Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,243,418 T→C V111V (GTA→GTG)  ycgR ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,243,4180TC99.6% 889.7 / ‑4.8 277V111V (GTA→GTG) ycgRhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (151/125);  minor base A (1/0);  total (152/125)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.43e-01

Only 100 of 285 total aligned reads displayed.

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507
                                                                                          |                                                                                         
gAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCAc                                                                                         >  1:9898267/1‑93 (MQ=255)
   acgtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaaa                                                                                      >  1:5606599/1‑93 (MQ=255)
    cgtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAc                                                                                     <  1:6134090/93‑1 (MQ=255)
    cgtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAc                                                                                     >  1:8978805/1‑93 (MQ=255)
      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  1:9729997/93‑1 (MQ=255)
       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  >  2:9065107/1‑93 (MQ=255)
           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:5944772/1‑93 (MQ=255)
           taCTGTTATCCGCCAGTTTGGTATGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  2:6406330/1‑93 (MQ=255)
            aCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGt                                                                             >  1:1089404/1‑93 (MQ=255)
             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            >  2:571359/1‑93 (MQ=255)
              tGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTgg                                                                           <  1:4416890/93‑1 (MQ=255)
               gTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGCggg                                                                          >  1:9785287/1‑93 (MQ=255)
                ttgtCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         <  1:5156823/90‑1 (MQ=255)
                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         >  1:1349367/1‑93 (MQ=255)
                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGCGGGa                                                                         <  2:5277743/93‑1 (MQ=255)
                 tATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAg                                                                        >  1:6363024/1‑93 (MQ=255)
                 tATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAg                                                                        >  2:8786851/1‑93 (MQ=255)
                  aTCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAgg                                                                       >  2:10015431/1‑93 (MQ=255)
                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGc                                                                      <  2:6964208/93‑1 (MQ=255)
                    ccGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcg                                                                     >  2:9650071/1‑93 (MQ=255)
                     cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcgg                                                                    <  1:4936177/93‑1 (MQ=255)
                      gCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggt                                                                   >  1:3868775/1‑93 (MQ=255)
                      gCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGCGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCGCAAACCATAAGGTGGGAGGcggt                                                                   >  2:5509512/1‑93 (MQ=255)
                       ccAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggta                                                                  >  2:5069744/1‑93 (MQ=255)
                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 <  2:6643425/93‑1 (MQ=255)
                         aGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacg                                                                >  2:3634058/1‑93 (MQ=255)
                         aGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacg                                                                <  2:8386492/93‑1 (MQ=255)
                         aGTGTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacg                                                                <  1:5306511/93‑1 (MQ=255)
                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               <  1:4178983/93‑1 (MQ=255)
                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGGGGGAGGcggtacgg                                                               >  2:1931066/1‑93 (MQ=255)
                           tttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacggt                                                              <  1:10030735/93‑1 (MQ=255)
                           tttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgga                                                              >  2:8015517/1‑92 (MQ=255)
                            ttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacggta                                                             >  1:6069827/1‑93 (MQ=255)
                              ggTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaat                                                           >  1:5745356/1‑93 (MQ=255)
                              ggTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaat                                                           >  1:6950170/1‑93 (MQ=255)
                               gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaata                                                          >  2:9021262/1‑93 (MQ=255)
                                tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCCTAAGGTGGGAGGCGGTACGGtagtaa                                                         >  1:2439466/1‑93 (MQ=255)
                                   ggCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATg                                                      >  1:2398131/1‑93 (MQ=255)
                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     <  2:8670104/93‑1 (MQ=255)
                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     >  2:2984448/1‑93 (MQ=255)
                                      aaaaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCg                                                   <  1:8709885/93‑1 (MQ=255)
                                      aaaaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCg                                                   <  2:4882424/93‑1 (MQ=255)
                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                <  2:8481965/93‑1 (MQ=255)
                                          aTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAg                                               >  1:1566364/1‑93 (MQ=255)
                                           tAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGc                                              <  1:6749765/93‑1 (MQ=255)
                                            aaGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCt                                             <  2:5449888/93‑1 (MQ=255)
