Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,310,470	A→G	F149L (TTT→CTT)	yciB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,310,470	0	A	G	100.0%	1065.2 / NA	325	F149L (TTT→CTT)	yciB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (150/175); total (150/175)

Only 100 of 336 total aligned reads displayed.

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA  >  NC_000913/1310377‑1310559

   aTTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGt                                                                                         <  1:7812586/93‑1 (MQ=255)

    tttATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGtt                                                                                        >  1:1230232/1‑93 (MQ=255)

    tttATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGtt                                                                                        >  1:8042764/1‑93 (MQ=255)

     ttATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTg                                                                                       >  1:10027713/1‑93 (MQ=255)

      tATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGa                                                                                      <  2:5421881/93‑1 (MQ=255)

       aTCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAc                                                                                     <  1:4284851/93‑1 (MQ=255)

            ccTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCaaa                                                                                >  2:635051/1‑93 (MQ=255)

                 ggCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTGAGGTTGACCCAAATAttt                                                                           <  2:4241198/93‑1 (MQ=255)

                 ggCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAttt                                                                           <  1:958246/93‑1 (MQ=255)

                 ggCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAttt                                                                           <  1:4474775/93‑1 (MQ=255)

                     tgtgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCg                                                                       >  2:8360151/1‑93 (MQ=255)

                     tgtgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCg                                                                       >  2:7075507/1‑93 (MQ=255)

                     tgtgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCg                                                                       >  2:4527939/1‑93 (MQ=255)

                      gtgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCgg                                                                      <  2:1990525/93‑1 (MQ=255)

                       tgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGc                                                                     <  2:7170684/93‑1 (MQ=255)

                           ggTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGcc                                                                 >  2:4997506/1‑93 (MQ=255)

                              agatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAgc                                                              >  1:5705040/1‑92 (MQ=255)

                               gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa                                                             <  2:5723801/93‑1 (MQ=255)

                               gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa                                                             >  2:5868101/1‑93 (MQ=255)

                               gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa                                                             >  1:8768295/1‑93 (MQ=255)

                               gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa                                                             >  2:7299849/1‑93 (MQ=255)

                               gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTCTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa                                                             <  1:5524848/93‑1 (MQ=255)

                                atatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAt                                                            >  1:4199165/1‑93 (MQ=255)

                                atatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAt                                                            <  1:5499059/93‑1 (MQ=255)

                                 tatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATg                                                           >  2:5221525/1‑93 (MQ=255)

                                  atagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGc                                                          >  2:4872420/1‑93 (MQ=255)

                                   tagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCg                                                         >  1:230325/1‑93 (MQ=255)

                                    agataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGa                                                        <  1:5010530/93‑1 (MQ=255)

                                    agataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGa                                                        <  2:6124125/93‑1 (MQ=255)

                                     gataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAt                                                       >  1:9842752/1‑93 (MQ=255)

                                       taCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGt                                                     <  1:9768921/93‑1 (MQ=255)

                                        aCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTa                                                    >  1:8612486/1‑93 (MQ=255)

                                         ccGCTTAACAATGTTAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAg                                                   >  2:1764709/1‑93 (MQ=255)

                                         ccGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGACTGCGATGTAg                                                   >  2:3419140/1‑93 (MQ=255)

                                         ccGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAg                                                   >  2:9613410/1‑93 (MQ=255)

                                          cGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGa                                                  <  2:9349995/93‑1 (MQ=255)

                                           gCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAt                                                 >  2:3883549/1‑93 (MQ=255)

                                           gCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAt                                                 >  1:7328036/1‑93 (MQ=255)

                                           gCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAt                                                 >  1:4675254/1‑93 (MQ=255)

                                            cTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATg                                                <  2:3329034/93‑1 (MQ=255)

                                             ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt                                               >  1:6831199/1‑93 (MQ=255)

                                             ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt                                               >  2:5048436/1‑93 (MQ=255)

                                             ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt                                               >  2:2518538/1‑93 (MQ=255)

                                             ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCAAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt                                               <  1:3586598/93‑1 (MQ=255)

                                              tAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt                                              >  1:8360608/1‑93 (MQ=255)

                                              tAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt                                              <  2:8297088/93‑1 (MQ=255)

                                              tAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt                                              >  2:9057794/1‑93 (MQ=255)

                                                aCAATGAGAAGATTACGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATTTAGCTGtgtt                                            >  2:5812763/1‑90 (MQ=255)

