Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,280,531 |
A→G |
Y482C (TAC→TGC) |
narG → |
nitrate reductase 1 alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,280,531 | 0 | A | G | 100.0%
| 675.2
/ NA
| 207 | Y482C (TAC→TGC) | narG | nitrate reductase 1 alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/103); total (104/103) |
Only 100 of 209 total aligned reads displayed.
TGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATT > NC_000913/1280441‑1280619
|
tgctgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCg > 1:3331534/1‑93 (MQ=255)
tgctgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCg > 2:4157642/1‑93 (MQ=255)
ctgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGt > 1:3997119/1‑93 (MQ=255)
tgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTc < 1:1058988/93‑1 (MQ=255)
tgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTc < 2:6762098/93‑1 (MQ=255)
tgcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTc < 2:9873714/93‑1 (MQ=255)
gcACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCt > 2:9825719/1‑93 (MQ=255)
cacaAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTg < 1:8305660/93‑1 (MQ=255)
caAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGa > 1:5166514/1‑93 (MQ=255)
caAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGa > 1:5051293/1‑93 (MQ=255)
caAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGa < 1:4642972/93‑1 (MQ=255)
aaaCTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGac > 2:3197221/1‑92 (MQ=255)
aaaCTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGaa < 2:8254848/93‑1 (MQ=255)
aaCTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAAc > 1:6208843/1‑93 (MQ=255)
cTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGt > 1:6715100/1‑93 (MQ=255)
cTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGt < 1:4758162/93‑1 (MQ=255)
tGCCGGTTAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTg > 2:8607693/1‑93 (MQ=255)
ggTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCt > 2:7570392/1‑93 (MQ=255)
gTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTg > 2:1895289/1‑93 (MQ=255)
gTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTg > 2:6346974/1‑93 (MQ=255)
gTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTg < 1:8017157/93‑1 (MQ=255)
gTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTg > 2:6879134/1‑93 (MQ=255)
aaaCGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAac < 2:9197602/93‑1 (MQ=255)
aaCGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAacg < 2:4711137/93‑1 (MQ=255)
ccTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGt > 2:1555879/1‑93 (MQ=255)
ccTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGt < 2:471561/93‑1 (MQ=255)
ccTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGt > 1:9811907/1‑93 (MQ=255)
cTGCAAGTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGGGGCCTGAACGACGtt > 2:5089350/1‑93 (MQ=255)
gCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTaa < 1:4304867/93‑1 (MQ=255)
gCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTaa > 1:1756607/1‑93 (MQ=255)
gCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTaa > 1:9159616/1‑93 (MQ=255)
aaCTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACt < 2:4079858/93‑1 (MQ=255)
aaCTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACt < 1:2697439/93‑1 (MQ=255)
aaCTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACt < 1:3459848/93‑1 (MQ=255)
aaCTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACt < 2:7486324/93‑1 (MQ=255)
aCTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACtg < 1:2153784/93‑1 (MQ=255)
cTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGTACGTGGCCTGAACGACGTTAACtgt < 2:9719311/93‑1 (MQ=255)
cTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACtgt < 1:7791408/93‑1 (MQ=255)
tGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAAc > 1:933397/1‑93 (MQ=255)
tGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAg > 1:7247180/1‑93 (MQ=255)
tGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAg < 2:2707009/93‑1 (MQ=255)
gcagccCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCt < 2:8532103/93‑1 (MQ=255)
gcagcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCt > 2:72705/1‑93 (MQ=255)
gcagcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCt > 2:1020964/1‑93 (MQ=255)
gcagcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCt > 1:5779430/1‑93 (MQ=255)
cagctCCGCCCTGGTGACCACCGGTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGTGCTGAACGACGTTAACTGTGCAACCAGCTa < 2:1686523/93‑1 (MQ=255)
agcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTAt < 1:5586897/93‑1 (MQ=255)
agcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTAt < 2:1837144/93‑1 (MQ=255)
gcaCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATg < 2:4390757/93‑1 (MQ=255)
caCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGa > 1:2969354/1‑93 (MQ=255)
aCCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGag > 2:8318081/1‑92 (MQ=255)
ccGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACg > 1:8902038/1‑93 (MQ=255)
ccGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACg > 2:4893967/1‑93 (MQ=255)
cGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGa < 2:8695929/93‑1 (MQ=255)
cccTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAtg > 1:5506529/1‑93 (MQ=255)
cccTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTCTGCAACCAGCTATGACGAtg > 1:2048156/1‑93 (MQ=255)
ccTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGCCGAtgt > 1:870050/1‑93 (MQ=255)
ccTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAtgt < 1:9236812/93‑1 (MQ=255)
ccTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAtgt < 2:3851482/93‑1 (MQ=255)
cTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAtgtg < 2:6227946/93‑1 (MQ=255)
cTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAtgtg > 1:8477278/1‑93 (MQ=255)
tGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGa < 1:3432198/93‑1 (MQ=255)
tGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGa > 1:4297608/1‑93 (MQ=255)
tGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGa > 2:9027239/1‑93 (MQ=255)
ggTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGaa < 1:4894506/93‑1 (MQ=255)
ggTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGaa < 2:1529863/93‑1 (MQ=255)
ggTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGaa < 1:4168343/93‑1 (MQ=255)
gTGACCACCGTTGATGATCTGAAGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGaaa < 1:2788077/93‑1 (MQ=255)
gACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGc > 2:12273/1‑93 (MQ=255)
gACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAAAGACGCTAACTGTGCAACAAGCTATGACGATGTGAAAGc > 2:5659106/1‑93 (MQ=255)
accaccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCt > 1:6290609/1‑93 (MQ=255)
accaccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCt < 1:5950530/93‑1 (MQ=255)
ccaccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCtt > 1:9740568/1‑93 (MQ=255)
ccaccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCtt > 1:4232578/1‑93 (MQ=255)
accGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTtat > 2:8094103/1‑93 (MQ=255)
ccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGATGATGTGAAAGCTtata < 2:6709745/93‑1 (MQ=255)
ccGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTtata < 2:8221719/93‑1 (MQ=255)
cGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATAc > 2:9714936/1‑93 (MQ=255)
tttATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATAccc > 1:1382304/1‑93 (MQ=255)
tttATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATAccc > 1:7932217/1‑93 (MQ=255)
ttATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATAcccc < 2:5389500/93‑1 (MQ=255)
tGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGc > 2:2598079/1‑93 (MQ=255)
gATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGcc > 2:3773104/1‑93 (MQ=255)
gATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGcc > 1:3597689/1‑93 (MQ=255)
tCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTg < 2:9876780/93‑1 (MQ=255)
tCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTg < 2:9846576/93‑1 (MQ=255)
tCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTg > 2:2007582/1‑93 (MQ=255)
cTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTgg < 2:8007596/93‑1 (MQ=255)
gctgCTGCCAATCTGCGGTCGGGATCGTCGCCTGAACGACGTTACCTGTGCAACCAGCTATCACGATGTGAAAGCTTATGCCCCGGCCTGGGc < 2:3982035/90‑1 (MQ=255)
aCGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGcc < 2:2397689/93‑1 (MQ=255)
aCGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGcc > 1:7545166/1‑93 (MQ=255)
cGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCg > 1:2194844/1‑93 (MQ=255)
cGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCg > 2:3529213/1‑93 (MQ=255)
gCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGa > 1:1678569/1‑93 (MQ=255)
gCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGa < 2:5792735/93‑1 (MQ=255)
cAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGa > 2:841835/1‑93 (MQ=255)
aaaCTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGAt < 1:4411463/93‑1 (MQ=255)
aaCTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGAtt > 2:7251222/1‑93 (MQ=255)
aaCTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGAtt > 2:3070713/1‑93 (MQ=255)
aaCTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGAtt > 1:2611826/1‑93 (MQ=255)
|
TGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATT > NC_000913/1280441‑1280619
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGG > NC_000913/1280438‑1280624
|
TGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTG > SRR4302540.9464278/1‑94 (MQ=60)
TGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTG < SRR4302540.5153028/94‑1 (MQ=60)
CTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCG > SRR4302540.4474974/1‑94 (MQ=60)
CTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCG > SRR4302540.3368112/1‑94 (MQ=60)
TGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGG > SRR4302540.6314564/1‑94 (MQ=60)
GCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGT > SRR4302540.4040140/1‑94 (MQ=60)
CTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCACACTGCGGTC > SRR4302540.4663289/1‑94 (MQ=60)
TGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCT < SRR4302540.1069768/94‑1 (MQ=60)
TGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCT < SRR4302540.2816993/94‑1 (MQ=60)
CGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCT < SRR4302540.5201946/94‑1 (MQ=60)
CACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGG > SRR4302540.3902085/1‑94 (MQ=60)
CACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGG < SRR4302540.8402102/94‑1 (MQ=60)
CACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGG < SRR4302540.2095603/94‑1 (MQ=60)
ACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGA > SRR4302540.5222705/1‑94 (MQ=60)
ACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGA > SRR4302540.5105906/1‑94 (MQ=60)
CAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAA < SRR4302540.4692678/94‑1 (MQ=60)
CAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAA < SRR4302540.4692677/94‑1 (MQ=60)
AAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAAC > SRR4302540.6277946/1‑94 (MQ=60)
AAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAAC > SRR4302540.3443898/1‑94 (MQ=60)
AAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAAC < SRR4302540.4860483/94‑1 (MQ=60)
ACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGT > SRR4302540.6789186/1‑94 (MQ=60)
CTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTG < SRR4302540.4808936/94‑1 (MQ=60)
CTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTG > SRR4302540.9079325/1‑94 (MQ=60)
GCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGC > SRR4302540.9829081/1‑94 (MQ=60)
GGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTG > SRR4302540.5382995/1‑94 (MQ=60)
GTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGA < SRR4302540.8110404/94‑1 (MQ=60)
TGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAA < SRR4302540.8278444/94‑1 (MQ=60)
ACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGAC > SRR4302540.1346433/1‑94 (MQ=60)
GCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGT > SRR4302540.9926737/1‑94 (MQ=60)
TGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAA > SRR4302540.1775640/1‑94 (MQ=60)
TGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAA > SRR4302540.9269556/1‑94 (MQ=60)
GCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAAC < SRR4302540.4351722/94‑1 (MQ=60)
AACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTG < SRR4302540.3497506/94‑1 (MQ=60)
AACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTG < SRR4302540.2726551/94‑1 (MQ=60)
AACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTG > SRR4302540.3052887/1‑94 (MQ=60)
ACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGT < SRR4302540.2176954/94‑1 (MQ=60)
atggaTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGACCGTGGCCTGAACGACGTTAACTGTG < SRR4302540.1478323/89‑1 (MQ=60)
CTGGCTGATGGCAGCACCGCCCTGGTGACCACCTTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTG < SRR4302540.5000821/94‑1 (MQ=60)
CTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTG < SRR4302540.7882485/94‑1 (MQ=60)
CTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAAC > SRR4302540.943192/1‑94 (MQ=60)
ttatgtcagcgcaGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGGCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACC < SRR4302540.8474396/81‑1 (MQ=60)
ATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAG > SRR4302540.7328033/1‑94 (MQ=60)
ATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAG < SRR4302540.2947459/94‑1 (MQ=60)
GGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCT > SRR4302540.5843275/1‑94 (MQ=60)
GCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTA < SRR4302540.3474975/94‑1 (MQ=60)
AGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATG > SRR4302540.802091/1‑94 (MQ=60)
AGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATG < SRR4302540.5648390/94‑1 (MQ=60)
AGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATG < SRR4302540.982169/94‑1 (MQ=60)
GCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGA > SRR4302540.3002149/1‑94 (MQ=60)
ACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACG > SRR4302540.8966044/1‑94 (MQ=60)
ACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACG > SRR4302540.9005090/1‑94 (MQ=60)
CGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGAT < SRR4302540.9433635/94‑1 (MQ=60)
GCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATG > SRR4302540.5567174/1‑94 (MQ=60)
GCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATG > SRR4302540.6091376/1‑94 (MQ=60)
GCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTCTGCAACCAGCTATGACGATG > SRR4302540.2070214/1‑94 (MQ=60)
CCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGCCGATGT > SRR4302540.879287/1‑94 (MQ=60)
CCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGT < SRR4302540.5694206/94‑1 (MQ=60)
CCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTG > SRR4302540.8575738/1‑94 (MQ=60)
CCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTG < SRR4302540.796820/94‑1 (MQ=60)
CCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTG < SRR4302540.9347478/94‑1 (MQ=60)
CTGGTGACCACCGTTTATGGTCTGACGCTGGCAAACTGCGGGCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGA > SRR4302540.4344382/1‑94 (MQ=60)
CTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGA > SRR4302540.7805954/1‑94 (MQ=60)
CTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGA > SRR4302540.4344381/1‑94 (MQ=60)
TGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAA < SRR4302540.3469505/94‑1 (MQ=60)
TGGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAA < SRR4302540.3469506/94‑1 (MQ=60)
GGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAA < SRR4302540.4947141/94‑1 (MQ=60)
GGTGACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAA < SRR4302540.4213543/94‑1 (MQ=60)
GTGACCACCGTTGATGATCTGAAGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAG < SRR4302540.2818186/94‑1 (MQ=60)
GACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCT < SRR4302540.2197721/94‑1 (MQ=60)
GACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCT > SRR4302540.6360637/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT > SRR4302540.4278647/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT > SRR4302540.1723364/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT > SRR4302540.986817/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT > SRR4302540.9854911/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT > SRR4302540.4278646/1‑94 (MQ=60)
ACCACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTT < SRR4302540.6016341/94‑1 (MQ=60)
ACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATA > SRR4302540.7560370/1‑94 (MQ=60)
ACCGTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATA > SRR4302540.4816948/1‑94 (MQ=60)
GTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCC > SRR4302540.1397060/1‑94 (MQ=60)
GTTTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCC > SRR4302540.8024675/1‑94 (MQ=60)
TTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCG > SRR4302540.7186179/1‑94 (MQ=60)
TTATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCG > SRR4302540.644681/1‑94 (MQ=60)
TATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGG < SRR4302540.4399147/94‑1 (MQ=60)
TATGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGG < SRR4302540.3532013/94‑1 (MQ=60)
TGATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCC > SRR4302540.3636996/1‑94 (MQ=60)
GATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCT < SRR4302540.2622152/94‑1 (MQ=60)
ATCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTG < SRR4302540.2008252/94‑1 (MQ=60)
TCTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGG > SRR4302540.4175951/1‑94 (MQ=60)
CTGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGG > SRR4302540.8614735/1‑94 (MQ=60)
CTGACGCTGGCAAACTGCGGTCTGGAACGGGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGG > SRR4302540.2681723/1‑94 (MQ=60)
TGACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGC > SRR4302540.5610118/1‑94 (MQ=60)
GACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTCGGACGATGTGCAAGCGTAAACCCCGCCCTGGGCC > SRR4302540.7629723/1‑94 (MQ=60)
GACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCC > SRR4302540.7629724/1‑94 (MQ=60)
ACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCG > SRR4302540.4258978/1‑94 (MQ=60)
ACGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCG > SRR4302540.2218548/1‑94 (MQ=60)
CGCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGA > SRR4302540.1696794/1‑94 (MQ=60)
GCTGGCAAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAG < SRR4302540.9296138/94‑1 (MQ=60)
AAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATT > SRR4302540.2640023/1‑94 (MQ=60)
AAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATT < SRR4302540.4459280/94‑1 (MQ=60)
AAACTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATT > SRR4302540.5992129/1‑94 (MQ=60)
CTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCCACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACC > SRR4302540.4281673/1‑94 (MQ=60)
CTGCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACC > SRR4302540.5081071/1‑94 (MQ=60)
GCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGG < SRR4302540.5598472/94‑1 (MQ=60)
GCGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGG < SRR4302540.1020299/94‑1 (MQ=60)
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TGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGG > NC_000913/1280438‑1280624
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