                                            aaGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCt                                             <  1:4128632/93‑1 (MQ=255)
                                               gCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGGACGGTAATAAATGCCGGAAGCTGCa                                          >  2:1213838/1‑93 (MQ=255)
                                                cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCaa                                         <  2:5960692/93‑1 (MQ=255)
                                                cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCaa                                         >  2:7634533/1‑93 (MQ=255)
                                                cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGATAATAAATGCCGGAAGCTGCaa                                         <  2:2419732/93‑1 (MQ=255)
                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  1:3438092/1‑93 (MQ=255)
                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  2:2133248/1‑93 (MQ=255)
                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       <  1:5686779/93‑1 (MQ=255)
                                                   aTGGAGTGGGACGGAGATGCGTAAATATCGGTGTCGTTGCACAATCCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTa                                      <  2:7847392/93‑1 (MQ=255)
                                                     ggAGTGGGGCGTAGAGGCGGAAATATCGGCGTCTTAGCACAAACCATAAGGGGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAtt                                    <  2:7083189/93‑1 (MQ=255)
                                                        gTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAc                                 >  2:2192521/1‑93 (MQ=255)
                                                         tGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAct                                <  2:4553935/93‑1 (MQ=255)
                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               <  2:7174589/93‑1 (MQ=255)
                                                           gggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  2:1738935/93‑1 (MQ=255)
                                                           gggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  1:4638910/93‑1 (MQ=255)
                                                            ggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctg                             >  1:9068664/1‑93 (MQ=255)
                                                             gCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgc                            >  2:9287697/1‑93 (MQ=255)
                                                              gggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgct                           <  1:2507521/92‑1 (MQ=255)
                                                              cGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATCAATGCCGGAAGCTGCAAGTATTCACTctgct                           >  1:9860663/1‑93 (MQ=255)
                                                               ggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg                          >  1:963294/1‑93 (MQ=255)
                                                               ggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg                          <  2:556691/93‑1 (MQ=255)
                                                                  gaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAg                       >  2:2780338/1‑93 (MQ=255)
                                                                  gaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAg                       >  2:579452/1‑93 (MQ=255)
                                                                    tGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     >  1:5235583/1‑93 (MQ=255)
                                                                    tGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     >  2:6693111/1‑93 (MQ=255)
                                                                    tGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     >  1:839153/1‑93 (MQ=255)
                                                                     gCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttg                    >  1:2909600/1‑93 (MQ=255)
                                                                       ggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgtt                  >  1:6571461/1‑93 (MQ=255)
                                                                       ggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgtt                  <  1:6632433/93‑1 (MQ=255)
                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTACTAAATGCCGGAAGGTGCAAGTATTCACTCTGCTGTAGGTGTTc                 >  2:8860542/1‑93 (MQ=255)
                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 <  2:6137149/93‑1 (MQ=255)
                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:9519526/1‑93 (MQ=255)
                                                                          aaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCaa               <  2:6760627/93‑1 (MQ=255)
                                                                           atatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc              >  2:7393600/1‑93 (MQ=255)
                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             >  2:9921089/1‑93 (MQ=255)
                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             <  1:2644799/93‑1 (MQ=255)
                                                                               cGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTa          <  2:3091006/93‑1 (MQ=255)
                                                                               cGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTa          >  1:7699983/1‑93 (MQ=255)
                                                                                ggCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaa         <  1:3337504/93‑1 (MQ=255)
                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        <  1:5397345/93‑1 (MQ=255)
                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        >  1:1800384/1‑93 (MQ=255)
                                                                                  cgtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc       <  1:3726349/93‑1 (MQ=255)
                                                                                   gtcgtTGCACAAGCCATAAGGTGGTAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      <  1:8528791/93‑1 (MQ=255)
                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      >  1:8150936/1‑93 (MQ=255)
                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATACATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  1:9197372/1‑93 (MQ=255)
                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  2:1311692/1‑93 (MQ=255)
                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   >  1:5053864/1‑93 (MQ=255)
                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGGTGTTCAACAGTAAACTCGa   >  2:9735641/1‑93 (MQ=255)
                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGGATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   >  1:2181714/1‑93 (MQ=255)
                                                                                      gtTGAACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   >  2:6488485/1‑93 (MQ=255)