                                                 cAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGc                                           >  1:2808909/1‑93 (MQ=255)

                                                  aaTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGcc                                          >  2:7199431/1‑93 (MQ=255)

                                                  aaTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGcc                                          >  1:2588133/1‑93 (MQ=255)

                                                   aTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCa                                         >  2:7514574/1‑93 (MQ=255)

                                                   aTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCa                                         <  2:1651916/93‑1 (MQ=255)

                                                   aTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCa                                         >  1:4017826/1‑93 (MQ=255)

                                                      tgAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGAc                                      <  1:5231512/93‑1 (MQ=255)

                                                         aGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGc                                   >  2:9467087/1‑93 (MQ=255)

                                                         aGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGc                                   >  2:4227370/1‑93 (MQ=255)

                                                         aGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGc                                   <  1:7583939/93‑1 (MQ=255)

                                                            ttAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCaaa                                <  1:2113457/93‑1 (MQ=255)

                                                            ttAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCaaa                                <  1:6747010/93‑1 (MQ=255)

                                                             taaggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAg                               <  2:1191150/93‑1 (MQ=255)

                                                              aaggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAgg                              <  2:3188689/93‑1 (MQ=255)

                                                              aaggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAgg                              <  1:340604/93‑1 (MQ=255)

                                                                  taaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaa                          >  2:2690938/1‑93 (MQ=255)

                                                                  taaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaa                          <  1:8511112/93‑1 (MQ=255)

                                                                    aggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAg                        <  1:7271994/93‑1 (MQ=255)

                                                                    aggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAg                        <  2:8943549/93‑1 (MQ=255)

                                                                     gggCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGa                       >  1:7169201/1‑93 (MQ=255)

                                                                     aggCGGTCAGGCCAAAGACTTTAAGGTTGACTCAAATATTTTGCGGCAGCCAGAAGGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGa                       <  1:7101755/92‑1 (MQ=255)

                                                                      ggCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaaaaaa                      >  1:7021156/1‑93 (MQ=255)

                                                                       gCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGaaa                     >  1:624567/1‑93 (MQ=255)

                                                                         ggTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAc                   <  2:2934610/93‑1 (MQ=255)

                                                                          gTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACa                  >  1:1440991/1‑93 (MQ=255)

                                                                          gTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACa                  <  1:6149011/93‑1 (MQ=255)

                                                                          gTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACa                  >  2:6684258/1‑93 (MQ=255)

                                                                          gTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACa                  >  1:1945838/1‑93 (MQ=255)

                                                                          gTCAGGCCAAAGAACTTAAGGTTGACCTAACTATGTTGCGGCAACCACAATGCGATGTAGATGTTTGCCAGACCGTAAGGGATAAAGAAAACa                  <  2:7924579/93‑1 (MQ=255)

                                                                           tCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAg                 <  1:1733419/93‑1 (MQ=255)

                                                                           tCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAg                 >  2:3814478/1‑93 (MQ=255)

                                                                            cAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGc                >  1:1313993/1‑93 (MQ=255)

                                                                             aGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGcc               <  1:9117515/93‑1 (MQ=255)

                                                                              ggCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGccc              <  2:306317/93‑1 (MQ=255)

                                                                               gCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCa             <  1:4405375/93‑1 (MQ=255)

                                                                               gCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCa             <  1:78771/93‑1 (MQ=255)

                                                                                ccAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAg            >  1:2041901/1‑93 (MQ=255)

                                                                                 cAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAgg           <  2:8635174/93‑1 (MQ=255)

                                                                                 cAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAgg           >  2:4256141/1‑93 (MQ=255)

                                                                                 cAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAgg           >  1:933946/1‑93 (MQ=255)

                                                                                  aaaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGc          >  1:8910998/1‑93 (MQ=255)

                                                                                   aaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGcc         <  2:2069041/93‑1 (MQ=255)

                                                                                   aaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGcc         >  2:9830019/1‑93 (MQ=255)

                                                                                    aGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCa        <  1:2399244/93‑1 (MQ=255)

                                                                                    aGACTGTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCa        <  1:3116962/93‑1 (MQ=255)

                                                                                     gACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAg       <  1:1814997/93‑1 (MQ=255)

                                                                                       cTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAt     >  2:3603842/1‑93 (MQ=255)

                                                                                       cTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAt     >  1:4161068/1‑93 (MQ=255)

