Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,343,880	A→G	V296A (GTG→GCG)	yciR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,343,880	0	A	G	100.0%	931.1 / NA	289	V296A (GTG→GCG)	yciR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (159/130); total (159/130)

Only 100 of 306 total aligned reads displayed.

GAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACT  >  NC_000913/1343790‑1343969

gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                                                                         >  2:9775896/1‑93 (MQ=255)

gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                                                                         <  1:7795225/93‑1 (MQ=255)

gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                                                                         >  1:3202138/1‑93 (MQ=255)

gAGGTGTTGGATGCCAGTACCAGAAACTCATCCACACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                                                                         <  1:1114371/93‑1 (MQ=255)

 aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                                                                                        <  1:10022997/93‑1 (MQ=255)

 aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                                                                                        <  2:913824/93‑1 (MQ=255)

 aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                                                                                        <  1:2447875/93‑1 (MQ=255)

  ggTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTc                                                                                       >  2:3911384/1‑93 (MQ=255)

     gtTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTcgcg                                                                                    >  2:9045473/1‑93 (MQ=255)

       tGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGta                                                                                  <  1:3179175/93‑1 (MQ=255)

        ggATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaa                                                                                 <  1:9261073/93‑1 (MQ=255)

         gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat                                                                                >  1:5857808/1‑93 (MQ=255)

         gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat                                                                                >  1:6633951/1‑93 (MQ=255)

         gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat                                                                                <  2:4824143/93‑1 (MQ=255)

          aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata                                                                               >  2:4534161/1‑93 (MQ=255)

           tGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaataa                                                                              >  2:101335/1‑93 (MQ=255)

              cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                                                                           >  2:4233932/1‑93 (MQ=255)

              cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                                                                           <  2:6330379/93‑1 (MQ=255)

              cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                                                                           >  1:1516467/1‑93 (MQ=255)

                 tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc                                                                        <  1:5763157/93‑1 (MQ=255)

                 tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc                                                                        >  1:9428703/1‑93 (MQ=255)

                 tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc                                                                        <  1:6140971/93‑1 (MQ=255)

                  tccAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCa                                                                       <  1:1158942/92‑1 (MQ=255)

                  aCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCa                                                                       <  1:8607527/93‑1 (MQ=255)

                  aCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCa                                                                       <  2:56982/93‑1 (MQ=255)

                    cAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAcc                                                                     >  1:549401/1‑93 (MQ=255)

                      gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa                                                                   >  2:1679825/1‑93 (MQ=255)

                      gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa                                                                   >  1:286167/1‑93 (MQ=255)

                       aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTCATAACTGGTCACcaaa                                                                  >  1:6172251/1‑93 (MQ=255)

                        aaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac                                                                 >  1:7753979/1‑93 (MQ=255)

                          cTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaa                                                               <  1:5131677/93‑1 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                              <  2:3637772/93‑1 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                              >  1:8074624/1‑93 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                              <  1:1616319/93‑1 (MQ=255)

                              tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc                                                           >  2:5859614/1‑93 (MQ=255)

                              tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc                                                           >  2:8350911/1‑93 (MQ=255)

                              tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc                                                           >  2:3085808/1‑93 (MQ=255)

                               cctcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGcc                                                          <  1:5676898/90‑1 (MQ=255)

                                ctcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGccc                                                         <  1:9328928/91‑1 (MQ=255)

                                 tcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCa                                                        >  2:8778254/2‑93 (MQ=255)

                                   cccTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATa                                                      <  2:6847894/92‑1 (MQ=255)

                                   aCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATa                                                      >  2:6648027/1‑93 (MQ=255)

                                   aCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATa                                                      <  1:7263358/93‑1 (MQ=255)

                                    ccTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAg                                                     >  2:2045334/1‑93 (MQ=255)

                                    ccTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAg                                                     >  2:2456767/1‑93 (MQ=255)

                                     cTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAgg                                                    >  2:946730/1‑93 (MQ=255)

                                      tGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGc                                                   >  1:3948965/1‑93 (MQ=255)

                                       ggACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcg                                                  <  2:7004753/93‑1 (MQ=255)

