Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,343,823	C→T	G315E (GGG→GAG)	yciR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,343,823	0	C	T	99.7%	1116.6 / NA	306	G315E (GGG→GAG)	yciR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (164/141); minor base A (0/1); total (164/142)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 313 total aligned reads displayed.

AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC  >  NC_000913/1343733‑1343912

aaGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCa                                                                                         <  2:8238065/93‑1 (MQ=255)

aaGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCa                                                                                         <  2:4593030/93‑1 (MQ=255)

 aGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAc                                                                                        >  1:6466359/1‑93 (MQ=255)

 aGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAc                                                                                        >  1:2859884/1‑93 (MQ=255)

  ggggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAcc                                                                                       <  2:1639918/93‑1 (MQ=255)

  ggggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAcc                                                                                       >  1:5555140/1‑93 (MQ=255)

   gggAGCCGGAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCt                                                                                      <  1:8672481/93‑1 (MQ=255)

    ggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTg                                                                                     >  2:5902738/1‑93 (MQ=255)

    ggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTg                                                                                     <  2:5072473/93‑1 (MQ=255)

       gCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAc                                                                                  <  1:6037858/93‑1 (MQ=255)

        ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcg                                                                                 <  1:9948091/93‑1 (MQ=255)

        ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcg                                                                                 <  2:2496028/93‑1 (MQ=255)

         cGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcgc                                                                                >  1:8938309/1‑93 (MQ=255)

         cGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcgc                                                                                >  2:944669/1‑93 (MQ=255)

           tAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACgcgc                                                                              >  2:7777338/1‑93 (MQ=255)

            aaGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGcc                                                                             >  1:4770014/1‑93 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           >  1:7316993/1‑93 (MQ=255)

               cGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAac                                                                          >  1:1526441/1‑93 (MQ=255)

                gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca                                                                         <  1:8845152/93‑1 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       >  1:7458949/1‑93 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       <  1:9418371/93‑1 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       >  1:6634903/1‑93 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       >  2:6778301/1‑93 (MQ=255)

                   tCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCGCCTGGACGCGCCAACACCt                                                                      >  2:9037847/1‑93 (MQ=255)

                   tCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCt                                                                      >  2:3739707/1‑93 (MQ=255)

                     aaaaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTgg                                                                    >  2:5363446/1‑93 (MQ=255)

                      aaaTTCGTGATGCCATTGCTTCCTGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGt                                                                   <  2:6908290/93‑1 (MQ=255)

                      aaaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACATGGt                                                                   >  1:3418558/1‑93 (MQ=255)

                       aaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTc                                                                  <  1:3443534/93‑1 (MQ=255)

                         ttCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCAt                                                                <  1:7203405/93‑1 (MQ=255)

                           cGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGt                                                              <  2:425492/93‑1 (MQ=255)

                            gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt                                                             >  1:1284118/1‑93 (MQ=255)

                            gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt                                                             <  1:3730896/93‑1 (MQ=255)

                               aTGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCga                                                          >  1:2125732/1‑93 (MQ=255)

                                tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag                                                         >  1:6802506/1‑93 (MQ=255)

                                 gCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgaga                                                        >  2:3904835/1‑93 (MQ=255)

                                    aTTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAg                                                     <  1:2341637/93‑1 (MQ=255)

                                    aTTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAg                                                     >  1:3679089/1‑93 (MQ=255)

                                     ttGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGc                                                    >  1:91537/1‑93 (MQ=255)

                                      tGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCt                                                   >  2:2733586/1‑93 (MQ=255)

                                      tGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCt                                                   >  2:8337149/1‑93 (MQ=255)

                                      tGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCt                                                   <  1:2555223/93‑1 (MQ=255)

                                         ttCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaa                                                <  2:4050935/93‑1 (MQ=255)

                                         ttCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaa                                                >  1:8796394/1‑93 (MQ=255)

                                          tCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTCaaa                                               <  2:9837543/93‑1 (MQ=255)

                                           ccAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaaaa                                              <  1:6605453/93‑1 (MQ=255)

                                            cAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAt                                             >  2:2835331/1‑93 (MQ=255)

                                             aGCGCGTTTTGTGGGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCTCCAACCCCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  2:7518499/93‑1 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  1:3871450/93‑1 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  2:1458223/93‑1 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  2:2294943/93‑1 (MQ=255)

                                              gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg                                           <  2:3353780/93‑1 (MQ=255)

                                              gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg                                           <  2:7383997/93‑1 (MQ=255)

                                              gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg                                           >  2:2401014/1‑93 (MQ=255)

                                               cgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGc                                          <  1:9439015/93‑1 (MQ=255)

                                               cgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGc                                          >  1:6279979/1‑93 (MQ=255)

                                                 cgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCa                                        <  2:6323390/93‑1 (MQ=255)

                                                   cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt                                      >  1:5104558/1‑93 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAta                                     >  2:4915347/1‑92 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     >  2:7842612/1‑93 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     >  2:9603746/1‑93 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     <  2:5141886/93‑1 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     >  1:10001769/1‑93 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     >  1:5203757/1‑93 (MQ=255)

                                                     ttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGa                                    >  2:6072497/1‑93 (MQ=255)

                                                     ttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGa                                    <  2:5782327/93‑1 (MQ=255)

                                                     ttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGa                                    <  2:469033/93‑1 (MQ=255)

                                                       gtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacg                                  <  2:6532091/93‑2 (MQ=255)

                                                        tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc                                 >  2:8004857/1‑91 (MQ=255)

                                                        tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc                                 <  2:5249201/93‑3 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                >  2:9775896/1‑93 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                <  1:1155106/93‑1 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                <  1:961121/93‑1 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                <  1:7795224/93‑1 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCACACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                <  1:1114371/93‑1 (MQ=255)

                                                            gtgtTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTcg                             >  2:108580/1‑93 (MQ=255)

                                                                tGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGta                         <  2:9147581/93‑1 (MQ=255)

                                                                 ggATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaa                        <  1:9261073/93‑1 (MQ=255)

                                                                   aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata                      >  2:4534161/1‑93 (MQ=255)

                                                                    tGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaataa                     <  2:8782458/93‑1 (MQ=255)

                                                                     gCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAc                    <  1:6209191/93‑1 (MQ=255)

                                                                     gCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAc                    >  1:3012750/1‑93 (MQ=255)

                                                                       cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                  >  2:9093026/1‑93 (MQ=255)

                                                                          tACCAGAAACTCATCCTCACCTGGACGCGCCAACGCCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc               <  1:1934280/93‑1 (MQ=255)

                                                                          tACCAGAAACTCATCCTCACCTGGACGCGCCAACATCTGGTCATGTTCGAGACAGCTTAAAATAGCCGAGGACGCGTCGCGTAATAACTGGTc               >  2:5566454/1‑93 (MQ=255)

                                                                          tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc               <  1:5763157/93‑1 (MQ=255)

                                                                          tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc               <  1:6140971/93‑1 (MQ=255)

                                                                           aCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCa              <  1:3189831/93‑1 (MQ=255)

                                                                           aCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCa              <  2:56982/93‑1 (MQ=255)

                                                                               gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa          >  2:8587176/1‑93 (MQ=255)

                                                                               gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa          >  2:1679825/1‑93 (MQ=255)

                                                                                 aaCTCATCCTCCCTTGGAAGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac        <  1:4125217/93‑1 (MQ=255)

                                                                                 aaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac        <  1:2912123/93‑1 (MQ=255)

                                                                                  aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca       >  1:7253825/1‑93 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     >  1:8074624/1‑93 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     <  1:8310488/93‑1 (MQ=255)

                                                                                     cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt    >  1:5915691/1‑93 (MQ=255)

                                                                                       tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc  >  1:1654139/1‑93 (MQ=255)

                                                                                       tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc  >  2:8350911/1‑93 (MQ=255)

                                                                                       tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc  >  2:3085808/1‑93 (MQ=255)

AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC  >  NC_000913/1343733‑1343912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT  >  NC_000913/1343730‑1343916

CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCT                                                                                               >  SRR4302540.9290558/1‑94 (MQ=60)

CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCT                                                                                               <  SRR4302540.3100109/94‑1 (MQ=60)

 GAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTC                                                                                              <  SRR4302540.2839136/94‑1 (MQ=60)

 GAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTC                                                                                              >  SRR4302540.118881/1‑94 (MQ=60)

  AAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCA                                                                                             <  SRR4302540.5925515/94‑1 (MQ=60)

  AAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCA                                                                                             >  SRR4302540.8887594/1‑94 (MQ=60)

  AAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCA                                                                                             <  SRR4302540.7440520/94‑1 (MQ=60)

   AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAC                                                                                            >  SRR4302540.6538317/1‑94 (MQ=60)

   AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAC                                                                                            >  SRR4302540.2890883/1‑94 (MQ=60)

    AGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACC                                                                                           <  SRR4302540.9652920/94‑1 (MQ=60)

    AGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACC                                                                                           >  SRR4302540.2355364/1‑94 (MQ=60)

    AGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACC                                                                                           <  SRR4302540.7351654/94‑1 (MQ=60)

    AGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACC                                                                                           >  SRR4302540.5616322/1‑94 (MQ=60)

    AGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGCGTTGGATGCCAGTACCAGAAACTCATCCTCACC                                                                                           >  SRR4302540.5767687/1‑94 (MQ=60)

     GGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCT                                                                                          <  SRR4302540.6338409/94‑1 (MQ=60)

     GGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCT                                                                                          <  SRR4302540.6513782/94‑1 (MQ=60)

      GGGAGCCGGAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTG                                                                                         <  SRR4302540.8773218/94‑1 (MQ=60)

       GGAGCCGTAAGCGGGTCTAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGG                                                                                        <  SRR4302540.9099250/94‑1 (MQ=60)

       GGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGG                                                                                        >  SRR4302540.5101184/1‑94 (MQ=60)

       GGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGG                                                                                        <  SRR4302540.3034407/94‑1 (MQ=60)

         AGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAC                                                                                      <  SRR4302540.8946086/94‑1 (MQ=60)

         AGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAC                                                                                      >  SRR4302540.36127/1‑94 (MQ=60)

          GCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACG                                                                                     <  SRR4302540.6104891/94‑1 (MQ=60)

           CCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGC                                                                                    <  SRR4302540.10064246/94‑1 (MQ=60)

           CCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGC                                                                                    >  SRR4302540.9043071/1‑94 (MQ=60)

           CCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGC                                                                                    <  SRR4302540.5256185/94‑1 (MQ=60)

           CCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGC                                                                                    >  SRR4302540.8859855/1‑94 (MQ=60)

            CGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCG                                                                                   <  SRR4302540.7210792/94‑1 (MQ=60)

             GTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGC                                                                                  >  SRR4302540.1022119/1‑94 (MQ=60)

             GTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGC                                                                                  >  SRR4302540.666495/1‑94 (MQ=60)

              TAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCC                                                                                 >  SRR4302540.4820966/1‑94 (MQ=60)

               AAGCGGGTCAAAATTCGTGATGCCATTTCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCA                                                                                >  SRR4302540.9028877/1‑94 (MQ=60)

                AGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAA                                                                               >  SRR4302540.7398708/1‑94 (MQ=60)

                 GCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAAC                                                                              <  SRR4302540.9006885/94‑1 (MQ=60)

                 GCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAAC                                                                              >  SRR4302540.1543350/1‑94 (MQ=60)

                   GGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAC                                                                            <  SRR4302540.355764/94‑1 (MQ=60)

                   GGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAC                                                                            <  SRR4302540.8947470/94‑1 (MQ=60)

                    GGTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC                                                                           >  SRR4302540.7542116/1‑94 (MQ=60)

                    GGTCAAAATTCGTGATGCCATTGCTTCCGGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC                                                                           >  SRR4302540.6989224/1‑94 (MQ=60)

                    GGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC                                                                           >  SRR4302540.6708331/1‑94 (MQ=60)

                     GTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCT                                                                          >  SRR4302540.2311821/1‑94 (MQ=60)

                     GTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCT                                                                          >  SRR4302540.9293029/1‑94 (MQ=60)