                                                                                        tttAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAtt    >  2:2227835/1‑93 (MQ=255)

                                                                                          tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa  <  1:6553058/93‑1 (MQ=255)

                                                                                          tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa  >  2:1515258/1‑93 (MQ=255)

                                                                                          tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa  >  2:9936484/1‑93 (MQ=255)

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA  >  NC_000913/1310377‑1310559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  >  NC_000913/1310377‑1310561

tcgatttcattttcttctGCATGTGGCCGTAGATATAGATTCCTCTTAACAATGTGAATATTAAGGTAAGGCCGGTCAGGCCAAAGACTTTAAG                                                                                             <  SRR4302540.7504085/76‑1 (MQ=60)

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAG                                                                                             <  SRR4302540.5861009/94‑1 (MQ=60)

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAG                                                                                             <  SRR4302540.2203208/94‑1 (MQ=60)

AGGAGTGATCTTCCTGCGGCATGTGGCGAT‑GATATAGCTACCGCTTAACAATGTGAAGATTAAGGTCAGGGCGGTCAGGCCAAAGACTTTAAAG                                                                                            <  SRR4302540.5711571/94‑1 (MQ=60)

  GATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGT                                                                                           <  SRR4302540.4155455/94‑1 (MQ=60)

   ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTT                                                                                          >  SRR4302540.1242805/1‑94 (MQ=60)

   ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTT                                                                                          <  SRR4302540.7903886/94‑1 (MQ=60)

   ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTT                                                                                          >  SRR4302540.8136214/1‑94 (MQ=60)

    TTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTG                                                                                         <  SRR4302540.10087965/94‑1 (MQ=60)

    TTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTG                                                                                         >  SRR4302540.10144383/1‑94 (MQ=60)

    TTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTG                                                                                         >  SRR4302540.5573880/1‑94 (MQ=60)

      TATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAC                                                                                       >  SRR4302540.5507308/1‑94 (MQ=60)

      TATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAC                                                                                       <  SRR4302540.5524116/94‑1 (MQ=60)

      TATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGACAAAGACTTTAAGGTTGAC                                                                                       >  SRR4302540.7157292/1‑94 (MQ=60)

       ATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACC                                                                                      <  SRR4302540.4331459/94‑1 (MQ=60)

       ATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACC                                                                                      >  SRR4302540.6817520/1‑94 (MQ=60)

         CTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCA                                                                                    <  SRR4302540.3581831/94‑1 (MQ=60)

         CTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCA                                                                                    >  SRR4302540.4257447/1‑94 (MQ=60)

         CTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCA                                                                                    >  SRR4302540.2091296/1‑94 (MQ=60)

          TTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAA                                                                                   >  SRR4302540.2207221/1‑94 (MQ=60)

          TTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGACAAAGACTTTAAGGTTGACCCAA                                                                                   >  SRR4302540.4090058/1‑94 (MQ=60)

            CCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAAT                                                                                 <  SRR4302540.1131966/94‑1 (MQ=60)

             CTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATA                                                                                <  SRR4302540.4239292/94‑1 (MQ=60)

                CGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTT                                                                             <  SRR4302540.4709895/94‑1 (MQ=60)

                 GGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTT                                                                            <  SRR4302540.8423572/94‑1 (MQ=60)

                 GGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTT                                                                            <  SRR4302540.968171/94‑1 (MQ=60)

                 GGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTT                                                                            <  SRR4302540.4523317/94‑1 (MQ=60)

                 GGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTT                                                                            <  SRR4302540.8423571/94‑1 (MQ=60)

                  GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG                                                                           <  SRR4302540.9559850/94‑1 (MQ=60)

                  GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG                                                                           <  SRR4302540.9378279/94‑1 (MQ=60)

                  GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG                                                                           <  SRR4302540.5922715/94‑1 (MQ=60)

                  GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG                                                                           >  SRR4302540.4465496/1‑94 (MQ=60)

                  GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG                                                                           <  SRR4302540.9941668/94‑1 (MQ=60)

                   CATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGC                                                                          >  SRR4302540.6153554/1‑94 (MQ=60)

                    ATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCG                                                                         >  SRR4302540.74032/1‑94 (MQ=60)

                       TGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCA                                                                      <  SRR4302540.4495764/94‑1 (MQ=60)

                       TGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCA                                                                      >  SRR4302540.3002953/1‑94 (MQ=60)

                         GCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGC                                                                    >  SRR4302540.1755261/1‑94 (MQ=60)