                                       ggACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAAAAATGCCCATAGGcg                                                  >  1:2531388/1‑93 (MQ=255)

                                        gACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgt                                                 >  2:7472353/1‑93 (MQ=255)

                                         aCGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgtc                                                <  1:4950638/93‑1 (MQ=255)

                                           gcgcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgtcgt                                              >  2:7257492/1‑93 (MQ=255)

                                            cgcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGtt                                             <  1:3823318/93‑1 (MQ=255)

                                            cgcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGtt                                             <  1:6797907/93‑1 (MQ=255)

                                             gcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTg                                            >  2:5122083/1‑93 (MQ=255)

                                               cAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAc                                          <  2:6074631/93‑1 (MQ=255)

                                                aaCACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAcc                                         >  2:8887173/1‑93 (MQ=255)

                                                 acacCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCt                                        <  1:4107505/93‑1 (MQ=255)

                                                 acacCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCt                                        <  2:4397321/93‑1 (MQ=255)

                                                  cacCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCtt                                       >  1:1898524/1‑93 (MQ=255)

                                                    ccTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCtttt                                     >  1:9661666/1‑93 (MQ=255)

                                                     cTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCttttt                                    >  1:3142502/1‑93 (MQ=255)

                                                        gTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGaa                                 >  1:1129974/1‑93 (MQ=255)

                                                         tCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGaaa                                >  2:1919567/1‑93 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTa                             >  1:6754438/1‑93 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTa                             >  1:4029733/1‑93 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTa                             >  2:1192827/1‑93 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTa                             >  1:451025/1‑93 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTa                             >  2:2276137/1‑93 (MQ=255)

                                                               tCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATcc                          <  1:7135256/93‑1 (MQ=255)

                                                                cGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCa                         >  1:6483377/1‑93 (MQ=255)

                                                                   gaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAt                      >  1:1965876/1‑93 (MQ=255)

                                                                    aCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATc                     <  1:3540265/93‑1 (MQ=255)

                                                                     cAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCa                    >  2:3847041/1‑93 (MQ=255)

                                                                      aGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCaa                   >  1:6832498/1‑93 (MQ=255)

                                                                       gCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAg                  >  2:4082593/1‑93 (MQ=255)

                                                                        cTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGa                 <  1:6970284/93‑1 (MQ=255)

                                                                        cTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGa                 <  2:4956205/93‑1 (MQ=255)

                                                                         ttAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGAt                <  1:2971983/93‑1 (MQ=255)

                                                                         ttAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGAt                >  1:9743160/1‑93 (MQ=255)

                                                                             aaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATacac            <  2:280087/93‑1 (MQ=255)

                                                                               tAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCTTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACaa          <  2:7704094/93‑1 (MQ=255)

                                                                               tAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACaa          <  2:3245319/93‑1 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAc         <  1:4770985/93‑1 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAc         >  1:3740261/1‑93 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAc         <  2:5274847/93‑1 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAc         <  2:3475790/93‑1 (MQ=255)

                                                                                 gCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAcc        <  1:9527718/93‑1 (MQ=255)

                                                                                 gCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAcc        >  1:7568616/1‑93 (MQ=255)

                                                                                 gCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGAGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAcc        >  1:4149621/1‑93 (MQ=255)

                                                                                  ccAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAccc       >  1:6273855/1‑93 (MQ=255)

                                                                                   cAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAcccc      >  1:535605/1‑93 (MQ=255)

                                                                                     aTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCaa    >  2:5493313/1‑93 (MQ=255)

                                                                                     aTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCaa    >  1:3091804/1‑93 (MQ=255)

                                                                                     aTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCaa    >  2:9264460/1‑93 (MQ=255)

                                                                                     aTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCaa    >  1:1749800/1‑93 (MQ=255)

                                                                                      tGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAc   >  2:4014069/1‑93 (MQ=255)

                                                                                      tGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAc   <  2:1458343/93‑1 (MQ=255)

                                                                                      tGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAc   >  1:7017620/1‑93 (MQ=255)

                                                                                      agACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAc   <  1:9016998/92‑1 (MQ=255)

GAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACT  >  NC_000913/1343790‑1343969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTTTAT  >  NC_000913/1343787‑1343973

tgggagggggtggaaggcagtaccaagaaccCATCCCCAGCGGGACGCGCCAACACCTGGTCATGTGCGAGACAGCTTAAAATAGCCAATGACA                                                                                               <  SRR4302540.3476653/63‑1 (MQ=60)

TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACG                                                                                               >  SRR4302540.6613285/1‑94 (MQ=60)

  TGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG                                                                                             >  SRR4302540.3236912/1‑94 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATTTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.1125914/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.971065/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.1125913/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.7886338/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.1167128/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.7886337/94‑1 (MQ=60)

   GAGGTGTTGGATGCCAGTACCAGAAACTCATCCACACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGT                                                                                            <  SRR4302540.1125912/94‑1 (MQ=60)

    AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                                                                           <  SRR4302540.3030780/94‑1 (MQ=60)

    AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                                                                           <  SRR4302540.2474231/94‑1 (MQ=60)

    AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                                                                           <  SRR4302540.10139631/94‑1 (MQ=60)

    AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC                                                                                           <  SRR4302540.7431200/94‑1 (MQ=60)

      GTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGC                                                                                         >  SRR4302540.606273/1‑94 (MQ=60)

        GTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGT                                                                                       <  SRR4302540.7334484/94‑1 (MQ=60)

          TGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAA                                                                                     <  SRR4302540.3213720/94‑1 (MQ=60)

           GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCGAATGACGCGTCGCGTAAT                                                                                    <  SRR4302540.9371861/94‑1 (MQ=60)

           GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                                                                                    >  SRR4302540.6707372/1‑94 (MQ=60)

           GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                                                                                    <  SRR4302540.249174/94‑1 (MQ=60)

           GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                                                                                    >  SRR4302540.5922594/1‑94 (MQ=60)

           GGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAAT                                                                                    <  SRR4302540.9371860/94‑1 (MQ=60)

             ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                                                                                  <  SRR4302540.6855309/94‑1 (MQ=60)

             ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                                                                                  <  SRR4302540.6855308/94‑1 (MQ=60)

             ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA                                                                                  >  SRR4302540.532891/1‑94 (MQ=60)

              TGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAct                                                                                 >  SRR4302540.3076409/1‑92 (MQ=60)

              TGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC                                                                                 >  SRR4302540.3045884/1‑94 (MQ=60)

              TGCCAGGACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC                                                                                 <  SRR4302540.3164341/94‑1 (MQ=60)

               GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT                                                                                <  SRR4302540.6278294/94‑1 (MQ=60)

               GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT                                                                                >  SRR4302540.1603820/1‑94 (MQ=60)

                CCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTG                                                                               >  SRR4302540.1533240/1‑94 (MQ=60)

                   GTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTC                                                                            >  SRR4302540.9540720/1‑94 (MQ=60)

                   GTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTC                                                                            >  SRR4302540.9540722/1‑94 (MQ=60)

                    TACCAGAAACTCATCCTCACCTGGACGCGCCAACGCCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                                                                           <  SRR4302540.1955358/94‑1 (MQ=60)

                    TACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                                                                           <  SRR4302540.6209364/94‑1 (MQ=60)

                    TACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA                                                                           <  SRR4302540.5826791/94‑1 (MQ=60)

                     TCCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                                                                          <  SRR4302540.1170992/94‑1 (MQ=60)

                     ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                                                                          <  SRR4302540.8707551/94‑1 (MQ=60)

                     ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                                                                          <  SRR4302540.9478493/94‑1 (MQ=60)

                     ACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAC                                                                          <  SRR4302540.3224481/94‑1 (MQ=60)

                      CCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACC                                                                         >  SRR4302540.555385/1‑94 (MQ=60)

                       CAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCA                                                                        >  SRR4302540.7470843/1‑94 (MQ=60)

                        AGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAA                                                                       >  SRR4302540.288985/1‑94 (MQ=60)

                         GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTCATAACTGGTCACCAAA                                                                      >  SRR4302540.6241019/1‑94 (MQ=60)

                         GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAA                                                                      <  SRR4302540.9403008/94‑1 (MQ=60)

                         GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAA                                                                      >  SRR4302540.6241018/1‑94 (MQ=60)

