Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,185,646	A→G	T194A (ACT→GCT)	pepT →	putative peptidase T

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,185,646	0	A	G	100.0%	840.1 / NA	259	T194A (ACT→GCT)	pepT	putative peptidase T
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/142); total (117/142)

Only 100 of 265 total aligned reads displayed.

GATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT  >  NC_000913/1185556‑1185735

 atatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTg                                                                                        <  1:6835753/93‑1 (MQ=255)

  tatTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGt                                                                                       >  2:8438030/1‑93 (MQ=255)

   atTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGtt                                                                                      >  2:8795940/1‑93 (MQ=255)

   atTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGtt                                                                                      <  2:1346442/93‑1 (MQ=255)

    ttCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTg                                                                                     >  2:6687858/1‑93 (MQ=255)

    ttCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTg                                                                                     >  2:579656/1‑93 (MQ=255)

    ttCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTg                                                                                     >  2:2584806/1‑93 (MQ=255)

     tCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGa                                                                                    >  1:8684425/1‑93 (MQ=255)

     tCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGa                                                                                    <  2:3884357/93‑1 (MQ=255)

      cgcgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAt                                                                                   <  1:9701499/93‑1 (MQ=255)

       gcgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtg                                                                                  <  2:4852026/93‑1 (MQ=255)

       gcgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtg                                                                                  <  1:8938264/93‑1 (MQ=255)

       gcgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtg                                                                                  <  2:1872242/93‑1 (MQ=255)

       ccgTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtg                                                                                  <  1:403281/92‑1 (MQ=255)

          tCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtg                                                                               >  1:3188518/1‑93 (MQ=255)

          tCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtg                                                                               <  2:280102/93‑1 (MQ=255)

          tCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtg                                                                               >  2:6047176/1‑93 (MQ=255)

            gCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtggt                                                                             <  2:6600610/93‑1 (MQ=255)

            gCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtggt                                                                             <  1:1107906/93‑1 (MQ=255)

              cTTTCCTCCGGGTGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATTCTCGCTGGGCTTACGCGGGTGAtggtggtgg                                                                           >  2:9599112/1‑93 (MQ=255)

              cTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAtggtggtgg                                                                           >  1:2332938/1‑93 (MQ=255)

               tttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGc                                                                          <  1:7813101/93‑1 (MQ=255)

                ttACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCg                                                                         >  1:5944014/1‑93 (MQ=255)

                  aCCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTa                                                                       <  2:1790854/93‑1 (MQ=255)

                   ccccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAg                                                                      <  1:6280666/93‑1 (MQ=255)

                    cccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAgg                                                                     >  1:4211112/1‑93 (MQ=255)

                     ccGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGc                                                                    <  1:3726202/93‑1 (MQ=255)

                       ggATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGa                                                                  >  2:1401966/1‑93 (MQ=255)

                        gATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGaa                                                                 <  1:812266/93‑1 (MQ=255)

                        gATGAAGAAGNNGGNAAAGGGGCGAAACATTTNGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCNaa                                                                 <  2:4824389/93‑1 (MQ=255)

                         aTGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAAc                                                                <  2:9753432/93‑1 (MQ=255)

                           gaagaaGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTg                                                              >  2:4310128/1‑93 (MQ=255)

                           gaagaaGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTg                                                              >  2:8237005/1‑93 (MQ=255)

                              gaagTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAg                                                           <  2:6996824/93‑1 (MQ=255)

                                agTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGtt                                                         <  1:3441140/93‑1 (MQ=255)

                                agTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGtt                                                         <  1:1779076/93‑1 (MQ=255)

                                 gtgtGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGttt                                                        <  2:2291713/93‑1 (MQ=255)

                                 gTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGttt                                                        >  1:8456875/1‑93 (MQ=255)

                                   gggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTCCGCTGTTGATGGTGGTGGGGTAGGCGAACTGGGGTTTGa                                                      >  1:3266947/1‑93 (MQ=255)

                                   gggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGa                                                      >  1:2888008/1‑93 (MQ=255)

                                   gggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGa                                                      >  2:6709929/1‑93 (MQ=255)

                                   gggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGa                                                      >  2:9509311/1‑93 (MQ=255)

                                    ggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGaa                                                     <  1:1258591/93‑1 (MQ=255)