                           GGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCA                                                                  >  SRR4302540.3791171/1‑94 (MQ=60)

                            GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGacaa                                                                 >  SRR4302540.7095119/1‑90 (MQ=60)

                            GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAG                                                                 <  SRR4302540.6341140/94‑1 (MQ=60)

                            GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAG                                                                 >  SRR4302540.7334757/1‑94 (MQ=60)

                             TAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGC                                                                >  SRR4302540.5767853/1‑94 (MQ=60)

                             TAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGA                                                                <  SRR4302540.2140075/94‑1 (MQ=60)

                              AGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAA                                                               <  SRR4302540.922483/94‑1 (MQ=60)

                              AGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAA                                                               <  SRR4302540.8740059/94‑1 (MQ=60)

                              AGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAA                                                               >  SRR4302540.8869925/1‑94 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              <  SRR4302540.706590/94‑1 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              >  SRR4302540.4244852/1‑94 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              >  SRR4302540.7144088/1‑94 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              <  SRR4302540.5585681/94‑1 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              <  SRR4302540.9846552/94‑1 (MQ=60)

                               GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTCTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT                                                              <  SRR4302540.5585685/94‑1 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             >  SRR4302540.27489/1‑94 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             <  SRR4302540.5559608/94‑1 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             <  SRR4302540.3411845/94‑1 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             >  SRR4302540.636745/1‑94 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             <  SRR4302540.8879116/94‑1 (MQ=60)

                                ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG                                                             <  SRR4302540.2045816/94‑1 (MQ=60)

                                 TATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGC                                                            <  SRR4302540.5060982/94‑1 (MQ=60)

                                 TATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGC                                                            <  SRR4302540.5060979/94‑1 (MQ=60)

                                  ATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCG                                                           >  SRR4302540.232553/1‑94 (MQ=60)

                                  ATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCG                                                           >  SRR4302540.1847276/1‑94 (MQ=60)

                                   TAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCTGCAGCCAGAATGCGA                                                          <  SRR4302540.7716517/94‑1 (MQ=60)

                                   TAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGA                                                          <  SRR4302540.6236386/94‑1 (MQ=60)

                                   TAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGA                                                          <  SRR4302540.6236387/94‑1 (MQ=60)

                                    AGATGCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAT                                                         <  SRR4302540.8017582/94‑1 (MQ=60)

                                    AGATACCGCTTAACAATGTGAGGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAT                                                         <  SRR4302540.8617768/94‑1 (MQ=60)

                                    AGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAT                                                         <  SRR4302540.5064786/94‑1 (MQ=60)

                                    AGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAT                                                         >  SRR4302540.9957813/1‑94 (MQ=60)

                                     GATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATG                                                        <  SRR4302540.4437538/94‑1 (MQ=60)

                                      ATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGT                                                       >  SRR4302540.2041462/1‑94 (MQ=60)

                                       TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA                                                      >  SRR4302540.9915886/1‑94 (MQ=60)

                                       TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA                                                      <  SRR4302540.9883469/94‑1 (MQ=60)

                                       TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA                                                      <  SRR4302540.3175761/94‑1 (MQ=60)

                                       TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA                                                      >  SRR4302540.8712557/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   <  SRR4302540.8951502/94‑1 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   >  SRR4302540.18314/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   <  SRR4302540.2814100/94‑1 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   >  SRR4302540.2351850/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   >  SRR4302540.7409853/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   >  SRR4302540.4725280/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   >  SRR4302540.1026431/1‑94 (MQ=60)

                                          CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   <  SRR4302540.9874332/94‑1 (MQ=60)

                                          CGCTGAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT                                                   <  SRR4302540.7235229/94‑1 (MQ=60)

                                            CTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGT                                                 >  SRR4302540.6906839/1‑94 (MQ=60)

                                             TTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTT                                                >  SRR4302540.8457626/1‑94 (MQ=60)

                                             TTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCAAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTT                                                <  SRR4302540.3625769/94‑1 (MQ=60)

                                              TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT                                               <  SRR4302540.8498673/94‑1 (MQ=60)

                                              TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT                                               <  SRR4302540.77673/94‑1 (MQ=60)

                                                ACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGC                                             >  SRR4302540.6018331/1‑94 (MQ=60)

                                                ACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGC                                             >  SRR4302540.2839241/1‑94 (MQ=60)

                                                 CAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCC                                            >  SRR4302540.2616037/1‑94 (MQ=60)