                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  <  2:769520/93‑1 (MQ=255)
                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  <  2:773874/93‑1 (MQ=255)
                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  >  2:4052972/1‑93 (MQ=255)
                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  <  1:7351788/93‑1 (MQ=255)
                                                                                          |                                                                                         
GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCGGAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTC  >  NC_000913/1243325‑1243511
                                                                                             |                                                                                             
GCGGAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGC                                                                                               <  SRR4302540.9767088/94‑1 (MQ=60)
  GGAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCAC                                                                                             >  SRR4302540.10013889/1‑94 (MQ=60)
  GGAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCAC                                                                                             >  SRR4302540.536748/1‑94 (MQ=60)
     AACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAA                                                                                          >  SRR4302540.5668290/1‑94 (MQ=60)
     AACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAA                                                                                          >  SRR4302540.5668291/1‑94 (MQ=60)
      ACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAC                                                                                         >  SRR4302540.9085744/1‑94 (MQ=60)
      ACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAC                                                                                         >  SRR4302540.5798687/1‑94 (MQ=60)
       CGTACTGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACC                                                                                        <  SRR4302540.9897446/94‑1 (MQ=60)
       CGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACC                                                                                        <  SRR4302540.9897445/94‑1 (MQ=60)
       CGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACC                                                                                        <  SRR4302540.6202413/94‑1 (MQ=60)
       CGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACC                                                                                        <  SRR4302540.6202412/94‑1 (MQ=60)
        GTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCA                                                                                       <  SRR4302540.7097153/94‑1 (MQ=60)
        GTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCA                                                                                       >  SRR4302540.9406338/1‑94 (MQ=60)
        GTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCA                                                                                       >  SRR4302540.1632360/1‑94 (MQ=60)
         TAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAT                                                                                      <  SRR4302540.9844257/94‑1 (MQ=60)
             gtactagtacccgcaAGTTTGTTCTGGCAAAAATAAGGCGGATTGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGG                                                                                  <  SRR4302540.4730168/79‑1 (MQ=60)
             GTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGG                                                                                  >  SRR4302540.6010487/1‑94 (MQ=60)
             GTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGG                                                                                  >  SRR4302540.4533975/1‑94 (MQ=60)
              TACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGT                                                                                 >  SRR4302540.1100585/1‑94 (MQ=60)
              TACTGTTATCCGCCAGTGTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGT                                                                                 <  SRR4302540.4079132/94‑1 (MQ=60)
              TACAGTTATCCGCCAGTGTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGT                                                                                 <  SRR4302540.5882292/94‑1 (MQ=60)
               ACTGTGATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTG                                                                                <  SRR4302540.9770646/94‑1 (MQ=60)
                 TGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGG                                                                              <  SRR4302540.4464750/94‑1 (MQ=60)
                 TGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGCGGG                                                                              >  SRR4302540.9899946/1‑94 (MQ=60)
                 TGTTATCCGCCAGTTTGGTATGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGCAATATCGGCGTCGTTGCACAAACCATAAGTTGGG                                                                              >  SRR4302540.9067300/1‑94 (MQ=60)
                  gtgagCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGA                                                                             <  SRR4302540.8944832/89‑1 (MQ=60)
                  GTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGG                                                                             >  SRR4302540.7667639/1‑94 (MQ=60)
                  GTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGA                                                                             <  SRR4302540.5701365/94‑1 (MQ=60)
                  GTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGA                                                                             <  SRR4302540.5359397/94‑1 (MQ=60)
                  GTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGA                                                                             >  SRR4302540.1363547/1‑94 (MQ=60)
                   TTGTCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAG                                                                            <  SRR4302540.5212821/94‑1 (MQ=60)
                   TTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAG                                                                            >  SRR4302540.6433877/1‑94 (MQ=60)
                    TATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATCAGGTGGGAGG                                                                           >  SRR4302540.5493583/1‑94 (MQ=60)
                      TCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCG                                                                         <  SRR4302540.8343517/94‑1 (MQ=60)
                       CCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGG                                                                        >  SRR4302540.4207518/1‑94 (MQ=60)
                        CGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGT                                                                       <  SRR4302540.5913800/94‑1 (MQ=60)
