Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATCT > NC_000913/1288667‑1288853
|
ATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCC < SRR4302540.886674/94‑1 (MQ=60)
TTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTG > SRR4302540.7026222/1‑94 (MQ=60)
TGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGG > SRR4302540.9276171/1‑94 (MQ=60)
TGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGG < SRR4302540.9639825/94‑1 (MQ=60)
TGGGATGGTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGG < SRR4302540.8768027/94‑1 (MQ=60)
GGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGA < SRR4302540.185384/94‑1 (MQ=60)
GGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGA < SRR4302540.2033945/94‑1 (MQ=60)
GGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGA < SRR4302540.1698499/94‑1 (MQ=60)
GGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAA < SRR4302540.7380587/94‑1 (MQ=60)
GATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAA < SRR4302540.1801956/94‑1 (MQ=60)
ATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAAC > SRR4302540.8674278/1‑94 (MQ=60)
GTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAG > SRR4302540.1029898/1‑94 (MQ=60)
GTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAG < SRR4302540.8964157/94‑1 (MQ=60)
TTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGA < SRR4302540.1666360/94‑1 (MQ=60)
TTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGA < SRR4302540.5539710/94‑1 (MQ=60)
TTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGA < SRR4302540.531377/94‑1 (MQ=60)
TTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGA < SRR4302540.9002583/94‑1 (MQ=60)
TTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAG > SRR4302540.4343134/1‑94 (MQ=60)
TTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGA < SRR4302540.8185298/94‑1 (MQ=60)
TTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGA < SRR4302540.2537857/94‑1 (MQ=60)
TACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGAT < SRR4302540.2670646/94‑1 (MQ=60)
TACGCCTGATGGATCTATCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGAT < SRR4302540.9029288/94‑1 (MQ=60)
ACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATC < SRR4302540.8573756/94‑1 (MQ=60)
CGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCG > SRR4302540.7992025/1‑94 (MQ=60)
GCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGA > SRR4302540.2875193/1‑94 (MQ=60)
CCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAA > SRR4302540.345276/1‑94 (MQ=60)
CTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAA > SRR4302540.3334599/1‑94 (MQ=60)
CTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAA > SRR4302540.932884/1‑94 (MQ=60)
CTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAA > SRR4302540.8015234/1‑94 (MQ=60)
TGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAA > SRR4302540.5746882/1‑94 (MQ=60)
TGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAA < SRR4302540.6738379/94‑1 (MQ=60)
GATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAAT < SRR4302540.3172869/94‑1 (MQ=60)
GATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAAT < SRR4302540.2877824/94‑1 (MQ=60)
ATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGACAATT > SRR4302540.9653933/1‑94 (MQ=60)
ATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATT > SRR4302540.5743225/1‑94 (MQ=60)
ATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATT < SRR4302540.5596243/94‑1 (MQ=60)
TGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTG > SRR4302540.8162735/1‑94 (MQ=60)
GATCTCTCCTGGCCGCGCGGTGGGTTCCGGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTT < SRR4302540.6031157/94‑1 (MQ=60)
GATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTT > SRR4302540.4044301/1‑94 (MQ=60)
GATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTT < SRR4302540.8680994/94‑1 (MQ=60)
GATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTT > SRR4302540.8108891/1‑94 (MQ=60)
ATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTC > SRR4302540.2040269/1‑94 (MQ=60)
ATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTC < SRR4302540.305024/94‑1 (MQ=60)
TCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCC < SRR4302540.1133450/94‑1 (MQ=60)
TCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCC < SRR4302540.1681670/94‑1 (MQ=60)
CTCTCCTGGCAGCGCGGTGGGTTCCTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCC < SRR4302540.9056707/94‑1 (MQ=60)
CTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCT > SRR4302540.1327483/1‑94 (MQ=60)
TCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCG > SRR4302540.9529331/1‑94 (MQ=60)
TCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCG < SRR4302540.2535556/94‑1 (MQ=60)
TCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTC < SRR4302540.5280803/94‑1 (MQ=60)
CCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTAG > SRR4302540.1508363/1‑94 (MQ=60)
CTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCAAAAATTGTTCCCGTCGC > SRR4302540.2485648/1‑94 (MQ=60)
CAGCGGGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTG < SRR4302540.6152288/94‑1 (MQ=60)
CAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTG < SRR4302540.4701630/94‑1 (MQ=60)
AGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGC < SRR4302540.9551985/94‑1 (MQ=60)
AGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGC > SRR4302540.8643667/1‑94 (MQ=60)
cccgcTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATTCCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGG < SRR4302540.3168062/89‑1 (MQ=60)
CGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGG > SRR4302540.3934414/1‑94 (MQ=60)
GGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCT < SRR4302540.7781337/94‑1 (MQ=60)
CGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCT > SRR4302540.9936049/1‑94 (MQ=60)
GGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTG < SRR4302540.4071175/94‑1 (MQ=60)
GGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTG > SRR4302540.8116390/1‑94 (MQ=60)
GTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGT > SRR4302540.3875488/1‑94 (MQ=60)
GTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGT > SRR4302540.8750062/1‑94 (MQ=60)
GGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTG < SRR4302540.172944/94‑1 (MQ=60)
GGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTG > SRR4302540.5324954/1‑94 (MQ=60)
GTTACTGCGCGGCGAGCGTGTATTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCC < SRR4302540.7735793/94‑1 (MQ=60)
TTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCA < SRR4302540.614665/94‑1 (MQ=60)
TTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCA > SRR4302540.5589950/1‑94 (MQ=60)
TTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCA > SRR4302540.7952138/1‑94 (MQ=60)
CTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCA > SRR4302540.2275758/1‑94 (MQ=60)
CTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCA > SRR4302540.1952692/1‑94 (MQ=60)
CTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCA > SRR4302540.5501709/1‑94 (MQ=60)
GCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAAT < SRR4302540.9248235/94‑1 (MQ=60)
CGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATT > SRR4302540.2593736/1‑94 (MQ=60)
CGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATT < SRR4302540.2911738/94‑1 (MQ=60)
GCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTT < SRR4302540.9125510/94‑1 (MQ=60)
CGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTA > SRR4302540.3080134/1‑94 (MQ=60)
GGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAA > SRR4302540.7248718/1‑94 (MQ=60)
GGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAA > SRR4302540.221009/1‑94 (MQ=60)
GCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCACTTTAAG > SRR4302540.113721/1‑94 (MQ=60)
GCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAG < SRR4302540.5582017/94‑1 (MQ=60)
GCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAG < SRR4302540.1978137/94‑1 (MQ=60)
GCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAG < SRR4302540.5154025/94‑1 (MQ=60)
CGAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGT > SRR4302540.6262975/1‑94 (MQ=60)
GAGCGTTTCGTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGGCGCTTTGCGGCTGTTGCCACCAATTTAAGTA < SRR4302540.1148010/94‑1 (MQ=60)
GAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTA > SRR4302540.1819343/1‑94 (MQ=60)
GAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTA > SRR4302540.4871369/1‑94 (MQ=60)
GAGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTA < SRR4302540.1148008/94‑1 (MQ=60)
GAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTA < SRR4302540.4988740/94‑1 (MQ=60)
GAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTA > SRR4302540.694910/1‑94 (MQ=60)
AGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTAC > SRR4302540.153075/1‑94 (MQ=60)
AGCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTAC < SRR4302540.1017962/94‑1 (MQ=60)
AGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTAC < SRR4302540.2217286/94‑1 (MQ=60)
GCGTGTCTTCAATCAATCCCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG < SRR4302540.7172066/94‑1 (MQ=60)
GCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG < SRR4302540.5426035/94‑1 (MQ=60)
GCGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG > SRR4302540.8499706/1‑94 (MQ=60)
GCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG < SRR4302540.7172067/94‑1 (MQ=60)
GCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG < SRR4302540.9904334/94‑1 (MQ=60)
GCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACG < SRR4302540.124583/94‑1 (MQ=60)
CGTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGG > SRR4302540.1243189/1‑94 (MQ=60)
GTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGG > SRR4302540.7571514/1‑94 (MQ=60)
GTGTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGG > SRR4302540.2628554/1‑94 (MQ=60)
GTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGG > SRR4302540.8458422/1‑94 (MQ=60)
GTGTCTTCAATCAATAACGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGG < SRR4302540.7569325/94‑1 (MQ=60)
TGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGA > SRR4302540.2966753/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC > SRR4302540.823059/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC > SRR4302540.8210702/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAG > SRR4302540.8016958/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC > SRR4302540.27655/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC < SRR4302540.9169151/94‑1 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC > SRR4302540.5700548/1‑94 (MQ=60)
GTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGAC < SRR4302540.295510/94‑1 (MQ=60)
CTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGT > SRR4302540.9792108/1‑94 (MQ=60)
CTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGT > SRR4302540.4289794/1‑94 (MQ=60)
CTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGT > SRR4302540.7197535/1‑94 (MQ=60)
CTTCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGT > SRR4302540.8983938/1‑94 (MQ=60)
TTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTG < SRR4302540.1149045/94‑1 (MQ=60)
TTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTG > SRR4302540.1238759/1‑94 (MQ=60)
TTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTG < SRR4302540.2317081/94‑1 (MQ=60)
TTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTG < SRR4302540.5300787/94‑1 (MQ=60)
TCAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGA > SRR4302540.10111319/1‑94 (MQ=60)
CAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAA < SRR4302540.5103286/94‑1 (MQ=60)
CAATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTAAGGGACGTGAA > SRR4302540.8156254/1‑94 (MQ=60)
AATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAAT < SRR4302540.7917918/94‑1 (MQ=60)
AATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAAT < SRR4302540.7917627/94‑1 (MQ=60)
AATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAAT > SRR4302540.7294224/1‑94 (MQ=60)
AATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAAT < SRR4302540.4730282/94‑1 (MQ=60)
ATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATT > SRR4302540.8733551/1‑94 (MQ=60)
ATCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATT < SRR4302540.2354773/94‑1 (MQ=60)
TCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTA > SRR4302540.2613625/1‑94 (MQ=60)
TCAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTA > SRR4302540.2613626/1‑94 (MQ=60)
CAATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTAT < SRR4302540.8684759/94‑1 (MQ=60)
CAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTAT < SRR4302540.4762282/94‑1 (MQ=60)
AATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATG < SRR4302540.9338413/94‑1 (MQ=60)
AATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATG > SRR4302540.1415728/1‑94 (MQ=60)
AATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATG < SRR4302540.3911042/94‑1 (MQ=60)
AATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATA < SRR4302540.605980/94‑1 (MQ=60)
ATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGG < SRR4302540.4405288/94‑1 (MQ=60)
ATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGG < SRR4302540.4405281/94‑1 (MQ=60)
ATACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGG < SRR4302540.3548714/94‑1 (MQ=60)
ACCGCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCCCCAATTTAAGTACGGGACGTGAATTATGGTT < SRR4302540.477319/94‑1 (MQ=60)
ACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTT > SRR4302540.4764759/1‑94 (MQ=60)
GCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCTTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATTGTTTAC < SRR4302540.6409749/94‑1 (MQ=60)
GCGAAATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTAC < SRR4302540.5115479/94‑1 (MQ=60)
GCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGCGAATTATGGTTTAC > SRR4302540.10079225/1‑94 (MQ=60)
CGAACTAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACT < SRR4302540.3981000/94‑1 (MQ=60)
GAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTG > SRR4302540.8867185/1‑94 (MQ=60)
AAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGA > SRR4302540.2820906/1‑94 (MQ=60)
AATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAA > SRR4302540.745875/1‑94 (MQ=60)
AATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAA < SRR4302540.3187208/94‑1 (MQ=60)
AATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAA < SRR4302540.1033663/94‑1 (MQ=60)
ATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAG > SRR4302540.10062037/1‑94 (MQ=60)
ATAATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAG > SRR4302540.2846514/1‑94 (MQ=60)
ATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAG < SRR4302540.2094285/94‑1 (MQ=60)
TAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGG > SRR4302540.1945645/1‑94 (MQ=60)
TAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGG < SRR4302540.3003981/94‑1 (MQ=60)
ATGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCG < SRR4302540.796134/94‑1 (MQ=60)
ATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCG < SRR4302540.833527/94‑1 (MQ=60)
TGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGA < SRR4302540.1096300/94‑1 (MQ=60)
TGCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGA < SRR4302540.1096299/94‑1 (MQ=60)
GCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGTGAT > SRR4302540.6989194/1‑94 (MQ=60)
GCTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGAT > SRR4302540.5033933/1‑94 (MQ=60)
CTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATC < SRR4302540.9141791/94‑1 (MQ=60)
CTGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATC > SRR4302540.2843614/1‑94 (MQ=60)
TGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGTGATCT > SRR4302540.2179467/1‑94 (MQ=60)
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ATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATCT > NC_000913/1288667‑1288853
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