                          AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC                                                                     >  SRR4302540.4132991/1‑94 (MQ=60)

                          AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC                                                                     >  SRR4302540.7844533/1‑94 (MQ=60)

                          AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC                                                                     >  SRR4302540.7844534/1‑94 (MQ=60)

                           AACTCATCCTCCCTTGGAAGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA                                                                    <  SRR4302540.4169777/94‑1 (MQ=60)

                           AACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA                                                                    >  SRR4302540.7334773/1‑94 (MQ=60)

                           AACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACA                                                                    <  SRR4302540.2943961/94‑1 (MQ=60)

                            ACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAA                                                                   <  SRR4302540.6303738/94‑1 (MQ=60)

                             CTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAA                                                                  <  SRR4302540.5187258/94‑1 (MQ=60)

                             CTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAA                                                                  >  SRR4302540.8168323/1‑94 (MQ=60)

                              TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT                                                                 <  SRR4302540.1634049/94‑1 (MQ=60)

                              TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT                                                                 <  SRR4302540.8406964/94‑1 (MQ=60)

                              TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT                                                                 >  SRR4302540.5981044/1‑94 (MQ=60)

                                ATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGC                                                               >  SRR4302540.1672161/1‑94 (MQ=60)

                                  CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC                                                             <  SRR4302540.5739407/94‑1 (MQ=60)

                                  CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC                                                             <  SRR4302540.5055933/94‑1 (MQ=60)

                                   CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA                                                            <  SRR4302540.9440174/94‑1 (MQ=60)

                                   CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA                                                            <  SRR4302540.9440175/94‑1 (MQ=60)

                                   CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA                                                            >  SRR4302540.2266428/1‑94 (MQ=60)

                                    TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT                                                           <  SRR4302540.6799341/94‑1 (MQ=60)

                                    TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT                                                           >  SRR4302540.874213/1‑94 (MQ=60)

                                     CACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATA                                                          <  SRR4302540.9612922/94‑1 (MQ=60)

                                     CACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATA                                                          <  SRR4302540.9801624/94‑1 (MQ=60)

                                      CCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAG                                                         <  SRR4302540.3509798/94‑1 (MQ=60)

                                      CCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAG                                                         <  SRR4302540.1321396/94‑1 (MQ=60)

                                      ACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAG                                                         <  SRR4302540.7344408/94‑1 (MQ=60)

                                       CCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGG                                                        <  SRR4302540.4162412/94‑1 (MQ=60)

                                       CCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGG                                                        >  SRR4302540.7766497/1‑94 (MQ=60)

                                        CTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGC                                                       <  SRR4302540.9332940/94‑1 (MQ=60)

                                        CTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGC                                                       >  SRR4302540.3991604/1‑94 (MQ=60)

                                         TGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCG                                                      >  SRR4302540.6425760/1‑94 (MQ=60)

                                         TGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAAAAATGCCCATAGGCG                                                      >  SRR4302540.2558701/1‑94 (MQ=60)

                                         TGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACAAAACAAATGCCCATAGGCG                                                      >  SRR4302540.2558702/1‑94 (MQ=60)

                                          GGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGT                                                     <  SRR4302540.5712485/94‑1 (MQ=60)

                                          GGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGT                                                     >  SRR4302540.3942627/1‑94 (MQ=60)

                                            ACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCG                                                   <  SRR4302540.5775848/94‑1 (MQ=60)

                                            ACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCG                                                   <  SRR4302540.5004122/94‑1 (MQ=60)

                                             CGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGT                                                  >  SRR4302540.6415400/1‑94 (MQ=60)

                                             CGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGGCGT                                                  >  SRR4302540.5835863/1‑94 (MQ=60)

                                              GCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTT                                                 <  SRR4302540.6609158/94‑1 (MQ=60)

                                              GCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTT                                                 <  SRR4302540.8879910/94‑1 (MQ=60)

                                              GCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCATT                                                 >  SRR4302540.3182702/1‑94 (MQ=60)

                                              CCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACGGGTCACCAAACAAATGCCCATAGGCGTCGTT                                                 <  SRR4302540.6879433/94‑1 (MQ=60)