                     GTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCT                                                                          <  SRR4302540.8206694/94‑1 (MQ=60)

                     GTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCT                                                                          <  SRR4302540.9530320/94‑1 (MQ=60)

                      TCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCGAACACCTG                                                                         >  SRR4302540.8935028/1‑94 (MQ=60)

                       CAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGG                                                                        <  SRR4302540.2908047/94‑1 (MQ=60)

                        AAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGT                                                                       <  SRR4302540.3726223/94‑1 (MQ=60)

                        AAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGT                                                                       <  SRR4302540.3726222/94‑1 (MQ=60)

                        AAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACATGGT                                                                       >  SRR4302540.3455751/1‑94 (MQ=60)

                          AATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCA                                                                     <  SRR4302540.3480980/94‑1 (MQ=60)

                           ATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCAT                                                                    <  SRR4302540.6052138/94‑1 (MQ=60)

                            TTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATG                                                                   <  SRR4302540.7283712/94‑1 (MQ=60)

                            TTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATG                                                                   >  SRR4302540.3790825/1‑94 (MQ=60)

                            TTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATG                                                                   >  SRR4302540.3790826/1‑94 (MQ=60)

                              CGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTT                                                                 >  SRR4302540.4921520/1‑94 (MQ=60)

                              CGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTT                                                                 >  SRR4302540.789200/1‑94 (MQ=60)

                              CGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTT                                                                 >  SRR4302540.1297354/1‑94 (MQ=60)

                              CGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTCGTCATGTC                                                                 >  SRR4302540.2628103/1‑94 (MQ=60)

                               GTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTC                                                                <  SRR4302540.3771600/94‑1 (MQ=60)

                                TGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCG                                                               <  SRR4302540.6632092/94‑1 (MQ=60)

                                 GATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGA                                                              >  SRR4302540.2148538/1‑94 (MQ=60)

                                  ATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAG                                                             >  SRR4302540.6877769/1‑94 (MQ=60)

                                  ATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAG                                                             >  SRR4302540.7332812/1‑94 (MQ=60)

                                  ATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGCTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAG                                                             >  SRR4302540.5692542/1‑94 (MQ=60)

                                   TGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGA                                                            >  SRR4302540.91180/1‑94 (MQ=60)

                                    GCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAC                                                           >  SRR4302540.9861859/1‑94 (MQ=60)

                                      CATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAG                                                         >  SRR4302540.3719302/1‑94 (MQ=60)

                                      CATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAG                                                         <  SRR4302540.8743779/94‑1 (MQ=60)

                                      CATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAG                                                         >  SRR4302540.3468662/1‑94 (MQ=60)

                                       ATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGC                                                        >  SRR4302540.92502/1‑94 (MQ=60)

                                       ATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGC                                                        <  SRR4302540.2366869/94‑1 (MQ=60)

                                        TTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCT                                                       <  SRR4302540.5717185/94‑1 (MQ=60)

                                        TTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCT                                                       >  SRR4302540.1512031/1‑94 (MQ=60)

                                         TGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTT                                                      >  SRR4302540.261083/1‑94 (MQ=60)

                                         TGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTT                                                      <  SRR4302540.2582754/94‑1 (MQ=60)

                                           CTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAA                                                    <  SRR4302540.1780647/94‑1 (MQ=60)

                                           CTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAA                                                    >  SRR4302540.8898112/1‑94 (MQ=60)

                                            TTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAA                                                   <  SRR4302540.6189806/94‑1 (MQ=60)

                                            TTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAA                                                   >  SRR4302540.5887654/1‑94 (MQ=60)

                                             TCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAA                                                  <  SRR4302540.6496553/94‑1 (MQ=60)

                                              CCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAT                                                 <  SRR4302540.6678596/94‑1 (MQ=60)

                                              CCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAT                                                 <  SRR4302540.196817/94‑1 (MQ=60)

                                              CCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAT                                                 <  SRR4302540.6678597/94‑1 (MQ=60)

                                               CAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATA                                                >  SRR4302540.4584983/1‑94 (MQ=60)

                                               CAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATA                                                <  SRR4302540.2016087/94‑1 (MQ=60)