                                    ggCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGaa                                                     >  2:4701412/1‑93 (MQ=255)

                                         aGGGACAAAACATTTAGGTGTTGACGCATGCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGCAGGCGAACTGGAGTTTGAAAACtt                                                <  2:8983055/93‑1 (MQ=255)

                                           gggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCa                                              <  1:7416193/93‑1 (MQ=255)

                                           gggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCa                                              <  1:7344233/93‑1 (MQ=255)

                                            ggggAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCaa                                             <  2:8497291/90‑1 (MQ=255)

                                            ggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCaa                                             <  2:39847/93‑1 (MQ=255)

                                            ggCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCaa                                             <  1:1836158/93‑1 (MQ=255)

                                             gCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAc                                            >  1:5505516/1‑93 (MQ=255)

                                             gCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAc                                            <  2:3686583/93‑1 (MQ=255)

                                               gAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgc                                          <  2:19759/93‑1 (MQ=255)

                                                gaaCATTTTGATGTTGACGCCTTCGATGCCCCCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGACCTGGAGTTTGAAAACTTCAAcgcc                                         <  1:311115/92‑1 (MQ=255)

                                                aaaCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgcc                                         >  2:439578/1‑93 (MQ=255)

                                                aaaCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgcc                                         >  1:7885666/1‑93 (MQ=255)

                                                  aCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgccgc                                       <  1:5114458/93‑1 (MQ=255)

                                                  aCATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAcgccgc                                       >  1:6382855/1‑93 (MQ=255)

                                                    aTTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGt                                     >  1:1211134/1‑93 (MQ=255)

                                                     ttttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTc                                    <  2:7673927/93‑1 (MQ=255)

                                                     ttttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTc                                    <  2:7313269/93‑1 (MQ=255)

                                                      tttGATGTGGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCg                                   <  1:3893464/93‑1 (MQ=255)

                                                       ttGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCgg                                  <  2:3387009/93‑1 (MQ=255)

                                                         gATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTc                                >  1:10034630/1‑93 (MQ=255)

                                                         gATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTc                                <  2:5065059/93‑1 (MQ=255)

                                                          aTGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCa                               <  2:8119941/93‑1 (MQ=255)

                                                           tGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCaa                              >  1:8806904/1‑93 (MQ=255)

                                                           tGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCaa                              <  2:2535539/93‑1 (MQ=255)

                                                            gTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAat                             <  1:930595/93‑1 (MQ=255)

                                                              tGACGCCTTCGATGCCCCCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAatat                           <  1:7530399/93‑1 (MQ=255)

                                                               gACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATc                          <  2:7542183/93‑1 (MQ=255)

                                                               gACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATc                          <  2:7910317/93‑1 (MQ=255)

                                                               gACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATc                          >  2:5740634/1‑93 (MQ=255)

                                                                gcGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCa                         <  2:3423816/92‑1 (MQ=255)

                                                                aCGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCa                         <  1:459094/93‑1 (MQ=255)

                                                                 cGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaa                        <  2:5375845/93‑1 (MQ=255)

                                                                 cGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCaa                        >  1:3695033/1‑93 (MQ=255)

                                                                    cTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAt                     >  1:7126192/1‑93 (MQ=255)

                                                                    cTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAt                     >  1:6891977/1‑93 (MQ=255)

                                                                    cTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAt                     <  1:4916105/93‑1 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    <  1:8793427/93‑1 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    <  1:4441710/93‑1 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAtt                    >  1:5201672/1‑93 (MQ=255)

                                                                     ttCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTCGAGCTTGAAAAATTCAACGCAGCGTCGGTCAATCTCAAAAtt                    >  2:173309/1‑93 (MQ=255)

                                                                         aTGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCg                >  1:2301815/1‑93 (MQ=255)

                                                                         aTGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCg                <  1:8444978/93‑1 (MQ=255)

                                                                          tGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCgg               <  1:6009413/93‑1 (MQ=255)

                                                                           gCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGt              <  2:8573198/93‑1 (MQ=255)

                                                                            cccGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTa             >  1:8315123/1‑93 (MQ=255)

                                                                            cccGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTa             >  2:5913228/1‑93 (MQ=255)

                                                                            cccGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTa             <  1:2094554/93‑1 (MQ=255)

