Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,338,553	A→G	H96R (CAC→CGC)	yciS →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,338,553	0	A	G	100.0%	986.8 / NA	307	H96R (CAC→CGC)	yciS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (150/157); total (150/157)

Only 100 of 317 total aligned reads displayed.

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCt                                                                                         >  1:8624355/1‑93 (MQ=255)

gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCt                                                                                         <  1:6807714/93‑1 (MQ=255)

 aGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTc                                                                                        >  2:7177200/1‑93 (MQ=255)

 aGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTc                                                                                        >  1:9933059/1‑93 (MQ=255)

   ttCGTGTTTCCCTGGCGCTCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      >  1:2255634/1‑93 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      <  1:7909958/93‑1 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      >  1:887244/1‑93 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      <  2:3735644/93‑1 (MQ=255)

    tCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTc                                                                                     <  2:362125/93‑1 (MQ=255)

      gtgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAg                                                                                   >  2:2577438/1‑93 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  >  2:7461220/1‑93 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  >  1:8149711/1‑93 (MQ=255)

        gtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcg                                                                                 <  2:2494660/93‑1 (MQ=255)

             ccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGaa                                                                            <  1:3871724/93‑1 (MQ=255)

              cTGGCGCGCGCTGAACGTAAAATAACGCGACTGGAAAACCAGCTTTCCCCCGCGACTGACGTGGCTGTATTGCCGCGCTCGTCAGCGGCGacg                                                                           >  2:7733382/1‑91 (MQ=255)

                ggCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGa                                                                         <  2:4470145/93‑1 (MQ=255)

                 gcgcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGaa                                                                        >  1:1908365/1‑93 (MQ=255)

                   gcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATa                                                                      <  1:292175/93‑1 (MQ=255)

                   gcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATa                                                                      <  2:92650/93‑1 (MQ=255)

                      cgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACt                                                                   >  1:3800805/1‑93 (MQ=255)

                      cgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACt                                                                   >  1:6923267/1‑93 (MQ=255)

                       gcTGAACGTAAAATAAAGCGACTGGAAACCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  <  1:5098936/93‑1 (MQ=255)

                       gcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  >  2:3795650/1‑93 (MQ=255)

                       gcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  >  1:6478636/1‑93 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                <  1:3772865/93‑1 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                >  1:9361857/1‑93 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                <  2:8470397/93‑1 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                >  2:6220438/1‑93 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               >  1:5916464/1‑93 (MQ=255)

                           aaCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  2:2339545/93‑1 (MQ=255)

                           aaCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  1:4592567/93‑1 (MQ=255)

                           aaCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  2:7982122/93‑1 (MQ=255)

                           aaCCTAAAAAAAAGCCACCGGAAAACCCAGTTTCCCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  2:4039084/93‑1 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             <  1:9586378/93‑1 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             >  1:2404939/1‑93 (MQ=255)

                             cGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATg                                                            >  2:8598397/1‑93 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           >  2:6570699/1‑93 (MQ=255)

                               tAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCt                                                          >  1:9484690/1‑93 (MQ=255)

                               tAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCt                                                          >  2:1489116/1‑93 (MQ=255)

                                 aaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                                                        >  2:6390314/1‑93 (MQ=255)

                                  aaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                                                       >  2:9067025/1‑93 (MQ=255)

                                   aTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAg                                                      >  2:8788577/1‑93 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     >  1:3580803/1‑93 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     >  2:8244585/1‑93 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     <  2:4347910/93‑1 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    >  2:678067/1‑93 (MQ=255)

                                       aGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgt                                                  <  2:5932099/93‑1 (MQ=255)

                                        gCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt                                                 <  2:5107518/93‑1 (MQ=255)

                                        gCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt                                                 >  1:7032283/1‑93 (MQ=255)

                                          gACTGGAAAACCAGCTTTCCCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               <  1:6747458/93‑1 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               <  1:1623098/93‑1 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               <  2:9767290/93‑1 (MQ=255)

                                           aCTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgtt                                              <  2:6942154/93‑1 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  2:5673290/93‑1 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  2:1733141/93‑1 (MQ=255)

                                              tgAAATCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCt                                           <  1:6583830/92‑1 (MQ=255)

                                              ggAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCt                                           <  1:1197138/93‑1 (MQ=255)

                                               gAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTg                                          >  1:9629528/1‑93 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      <  1:7439471/93‑1 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      <  2:5789931/93‑1 (MQ=255)

