Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,389,803 A→G P29P (CCT→CCC)  b1327 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,389,8030AG100.0% 1142.0 / NA 350P29P (CCT→CCC) b1327hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (190/160);  total (190/160)

Only 100 of 368 total aligned reads displayed.

GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGG  >  NC_000913/1389713‑1389891
                                                                                            |                                                                                        
ggCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑Ggggg                                                                                        >  1:5148243/1‑93 (MQ=255)
ggCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑Ggggg                                                                                        >  2:1448832/1‑93 (MQ=255)
 gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑gggggg                                                                                       <  1:5466708/93‑1 (MQ=255)
   aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑ggggggga                                                                                     <  2:9133534/93‑3 (MQ=255)
    tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGgaa                                                                                    >  2:1314350/1‑93 (MQ=255)
    tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGaaa                                                                                    >  1:949223/1‑93 (MQ=255)
    tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGaaa                                                                                    >  2:3033747/1‑93 (MQ=255)
    tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGaaa                                                                                    <  2:1694887/93‑1 (MQ=255)
      ggTTCCGGCCGTCTGTTCTTTTACGTCCCCACCTGGGTGAGATAACACAATTGCCTTATTCTGACGGGTTTCATCAAATTTT‑‑TGGGGGAAATa                                                                                  >  2:8969697/1‑93 (MQ=255)
       gTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAg                                                                                 >  1:5836749/1‑93 (MQ=255)
        ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGa                                                                                >  2:9710844/1‑93 (MQ=255)
        ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGCTTCATCAAATTTT‑‑GGGGGGAAATAGa                                                                                >  1:8454851/1‑93 (MQ=255)
         tCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGAt                                                                               >  1:8284693/1‑93 (MQ=255)
          ccGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATc                                                                              >  2:4435899/1‑93 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             <  2:5306667/93‑1 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             <  1:4100042/93‑1 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             <  2:5114911/93‑1 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             >  1:9719656/1‑93 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             <  2:2535894/93‑1 (MQ=255)
           cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCa                                                                             <  2:6677160/93‑1 (MQ=255)
            ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCAc                                                                            >  2:1037025/1‑93 (MQ=255)
             gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACt                                                                           <  2:1781305/93‑1 (MQ=255)
             gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACt                                                                           >  1:6344281/1‑93 (MQ=255)
              ccGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTg                                                                          >  1:8037259/1‑93 (MQ=255)
               cGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGc                                                                         <  1:5937807/93‑1 (MQ=255)
                gTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCa                                                                        >  2:9286762/1‑93 (MQ=255)
                 tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAg                                                                       >  2:405129/1‑93 (MQ=255)
                  ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGa                                                                      >  2:3499918/1‑93 (MQ=255)
                   tGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGAc                                                                     >  2:2928787/1‑93 (MQ=255)
                   tGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGAc                                                                     <  1:3762760/93‑1 (MQ=255)
                     ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACa                                                                    >  1:3712984/1‑93 (MQ=255)
                     ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACaa                                                                   >  2:8499650/1‑93 (MQ=255)
                     ttCTTTAACGCCCCCACCTGGGGGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATCGATAACTGCCGACaa                                                                   >  1:1604422/1‑93 (MQ=255)
                      tCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACaaa                                                                  <  1:4336415/93‑1 (MQ=255)
                        tttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAaga                                                                <  2:7043708/93‑1 (MQ=255)
                         ttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAagag                                                               >  1:2617944/1‑93 (MQ=255)
                         ttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAagag                                                               <  2:7780847/93‑1 (MQ=255)
                          tAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAgaga                                                              >  2:3350282/1‑93 (MQ=255)
                          tAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAgaga                                                              <  1:7232896/93‑1 (MQ=255)
                           aaCGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGAt                                                             >  1:6533967/1‑93 (MQ=255)
                            aCGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATg                                                            >  1:2980883/1‑93 (MQ=255)
                            aCGCCCCCACCTGGGTGAGATAACACAATTACCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATg                                                            >  1:7603948/1‑93 (MQ=255)
                             cGCCCCCACCTGGGTGAGGTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATgg                                                           <  1:1336104/93‑1 (MQ=255)
                               cccccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGtt                                                         >  1:995232/1‑93 (MQ=255)
                                 cccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg                                                       >  2:2301866/1‑93 (MQ=255)
                                 cccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg                                                       >  1:6904071/1‑93 (MQ=255)
                                  ccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa                                                      >  1:8153640/1‑93 (MQ=255)
                                  ccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGATTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa                                                      >  2:7951822/1‑93 (MQ=255)
                                    aCCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGat                                                     >  1:6789606/1‑93 (MQ=255)
                                    aCCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatt                                                    >  2:5843495/1‑93 (MQ=255)
                                     cgtGGGTGAGATAACACAATTGCCTGATACGGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta                                                   <  2:67394/91‑1 (MQ=255)
                                     ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta                                                   <  2:7355742/93‑1 (MQ=255)
                                     ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta                                                   >  1:8513072/1‑93 (MQ=255)
                                     ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATACATCACTGCAGCCAAAGAGATGGTTGGatta                                                   >  1:2034478/1‑93 (MQ=255)
                                      cTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta                                                   <  2:6607338/93‑1 (MQ=255)
                                      cTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat                                                  <  1:7783707/93‑1 (MQ=255)
                                       tGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattatt                                                 >  2:7674435/1‑93 (MQ=255)
                                       tGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattatt                                                 >  1:1808531/1‑93 (MQ=255)