                                                                             ccGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTaa            <  2:9343595/93‑1 (MQ=255)

                                                                               gCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACa          <  1:8228281/93‑1 (MQ=255)

                                                                                cTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACaa         <  1:6672858/93‑1 (MQ=255)

                                                                                  gggCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATg       <  2:2512331/93‑1 (MQ=255)

                                                                                   ggCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGt      >  1:3131176/1‑93 (MQ=255)

                                                                                    gCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGtt     <  1:5865977/93‑1 (MQ=255)

                                                                                      ttACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCa   >  1:3585319/1‑93 (MQ=255)

                                                                                      ttACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCa   <  1:1486396/93‑1 (MQ=255)

                                                                                       tACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAt  >  1:9878371/1‑93 (MQ=255)

GATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT  >  NC_000913/1185556‑1185735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGG  >  NC_000913/1185553‑1185739

GGTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACG                                                                                               >  SRR4302540.2301244/1‑94 (MQ=60)

 GTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGC                                                                                              <  SRR4302540.4935541/94‑1 (MQ=60)

  TGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCT                                                                                             <  SRR4302540.8165931/94‑1 (MQ=60)

  TGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCT                                                                                             >  SRR4302540.8970712/1‑94 (MQ=60)

   GATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTG                                                                                            <  SRR4302540.3536516/94‑1 (MQ=60)

    ATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGT                                                                                           <  SRR4302540.6911463/94‑1 (MQ=60)

     TATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTT                                                                                          <  SRR4302540.192284/94‑1 (MQ=60)

      ATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTG                                                                                         >  SRR4302540.6800337/1‑94 (MQ=60)

      ATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTG                                                                                         >  SRR4302540.8841780/1‑94 (MQ=60)

      ATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTG                                                                                         >  SRR4302540.8510579/1‑94 (MQ=60)

      ATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTG                                                                                         <  SRR4302540.6531442/94‑1 (MQ=60)

      ATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTG                                                                                         <  SRR4302540.1948087/94‑1 (MQ=60)

       TTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGA                                                                                        >  SRR4302540.8785271/1‑94 (MQ=60)

       TTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGA                                                                                        >  SRR4302540.8785272/1‑94 (MQ=60)

        TCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGAT                                                                                       <  SRR4302540.1101492/94‑1 (MQ=60)

         CGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATG                                                                                      <  SRR4302540.9815554/94‑1 (MQ=60)

          GCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGG                                                                                     <  SRR4302540.9043026/94‑1 (MQ=60)

          CCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGG                                                                                     <  SRR4302540.407492/94‑1 (MQ=60)

           CGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGT                                                                                    >  SRR4302540.7297378/1‑94 (MQ=60)

            GTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTG                                                                                   <  SRR4302540.9179762/94‑1 (MQ=60)

            GTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTG                                                                                   >  SRR4302540.3468025/1‑94 (MQ=60)

            GTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTG                                                                                   >  SRR4302540.3223154/1‑94 (MQ=60)

             TCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGG                                                                                  <  SRR4302540.3695671/94‑1 (MQ=60)

              CGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGT                                                                                 >  SRR4302540.3239810/1‑94 (MQ=60)

               GCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTG                                                                                <  SRR4302540.1119351/94‑1 (MQ=60)

                CCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGG                                                                               >  SRR4302540.2358075/1‑94 (MQ=60)

                 CTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGC                                                                              >  SRR4302540.6333138/1‑94 (MQ=60)

                 CTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGC                                                                              >  SRR4302540.3220468/1‑94 (MQ=60)

                  TTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCG                                                                             >  SRR4302540.6068093/1‑94 (MQ=60)

                  TTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCG                                                                             >  SRR4302540.6009722/1‑94 (MQ=60)

                  TTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCG                                                                             <  SRR4302540.7904402/94‑1 (MQ=60)

                  TTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCG                                                                             <  SRR4302540.2818298/94‑1 (MQ=60)

                   TTACCCCGGATGAAGAAGTGGGCAAAGGGGCGATACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGT                                                                            <  SRR4302540.9798191/94‑1 (MQ=60)

                   TTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATTGTGGTGGCGT                                                                            <  SRR4302540.9266853/94‑1 (MQ=60)

                      CCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGG                                                                         <  SRR4302540.6350557/94‑1 (MQ=60)

