Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,343,823 |
C→T |
G315E (GGG→GAG) |
yciR ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,343,823 | 0 | C | T | 100.0%
| 716.0
/ NA
| 193 | G315E (GGG→GAG) | yciR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/98); total (95/98) |
Only 100 of 198 total aligned reads displayed.
AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC > NC_000913/1343733‑1343912
|
aaGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCa > 2:1645978/1‑93 (MQ=255)
gggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCt < 2:4132029/93‑1 (MQ=255)
gggAGCCGTAAGCGGGTCAAAATTCGTAATGCCATTGCTTCCAGCGCGCTTTGTGAGGGGTTGGATGCCAGTACCAGAAACTCATCCTCACCt > 1:811736/1‑93 (MQ=255)
aGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGa < 1:3566062/93‑1 (MQ=255)
ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcg < 1:4956971/93‑1 (MQ=255)
ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCCTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATGCTCACCTGGAcg > 2:2070102/1‑93 (MQ=255)
cGTAAGGGGGTCAAAATTCGGGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcgc < 1:4700710/93‑1 (MQ=255)
tAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACgcgc > 2:3870573/1‑93 (MQ=255)
tAAGCAGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACgcgc > 2:4105786/1‑93 (MQ=255)
aaGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGcc < 2:6087278/93‑1 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa > 1:5243686/1‑93 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa < 2:4592751/93‑1 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa < 2:4744042/93‑1 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa > 1:3740674/1‑93 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa > 2:3937210/1‑93 (MQ=255)
gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa > 1:5542145/1‑93 (MQ=255)
cGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAac > 2:2583193/1‑93 (MQ=255)
cGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGAACCAGAAACTCATCCTCACCTGGACGCGCCAac > 1:639499/1‑93 (MQ=255)
cGGGTCAAAATTCGTGATGCCATTGCTTCCAGAGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAac < 2:3788767/93‑1 (MQ=255)
gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca > 1:530892/1‑93 (MQ=255)
gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca > 1:5566006/1‑93 (MQ=255)
gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca > 1:5429245/1‑93 (MQ=255)
ggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAacac < 1:221968/93‑1 (MQ=255)
gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc < 2:5989430/93‑1 (MQ=255)
gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc > 1:2852339/1‑93 (MQ=255)
tCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCt > 1:3339177/1‑93 (MQ=255)
aaaaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTgg > 1:2647848/1‑93 (MQ=255)
aaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTc > 1:3898406/1‑93 (MQ=255)
aaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTc < 2:4930271/93‑1 (MQ=255)
aTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCa > 2:1117641/1‑93 (MQ=255)
ttCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCAt < 1:1205384/93‑1 (MQ=255)
gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt < 1:3601331/93‑1 (MQ=255)
gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt < 2:3470142/93‑1 (MQ=255)
gATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCg < 1:2499152/93‑1 (MQ=255)
tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag > 2:2455876/1‑93 (MQ=255)
tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag > 2:2643558/1‑93 (MQ=255)
tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag > 1:1516830/1‑93 (MQ=255)
ccATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAc < 2:4240369/93‑1 (MQ=255)
ccATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAc < 2:90276/93‑1 (MQ=255)
cATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACa < 2:617437/93‑1 (MQ=255)
ttGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCCCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGc < 1:3515265/93‑1 (MQ=255)
ttCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaa > 2:940281/1‑93 (MQ=255)
ccAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaaaa > 2:1385076/1‑93 (MQ=255)
cAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAt > 2:576571/1‑93 (MQ=255)
cAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAt < 1:715521/93‑1 (MQ=255)
aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa > 2:175340/1‑93 (MQ=255)
aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa < 1:4422392/93‑1 (MQ=255)
aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa < 1:1957073/93‑1 (MQ=255)
gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg < 1:4997174/93‑1 (MQ=255)
gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg > 2:5453564/1‑93 (MQ=255)
gcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGcc > 2:4001075/1‑93 (MQ=255)
cgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCa > 2:4178513/1‑93 (MQ=255)
cgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCa > 2:2034335/1‑93 (MQ=255)
gcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCaa > 1:297062/1‑93 (MQ=255)
cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt < 2:3655129/93‑1 (MQ=255)
cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt < 2:2218966/93‑1 (MQ=255)
cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt < 1:5794922/93‑1 (MQ=255)
cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt < 1:1391789/93‑1 (MQ=255)
tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg > 2:280120/1‑93 (MQ=255)
tgtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGac < 1:4766644/93‑1 (MQ=255)
tgtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGac > 2:5548529/1‑93 (MQ=255)
gtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacg < 1:6159376/93‑2 (MQ=255)
gtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacg > 1:5986931/1‑92 (MQ=255)
tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc > 1:1106388/1‑91 (MQ=255)
tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc < 1:1896226/93‑3 (MQ=255)
gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg > 1:2397371/1‑93 (MQ=255)
aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt < 2:4041288/93‑1 (MQ=255)
aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt < 1:5212087/93‑1 (MQ=255)
ggTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTc > 2:1240590/1‑93 (MQ=255)
gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat < 1:4148976/93‑1 (MQ=255)
aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata < 1:3867958/93‑1 (MQ=255)
tGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaataa < 1:1088045/93‑1 (MQ=255)
gCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAc < 1:4499515/93‑1 (MQ=255)
ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt < 2:1853746/93‑1 (MQ=255)
ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt > 1:3823720/1‑93 (MQ=255)
cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg > 1:3017307/1‑93 (MQ=255)
cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg > 2:5060590/1‑93 (MQ=255)
aGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTgg > 1:1282924/1‑93 (MQ=255)
gTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGt > 2:4301767/1‑93 (MQ=255)
tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc > 2:5896749/1‑93 (MQ=255)
gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa > 1:1650230/1‑93 (MQ=255)
gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa > 1:1123336/1‑93 (MQ=255)
aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaa < 1:3046703/93‑1 (MQ=255)
aaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac > 2:3015694/1‑93 (MQ=255)
aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca < 2:5840733/93‑1 (MQ=255)
aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca < 2:6290203/93‑1 (MQ=255)
cTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaa < 2:80233/93‑1 (MQ=255)
tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa > 2:3622314/1‑93 (MQ=255)
tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa > 2:5829798/1‑93 (MQ=255)
tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa < 1:5336364/93‑1 (MQ=255)
tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa < 1:4711939/93‑1 (MQ=255)
tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa < 1:792126/93‑1 (MQ=255)
ccATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa < 2:6233804/92‑1 (MQ=255)
cATCCTCACCTGGACGCTCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt < 2:5639462/93‑1 (MQ=255)
cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGGCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt < 1:4088387/93‑1 (MQ=255)
cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt < 2:3232134/93‑1 (MQ=255)
cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt < 2:3514908/93‑1 (MQ=255)
aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg < 1:4623250/93‑1 (MQ=255)
aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg < 1:5838575/93‑1 (MQ=255)
tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc > 1:4004577/1‑93 (MQ=255)
|
AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC > NC_000913/1343733‑1343912
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT > NC_000913/1343730‑1343916
|
CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCT < SRR4302533.704410/94‑1 (MQ=60)
GAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTC > SRR4302533.3739494/1‑94 (MQ=60)
GAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTC > SRR4302533.450606/1‑94 (MQ=60)
AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCAC > SRR4302533.5305042/1‑94 (MQ=60)
GGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCT < SRR4302533.1188240/94‑1 (MQ=60)
GGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCT < SRR4302533.1213999/94‑1 (MQ=60)
GGGGAGCCGTAAGCGGGTCAAAATTCGTAATGCCATTGCTTCCAGCGCGCTTTGTGAGGGGTTGGATGCCAGTACCAGAAACTCATCCTCACCT > SRR4302533.816492/1‑94 (MQ=60)
GGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGGTGGATGCCAGTACCAGAAACTCATCCTCACCTG > SRR4302533.3719170/1‑94 (MQ=60)
GGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGG < SRR4302533.5955280/94‑1 (MQ=60)
GGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGG < SRR4302533.4731584/94‑1 (MQ=60)
AGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAC < SRR4302533.3588040/94‑1 (MQ=60)
GCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACG > SRR4302533.1125422/1‑94 (MQ=60)
CCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGC < SRR4302533.4986997/94‑1 (MQ=60)
CGTAAGGGGGTCAAAATTCGGGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCG < SRR4302533.4729211/94‑1 (MQ=60)
GTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGC > SRR4302533.3603528/1‑94 (MQ=60)
GTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGC > SRR4302533.2645168/1‑94 (MQ=60)
AGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAA > SRR4302533.5575617/1‑94 (MQ=60)
AGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAA > SRR4302533.5275204/1‑94 (MQ=60)
AGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAA > SRR4302533.4869625/1‑94 (MQ=60)
AGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAA > SRR4302533.3763614/1‑94 (MQ=60)
GCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGAACCAGAAACTCATCCTCACCTGGACGCGCCAAC > SRR4302533.643262/1‑94 (MQ=60)
CGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACA > SRR4302533.5461945/1‑94 (MQ=60)
CGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACA > SRR4302533.534050/1‑94 (MQ=60)
CGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACA > SRR4302533.5599648/1‑94 (MQ=60)
GGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC < SRR4302533.5349100/94‑1 (MQ=60)
GGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC > SRR4302533.2869884/1‑94 (MQ=60)
GGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACC < SRR4302533.223357/94‑1 (MQ=60)
GTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCT > SRR4302533.3359815/1‑94 (MQ=60)
TCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTG > SRR4302533.4109569/1‑94 (MQ=60)
CAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGG > SRR4302533.2664116/1‑94 (MQ=60)
AAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGT < SRR4302533.1355439/94‑1 (MQ=60)
AAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTC > SRR4302533.3922190/1‑94 (MQ=60)
AAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTC > SRR4302533.3922189/1‑94 (MQ=60)
AATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAACCTCATCCTCACCTGGCCGCGCCAACACCTGGTCA > SRR4302533.727314/1‑94 (MQ=60)
TTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATG < SRR4302533.1212627/94‑1 (MQ=60)
GTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTC < SRR4302533.3623493/94‑1 (MQ=60)
gcggtggTTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGA < SRR4302533.974752/87‑1 (MQ=60)
GATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGA < SRR4302533.2514569/94‑1 (MQ=60)
GATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGA > SRR4302533.3569729/1‑94 (MQ=60)
ATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAG > SRR4302533.1525963/1‑94 (MQ=60)
GCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAC < SRR4302533.3099586/94‑1 (MQ=60)
GCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAC > SRR4302533.653364/1‑94 (MQ=60)
GCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAC > SRR4302533.1964757/1‑94 (MQ=60)
CATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAG < SRR4302533.6187663/94‑1 (MQ=60)
ATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAACCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGC < SRR4302533.5264053/94‑1 (MQ=60)
TTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCCCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCT < SRR4302533.3536930/94‑1 (MQ=60)
TTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCT > SRR4302533.5019892/1‑94 (MQ=60)
TGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTT < SRR4302533.5855530/94‑1 (MQ=60)
TTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAA < SRR4302533.1765380/94‑1 (MQ=60)
CCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAT < SRR4302533.4704185/94‑1 (MQ=60)
CAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATA > SRR4302533.5585248/1‑94 (MQ=60)
CAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATA < SRR4302533.719742/94‑1 (MQ=60)
AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG > SRR4302533.6200598/1‑94 (MQ=60)
AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG < SRR4302533.4750707/94‑1 (MQ=60)
AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG < SRR4302533.4449131/94‑1 (MQ=60)
AGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAG < SRR4302533.1969017/94‑1 (MQ=60)
GCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGC < SRR4302533.5027470/94‑1 (MQ=60)
GCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGC < SRR4302533.3049122/94‑1 (MQ=60)
CGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAA > SRR4302533.298881/1‑94 (MQ=60)
CGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAA < SRR4302533.1569215/94‑1 (MQ=60)
CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG < SRR4302533.1400174/94‑1 (MQ=60)
CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG < SRR4302533.5829932/94‑1 (MQ=60)
CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG > SRR4302533.247189/1‑94 (MQ=60)
CTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATG < SRR4302533.5559035/94‑1 (MQ=60)
TTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAC > SRR4302533.2915952/1‑94 (MQ=60)
TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACG > SRR4302533.6023188/1‑94 (MQ=60)
TGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACG < SRR4302533.4795545/94‑1 (MQ=60)
GTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGC < SRR4302533.6196420/94‑1 (MQ=60)
GTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGC > SRR4302533.1112950/1‑94 (MQ=60)
TGAGGTGTTGGATGCCAGTACCAGAACCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG < SRR4302533.5372627/94‑1 (MQ=60)
TGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG < SRR4302533.1907800/94‑1 (MQ=60)
TGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG > SRR4302533.2412170/1‑94 (MQ=60)
TGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG > SRR4302533.4615256/1‑94 (MQ=60)
GGAGGTGTTGGATGCCAGTGCCAGAAACTCATCCTCACCTGGACGCGCCAACCCCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCG < SRR4302533.1465654/94‑1 (MQ=60)
AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC < SRR4302533.3021526/94‑1 (MQ=60)
AGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTC < SRR4302533.5243475/94‑1 (MQ=60)
TGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCG > SRR4302533.3876186/1‑94 (MQ=60)
GATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATA < SRR4302533.818449/94‑1 (MQ=60)
GATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATA < SRR4302533.4174115/94‑1 (MQ=60)
GATCCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATA < SRR4302533.5754607/94‑1 (MQ=60)
ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA < SRR4302533.3891573/94‑1 (MQ=60)
ATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAA < SRR4302533.5228455/94‑1 (MQ=60)
TGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC < SRR4302533.1094454/94‑1 (MQ=60)
TACCAGTACCAGAAACTCATCCTCAACTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAC < SRR4302533.2356420/94‑1 (MQ=60)
GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT < SRR4302533.4526762/94‑1 (MQ=60)
GCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACT > SRR4302533.3847098/1‑94 (MQ=60)
CCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTG > SRR4302533.3035762/1‑94 (MQ=60)
CCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTG < SRR4302533.3502581/94‑1 (MQ=60)
CAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGG < SRR4302533.4380236/94‑1 (MQ=60)
CAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGG > SRR4302533.1290644/1‑94 (MQ=60)
TACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCA < SRR4302533.3830799/94‑1 (MQ=60)
CAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCA > SRR4302533.447129/1‑94 (MQ=60)
AGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAA > SRR4302533.3955096/1‑94 (MQ=60)
AGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAA > SRR4302533.1660228/1‑94 (MQ=60)
AGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAA > SRR4302533.1130001/1‑94 (MQ=60)
GAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCAAATGACGCGTCGCGTAATAACTAGTCACCAAA > SRR4302533.266558/1‑94 (MQ=60)
AAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAAC < SRR4302533.3065357/94‑1 (MQ=60)
ACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAA > SRR4302533.2076822/1‑94 (MQ=60)
TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT < SRR4302533.4740497/94‑1 (MQ=60)
TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT < SRR4302533.796787/94‑1 (MQ=60)
TCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAT < SRR4302533.5368353/94‑1 (MQ=60)
CATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGGCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATG < SRR4302533.4113278/94‑1 (MQ=60)
CATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATG < SRR4302533.4132482/94‑1 (MQ=60)
ATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGC < SRR4302533.5873875/94‑1 (MQ=60)
ATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGC < SRR4302533.4651274/94‑1 (MQ=60)
ATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGC > SRR4302533.4028955/1‑94 (MQ=60)
CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC < SRR4302533.966478/94‑1 (MQ=60)
CCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCC > SRR4302533.1023845/1‑94 (MQ=60)
CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA < SRR4302533.5128626/94‑1 (MQ=60)
CTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCA > SRR4302533.4101988/1‑94 (MQ=60)
TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT < SRR4302533.5809493/94‑1 (MQ=60)
TCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT < SRR4302533.3962660/94‑1 (MQ=60)
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CGAAAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCAT > NC_000913/1343730‑1343916
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