                        CGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGT                                                                       >  SRR4302540.3910831/1‑94 (MQ=60)
                        CGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGT                                                                       <  SRR4302540.9206806/94‑1 (MQ=60)
                        CGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGT                                                                       <  SRR4302540.4989425/94‑1 (MQ=60)
                           CAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACG                                                                    >  SRR4302540.1404701/1‑94 (MQ=60)
                            AGTGTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGG                                                                   <  SRR4302540.5364580/94‑1 (MQ=60)
                             GTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGT                                                                  <  SRR4302540.4224359/94‑1 (MQ=60)
                              TTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTA                                                                 <  SRR4302540.10147419/94‑1 (MQ=60)
                              TTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTA                                                                 >  SRR4302540.6137309/1‑94 (MQ=60)
                               TTGTTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGATATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAA                                                                <  SRR4302540.7359794/94‑1 (MQ=60)
                                TGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAAT                                                               >  SRR4302540.7027505/1‑94 (MQ=60)
                                TGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAAT                                                               >  SRR4302540.5808709/1‑94 (MQ=60)
                                 GGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGGGGGAGGCGGTACGGTAATA                                                              >  SRR4302540.1081936/1‑94 (MQ=60)
                                  GTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCCTAAGGTGGGAGGCGGTACGGTAGTAA                                                             >  SRR4302540.2465731/1‑94 (MQ=60)
                                  GTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAA                                                             >  SRR4302540.10000396/1‑94 (MQ=60)
                                    CTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAAT                                                           <  SRR4302540.8045176/94‑1 (MQ=60)
                                    CTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAAT                                                           <  SRR4302540.5239208/94‑1 (MQ=60)
                                     TGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATG                                                          >  SRR4302540.2423974/1‑94 (MQ=60)
                                      GGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGC                                                         >  SRR4302540.6675585/1‑94 (MQ=60)
                                      GGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGC                                                         >  SRR4302540.5710699/1‑94 (MQ=60)
                                        CAAAAATAAGGCGAATGAAATGGGGCGGAGATGAGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGACGGTACGGTAATAAATGCCG                                                       <  SRR4302540.9100034/94‑1 (MQ=60)
                                         AAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGG                                                      >  SRR4302540.6081112/1‑94 (MQ=60)
                                         AAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGG                                                      >  SRR4302540.7725177/1‑94 (MQ=60)
                                         AAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGG                                                      <  SRR4302540.8810987/94‑1 (MQ=60)
                                           AAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAA                                                    <  SRR4302540.4760377/94‑1 (MQ=60)
                                            AATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAG                                                   >  SRR4302540.1583549/1‑94 (MQ=60)
                                            AATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAG                                                   <  SRR4302540.6887953/94‑1 (MQ=60)
                                             ATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGC                                                  <  SRR4302540.8620437/94‑1 (MQ=60)
                                              TAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCT                                                 <  SRR4302540.6824341/94‑1 (MQ=60)
                                               AAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGCAGCTG                                                >  SRR4302540.3728040/1‑94 (MQ=60)
                                               AAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTG                                                >  SRR4302540.1577210/1‑94 (MQ=60)
                                               AAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTG                                                <  SRR4302540.4173256/94‑1 (MQ=60)
                                               AAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTG                                                >  SRR4302540.3728041/1‑94 (MQ=60)
                                                AGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGC                                               <  SRR4302540.2469942/94‑1 (MQ=60)
                                                AGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGC                                               <  SRR4302540.4013653/94‑1 (MQ=60)
                                                AGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGC                                               >  SRR4302540.5174676/1‑94 (MQ=60)
                                                 GGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCA                                              <  SRR4302540.6728688/94‑1 (MQ=60)
                                                   CGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAG                                            >  SRR4302540.6459336/1‑94 (MQ=60)
                                                    GGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGT                                           >  SRR4302540.5018000/1‑94 (MQ=60)
                                                    GGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGT                                           >  SRR4302540.2486484/1‑94 (MQ=60)
                                                    GGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGT                                           >  SRR4302540.3475463/1‑94 (MQ=60)
                                                    GGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGT                                           >  SRR4302540.3475462/1‑94 (MQ=60)