                      CCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGG                                                                         >  SRR4302540.4256966/1‑94 (MQ=60)

                       CCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGC                                                                        >  SRR4302540.7977570/1‑94 (MQ=60)

                       CCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGC                                                                        >  SRR4302540.4401519/1‑94 (MQ=60)

                       CCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGATGTTGATGGTGGTGGCGTAGGC                                                                        <  SRR4302540.1834947/94‑1 (MQ=60)

                        CCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCG                                                                       <  SRR4302540.3766861/94‑1 (MQ=60)

                        CCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGACCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCG                                                                       >  SRR4302540.3065628/1‑94 (MQ=60)

                        CCGGATGAAGAAGTGGCCAAAGGGGCGAAACATTTTGATGTTGACGCCTGCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCG                                                                       <  SRR4302540.3766860/94‑1 (MQ=60)

                         CGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGA                                                                      >  SRR4302540.3154385/1‑94 (MQ=60)

                           GATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAAC                                                                    <  SRR4302540.820891/94‑1 (MQ=60)

                           GATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAAC                                                                    <  SRR4302540.820892/94‑1 (MQ=60)

                               AAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGA                                                                <  SRR4302540.8246905/94‑1 (MQ=60)

                                AGAAGTGGTCAAAGGGTCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTTTTGATGGTGGTGGCGTAGGCGAACTGGAG                                                               <  SRR4302540.6910518/94‑1 (MQ=60)

                                 GAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGT                                                              <  SRR4302540.5122550/94‑1 (MQ=60)

                                   AGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTT                                                            >  SRR4302540.8555071/1‑94 (MQ=60)

                                   AGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTT                                                            <  SRR4302540.1798392/94‑1 (MQ=60)

                                   AGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTT                                                            <  SRR4302540.7327986/94‑1 (MQ=60)

                                   AGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTT                                                            <  SRR4302540.3478551/94‑1 (MQ=60)

                                    GTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTG                                                           >  SRR4302540.4878088/1‑94 (MQ=60)

                                     TGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTCCGCTGTTGATGGTGGTGGGGTAGGCGAACTGGGGTTTGA                                                          >  SRR4302540.3302597/1‑94 (MQ=60)

                                     TGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGA                                                          >  SRR4302540.3302596/1‑94 (MQ=60)

                                     TGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGA                                                          <  SRR4302540.10115881/94‑1 (MQ=60)

                                     TGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGA                                                          >  SRR4302540.2919462/1‑94 (MQ=60)

                                      GGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAA                                                         >  SRR4302540.6427407/1‑94 (MQ=60)

                                       gccaaaggcgcagAACATTTTGATGTCGACGCCTGCGATGCCCGCTGGGCTTACGCTGTTGAGGGTGGTGGCGTAGGCGACCTGGATTTTGAAA                                                        <  SRR4302540.1271816/81‑1 (MQ=60)

                                       GGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAA                                                        <  SRR4302540.1271494/94‑1 (MQ=60)

                                        GCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAA                                                       <  SRR4302540.7466540/94‑1 (MQ=60)

                                        GCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAA                                                       >  SRR4302540.1483217/1‑94 (MQ=60)

                                         gcAAGGGTCGAAACATTTTGATGTTGACGCCTTCTATGCCCGCTGGGCTTACGCTTTTGATGGTGGTGGCGTAGCCGAAATGGAGTTTGAAAAC                                                      <  SRR4302540.4042393/92‑1 (MQ=60)

                                         CAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAAC                                                      <  SRR4302540.4042395/94‑1 (MQ=60)

                                              GGGGGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAA                                                 <  SRR4302540.1121640/94‑1 (MQ=60)

                                              GGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAA                                                 <  SRR4302540.7498796/94‑1 (MQ=60)

                                              GGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAA                                                 <  SRR4302540.1121639/94‑1 (MQ=60)

                                              GGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAA                                                 <  SRR4302540.7426179/94‑1 (MQ=60)

                                               GGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAC                                                <  SRR4302540.8214274/94‑1 (MQ=60)

                                               GGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAC                                                <  SRR4302540.1719617/94‑1 (MQ=60)

                                               GGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAC                                                >  SRR4302540.5566148/1‑94 (MQ=60)

                                               GGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAC                                                <  SRR4302540.5104358/94‑1 (MQ=60)

                                               GGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAAC                                                <  SRR4302540.1856263/94‑1 (MQ=60)