                                                    ccAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt                                     <  1:2021471/93‑1 (MQ=255)

                                                    ccAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt                                     >  1:7262867/1‑93 (MQ=255)

                                                     cAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTg                                    <  2:8721783/93‑1 (MQ=255)

                                                       gCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGcc                                  >  1:8313817/1‑93 (MQ=255)

                                                        cTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCt                                 >  2:9578984/1‑93 (MQ=255)

                                                        cTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCt                                 <  2:4934559/93‑1 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTg                                >  1:3387089/1‑93 (MQ=255)

                                                          ttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGt                               <  2:342680/93‑1 (MQ=255)

                                                             ccccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGc                            <  2:4558792/92‑1 (MQ=255)

                                                             aCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGc                            <  1:5025898/93‑1 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGGATAACTTTCTATGCTGGTGATGTTGTTTCTGCTTTTGCCTATAACCg                          >  2:8890567/1‑93 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          <  1:4208215/93‑1 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          >  2:7680361/1‑93 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          >  2:2849968/1‑93 (MQ=255)

                                                                 gcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCt                        >  1:5298950/1‑93 (MQ=255)

                                                                 gcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCt                        >  1:6046562/1‑93 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:6085737/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:1976778/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:8068710/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:3383675/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:2737316/93‑1 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTag                  >  2:2107513/1‑92 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAt                  <  1:7672026/93‑1 (MQ=255)

                                                                        aCGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATg                 <  2:1596653/93‑1 (MQ=255)

                                                                        aCGTGGCTGTAGTGCCGCGCTCGCCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATg                 <  2:5520304/93‑1 (MQ=255)

                                                                          gTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGc               <  2:1424451/93‑1 (MQ=255)

                                                                          gTGGCTGTAGTGCCGCGCTCCGCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGc               <  2:7262121/93‑1 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              >  1:4903651/1‑93 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              >  1:8584171/1‑93 (MQ=255)

                                                                              cTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCATGTAGCCGCTGCCTATGGCTGGt           <  1:1716170/93‑1 (MQ=255)

                                                                               tGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGta          >  2:7923013/1‑93 (MQ=255)

                                                                                gTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtat         >  2:7253004/1‑93 (MQ=255)

                                                                                gTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtat         <  1:3235999/93‑1 (MQ=255)

                                                                                 tAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtata        <  2:1004725/93‑1 (MQ=255)

                                                                                 tAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtata        <  2:682913/93‑1 (MQ=255)

                                                                                  aGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGTTTTTGCCTGTAGCCGCTGCCTATGGCTGGTatat       <  1:110089/93‑1 (MQ=255)

                                                                                   gTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATg      <  1:8357258/93‑1 (MQ=255)

                                                                                    tGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     >  1:3090010/1‑93 (MQ=255)

                                                                                    tGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     >  1:3701732/1‑93 (MQ=255)

                                                                                    tGCCGCGCGCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     <  1:2566683/93‑1 (MQ=255)

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAG  >  NC_000913/1338460‑1338646

TGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCG                                                                                               >  SRR4302540.4806427/1‑94 (MQ=60)

TGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCG                                                                                               >  SRR4302540.4806428/1‑94 (MQ=60)

TGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCG                                                                                               >  SRR4302540.643500/1‑94 (MQ=60)

  CGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCT                                                                                             >  SRR4302540.3074095/1‑94 (MQ=60)

  CGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCT                                                                                             >  SRR4302540.8724537/1‑94 (MQ=60)

   GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTC                                                                                            >  SRR4302540.10048982/1‑94 (MQ=60)

   GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTC                                                                                            <  SRR4302540.8847959/94‑1 (MQ=60)

   GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTC                                                                                            <  SRR4302540.1969400/94‑1 (MQ=60)

   GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTC                                                                                            <  SRR4302540.6883046/94‑1 (MQ=60)

   GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTC                                                                                            <  SRR4302540.6939338/94‑1 (MQ=60)

     GTTCGTGTTTCCCTGGCGCTCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGT                                                                                          >  SRR4302540.2279842/1‑94 (MQ=60)

     GTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGT                                                                                          <  SRR4302540.831619/94‑1 (MQ=60)

     GTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGT                                                                                          >  SRR4302540.896663/1‑94 (MQ=60)

      TTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTC                                                                                         <  SRR4302540.8002192/94‑1 (MQ=60)

       TCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCA                                                                                        >  SRR4302540.7975698/1‑94 (MQ=60)

        CGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAG                                                                                       <  SRR4302540.6882728/94‑1 (MQ=60)

        CGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAG                                                                                       <  SRR4302540.6130588/94‑1 (MQ=60)

        CGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAG                                                                                       >  SRR4302540.3302744/1‑94 (MQ=60)

         GTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCCACCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGC                                                                                      >  SRR4302540.425981/1‑94 (MQ=60)

         GTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGC                                                                                      >  SRR4302540.8244323/1‑94 (MQ=60)

           GTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGG                                                                                    >  SRR4302540.3878841/1‑94 (MQ=60)

           GTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGG                                                                                    >  SRR4302540.3500067/1‑94 (MQ=60)

            TTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGC                                                                                   <  SRR4302540.8486551/94‑1 (MQ=60)

            TTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGC                                                                                   <  SRR4302540.3613513/94‑1 (MQ=60)

            TTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGC                                                                                   >  SRR4302540.5174067/1‑94 (MQ=60)

            TTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGC                                                                                   <  SRR4302540.2068926/94‑1 (MQ=60)

              TCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGA                                                                                 <  SRR4302540.2480171/94‑1 (MQ=60)

                CCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAG                                                                               <  SRR4302540.3913814/94‑1 (MQ=60)

                 CTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGG                                                                              <  SRR4302540.689091/94‑1 (MQ=60)

                  TGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGA                                                                             <  SRR4302540.3768066/94‑1 (MQ=60)

                  TGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGA                                                                             <  SRR4302540.1871873/94‑1 (MQ=60)

                  CGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGA                                                                             <  SRR4302540.6532781/94‑1 (MQ=60)

                   GGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAA                                                                            >  SRR4302540.1929216/1‑94 (MQ=60)

                    GCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAAT                                                                           <  SRR4302540.8706887/94‑1 (MQ=60)

                     CGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATA                                                                          <  SRR4302540.4202753/94‑1 (MQ=60)

                      GCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAA                                                                         <  SRR4302540.8427225/94‑1 (MQ=60)

                      GCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAA                                                                         <  SRR4302540.295063/94‑1 (MQ=60)

                       CGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAAC                                                                        >  SRR4302540.3226706/1‑94 (MQ=60)

                       CGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAAC                                                                        <  SRR4302540.2228716/94‑1 (MQ=60)

                        GCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACT                                                                       >  SRR4302540.3842216/1‑94 (MQ=60)

                        GCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACT                                                                       <  SRR4302540.9667803/94‑1 (MQ=60)

                        GCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACT                                                                       >  SRR4302540.7000313/1‑94 (MQ=60)

                         CGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTT                                                                      >  SRR4302540.6550708/1‑94 (MQ=60)

                          GCTGAACGTAAAATAAAGCGACTGGAAACCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTT                                                                     <  SRR4302540.5154116/94‑1 (MQ=60)

                          GCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTT                                                                     <  SRR4302540.5154114/94‑1 (MQ=60)

                          GCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTT                                                                     >  SRR4302540.10091772/1‑94 (MQ=60)

                          GCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTT                                                                     >  SRR4302540.9582985/1‑94 (MQ=60)

                           CTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTC                                                                    <  SRR4302540.1128044/94‑1 (MQ=60)

                           CTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTC                                                                    >  SRR4302540.8718440/1‑94 (MQ=60)

                           CTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTC                                                                    >  SRR4302540.9473341/1‑94 (MQ=60)

                           CTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTC                                                                    >  SRR4302540.1160819/1‑94 (MQ=60)

                           CTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGAGCTCGTTAGCGGCGAAGGCATAACTTTC                                                                    >  SRR4302540.9391127/1‑94 (MQ=60)

                            TGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCT                                                                   >  SRR4302540.5981821/1‑94 (MQ=60)

                            TGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCT                                                                   <  SRR4302540.3814030/94‑1 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 >  SRR4302540.3838480/1‑94 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 >  SRR4302540.8447547/1‑94 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 <  SRR4302540.5007881/94‑1 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 <  SRR4302540.534997/94‑1 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 >  SRR4302540.2430875/1‑94 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 <  SRR4302540.4114940/94‑1 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAT                                                                 <  SRR4302540.4641987/94‑1 (MQ=60)

                              AACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGACTGTAGTGACGCGCTCGTCAGCGGCGAAGGAATAACTTTatag                                                                 >  SRR4302540.3838479/1‑90 (MQ=60)