                                                 CAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCC                                            >  SRR4302540.7897445/1‑94 (MQ=60)

                                                  AATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCA                                           >  SRR4302540.3204980/1‑94 (MQ=60)

                                                  AATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCA                                           <  SRR4302540.7195036/94‑1 (MQ=60)

                                                  AATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCA                                           >  SRR4302540.4061106/1‑94 (MQ=60)

                                                   ATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAG                                          >  SRR4302540.8055565/1‑94 (MQ=60)

                                                   ATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAG                                          >  SRR4302540.4356467/1‑94 (MQ=60)

                                                   ATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAG                                          <  SRR4302540.9296106/94‑1 (MQ=60)

                                                   ATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAG                                          >  SRR4302540.130973/1‑94 (MQ=60)

                                                      TGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACC                                       <  SRR4302540.7403315/94‑1 (MQ=60)

                                                      TGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACC                                       <  SRR4302540.5288562/94‑1 (MQ=60)

                                                        AAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGC                                     >  SRR4302540.2485006/1‑94 (MQ=60)

                                                         AGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCA                                    <  SRR4302540.7669084/94‑1 (MQ=60)

                                                         AGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCA                                    >  SRR4302540.4392450/1‑94 (MQ=60)

                                                         AGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCA                                    <  SRR4302540.978119/94‑1 (MQ=60)

                                                          GATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAA                                   <  SRR4302540.4068617/94‑1 (MQ=60)

                                                           ATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAA                                  <  SRR4302540.1564200/94‑1 (MQ=60)

                                                            TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG                                 >  SRR4302540.4699626/1‑94 (MQ=60)

                                                            TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG                                 <  SRR4302540.6821560/94‑1 (MQ=60)

                                                            TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG                                 <  SRR4302540.2136142/94‑1 (MQ=60)

                                                             TAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGG                                <  SRR4302540.7938519/94‑1 (MQ=60)

                                                              AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA                               <  SRR4302540.344049/94‑1 (MQ=60)

                                                              AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA                               <  SRR4302540.6657924/94‑1 (MQ=60)

                                                              AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA                               >  SRR4302540.5732447/1‑94 (MQ=60)

                                                               AGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGAT                              >  SRR4302540.7583695/1‑94 (MQ=60)

                                                                 GTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAA                            <  SRR4302540.9493098/94‑1 (MQ=60)

                                                                  TAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAA                           <  SRR4302540.8610022/94‑1 (MQ=60)

                                                                  TAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAA                           <  SRR4302540.4275154/94‑1 (MQ=60)

                                                                  GAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAA                           <  SRR4302540.8610021/94‑1 (MQ=60)

                                                                   AAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAG                          >  SRR4302540.3652397/1‑94 (MQ=60)

                                                                    AGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGA                         <  SRR4302540.7353139/94‑1 (MQ=60)

                                                                    AGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGA                         >  SRR4302540.7249121/1‑94 (MQ=60)

                                                                    AGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGA                         <  SRR4302540.422785/94‑1 (MQ=60)

                                                                     GGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAA                        <  SRR4302540.921274/94‑1 (MQ=60)

                                                                     GGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAAAA                        >  SRR4302540.7099140/1‑94 (MQ=60)

                                                                     AGGCGGTCAGGCCAAAGACTTTAAGGTTGACTCAAATATTTTGCGGCAGCCAGAAGGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAA                        <  SRR4302540.7180771/94‑1 (MQ=60)

                                                                      GGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAA                       >  SRR4302540.631215/1‑94 (MQ=60)

                                                                      GGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAA                       <  SRR4302540.5077488/94‑1 (MQ=60)

                                                                       GCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAA                      >  SRR4302540.6827725/1‑94 (MQ=60)

                                                                        CGGTCAGGCCAAAGACTTTAAGGTTGCCCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAC                     <  SRR4302540.7177069/94‑1 (MQ=60)

                                                                        CGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAC                     <  SRR4302540.3625183/94‑1 (MQ=60)

                                                                        CGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAC                     <  SRR4302540.2448515/94‑1 (MQ=60)

                                                                         GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA                    >  SRR4302540.1967023/1‑94 (MQ=60)

                                                                         GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA                    >  SRR4302540.1456633/1‑94 (MQ=60)

                                                                         GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA                    <  SRR4302540.8644186/94‑1 (MQ=60)

                                                                         GGTCAGGCCAAAGAATTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA                    <  SRR4302540.9095988/94‑1 (MQ=60)

