑1 (MQ=60)
GTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACT > SRR4302533.475908/1‑94 (MQ=60)
GTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACT > SRR4302533.4446069/1‑94 (MQ=60)
TGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTC < SRR4302533.891644/94‑1 (MQ=60)
GGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCC > SRR4302533.4517448/1‑94 (MQ=60)
GGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCC > SRR4302533.1257497/1‑94 (MQ=60)
ATGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGACTTAGATGGCAAAAAAGTTGGCGATGGCAGCAGAATAGTCAGCCAGCGCCGACTCCA < SRR4302533.6347164/94‑1 (MQ=60)
TGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAC < SRR4302533.3471790/94‑1 (MQ=60)
TGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCAC < SRR4302533.4806222/94‑1 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG < SRR4302533.14658/94‑1 (MQ=60)
GCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACG < SRR4302533.3541864/94‑1 (MQ=60)
CAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGC > SRR4302533.4339133/1‑94 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTT < SRR4302533.4982611/94‑1 (MQ=60)
GTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTT < SRR4302533.1141526/94‑1 (MQ=60)
TTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCT < SRR4302533.1657503/94‑1 (MQ=60)
TTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCT < SRR4302533.1559715/94‑1 (MQ=60)
TGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTC < SRR4302533.5639805/94‑1 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT > SRR4302533.1042195/1‑94 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT > SRR4302533.4278630/1‑94 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT > SRR4302533.5853373/1‑94 (MQ=60)
GATCATGAAGCAGCCTGCCGGGGGGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCT > SRR4302533.4841355/1‑94 (MQ=60)
TCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTC > SRR4302533.3479349/1‑94 (MQ=60)
TCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTC > SRR4302533.2321931/1‑94 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC > SRR4302533.5042380/1‑94 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC < SRR4302533.1861832/94‑1 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC < SRR4302533.4017835/94‑1 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC < SRR4302533.4404857/94‑1 (MQ=60)
ATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCAC > SRR4302533.4272539/1‑94 (MQ=60)
GAAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAA > SRR4302533.4409574/1‑94 (MQ=60)
AAGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAA < SRR4302533.4602314/94‑1 (MQ=60)
AGCAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAA < SRR4302533.6296168/94‑1 (MQ=60)
CAGCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACA < SRR4302533.3711968/94‑1 (MQ=60)
GCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGC < SRR4302533.4686367/94‑1 (MQ=60)
GCCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGC > SRR4302533.546087/1‑94 (MQ=60)
CCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCT < SRR4302533.2114011/94‑1 (MQ=60)
CCTGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCT < SRR4302533.2356029/94‑1 (MQ=60)
TGCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGT < SRR4302533.567238/94‑1 (MQ=60)
GCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCGGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTG < SRR4302533.3841963/94‑1 (MQ=60)
GCCGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTG < SRR4302533.2997972/94‑1 (MQ=60)
CGGGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCT < SRR4302533.4148909/94‑1 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC > SRR4302533.2653533/1‑94 (MQ=60)
GGGTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTC > SRR4302533.4495040/1‑94 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAT < SRR4302533.486027/94‑1 (MQ=60)
GTGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCAT < SRR4302533.6068668/94‑1 (MQ=60)
TGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATG < SRR4302533.4024299/94‑1 (MQ=60)
TGTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATG > SRR4302533.2263450/1‑94 (MQ=60)
GTCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC < SRR4302533.4593532/94‑1 (MQ=60)
GTCTGTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGC < SRR4302533.4967441/94‑1 (MQ=60)
TCTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCT > SRR4302533.2179430/1‑94 (MQ=60)
CTTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTT > SRR4302533.217548/1‑94 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA < SRR4302533.5906424/94‑1 (MQ=60)
TTTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTA < SRR4302533.5567764/94‑1 (MQ=60)
TTGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAG < SRR4302533.5627067/94‑1 (MQ=60)
TGCTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGC < SRR4302533.5504269/94‑1 (MQ=60)
CTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > SRR4302533.6225553/1‑94 (MQ=60)
CTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG > SRR4302533.5670927/1‑94 (MQ=60)
CTGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGG < SRR4302533.4728463/94‑1 (MQ=60)
TGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGC > SRR4302533.2552366/1‑94 (MQ=60)
TGGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGC > SRR4302533.4490097/1‑94 (MQ=60)
GGCAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCA > SRR4302533.3829355/1‑94 (MQ=60)
CAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > SRR4302533.5482535/1‑94 (MQ=60)
CAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA < SRR4302533.4081484/94‑1 (MQ=60)
|
GTGATTTCAACGTATTGGCGATATCTCCTGAATCTGGGGAGAGGGTGGTGCAGTTGTTGATCATGAAGCAGCCTGCCGGGGTGTCTTTGCTGGTAAAGCAGTTGGCGATGGCAGCAAAATAGTCAGCCAGCGCAGACTCCACGCTTTTCTCTTCACAAAACAGCTGTGCTTCATGCTTAGCGGCAAA > NC_000913/1167638‑1167824
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