                               ACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATG                                                                <  SRR4302540.9699549/94‑1 (MQ=60)

                                CGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGC                                                               >  SRR4302540.82213/1‑94 (MQ=60)

                                 GTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCT                                                              >  SRR4302540.5475017/1‑94 (MQ=60)

                                 GTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCT                                                              <  SRR4302540.8595380/94‑1 (MQ=60)

                                 GTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCT                                                              >  SRR4302540.9597147/1‑94 (MQ=60)

                                     AATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAG                                                          <  SRR4302540.94875/94‑1 (MQ=60)

                                      ATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGT                                                         >  SRR4302540.3619910/1‑94 (MQ=60)

                                       TAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTT                                                        <  SRR4302540.3140705/94‑1 (MQ=60)

                                        AAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTG                                                       <  SRR4302540.7037843/94‑1 (MQ=60)

                                         AAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGT                                                      <  SRR4302540.5970647/94‑1 (MQ=60)

                                          AGCGACTGGAAACCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTT                                                     <  SRR4302540.297914/94‑1 (MQ=60)

                                          AGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGCGTTGTT                                                     >  SRR4302540.8270504/1‑94 (MQ=60)

                                          AGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTT                                                     >  SRR4302540.7110435/1‑94 (MQ=60)

                                           GCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTG                                                    <  SRR4302540.6809492/94‑1 (MQ=60)

                                            CGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGT                                                   <  SRR4302540.3364331/94‑1 (MQ=60)

                                             GACTGGAAAACCAGCTTTCCCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTT                                                  <  SRR4302540.6822014/94‑1 (MQ=60)

                                             GACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTT                                                  <  SRR4302540.1640883/94‑1 (MQ=60)

                                             GACTGGAAAACCAGCTTTCACCCGCGACTGACGAGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAGGCTGGAGTTGTTGTT                                                  >  SRR4302540.9056347/1‑94 (MQ=60)

                                              ACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTT                                                 >  SRR4302540.1556914/1‑94 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                <  SRR4302540.9831185/94‑1 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                <  SRR4302540.7968486/94‑1 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                <  SRR4302540.10029166/94‑1 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                >  SRR4302540.5131096/1‑94 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                >  SRR4302540.466803/1‑94 (MQ=60)

                                               CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTC                                                >  SRR4302540.4078120/1‑94 (MQ=60)

                                                TGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCT                                               <  SRR4302540.9723577/94‑1 (MQ=60)

                                                 TGAAATCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              <  SRR4302540.6656758/94‑1 (MQ=60)

                                                 GGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              <  SRR4302540.1209453/94‑1 (MQ=60)

                                                 GGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              >  SRR4302540.9742999/1‑94 (MQ=60)

                                                 GGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              <  SRR4302540.6056421/94‑1 (MQ=60)

                                                 GGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              >  SRR4302540.2871876/1‑94 (MQ=60)

                                                 GGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTG                                              >  SRR4302540.9340576/1‑94 (MQ=60)

                                                    AAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTT                                           >  SRR4302540.2861926/1‑94 (MQ=60)

                                                    AAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTT                                           <  SRR4302540.7331137/94‑1 (MQ=60)

                                                     AACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTT                                          <  SRR4302540.3735849/94‑1 (MQ=60)

                                                      ACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTT                                         >  SRR4302540.7343909/1‑94 (MQ=60)

                                                      ACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTT                                         >  SRR4302540.7626272/1‑94 (MQ=60)

                                                      ACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTT                                         <  SRR4302540.7522367/94‑1 (MQ=60)

                                                      ACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTT                                         <  SRR4302540.5424186/94‑1 (MQ=60)

                                                       CCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTG                                        <  SRR4302540.2043326/94‑1 (MQ=60)

                                                        CAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGC                                       <  SRR4302540.3385123/94‑1 (MQ=60)

                                                         AGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCC                                      >  SRR4302540.8410327/1‑94 (MQ=60)

                                                         AGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCC                                      >  SRR4302540.7661204/1‑94 (MQ=60)

                                                          GCTTTCACCCGCGACTGACGTGGCTGTCGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCT                                     >  SRR4302540.6579798/1‑94 (MQ=60)

                                                          GCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCT                                     >  SRR4302540.6579797/1‑94 (MQ=60)

                                                           CTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTG                                    >  SRR4302540.3424047/1‑94 (MQ=60)