                                                GCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAGCG                                               >  SRR4302540.8608320/1‑94 (MQ=60)

                                                 CGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGC                                              >  SRR4302540.7604957/1‑94 (MQ=60)

                                                 CGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGC                                              <  SRR4302540.7129917/94‑1 (MQ=60)

                                                  GACACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCC                                             <  SRR4302540.1594530/94‑1 (MQ=60)

                                                  GAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCC                                             >  SRR4302540.7977728/1‑94 (MQ=60)

                                                   GAACATTTTGATGTTGACGCCTTCGATGCCCCCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGACCTGGAGTTTGAAAACTTCAACGCCG                                            <  SRR4302540.314202/94‑1 (MQ=60)

                                                   AAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCG                                            >  SRR4302540.297108/1‑94 (MQ=60)

                                                    AACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGC                                           >  SRR4302540.6453911/1‑94 (MQ=60)

                                                    AACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGC                                           <  SRR4302540.2356494/94‑1 (MQ=60)

                                                     ACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCG                                          <  SRR4302540.5169823/94‑1 (MQ=60)

                                                     ACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCG                                          <  SRR4302540.9988344/94‑1 (MQ=60)

                                                      CATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGT                                         >  SRR4302540.1223552/1‑94 (MQ=60)

                                                      CATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGT                                         <  SRR4302540.3560042/94‑1 (MQ=60)

                                                       ATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTC                                        <  SRR4302540.7160863/94‑1 (MQ=60)

                                                        TTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCG                                       >  SRR4302540.7861576/1‑94 (MQ=60)

                                                         TTTGATGTGGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGG                                      <  SRR4302540.3935727/94‑1 (MQ=60)

                                                           TGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTC                                    >  SRR4302540.10151337/1‑94 (MQ=60)

                                                           TGATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTC                                    >  SRR4302540.8704549/1‑94 (MQ=60)

                                                             ATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAA                                  >  SRR4302540.554558/1‑94 (MQ=60)

                                                             ATGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAA                                  >  SRR4302540.8908720/1‑94 (MQ=60)

                                                              TGTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAAT                                 >  SRR4302540.4050658/1‑94 (MQ=60)

                                                               GTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATA                                >  SRR4302540.9912677/1‑94 (MQ=60)

                                                               GTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATA                                <  SRR4302540.940380/94‑1 (MQ=60)

                                                               GTTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATA                                >  SRR4302540.8905662/1‑94 (MQ=60)

                                                                TTGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATAT                               <  SRR4302540.5200543/94‑1 (MQ=60)

                                                                 tgcccCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGTTGGTGGCGTAGGCGAACTGGAGTTTGAAACCTGCAACGCCGCGTCGGTCAATATC                              <  SRR4302540.6754418/89‑1 (MQ=60)

                                                                 TGACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATC                              <  SRR4302540.7614699/94‑1 (MQ=60)

                                                                 TGACGCCTTCGATGCCCCCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATC                              <  SRR4302540.7614700/94‑1 (MQ=60)

                                                                  GACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCA                             <  SRR4302540.3799618/94‑1 (MQ=60)

                                                                  GACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCA                             >  SRR4302540.629597/1‑94 (MQ=60)

                                                                   ACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAA                            >  SRR4302540.3735379/1‑94 (MQ=60)

                                                                   ACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAA                            <  SRR4302540.3667578/94‑1 (MQ=60)

                                                                   ACGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAA                            <  SRR4302540.463997/94‑1 (MQ=60)

                                                                    CGCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAA                           >  SRR4302540.4786650/1‑94 (MQ=60)

                                                                     GCCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAA                          >  SRR4302540.9006816/1‑94 (MQ=60)

                                                                      CCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAT                         <  SRR4302540.5394102/94‑1 (MQ=60)

                                                                      CCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAT                         >  SRR4302540.7205556/1‑94 (MQ=60)

                                                                      CCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAT                         >  SRR4302540.6968429/1‑94 (MQ=60)

                                                                      CCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAT                         <  SRR4302540.4555477/94‑1 (MQ=60)

                                                                      CCTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAAT                         >  SRR4302540.5752360/1‑94 (MQ=60)

                                                                       CTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATT                        >  SRR4302540.8517621/1‑94 (MQ=60)

                                                                       CTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATT                        <  SRR4302540.4969045/94‑1 (MQ=60)