                                                    GGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGT                                           >  SRR4302540.2031974/1‑94 (MQ=60)
                                                     GATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTA                                          <  SRR4302540.5749377/94‑1 (MQ=60)
                                                      ATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAT                                         >  SRR4302540.8560856/1‑94 (MQ=60)
                                                        GGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTC                                       <  SRR4302540.6404109/94‑1 (MQ=60)
                                                          AGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATACATGCCGGAAGCTGCAAGTATTCAC                                     >  SRR4302540.988742/1‑94 (MQ=60)
                                                          AGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAC                                     >  SRR4302540.236872/1‑94 (MQ=60)
                                                           GTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACT                                    >  SRR4302540.6324951/1‑94 (MQ=60)
                                                           GTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCAGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACT                                    >  SRR4302540.9756027/1‑94 (MQ=60)
                                                            TGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTC                                   <  SRR4302540.2448836/94‑1 (MQ=60)
                                                             GGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCT                                  <  SRR4302540.4632335/94‑1 (MQ=60)
                                                             GGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCT                                  >  SRR4302540.5268086/1‑94 (MQ=60)
                                                              GGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTG                                 >  SRR4302540.9177557/1‑94 (MQ=60)
                                                              GGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTG                                 <  SRR4302540.4688579/94‑1 (MQ=60)
                                                                GCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATCAATGCCGGAAGCTGCAAGTATTCACTCTGCT                               >  SRR4302540.9975871/1‑94 (MQ=60)
                                                                GCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCT                               >  SRR4302540.9975870/1‑94 (MQ=60)
                                                                 ggtAGATGCGGAAAAATCGGCGTCGTTGCCAAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTG                              <  SRR4302540.5060621/91‑1 (MQ=60)
                                                                 GGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTG                              <  SRR4302540.2534602/94‑1 (MQ=60)
                                                                 CGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTG                              >  SRR4302540.9369859/1‑94 (MQ=60)
                                                                 CGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTG                              >  SRR4302540.973247/1‑94 (MQ=60)
                                                                    AGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAG                           <  SRR4302540.419806/94‑1 (MQ=60)
                                                                     GATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGT                          >  SRR4302540.2225488/1‑94 (MQ=60)
                                                                     GATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGT                          >  SRR4302540.3254338/1‑94 (MQ=60)
                                                                      ATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTT                         >  SRR4302540.848053/1‑94 (MQ=60)
                                                                      ATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTT                         <  SRR4302540.4283439/94‑1 (MQ=60)
                                                                      ATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTT                         >  SRR4302540.5292695/1‑94 (MQ=60)
                                                                       TGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTG                        >  SRR4302540.2941396/1‑94 (MQ=60)
                                                                       TGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTG                        <  SRR4302540.8681157/94‑1 (MQ=60)
                                                                       TGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTG                        >  SRR4302540.5339219/1‑94 (MQ=60)
                                                                        GCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGT                       >  SRR4302540.171206/1‑94 (MQ=60)
                                                                         CGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTT                      >  SRR4302540.6644274/1‑94 (MQ=60)
                                                                          GGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTC                     >  SRR4302540.3388573/1‑94 (MQ=60)
                                                                          GGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTC                     <  SRR4302540.6705843/94‑1 (MQ=60)
                                                                          GGAAATATCGGCGTCGTTGCACAAACCATAAGGAGGGAGGCGGTACGGTAATAAATGCCGGAAGCTTCAAGTATTCACTCTGCTGTAGTTGTTC                     >  SRR4302540.6801020/1‑94 (MQ=60)
                                                                           GAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCA                    >  SRR4302540.8917561/1‑94 (MQ=60)
                                                                            AAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAA                   <  SRR4302540.1120845/94‑1 (MQ=60)
                                                                             AATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAC                  >  SRR4302540.1140165/1‑94 (MQ=60)
                                                                              ATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACA                 >  SRR4302540.2585884/1‑94 (MQ=60)
                                                                              ATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGAATTCACTCTGCTGTAGTTGTTCAACA                 >  SRR4302540.2585883/1‑94 (MQ=60)
                                                                               TATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAG                >  SRR4302540.6058520/1‑94 (MQ=60)
                                                                               TATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAG                <  SRR4302540.2673490/94‑1 (MQ=60)
                                                                                ATCGGCGTCGTTGCCCAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGT               <  SRR4302540.2808931/94‑1 (MQ=60)