                                                AGCGCGCTTTGTGAGGTGTTGGATGCCAGTCCCAGAAACTCATCCTCACCTGGACGCGCCAACCCCTGGTCATGTTCGAGACAGCTTAAAATAG                                               <  SRR4302540.7356772/94‑1 (MQ=60)

                                                AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG                                               >  SRR4302540.6152594/1‑94 (MQ=60)

                                                AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG                                               >  SRR4302540.1197714/1‑94 (MQ=60)

                                                AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG                                               <  SRR4302540.3913536/94‑1 (MQ=60)

                                                AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG                                               >  SRR4302540.8090845/1‑94 (MQ=60)

                                                 GCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGC                                              <  SRR4302540.9571465/94‑1 (MQ=60)

                                                 GCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGC                                              <  SRR4302540.934942/94‑1 (MQ=60)

                                                 GCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGC                                              >  SRR4302540.6349862/1‑94 (MQ=60)

                                                  CGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCC                                             <  SRR4302540.9551105/94‑1 (MQ=60)

                                                  CGCGCTTTGTGAGGTGTGGGATGCCAGTACCAGAAACTCTTCCTCTCCTGGGCGCGCCAACCCCTGGTCATGTTCGAGACAGCTTAAAATAGCC                                             <  SRR4302540.2319086/94‑1 (MQ=60)

                                                    CGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAA                                           <  SRR4302540.3648417/94‑1 (MQ=60)

                                                    CGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAA                                           >  SRR4302540.4797637/1‑94 (MQ=60)

                                                    CGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAA                                           >  SRR4302540.3993760/1‑94 (MQ=60)

                                                     GCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAT                                          >  SRR4302540.1684851/1‑94 (MQ=60)

                                                     GCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAT                                          >  SRR4302540.5159818/1‑94 (MQ=60)

                                                      CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG                                         >  SRR4302540.5260437/1‑94 (MQ=60)

                                                      CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG                                         >  SRR4302540.3255495/1‑94 (MQ=60)

                                                      CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG                                         >  SRR4302540.10118282/1‑94 (MQ=60)

                                                        TTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAC                                       <  SRR4302540.8311271/94‑1 (MQ=60)

                                                        TTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAC                                       <  SRR4302540.9978963/94‑1 (MQ=60)

                                                         tgggagggggtggaaggcagtaccaagaaccCATCCCCAGCGGGACGCGCCAACACCTGGTCATGTGCGAGACAGCTTAAAATAGCCAATGACA                                      <  SRR4302540.3476653/63‑1 (MQ=60)

                                                         TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACG                                      >  SRR4302540.6613285/1‑94 (MQ=60)

                                                           TGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG                                    >  SRR4302540.3236912/1‑94 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATTTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.1125914/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.1167128/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.7886338/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.7886337/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.1125913/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.971065/94‑1 (MQ=60)

                                                            GAGGTGTTGGATGCCAGTACCAGAAACTCATCCACACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                   <  SRR4302540.1125912/94‑1 (MQ=60)

                                                             AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                  <  SRR4302540.10139631/94‑1 (MQ=60)

                                                             AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                  <  SRR4302540.2474231/94‑1 (MQ=60)

                                                             AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                  <  SRR4302540.3030780/94‑1 (MQ=60)

                                                             AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                  <  SRR4302540.7431200/94‑1 (MQ=60)

                                                               GTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGC                                >  SRR4302540.606273/1‑94 (MQ=60)

                                                                 GTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGT                              <  SRR4302540.7334484/94‑1 (MQ=60)

                                                                   TGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAA                            <  SRR4302540.3213720/94‑1 (MQ=60)

                                                                    GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCGAATGACGCGTCGCGTAAT                           <  SRR4302540.9371861/94‑1 (MQ=60)

                                                                    GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                           <  SRR4302540.249174/94‑1 (MQ=60)

                                                                    GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                           >  SRR4302540.6707372/1‑94 (MQ=60)

                                                                    GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                           >  SRR4302540.5922594/1‑94 (MQ=60)

                                                                    GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                           <  SRR4302540.9371860/94‑1 (MQ=60)

                                                                      ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                         >  SRR4302540.532891/1‑94 (MQ=60)