                                                            TTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATTCTGGAGTTGTTGTTTCTGCTTTTGCCTGT                                   >  SRR4302540.3757369/1‑94 (MQ=60)

                                                                ACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCC                               <  SRR4302540.5080297/94‑1 (MQ=60)

                                                                 CCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCG                              <  SRR4302540.7467580/94‑1 (MQ=60)

                                                                  CCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGC                             <  SRR4302540.4254027/94‑1 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            <  SRR4302540.3874052/94‑1 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            <  SRR4302540.1374861/94‑1 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            >  SRR4302540.5356919/1‑94 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            <  SRR4302540.7360660/94‑1 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            >  SRR4302540.6113737/1‑94 (MQ=60)

                                                                   CGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCT                            <  SRR4302540.6833345/94‑1 (MQ=60)

                                                                      GACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCC                         >  SRR4302540.6991119/1‑94 (MQ=60)

                                                                       ACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCT                        <  SRR4302540.2416136/94‑1 (MQ=60)

                                                                       ACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCT                        <  SRR4302540.166355/94‑1 (MQ=60)

                                                                         TGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAT                      >  SRR4302540.234842/1‑94 (MQ=60)

                                                                         TGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAT                      >  SRR4302540.2014080/1‑94 (MQ=60)

                                                                          GACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATG                     <  SRR4302540.8947633/94‑1 (MQ=60)

                                                                          GACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATG                     <  SRR4302540.7758601/94‑1 (MQ=60)

                                                                           ACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGG                    <  SRR4302540.9710016/94‑1 (MQ=60)

                                                                           ACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGG                    >  SRR4302540.3720572/1‑94 (MQ=60)

                                                                            CGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGC                   >  SRR4302540.2478906/1‑94 (MQ=60)

                                                                             GTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCT                  >  SRR4302540.9695838/1‑94 (MQ=60)

                                                                             GTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCT                  >  SRR4302540.4956414/1‑94 (MQ=60)

                                                                             GTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCT                  >  SRR4302540.8683967/1‑94 (MQ=60)

                                                                              TGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTG                 >  SRR4302540.8094885/1‑94 (MQ=60)

                                                                                GCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGT               >  SRR4302540.8203518/1‑94 (MQ=60)

                                                                                 CTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGGA              >  SRR4302540.7127450/1‑94 (MQ=60)

                                                                                 CTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCATGTAGCCGCTGCCTATGGCTGGTA              <  SRR4302540.1734700/94‑1 (MQ=60)

                                                                                  TGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTAT             >  SRR4302540.1731813/1‑94 (MQ=60)

                                                                                   GTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATA            <  SRR4302540.3271193/94‑1 (MQ=60)

                                                                                   GTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATA            <  SRR4302540.6719362/94‑1 (MQ=60)

                                                                                     AGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGTTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATG          <  SRR4302540.111263/94‑1 (MQ=60)

                                                                                     AGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATG          <  SRR4302540.5027419/94‑1 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         >  SRR4302540.3742143/1‑94 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         <  SRR4302540.8454243/94‑1 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         >  SRR4302540.6013965/1‑94 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         >  SRR4302540.3123910/1‑94 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         >  SRR4302540.2252254/1‑94 (MQ=60)

                                                                                      GTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGG         >  SRR4302540.1791284/1‑94 (MQ=60)

                                                                                       TGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGG        >  SRR4302540.4772395/1‑94 (MQ=60)

                                                                                       TGCCGCGCGCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGG        <  SRR4302540.2594355/94‑1 (MQ=60)

                                                                                        GCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGGATATGGGC       >  SRR4302540.462301/1‑94 (MQ=60)

                                                                                         CCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC      <  SRR4302540.7050309/94‑1 (MQ=60)

                                                                                          CGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCG     >  SRR4302540.2186419/1‑94 (MQ=60)

                                                                                           GCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGC    >  SRR4302540.9579314/1‑94 (MQ=60)

                                                                                            CGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCA   >  SRR4302540.9004808/1‑94 (MQ=60)

                                                                                            CGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCA   >  SRR4302540.1575483/1‑94 (MQ=60)

                                                                                            CGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCA   >  SRR4302540.8553358/1‑94 (MQ=60)

                                                                                            CGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCA   <  SRR4302540.7461229/94‑1 (MQ=60)

                                                                                             GCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAG  >  SRR4302540.5079620/1‑94 (MQ=60)

TGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAG  >  NC_000913/1338460‑1338646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`