Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,310,470 |
A→G |
F149L (TTT→CTT) |
yciB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,310,470 | 0 | A | G | 100.0%
| 649.2
/ NA
| 198 | F149L (TTT→CTT) | yciB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/101); total (97/101) |
Only 100 of 200 total aligned reads displayed.
ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA > NC_000913/1310380‑1310559
|
tttATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGtt > 2:1379006/1‑93 (MQ=255)
tATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGa < 1:2158262/93‑1 (MQ=255)
aTCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAc < 1:5719285/93‑1 (MQ=255)
tCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAcc > 2:4805832/1‑93 (MQ=255)
tCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAcc > 1:1491719/1‑93 (MQ=255)
ttCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCa > 2:5185907/1‑93 (MQ=255)
ttCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCa > 2:4499054/1‑93 (MQ=255)
ccTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCaaa < 2:5168505/93‑1 (MQ=255)
ccTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCaaa < 2:3763699/93‑1 (MQ=255)
ccTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCaaa < 2:216845/93‑1 (MQ=255)
cTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAat < 2:1490061/93‑1 (MQ=255)
gCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAatat < 1:5331411/93‑1 (MQ=255)
ggCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAttt > 1:3824741/1‑93 (MQ=255)
ggCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAttt < 2:5056897/93‑1 (MQ=255)
gCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAtttt < 1:1727461/93‑1 (MQ=255)
gCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATAtttt < 1:4574975/93‑1 (MQ=255)
tgtgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCg > 2:6064468/1‑93 (MQ=255)
tgGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGc < 1:668301/93‑1 (MQ=255)
gcagatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCa > 2:4760650/3‑93 (MQ=255)
gTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCa > 2:12384/1‑93 (MQ=255)
gTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCa > 2:1041824/1‑93 (MQ=255)
gTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCa < 1:4137961/93‑1 (MQ=255)
tagatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAg > 1:1125861/1‑93 (MQ=255)
agatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGa < 1:1776404/93‑1 (MQ=255)
gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa < 1:1477139/93‑1 (MQ=255)
gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa < 1:2908453/93‑1 (MQ=255)
gatatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGaa < 2:1816503/93‑1 (MQ=255)
atatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAt < 2:633043/93‑1 (MQ=255)
tatagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATg > 2:5316097/1‑93 (MQ=255)
atagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGc < 2:1719760/93‑1 (MQ=255)
tagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCg > 1:3535572/1‑93 (MQ=255)
tagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCg < 1:1257003/93‑1 (MQ=255)
tagataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCg > 1:5063659/1‑93 (MQ=255)
agataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGa < 1:6228936/93‑1 (MQ=255)
gataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAt < 2:3064153/93‑1 (MQ=255)
gataCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAt < 2:3484442/93‑1 (MQ=255)
taCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGt > 1:5796776/1‑93 (MQ=255)
aCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTa > 1:1202131/1‑93 (MQ=255)
aCCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTa < 2:3929771/93‑1 (MQ=255)
ccGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAg < 1:5365046/93‑1 (MQ=255)
cGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGa < 2:5267965/93‑1 (MQ=255)
cTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATg < 2:1907838/93‑1 (MQ=255)
ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt < 1:3055335/93‑1 (MQ=255)
ttAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGt > 1:280386/1‑93 (MQ=255)
tAACAATGTGAAGATTAAGGTAAGTGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt < 2:2641722/93‑1 (MQ=255)
tAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt < 1:4942330/93‑1 (MQ=255)
tAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGtt < 1:1745024/93‑1 (MQ=255)
aaCAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGttt > 1:4773991/1‑93 (MQ=255)
aCAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTg < 2:6245383/93‑1 (MQ=255)
cAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGc > 2:438293/1‑93 (MQ=255)
aTGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCa > 2:3278449/1‑93 (MQ=255)
tgtgAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAg > 1:1852669/1‑93 (MQ=255)
gtgAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGa > 1:566719/1‑93 (MQ=255)
gAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGAcc > 1:4888528/1‑93 (MQ=255)
gAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGAcc > 1:3343719/1‑93 (MQ=255)
aGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCACACCGc > 2:323294/1‑93 (MQ=255)
gATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGNNGTAGATGTTTGCCANANCNCa > 1:2866807/1‑93 (MQ=255)
gATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCa < 2:3381594/93‑1 (MQ=255)
ttAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCaaa < 1:1022808/93‑1 (MQ=255)
ttAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCaaa < 1:864738/93‑1 (MQ=255)
ttAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCaaa < 2:2027297/93‑1 (MQ=255)
taaggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAg < 1:4234800/93‑1 (MQ=255)
aggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGa < 2:4667598/93‑1 (MQ=255)
aggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGa < 1:3366022/93‑1 (MQ=255)
ggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGAt < 2:2454712/93‑1 (MQ=255)
ggtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGAt < 1:5259210/93‑1 (MQ=255)
gtaaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATa > 2:3083116/1‑93 (MQ=255)
taaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaa < 1:2304137/93‑1 (MQ=255)
taaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaa < 2:4856323/93‑1 (MQ=255)
taaggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATaa > 1:1591320/1‑93 (MQ=255)
aggGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAg > 2:195609/1‑93 (MQ=255)
gggCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGa > 2:1580253/1‑93 (MQ=255)
ggCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGaa < 1:1221875/93‑1 (MQ=255)
gCGGTCAGGCCAAAGACTTTAAGGTTAACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGaaa < 1:2450118/93‑1 (MQ=255)
cGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGaaaa > 2:5489116/1‑93 (MQ=255)
ggTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAc < 1:1246083/93‑1 (MQ=255)
ggTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAc < 2:3213548/93‑1 (MQ=255)
ggTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAc < 1:2558934/93‑1 (MQ=255)
gTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACa < 2:667219/93‑1 (MQ=255)
tCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAg > 1:3465939/1‑93 (MQ=255)
tCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAg < 1:3697505/93‑1 (MQ=255)
aGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGcc > 1:3631634/1‑93 (MQ=255)
ggCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGccc > 1:5440642/1‑93 (MQ=255)
ccAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAg < 1:6030882/93‑1 (MQ=255)
ccAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAg < 2:5252748/93‑1 (MQ=255)
cAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAgg > 2:876338/1‑93 (MQ=255)
cAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAgg > 2:6016574/1‑93 (MQ=255)
aaaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGc > 2:2015407/1‑93 (MQ=255)
aaaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGc > 2:3865321/1‑93 (MQ=255)
aaaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGc > 1:3865964/1‑93 (MQ=255)
aaaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGc < 2:4245857/93‑1 (MQ=255)
aaGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGcc > 2:3586274/1‑93 (MQ=255)
aGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCa < 1:1319284/93‑1 (MQ=255)
gACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAg > 2:5593720/1‑93 (MQ=255)
gACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAg > 1:4075403/1‑93 (MQ=255)
gACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAg > 2:870817/1‑93 (MQ=255)
tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa > 2:1348930/1‑93 (MQ=255)
tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa > 2:3007658/1‑93 (MQ=255)
tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa < 1:4357799/93‑1 (MQ=255)
tAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCa > 2:4435150/1‑93 (MQ=255)
|
ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA > NC_000913/1310380‑1310559
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGCTT > NC_000913/1310377‑1310563
|
AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAG < SRR4302533.264721/94‑1 (MQ=60)
AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAG < SRR4302533.6004740/94‑1 (MQ=60)
GATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGT < SRR4302533.1793250/94‑1 (MQ=60)
GATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGT < SRR4302533.4844741/94‑1 (MQ=60)
GATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCGTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGT < SRR4302533.549287/94‑1 (MQ=60)
ATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTT < SRR4302533.1315691/94‑1 (MQ=60)
TTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGA > SRR4302533.2241299/1‑94 (MQ=60)
TATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGAC < SRR4302533.2171547/94‑1 (MQ=60)
ATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACC > SRR4302533.1500715/1‑94 (MQ=60)
ATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACC < SRR4302533.5753820/94‑1 (MQ=60)
TCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAA < SRR4302533.1469726/94‑1 (MQ=60)
CTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATA > SRR4302533.3373049/1‑94 (MQ=60)
GCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATT < SRR4302533.5363366/94‑1 (MQ=60)
GCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATT < SRR4302533.2888398/94‑1 (MQ=60)
CGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTT < SRR4302533.6217737/94‑1 (MQ=60)
CGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTT > SRR4302533.3848124/1‑94 (MQ=60)
CGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTT > SRR4302533.5343977/1‑94 (MQ=60)
GGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTT > SRR4302533.5108653/1‑94 (MQ=60)
GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG < SRR4302533.4602700/94‑1 (MQ=60)
GCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTG < SRR4302533.1737943/94‑1 (MQ=60)
GTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGC < SRR4302533.1236974/94‑1 (MQ=60)
TGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCA < SRR4302533.672251/94‑1 (MQ=60)
GGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAG > SRR4302533.2466194/1‑94 (MQ=60)
GGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCA > SRR4302533.1087134/1‑94 (MQ=60)
GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAG < SRR4302533.2587826/94‑1 (MQ=60)
GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAG < SRR4302533.4163065/94‑1 (MQ=60)
GTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAG > SRR4302533.1132547/1‑94 (MQ=60)
TAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGA > SRR4302533.299743/1‑94 (MQ=60)
AGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAA < SRR4302533.1787218/94‑1 (MQ=60)
GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT < SRR4302533.2926308/94‑1 (MQ=60)
GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT < SRR4302533.1486066/94‑1 (MQ=60)
GATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAAT < SRR4302533.3891720/94‑1 (MQ=60)
ATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATG > SRR4302533.5443665/1‑94 (MQ=60)
ATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCG > SRR4302533.1757476/1‑94 (MQ=60)
ATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCG > SRR4302533.5094251/1‑94 (MQ=60)
ATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCG > SRR4302533.3557363/1‑94 (MQ=60)
TAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGA < SRR4302533.1264517/94‑1 (MQ=60)
AGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGAT < SRR4302533.6266247/94‑1 (MQ=60)
ATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGT > SRR4302533.5831798/1‑94 (MQ=60)
TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA > SRR4302533.1209354/1‑94 (MQ=60)
TACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTA > SRR4302533.2091057/1‑94 (MQ=60)
CCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGA < SRR4302533.5397275/94‑1 (MQ=60)
CGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGAT < SRR4302533.3515928/94‑1 (MQ=60)
GCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATG < SRR4302533.3754882/94‑1 (MQ=60)
CTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGT > SRR4302533.282097/1‑94 (MQ=60)
TTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTT < SRR4302533.3074068/94‑1 (MQ=60)
TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT < SRR4302533.5522801/94‑1 (MQ=60)
TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT < SRR4302533.1755636/94‑1 (MQ=60)
TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT < SRR4302533.4972247/94‑1 (MQ=60)
TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT > SRR4302533.4802918/1‑94 (MQ=60)
TAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCAAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTT < SRR4302533.1755635/94‑1 (MQ=60)
AACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTG < SRR4302533.4131752/94‑1 (MQ=60)
AACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTG < SRR4302533.1213551/94‑1 (MQ=60)
ATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAG > SRR4302533.1863965/1‑94 (MQ=60)
TGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGA > SRR4302533.570074/1‑94 (MQ=60)
GTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGAC > SRR4302533.5365793/1‑94 (MQ=60)
TGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACC > SRR4302533.3364381/1‑94 (MQ=60)
TGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACC > SRR4302533.4918146/1‑94 (MQ=60)
AGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGNNGTAGATGTTTGCCANANCNCA > SRR4302533.2884444/1‑94 (MQ=60)
GATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAA < SRR4302533.1495532/94‑1 (MQ=60)
TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG < SRR4302533.869803/94‑1 (MQ=60)
TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG < SRR4302533.2833943/94‑1 (MQ=60)
TTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAG < SRR4302533.1028820/94‑1 (MQ=60)
TAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGG < SRR4302533.4260388/94‑1 (MQ=60)
TAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGG < SRR4302533.5982094/94‑1 (MQ=60)
AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAATGA > SRR4302533.4191945/1‑94 (MQ=60)
AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA > SRR4302533.3475708/1‑94 (MQ=60)
AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA > SRR4302533.1549632/1‑94 (MQ=60)
AAGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGA > SRR4302533.1849239/1‑94 (MQ=60)
AGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGAT > SRR4302533.5784172/1‑94 (MQ=60)
AGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGAT < SRR4302533.3386813/94‑1 (MQ=60)
AGGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCAAGACCGCAAAGGAA > SRR4302533.3658039/1‑94 (MQ=60)
GGTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATA < SRR4302533.5290787/94‑1 (MQ=60)
GTAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAA > SRR4302533.1600946/1‑94 (MQ=60)
TAAGGGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAA < SRR4302533.2318408/94‑1 (MQ=60)
GGCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAA < SRR4302533.1229203/94‑1 (MQ=60)
GCGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAA > SRR4302533.4068568/1‑94 (MQ=60)
GCGGTCAGGCCAAAGACTTTAAGGTTAACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAA < SRR4302533.2465238/94‑1 (MQ=60)
CGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAC < SRR4302533.1254178/94‑1 (MQ=60)
CGGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAAC > SRR4302533.4565428/1‑94 (MQ=60)
GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA < SRR4302533.1253523/94‑1 (MQ=60)
GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA < SRR4302533.6317546/94‑1 (MQ=60)
GGTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACA < SRR4302533.2574668/94‑1 (MQ=60)
GTCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAG > SRR4302533.3487331/1‑94 (MQ=60)
TCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGC < SRR4302533.3720217/94‑1 (MQ=60)
TCAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGC < SRR4302533.2424276/94‑1 (MQ=60)
CAGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCC > SRR4302533.3653977/1‑94 (MQ=60)
AGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCC < SRR4302533.4989900/94‑1 (MQ=60)
AGGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCC > SRR4302533.5473407/1‑94 (MQ=60)
GGCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCA < SRR4302533.4873427/94‑1 (MQ=60)
GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG < SRR4302533.3645598/94‑1 (MQ=60)
GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG > SRR4302533.4377416/1‑94 (MQ=60)
GCCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAG < SRR4302533.573877/94‑1 (MQ=60)
CCAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGG < SRR4302533.6067431/94‑1 (MQ=60)
CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC > SRR4302533.3170872/1‑94 (MQ=60)
CAAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGC > SRR4302533.3889566/1‑94 (MQ=60)
AAAGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCC > SRR4302533.4925614/1‑94 (MQ=60)
AGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAG < SRR4302533.1327201/94‑1 (MQ=60)
AGACTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAG > SRR4302533.4100212/1‑94 (MQ=60)
CTTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATT > SRR4302533.734960/1‑94 (MQ=60)
TTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTC > SRR4302533.16079/1‑94 (MQ=60)
TTTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTC > SRR4302533.1138630/1‑94 (MQ=60)
TTAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCA < SRR4302533.4778035/94‑1 (MQ=60)
TAAGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAG < SRR4302533.4384103/94‑1 (MQ=60)
AGGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGCTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGCT > SRR4302533.2806554/1‑94 (MQ=60)
GGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGCTT < SRR4302533.144202/94‑1 (MQ=60)
GGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGCTG > SRR4302533.6084108/1‑94 (MQ=60)
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AGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTTAACAATGTGAAGATTAAGGTAAGGGCGGTCAGGCCAAAGACTTTAAAGTTGACCCAAATATTTTGCGGCAGCCAGAATGCGATGTAGATGTTTGCCAGACCGCAAAGGATAAAGAAAACAGCCCAGGCCAGATTCAGCTT > NC_000913/1310377‑1310563
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