                                               CGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTG                                                <  SRR4302540.6873103/94‑1 (MQ=60)

                                               CGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTG                                                <  SRR4302540.3864923/94‑1 (MQ=60)

                                               CGCCAACACCTGGACATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTG                                                <  SRR4302540.6873105/94‑1 (MQ=60)

                                                GCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGC                                               >  SRR4302540.3494569/1‑94 (MQ=60)

                                                GCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGC                                               >  SRR4302540.5620080/1‑94 (MQ=60)

                                                 CCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAC                                              >  SRR4302540.700690/1‑94 (MQ=60)

                                                  CAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACT                                             >  SRR4302540.7977731/1‑94 (MQ=60)

                                                  CAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACC                                             >  SRR4302540.7977730/1‑94 (MQ=60)

                                                    ACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTT                                           <  SRR4302540.4151819/94‑1 (MQ=60)

                                                    ACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTT                                           >  SRR4302540.1919298/1‑94 (MQ=60)

                                                     CACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTT                                          <  SRR4302540.1621890/94‑1 (MQ=60)

                                                      ACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTT                                         >  SRR4302540.9775397/1‑94 (MQ=60)

                                                      ACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTT                                         >  SRR4302540.10150459/1‑94 (MQ=60)

                                                      ACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTT                                         >  SRR4302540.577788/1‑94 (MQ=60)

                                                       CCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTT                                        >  SRR4302540.7161984/1‑94 (MQ=60)

                                                       CCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTT                                        >  SRR4302540.3176758/1‑94 (MQ=60)

                                                        CTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG                                       >  SRR4302540.4805596/1‑94 (MQ=60)

                                                        CTGGTCATGTGCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG                                       <  SRR4302540.7086028/94‑1 (MQ=60)

                                                         TGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGA                                      <  SRR4302540.5448716/94‑1 (MQ=60)

                                                          GGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCGACACAAGGCCCATAGGCGTCGTTGCACTTTTTGAA                                     >  SRR4302540.1141731/1‑94 (MQ=60)

                                                          GGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAA                                     >  SRR4302540.1141730/1‑94 (MQ=60)

                                                          GGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAA                                     <  SRR4302540.675628/94‑1 (MQ=60)

                                                           GTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAA                                    <  SRR4302540.4058728/94‑1 (MQ=60)

                                                            TCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAAT                                   >  SRR4302540.1680327/1‑94 (MQ=60)

                                                            TCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAAT                                   <  SRR4302540.8430414/94‑1 (MQ=60)

                                                             CATGTTCGAGACAGCTTAAAATAGCCAATGCCGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATT                                  <  SRR4302540.3992564/94‑1 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.2409515/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.455829/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.6829068/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.4113190/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.4073183/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.9745818/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGCCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.3697208/1‑94 (MQ=60)

                                                              ATGTTCGAGACAGCTTAAAATAGCCAATGACGCGCCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTA                                 >  SRR4302540.3618666/1‑94 (MQ=60)

                                                               TGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTAT                                <  SRR4302540.1918910/94‑1 (MQ=60)

                                                               TGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTAT                                <  SRR4302540.3926563/94‑1 (MQ=60)

                                                               TGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTAT                                <  SRR4302540.6223764/94‑1 (MQ=60)

                                                               TGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAAGCGTCGTTGACCTTTTTGAAATTAT                                >  SRR4302540.8792144/1‑94 (MQ=60)

                                                                GTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATC                               >  SRR4302540.7078018/1‑94 (MQ=60)

                                                                 TTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCC                              <  SRR4302540.3142852/94‑1 (MQ=60)

                                                                 TTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCC                              <  SRR4302540.1894621/94‑1 (MQ=60)

                                                                  TCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCA                             <  SRR4302540.7214755/94‑1 (MQ=60)

                                                                  TCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCA                             <  SRR4302540.4930256/94‑1 (MQ=60)

                                                                  TCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCA                             >  SRR4302540.6555489/1‑94 (MQ=60)

                                                                    GAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAT                           >  SRR4302540.7882412/1‑94 (MQ=60)

                                                                    GAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAA                           >  SRR4302540.1362384/1‑94 (MQ=60)

                                                                    GAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAA                           >  SRR4302540.5267078/1‑94 (MQ=60)