                                                                                ATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGT               <  SRR4302540.4399451/94‑1 (MQ=60)
                                                                                ATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGT               <  SRR4302540.8434412/94‑1 (MQ=60)
                                                                                 TCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTA              >  SRR4302540.7787906/1‑94 (MQ=60)
                                                                                   GGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAA            >  SRR4302540.1819979/1‑94 (MQ=60)
                                                                                   GGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAA            <  SRR4302540.3374154/94‑1 (MQ=60)
                                                                                    GCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAC           <  SRR4302540.5456689/94‑1 (MQ=60)
                                                                                    GCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAC           <  SRR4302540.2857311/94‑1 (MQ=60)
                                                                                    GCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAC           >  SRR4302540.6645875/1‑94 (MQ=60)
                                                                                    GCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAC           <  SRR4302540.6186555/94‑1 (MQ=60)
                                                                                     CGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACT          >  SRR4302540.8245560/1‑94 (MQ=60)
                                                                                     CGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACT          <  SRR4302540.3767010/94‑1 (MQ=60)
                                                                                     CGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACT          <  SRR4302540.8845706/94‑1 (MQ=60)
                                                                                     CGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACT          >  SRR4302540.10016172/1‑94 (MQ=60)
                                                                                     CGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGGAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTcaacc          >  SRR4302540.9179077/1‑89 (MQ=60)
                                                                                      GTCGTTGCACAAGCCATAAGGTGGTAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         <  SRR4302540.8627890/94‑1 (MQ=60)
                                                                                      GTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATACATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         >  SRR4302540.9307700/1‑94 (MQ=60)
                                                                                      GTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         >  SRR4302540.9995803/1‑94 (MQ=60)
                                                                                      GTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         >  SRR4302540.3234894/1‑94 (MQ=60)
                                                                                      GTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         >  SRR4302540.10063848/1‑94 (MQ=60)
                                                                                      GTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTC         >  SRR4302540.6907359/1‑94 (MQ=60)
                                                                                        CGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGA       <  SRR4302540.800499/94‑1 (MQ=60)
                                                                                        CGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGA       >  SRR4302540.213297/1‑94 (MQ=60)
                                                                                        CGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGA       >  SRR4302540.5108499/1‑94 (MQ=60)
                                                                                        CGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGGATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGA       >  SRR4302540.2205256/1‑94 (MQ=60)
                                                                                         GTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC      >  SRR4302540.538606/1‑94 (MQ=60)
                                                                                         GTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC      >  SRR4302540.9126119/1‑94 (MQ=60)
                                                                                          TTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACT     <  SRR4302540.3807502/94‑1 (MQ=60)
                                                                                          TTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACT     <  SRR4302540.7433792/94‑1 (MQ=60)
                                                                                          TTGCACAAACCATAAGGCGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACT     <  SRR4302540.6560173/94‑1 (MQ=60)
                                                                                           TGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTGTGCTGTAGTTGTTCAACAGTAAACTCGACTT    >  SRR4302540.6487157/1‑94 (MQ=60)
                                                                                           TGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTT    >  SRR4302540.2750184/1‑94 (MQ=60)
                                                                                           TGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTT    <  SRR4302540.1227965/94‑1 (MQ=60)
                                                                                            GCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCGCTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTT   <  SRR4302540.1180120/94‑1 (MQ=60)
                                                                                            GCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTT   <  SRR4302540.4443226/94‑1 (MQ=60)
                                                                                            GCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTT   <  SRR4302540.2732518/94‑1 (MQ=60)
                                                                                            GCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTT   <  SRR4302540.4941767/94‑1 (MQ=60)
                                                                                             CACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTG  >  SRR4302540.3258710/1‑94 (MQ=60)
                                                                                             CACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTC  >  SRR4302540.3258711/1‑94 (MQ=60)
                                                                                             CACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTC  <  SRR4302540.5759974/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCGGAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGACTTTC  >  NC_000913/1243325‑1243511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