                                                                          GTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAG                   <  SRR4302540.7352191/94‑1 (MQ=60)

                                                                          GTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAG                   <  SRR4302540.6217498/94‑1 (MQ=60)

                                                                           TCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGC                  >  SRR4302540.1327655/1‑94 (MQ=60)

                                                                           TCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGC                  <  SRR4302540.6631212/94‑1 (MQ=60)

                                                                           TCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGC                  <  SRR4302540.1752127/94‑1 (MQ=60)

                                                                            CAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCC                 <  SRR4302540.1384853/94‑1 (MQ=60)

                                                                            CAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCC                 <  SRR4302540.8772320/94‑1 (MQ=60)

                                                                             AGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCC                <  SRR4302540.9227107/94‑1 (MQ=60)

                                                                             AGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCC                <  SRR4302540.2691876/94‑1 (MQ=60)

                                                                              GGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCA               >  SRR4302540.2861005/1‑94 (MQ=60)

                                                                              GGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCA               >  SRR4302540.8184880/1‑94 (MQ=60)

                                                                               GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG              <  SRR4302540.79597/94‑1 (MQ=60)

                                                                               GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG              <  SRR4302540.79596/94‑1 (MQ=60)

                                                                               GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG              <  SRR4302540.4453139/94‑1 (MQ=60)

                                                                               GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG              >  SRR4302540.2063902/1‑94 (MQ=60)

                                                                               CCCAAAGACTTTAAGGTGCACCCAAATATTCTGCGGCAGCCAGAATGCGATGTAGATGTTTCCCAGACCGCAAAGGATAAAGAAAACAGCCCAG              <  SRR4302540.137146/94‑1 (MQ=60)

                                                                                GCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGG             <  SRR4302540.1695477/94‑1 (MQ=60)

                                                                                CCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGG             >  SRR4302540.5334527/1‑94 (MQ=60)

                                                                                CCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGG             >  SRR4302540.740339/1‑94 (MQ=60)

                                                                                CCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGG             >  SRR4302540.943743/1‑94 (MQ=60)

                                                                                 CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC            >  SRR4302540.9014184/1‑94 (MQ=60)

                                                                                 CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC            >  SRR4302540.5129967/1‑94 (MQ=60)

                                                                                 CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC            >  SRR4302540.1251358/1‑94 (MQ=60)

                                                                                 CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC            >  SRR4302540.8772947/1‑94 (MQ=60)

                                                                                 CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC            >  SRR4302540.2304557/1‑94 (MQ=60)

                                                                                  AAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCC           <  SRR4302540.4959222/94‑1 (MQ=60)

                                                                                   AAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCA          >  SRR4302540.1894937/1‑94 (MQ=60)

                                                                                    AGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAG         <  SRR4302540.2425109/94‑1 (MQ=60)

                                                                                    AGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAG         <  SRR4302540.2425110/94‑1 (MQ=60)

                                                                                    AGACTGTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAG         <  SRR4302540.3151039/94‑1 (MQ=60)

                                                                                     GACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGA        <  SRR4302540.1834813/94‑1 (MQ=60)

                                                                                     GACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGAACGCAAAGGATAAAGAAAACAGCCCAGGCCAGA        <  SRR4302540.1834814/94‑1 (MQ=60)

                                                                                      ACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAT       >  SRR4302540.7530722/1‑94 (MQ=60)

                                                                                      ACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAT       >  SRR4302540.4206168/1‑94 (MQ=60)

                                                                                      ACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGAT       <  SRR4302540.1419440/94‑1 (MQ=60)

                                                                                       CTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATT      >  SRR4302540.2120817/1‑94 (MQ=60)

                                                                                        TTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTC     <  SRR4302540.4179866/94‑1 (MQ=60)

                                                                                         TTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA    <  SRR4302540.6831342/94‑1 (MQ=60)

                                                                                          TAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAG   >  SRR4302540.1946806/1‑94 (MQ=60)

                                                                                          TAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAG   <  SRR4302540.6625734/94‑1 (MQ=60)

                                                                                           AAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  <  SRR4302540.5455754/94‑1 (MQ=60)

                                                                                           AAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  <  SRR4302540.5455755/94‑1 (MQ=60)

                                                                                           AAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  <  SRR4302540.10116365/94‑1 (MQ=60)

                                                                                           AAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  <  SRR4302540.10116364/94‑1 (MQ=60)

AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGC  >  NC_000913/1310377‑1310561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`