Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,356,924 |
C→T |
P96P (CCG→CCA) |
ycjJ ← |
putative amino acid/amine transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,356,924 | 0 | C | T | 100.0%
| 760.7
/ NA
| 215 | P96P (CCG→CCA) | ycjJ | putative amino acid/amine transport protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (134/81); total (134/81) |
Only 100 of 226 total aligned reads displayed.
GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG > NC_000913/1356834‑1357013
|
ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg > 1:6857636/1‑93 (MQ=255)
ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg > 2:7286040/1‑93 (MQ=255)
ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg > 2:7540521/1‑93 (MQ=255)
gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt > 2:4110159/1‑93 (MQ=255)
agatagatTTTTGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTa > 2:4642911/1‑93 (MQ=255)
agatagatTTTCGCCAACAAGACGTTAATCATCGGCCAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTa > 2:6029584/1‑93 (MQ=255)
gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa > 2:7834056/1‑93 (MQ=255)
atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGATAAt > 2:3851819/1‑93 (MQ=255)
tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc < 2:2691570/93‑1 (MQ=255)
tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc > 1:307011/1‑93 (MQ=255)
agatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCg > 1:813986/1‑93 (MQ=255)
gatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGa < 2:9575843/93‑1 (MQ=255)
atTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGAc < 1:1975623/93‑1 (MQ=255)
ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt > 1:9961247/1‑93 (MQ=255)
tttCGCAAACAAGACGTTAATCATCGTCAAAAAGAGAAAACCCAGCAGCGAATACCGGCCGACCATAAATCCGACGTGTGGGTTAATCGACtt < 2:4539145/93‑1 (MQ=255)
tCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtttt < 2:9416092/93‑1 (MQ=255)
gCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgc < 1:6634686/93‑1 (MQ=255)
ccAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgcg > 2:8361948/1‑93 (MQ=255)
aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg > 1:7162470/1‑93 (MQ=255)
aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg > 1:1698924/1‑93 (MQ=255)
aaaaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg > 1:2021725/4‑93 (MQ=255)
acaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGATAATCGACTTTTGCGCGt > 1:8293645/1‑93 (MQ=255)
caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa > 1:1370700/1‑93 (MQ=255)
aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg > 2:2908126/1‑93 (MQ=255)
aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg > 2:1876938/1‑93 (MQ=255)
aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg < 1:9088135/93‑1 (MQ=255)
gACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgga > 2:8119499/1‑92 (MQ=255)
gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata > 2:906577/1‑93 (MQ=255)
gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata < 1:4278219/93‑1 (MQ=255)
ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg > 1:5328200/1‑93 (MQ=255)
ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg < 2:6590174/93‑1 (MQ=255)
ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg < 2:2397589/93‑1 (MQ=255)
tAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAgg < 1:6071699/93‑1 (MQ=255)
aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCCGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc > 1:3005859/1‑93 (MQ=255)
atcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGcc > 2:5968048/1‑93 (MQ=255)
tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg > 2:9286278/1‑93 (MQ=255)
tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg > 1:9609543/1‑93 (MQ=255)
catcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa > 1:9277029/1‑93 (MQ=255)
tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc < 1:6319818/93‑1 (MQ=255)
tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc > 1:5872751/1‑93 (MQ=255)
tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc < 1:3128165/93‑1 (MQ=255)
tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc > 1:9261923/1‑93 (MQ=255)
cGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAcc > 1:373973/1‑93 (MQ=255)
cGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAcc < 2:8580328/93‑1 (MQ=255)
ggCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCg > 2:7382903/1‑93 (MQ=255)
aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt > 1:696150/1‑93 (MQ=255)
aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt > 1:4419972/1‑93 (MQ=255)
aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt > 1:10012148/1‑93 (MQ=255)
aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc > 1:3339722/1‑93 (MQ=255)
aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc > 2:1327437/1‑93 (MQ=255)
aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc < 1:2735191/93‑1 (MQ=255)
agagATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCg < 1:8982940/93‑1 (MQ=255)
agaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTGTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGa > 1:6213827/1‑93 (MQ=255)
gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa > 2:9315760/1‑93 (MQ=255)
gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa > 1:1481586/1‑93 (MQ=255)
gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa < 2:7951926/93‑1 (MQ=255)
aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa < 2:3534382/93‑1 (MQ=255)
aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa > 2:259466/1‑93 (MQ=255)
aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa < 1:4534462/93‑1 (MQ=255)
tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc > 1:6519900/1‑93 (MQ=255)
tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc < 2:3731212/93‑1 (MQ=255)
tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc > 1:2108597/1‑93 (MQ=255)
aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt > 2:8163936/1‑93 (MQ=255)
agccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCGCCGGAAACTg < 2:414739/91‑1 (MQ=255)
tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGCACCCGCCTCCGGAAACtcg > 2:3962687/1‑91 (MQ=255)
ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc < 2:1603249/93‑1 (MQ=255)
ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc < 2:8585182/93‑1 (MQ=255)
cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGTCCGAACCGGCCTCCGGAAACTGGCGAAc > 2:3012593/1‑93 (MQ=255)
cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAc > 2:7095000/1‑93 (MQ=255)
cagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAc > 1:6149970/1‑93 (MQ=255)
gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa > 2:9791518/1‑93 (MQ=255)
acGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa < 1:5115431/92‑1 (MQ=255)
gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt > 1:7317794/1‑93 (MQ=255)
gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt < 1:8359900/93‑1 (MQ=255)
aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt < 1:2382996/93‑1 (MQ=255)
aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt < 1:8653587/93‑1 (MQ=255)
aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt < 1:7103813/93‑1 (MQ=255)
aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt > 1:975320/1‑93 (MQ=255)
aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt > 2:178729/1‑93 (MQ=255)
aTGACCAGCCGACCATAAACCGGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt < 2:5644727/93‑1 (MQ=255)
tGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt < 1:3593962/93‑1 (MQ=255)
tGACCAGACGACCATAAATCCGACGTATGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt < 2:3984114/93‑1 (MQ=255)
aCCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGc < 2:3455357/93‑1 (MQ=255)
aGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGt < 2:5522768/93‑1 (MQ=255)
aGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGt < 2:525232/93‑1 (MQ=255)
cGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGc > 2:8677962/1‑93 (MQ=255)
gACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCt > 2:5589070/1‑93 (MQ=255)
aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg > 1:4636347/1‑93 (MQ=255)
aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg > 1:790920/1‑93 (MQ=255)
ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa < 2:5183945/93‑1 (MQ=255)
cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt < 2:23027/93‑1 (MQ=255)
aTAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATa < 1:9342778/93‑1 (MQ=255)
tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg > 2:8300677/1‑93 (MQ=255)
tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg > 1:5682959/1‑93 (MQ=255)
aaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg > 2:3277980/1‑93 (MQ=255)
aTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg > 2:144621/1‑93 (MQ=255)
aTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg > 2:4039102/1‑93 (MQ=255)
tCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGt > 2:6233984/1‑93 (MQ=255)
cGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaa > 1:3469565/1‑93 (MQ=255)
cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa > 1:753339/1‑93 (MQ=255)
|
GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG > NC_000913/1356834‑1357013
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGCACA > NC_000913/1356832‑1357017
|
GCGGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTG > SRR4302540.1519225/1‑94 (MQ=60)
CGGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGG > SRR4302540.6933627/1‑94 (MQ=60)
CGGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGG < SRR4302540.6799785/94‑1 (MQ=60)
GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGGAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGG > SRR4302540.7755204/1‑94 (MQ=60)
AGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTT < SRR4302540.8394307/94‑1 (MQ=60)
GATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAT < SRR4302540.7207074/94‑1 (MQ=60)
GATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAT > SRR4302540.8471127/1‑94 (MQ=60)
GATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAT > SRR4302540.5316751/1‑94 (MQ=60)
GATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAT > SRR4302540.6983090/1‑94 (MQ=60)
ATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATG > SRR4302540.9187791/1‑94 (MQ=60)
ATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATC > SRR4302540.1004698/1‑94 (MQ=60)
ATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATC > SRR4302540.310061/1‑94 (MQ=60)
TAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCG > SRR4302540.822630/1‑94 (MQ=60)
AGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGA > SRR4302540.6075483/1‑94 (MQ=60)
GATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGAC > SRR4302540.6711975/1‑94 (MQ=60)
GATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGAC > SRR4302540.936730/1‑94 (MQ=60)
ATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACT < SRR4302540.6627956/94‑1 (MQ=60)
ATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACT > SRR4302540.10077483/1‑94 (MQ=60)
ATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACT < SRR4302540.1997056/94‑1 (MQ=60)
TTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTT > SRR4302540.7445994/1‑94 (MQ=60)
CGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGC < SRR4302540.829489/94‑1 (MQ=60)
GCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCG < SRR4302540.6708113/94‑1 (MQ=60)
CCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGG > SRR4302540.2077695/1‑94 (MQ=60)
CAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCG > SRR4302540.1717324/1‑94 (MQ=60)
CAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCG > SRR4302540.7242320/1‑94 (MQ=60)
CAAAAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCG > SRR4302540.2043582/1‑94 (MQ=60)
AACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGATAATCGACTTTTGCGCGT > SRR4302540.8389953/1‑94 (MQ=60)
ACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTA > SRR4302540.1385227/1‑94 (MQ=60)
ACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTA > SRR4302540.4558936/1‑94 (MQ=60)
AAGACGTTAATCATCTGCAAAAGGAGACAATCGAGCAGCGAGAACCAGCCGACTATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGG < SRR4302540.795845/94‑1 (MQ=60)
AAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGG < SRR4302540.9197316/94‑1 (MQ=60)
AGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGT > SRR4302540.3479820/1‑94 (MQ=60)
gcttaaccgATCGGCAGAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTAT < SRR4302540.454816/85‑1 (MQ=60)
ACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTAT < SRR4302540.265323/94‑1 (MQ=60)
agctcatcagCGGCAGAAAGAGATAATCCAGCAGCGATGACCAGCCCTCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATA < SRR4302540.9768274/84‑1 (MQ=60)
GTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAG > SRR4302540.4109257/1‑94 (MQ=60)
GTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAG < SRR4302540.4324750/94‑1 (MQ=60)
GTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAG > SRR4302540.5386567/1‑94 (MQ=60)
GTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAG < SRR4302540.6307302/94‑1 (MQ=60)
TAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCCGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGC > SRR4302540.3038953/1‑94 (MQ=60)
TAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGC < SRR4302540.6139203/94‑1 (MQ=60)
ATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCG > SRR4302540.9722854/1‑94 (MQ=60)
TCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGA > SRR4302540.3110995/1‑94 (MQ=60)
TCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGA > SRR4302540.9387935/1‑94 (MQ=60)
TCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGA > SRR4302540.9834402/1‑94 (MQ=60)
CATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAA > SRR4302540.9641341/1‑94 (MQ=60)
ATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAC > SRR4302540.5937665/1‑94 (MQ=60)
ATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAC > SRR4302540.9372718/1‑94 (MQ=60)
TCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACC < SRR4302540.6390194/94‑1 (MQ=60)
TCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACC < SRR4302540.3162315/94‑1 (MQ=60)
TCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACC > SRR4302540.377845/1‑94 (MQ=60)
CGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCG > SRR4302540.445289/1‑94 (MQ=60)
GCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGC < SRR4302540.4129727/94‑1 (MQ=60)
CAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCC < SRR4302540.1741813/94‑1 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT > SRR4302540.3164331/1‑94 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT > SRR4302540.4467860/1‑94 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT < SRR4302540.2662820/94‑1 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT > SRR4302540.3562360/1‑94 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT > SRR4302540.10128723/1‑94 (MQ=60)
AAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCT > SRR4302540.703623/1‑94 (MQ=60)
AAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCC > SRR4302540.3376383/1‑94 (MQ=60)
AAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCG < SRR4302540.2764719/94‑1 (MQ=60)
AAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCG > SRR4302540.7263717/1‑94 (MQ=60)
AGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGG < SRR4302540.9090102/94‑1 (MQ=60)
GAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTGTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGA > SRR4302540.6282969/1‑94 (MQ=60)
AGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAA > SRR4302540.1497834/1‑94 (MQ=60)
GATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAA > SRR4302540.4675285/1‑94 (MQ=60)
ATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAC > SRR4302540.6592321/1‑94 (MQ=60)
ATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAC < SRR4302540.8408676/94‑1 (MQ=60)
ATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAC > SRR4302540.4730833/1‑94 (MQ=60)
ATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAC < SRR4302540.4583544/94‑1 (MQ=60)
ATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAC > SRR4302540.2131225/1‑94 (MQ=60)
TCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGC > SRR4302540.8148456/1‑94 (MQ=60)
CCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCG < SRR4302540.1382334/94‑1 (MQ=60)
GCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAC > SRR4302540.6218467/1‑94 (MQ=60)
AGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAcccg > SRR4302540.3262189/1‑90 (MQ=60)
AGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCA > SRR4302540.9322921/1‑94 (MQ=60)
ACGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAG < SRR4302540.5170813/94‑1 (MQ=60)
CGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGT > SRR4302540.5948883/1‑94 (MQ=60)
CGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGT > SRR4302540.7399520/1‑94 (MQ=60)
GATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTT < SRR4302540.8456912/94‑1 (MQ=60)
GATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTT > SRR4302540.985330/1‑94 (MQ=60)
GATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTT < SRR4302540.2173666/94‑1 (MQ=60)
ATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTT < SRR4302540.7182851/94‑1 (MQ=60)
ATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTT < SRR4302540.1725042/94‑1 (MQ=60)
ATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTT < SRR4302540.2408671/94‑1 (MQ=60)
ATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTT < SRR4302540.8754112/94‑1 (MQ=60)
TGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTG < SRR4302540.3633224/94‑1 (MQ=60)
TGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTG < SRR4302540.3633504/94‑1 (MQ=60)
ACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCC > SRR4302540.71188/1‑94 (MQ=60)
CCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCG > SRR4302540.6434726/1‑94 (MQ=60)
CAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGT < SRR4302540.3029093/94‑1 (MQ=60)
AGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTA < SRR4302540.976615/94‑1 (MQ=60)
GACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTG > SRR4302540.799323/1‑94 (MQ=60)
GACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTG > SRR4302540.4685989/1‑94 (MQ=60)
ACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGA < SRR4302540.7492213/94‑1 (MQ=60)
CCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAT > SRR4302540.6166153/1‑94 (MQ=60)
CCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAT < SRR4302540.6283463/94‑1 (MQ=60)
CCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAT > SRR4302540.5758526/1‑94 (MQ=60)
CCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAT > SRR4302540.9310137/1‑94 (MQ=60)
ATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAG > SRR4302540.5745272/1‑94 (MQ=60)
ATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAG > SRR4302540.5745527/1‑94 (MQ=60)
ATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAG < SRR4302540.9454098/94‑1 (MQ=60)
TAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGC > SRR4302540.1438370/1‑94 (MQ=60)
TAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGC < SRR4302540.4838835/94‑1 (MQ=60)
AATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGG < SRR4302540.6257010/94‑1 (MQ=60)
ATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGT > SRR4302540.6957568/1‑94 (MQ=60)
TCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTA > SRR4302540.9453858/1‑94 (MQ=60)
CCGACGTGTGTGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAA < SRR4302540.8901739/94‑1 (MQ=60)
CCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAA > SRR4302540.3507340/1‑94 (MQ=60)
CGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAA < SRR4302540.3088951/94‑1 (MQ=60)
ACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACA > SRR4302540.761364/1‑94 (MQ=60)
CGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG > SRR4302540.200473/1‑94 (MQ=60)
CGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG > SRR4302540.1552755/1‑94 (MQ=60)
GTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGC > SRR4302540.8867357/1‑94 (MQ=60)
GTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGC > SRR4302540.6112969/1‑94 (MQ=60)
GTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGCAC > SRR4302540.3474521/1‑94 (MQ=60)
GTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGCAC < SRR4302540.6913192/94‑1 (MQ=60)
GTGGGTAAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACGGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGCAC < SRR4302540.8297227/94‑1 (MQ=60)
TGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGCTTGCCGTAGCTGATAGCGGTAAACAGCACA > SRR4302540.4115565/1‑94 (MQ=60)
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GCGGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAGCACA > NC_000913/1356832‑1357017
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