                                                                      ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                         <  SRR4302540.6855308/94‑1 (MQ=60)

                                                                      ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                         <  SRR4302540.6855309/94‑1 (MQ=60)

                                                                       TGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAct                        >  SRR4302540.3076409/1‑92 (MQ=60)

                                                                       TGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC                        >  SRR4302540.3045884/1‑94 (MQ=60)

                                                                       TGCCAGGACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC                        <  SRR4302540.3164341/94‑1 (MQ=60)

                                                                        GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT                       >  SRR4302540.1603820/1‑94 (MQ=60)

                                                                        GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT                       <  SRR4302540.6278294/94‑1 (MQ=60)

                                                                         CCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTG                      >  SRR4302540.1533240/1‑94 (MQ=60)

                                                                            GTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTC                   >  SRR4302540.9540720/1‑94 (MQ=60)

                                                                            GTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTC                   >  SRR4302540.9540722/1‑94 (MQ=60)

                                                                             TACCAGAAACTCATCCTCACCTGGACGCGCCAACGCCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                  <  SRR4302540.1955358/94‑1 (MQ=60)

                                                                             TACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                  <  SRR4302540.5826791/94‑1 (MQ=60)

                                                                             TACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                  <  SRR4302540.6209364/94‑1 (MQ=60)

                                                                              TCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                 <  SRR4302540.1170992/94‑1 (MQ=60)

                                                                              ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                 <  SRR4302540.3224481/94‑1 (MQ=60)

                                                                              ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                 <  SRR4302540.9478493/94‑1 (MQ=60)

                                                                              ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                 <  SRR4302540.8707551/94‑1 (MQ=60)

                                                                               CCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACC                >  SRR4302540.555385/1‑94 (MQ=60)

                                                                                CAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCA               >  SRR4302540.7470843/1‑94 (MQ=60)

                                                                                 AGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAA              >  SRR4302540.288985/1‑94 (MQ=60)

                                                                                  GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTCATAACTGGTCACCAAA             >  SRR4302540.6241019/1‑94 (MQ=60)

                                                                                  GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAA             >  SRR4302540.6241018/1‑94 (MQ=60)

                                                                                  GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAA             <  SRR4302540.9403008/94‑1 (MQ=60)

                                                                                   AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC            >  SRR4302540.7844534/1‑94 (MQ=60)

                                                                                   AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC            >  SRR4302540.7844533/1‑94 (MQ=60)

                                                                                   AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC            >  SRR4302540.4132991/1‑94 (MQ=60)

                                                                                    AACTCATCCTCCCTTGGAAGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA           <  SRR4302540.4169777/94‑1 (MQ=60)

                                                                                    AACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA           <  SRR4302540.2943961/94‑1 (MQ=60)

                                                                                    AACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA           >  SRR4302540.7334773/1‑94 (MQ=60)

                                                                                     ACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAA          <  SRR4302540.6303738/94‑1 (MQ=60)

                                                                                      CTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAA         >  SRR4302540.8168323/1‑94 (MQ=60)

                                                                                      CTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAA         <  SRR4302540.5187258/94‑1 (MQ=60)

                                                                                       TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT        <  SRR4302540.1634049/94‑1 (MQ=60)

                                                                                       TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT        <  SRR4302540.8406964/94‑1 (MQ=60)

                                                                                       TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT        >  SRR4302540.5981044/1‑94 (MQ=60)

                                                                                         ATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGC      >  SRR4302540.1672161/1‑94 (MQ=60)

                                                                                           CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC    <  SRR4302540.5055933/94‑1 (MQ=60)

                                                                                           CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC    <  SRR4302540.5739407/94‑1 (MQ=60)

                                                                                            CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA   <  SRR4302540.9440174/94‑1 (MQ=60)

                                                                                            CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA   <  SRR4302540.9440175/94‑1 (MQ=60)

                                                                                            CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA   >  SRR4302540.2266428/1‑94 (MQ=60)

                                                                                             TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT  >  SRR4302540.874213/1‑94 (MQ=60)

                                                                                             TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT  <  SRR4302540.6799341/94‑1 (MQ=60)

CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT  >  NC_000913/1343730‑1343916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`