                                                                       CTTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATT                        >  SRR4302540.5258316/1‑94 (MQ=60)

                                                                        TTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTG                       <  SRR4302540.8895134/94‑1 (MQ=60)

                                                                        TTCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTG                       <  SRR4302540.4489845/94‑1 (MQ=60)

                                                                         TCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGT                      >  SRR4302540.2324152/1‑94 (MQ=60)

                                                                         TCGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGT                      >  SRR4302540.2881095/1‑94 (MQ=60)

                                                                          CGATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGTGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTC                     <  SRR4302540.3205939/94‑1 (MQ=60)

                                                                           GATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCG                    >  SRR4302540.2326582/1‑94 (MQ=60)

                                                                            ATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTATGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGG                   <  SRR4302540.8543014/94‑1 (MQ=60)

                                                                            ATGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGG                   <  SRR4302540.8543012/94‑1 (MQ=60)

                                                                             TGCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGT                  <  SRR4302540.6076050/94‑1 (MQ=60)

                                                                              GCCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTA                 >  SRR4302540.8411644/1‑94 (MQ=60)

                                                                              GCCCGCTGGGCTTACGCTGGTGATGGTGGCGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGCCGGGCAATATCAAAATTGTCGGTA                 >  SRR4302540.6967892/1‑94 (MQ=60)

                                                                               CCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAA                <  SRR4302540.2117046/94‑1 (MQ=60)

                                                                               CCCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAA                <  SRR4302540.2117045/94‑1 (MQ=60)

                                                                                CCGCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAAC               >  SRR4302540.1265415/1‑94 (MQ=60)

                                                                                  GCTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAA             <  SRR4302540.8323927/94‑1 (MQ=60)

                                                                                   CTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAT            <  SRR4302540.6609797/94‑1 (MQ=60)

                                                                                   CTGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAAT            <  SRR4302540.6746584/94‑1 (MQ=60)

                                                                                    TGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATG           <  SRR4302540.6062139/94‑1 (MQ=60)

                                                                                    TGGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATG           <  SRR4302540.3858367/94‑1 (MQ=60)

                                                                                     GGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGT          <  SRR4302540.836452/94‑1 (MQ=60)

                                                                                     GGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGT          <  SRR4302540.76648/94‑1 (MQ=60)

                                                                                     GGGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGT          >  SRR4302540.3165346/1‑94 (MQ=60)

                                                                                      GGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTT         <  SRR4302540.5990209/94‑1 (MQ=60)

                                                                                      GGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTT         >  SRR4302540.4446836/1‑94 (MQ=60)

                                                                                      GGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTT         <  SRR4302540.567800/94‑1 (MQ=60)

                                                                                      GGCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACCGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTT         <  SRR4302540.4256020/94‑1 (MQ=60)

                                                                                       GCTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTC        <  SRR4302540.5930830/94‑1 (MQ=60)

                                                                                        CTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCA       >  SRR4302540.3624479/1‑94 (MQ=60)

                                                                                        CTTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCA       >  SRR4302540.8376786/1‑94 (MQ=60)

                                                                                         TTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT      <  SRR4302540.1502718/94‑1 (MQ=60)

                                                                                         TTACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCAT      >  SRR4302540.9993734/1‑94 (MQ=60)

                                                                                          TACGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGGTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATC     >  SRR4302540.194269/1‑94 (MQ=60)

                                                                                            CGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCG   <  SRR4302540.8466629/94‑1 (MQ=60)

                                                                                            CGCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCG   >  SRR4302540.6969031/1‑94 (MQ=60)

                                                                                             GCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGTTAACAATGTTCATCGGG  >  SRR4302540.2109448/1‑94 (MQ=60)

                                                                                             GCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGG  >  SRR4302540.366193/1‑94 (MQ=60)

                                                                                             GCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGG  >  SRR4302540.2109449/1‑94 (MQ=60)

                                                                                             GCTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGG  >  SRR4302540.5816523/1‑94 (MQ=60)

                                                                                             GCTGTTGATGGTGGTGGCATAGGCGAACTGGAGTTTGAAAACTTCCACGCCGGGTCGGTCAATATCAAAATTCTCGGTAACAATGTTCATCCGG  <  SRR4302540.5596898/94‑1 (MQ=60)

GGTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGG  >  NC_000913/1185553‑1185739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`