                                                                     AGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAT                          <  SRR4302540.6230473/94‑1 (MQ=60)

                                                                     AGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAT                          >  SRR4302540.1987226/1‑94 (MQ=60)

                                                                     AGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAT                          <  SRR4302540.3821060/94‑1 (MQ=60)

                                                                     AGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAT                          >  SRR4302540.9346476/1‑94 (MQ=60)

                                                                     AGACAGCTTAAAATAGCCAATGACGCATCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAAT                          >  SRR4302540.5178345/1‑94 (MQ=60)

                                                                       ACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCA                        <  SRR4302540.3578928/94‑1 (MQ=60)

                                                                        CAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAA                       >  SRR4302540.6908170/1‑94 (MQ=60)

                                                                         AGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAG                      >  SRR4302540.4296576/1‑94 (MQ=60)

                                                                         AGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAG                      <  SRR4302540.4738342/94‑1 (MQ=60)

                                                                           CTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGAT                    <  SRR4302540.7047765/94‑1 (MQ=60)

                                                                           CTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGAT                    >  SRR4302540.9857513/1‑94 (MQ=60)

                                                                           CTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGAT                    >  SRR4302540.9857514/1‑94 (MQ=60)

                                                                            TTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATA                   >  SRR4302540.3226449/1‑94 (MQ=60)

                                                                            TTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATA                   <  SRR4302540.3004815/94‑1 (MQ=60)

                                                                             TAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATAC                  <  SRR4302540.1981766/94‑1 (MQ=60)

                                                                             TAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATAC                  >  SRR4302540.2569191/1‑94 (MQ=60)

                                                                              AAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACA                 >  SRR4302540.6957958/1‑94 (MQ=60)

                                                                              AAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACA                 >  SRR4302540.7157523/1‑94 (MQ=60)

                                                                               AAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACAC                >  SRR4302540.5494521/1‑94 (MQ=60)

                                                                                AATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACA               <  SRR4302540.3193047/94‑1 (MQ=60)

                                                                                AATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACA               >  SRR4302540.3384452/1‑94 (MQ=60)

                                                                                  TAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAAC             >  SRR4302540.3781066/1‑94 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            <  SRR4302540.2941051/94‑1 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            >  SRR4302540.4194551/1‑94 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            >  SRR4302540.2526579/1‑94 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            <  SRR4302540.4821950/94‑1 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            >  SRR4302540.7653521/1‑94 (MQ=60)

                                                                                   AGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGAGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACC            >  SRR4302540.4194550/1‑94 (MQ=60)

                                                                                    GCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCC           >  SRR4302540.6343655/1‑94 (MQ=60)

                                                                                    GCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCC           <  SRR4302540.9640524/94‑1 (MQ=60)

                                                                                     CCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCC          >  SRR4302540.541405/1‑94 (MQ=60)

                                                                                      CAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCA         <  SRR4302540.3790361/94‑1 (MQ=60)

                                                                                       AATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAA        >  SRR4302540.3125715/1‑94 (MQ=60)

                                                                                       AATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAA        >  SRR4302540.1768751/1‑94 (MQ=60)

                                                                                        ATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAC       >  SRR4302540.5874469/1‑94 (MQ=60)

                                                                                        ATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAAC       >  SRR4302540.7095552/1‑94 (MQ=60)

                                                                                         TGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACT      >  SRR4302540.6599565/1‑94 (MQ=60)

                                                                                         TGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACT      >  SRR4302540.1039134/1‑94 (MQ=60)

                                                                                         TGACGCGTCGCGTAATAACAGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACT      <  SRR4302540.9893771/94‑1 (MQ=60)

                                                                                          GACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTT     <  SRR4302540.4936255/94‑1 (MQ=60)

                                                                                            CGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTTTA   >  SRR4302540.5362708/1‑94 (MQ=60)

                                                                                             GCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTTTAT  <  SRR4302540.462819/94‑1 (MQ=60)

                                                                                             GCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTTTAT  <  SRR4302540.2337861/94‑1 (MQ=60)

TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAATTATCCAAATCAAGATACACAACCCCAACTTTAT  >  NC_000913/1343787‑1343973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`