                                        gggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg                                                >  2:6520209/1‑93 (MQ=255)
                                         ggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc                                               <  2:7487601/93‑1 (MQ=255)
                                           tGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTg                                             >  1:1129877/1‑93 (MQ=255)
                                            gagaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt                                            >  2:8636725/1‑93 (MQ=255)
                                            gagaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt                                            >  2:4852857/1‑93 (MQ=255)
                                             agaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt                                            <  2:3179494/93‑1 (MQ=255)
                                              gaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTa                                          >  2:982978/1‑93 (MQ=255)
                                              gaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTa                                          <  2:9041983/93‑1 (MQ=255)
                                              gaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTa                                          <  1:2153397/93‑1 (MQ=255)
                                               aTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAg                                         <  2:708722/93‑1 (MQ=255)
                                                tAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt                                        <  2:313383/93‑1 (MQ=255)
                                                tAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt                                        <  1:1471036/93‑1 (MQ=255)
                                                tAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt                                        >  2:4639812/1‑93 (MQ=255)
                                                 aaCACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTg                                       >  1:8769275/1‑93 (MQ=255)
                                                  acacAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGa                                      <  1:9872418/93‑1 (MQ=255)
                                                   cacaATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGaa                                     <  2:3867690/93‑1 (MQ=255)
                                                   cacaATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGaa                                     <  1:3446679/93‑1 (MQ=255)
                                                      aaTTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCt                                  <  1:9057016/93‑1 (MQ=255)
                                                           ccTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACtt                             <  2:8192569/93‑1 (MQ=255)
                                                            cTGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAAATGGTTGGATTATTGCTGTTAGTGAAGCTGACttt                            >  1:4953858/1‑93 (MQ=255)
                                                             tGATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTtta                           >  1:5365050/1‑93 (MQ=255)
                                                              gATACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttat                          <  2:6045822/93‑1 (MQ=255)
                                                               aTACTGACGGGTTTCATCAAATTCT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatt                         <  2:5584238/93‑1 (MQ=255)
                                                                tACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta                        >  1:616979/1‑93 (MQ=255)
                                                                tACTGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta                        <  1:9126196/93‑1 (MQ=255)
                                                                   tGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtc                     <  2:9540142/93‑1 (MQ=255)
                                                                   tGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtc                     <  1:2669937/93‑1 (MQ=255)
                                                                   tGACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGATAGTGAAGCTGACTTTATTATtc                     >  2:7220422/1‑93 (MQ=255)
                                                                    gACGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca                    >  1:4042474/1‑93 (MQ=255)
                                                                     gcGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat                   <  1:1019790/92‑1 (MQ=255)
                                                                     aCGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat                   >  2:716044/1‑93 (MQ=255)
                                                                      cGGGTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat                   >  2:6332463/1‑93 (MQ=255)
                                                                      cGGGTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatc                  <  2:6880261/93‑1 (MQ=255)
                                                                        ggTTTCATCAAATTTTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca                 <  1:5727603/93‑1 (MQ=255)
                                                                        ggTTTCATCAAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat                <  1:4548047/93‑1 (MQ=255)
                                                                            tcatcaAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg            <  1:787137/93‑1 (MQ=255)
                                                                             catcaAATTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt           <  1:4774166/93‑1 (MQ=255)
                                                                               tcaAATTTTGGGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt           <  1:1890559/93‑1 (MQ=255)
                                                                                 aaaTTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCt       >  1:4606510/1‑93 (MQ=255)
                                                                                   aTTTT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa     <  2:1917906/93‑1 (MQ=255)
                                                                                    tttt‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCAt    >  2:3750817/1‑93 (MQ=255)
                                                                                     ttt‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTGATCATTCCGTTCCTCATg   <  2:4262066/93‑1 (MQ=255)
                                                                                            |                                                                                        
GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTT‑‑GGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGG  >  NC_000913/1389713‑1389891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGT  >  NC_000913/1389710‑1389894
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TTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGG                                                                                             >  SRR4302540.7502236/1‑94 (MQ=60)
 TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGG                                                                                            <  SRR4302540.2370652/94‑1 (MQ=60)
 TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGG                                                                                            <  SRR4302540.5216310/94‑1 (MQ=60)
  TGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGG                                                                                           >  SRR4302540.5204040/1‑94 (MQ=60)
  TGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGG                                                                                           >  SRR4302540.1428842/1‑94 (MQ=60)
  TGGCATAGGCTCCGGCCGTTTGTTCTTTAACCCCCCCACCTGGGAGAGATAACACAATTGCCTGATACTGACGGATTTCATCAAATT‑TT‑‑GGGGG                                                                                           <  SRR4302540.8378562/94‑1 (MQ=60)
   GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGG                                                                                          >  SRR4302540.6180940/1‑94 (MQ=60)
   GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGG                                                                                          >  SRR4302540.5891046/1‑94 (MQ=60)
   GGCATAGGTTCCGGCCGTTTGTTCATTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGG                                                                                          <  SRR4302540.9064305/94‑1 (MQ=60)
   GGCAGAGGTTCCGGGCGTTTCTTCTTTAACGGTCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGG                                                                                          <  SRR4302540.5031762/94‑1 (MQ=60)
    GCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGA                                                                                         >  SRR4302540.188714/1‑94 (MQ=60)
    GCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGA                                                                                         >  SRR4302540.3984752/1‑94 (MQ=60)
    GCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGA                                                                                         <  SRR4302540.5526882/94‑1 (MQ=60)
     CATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAA                                                                                        <  SRR4302540.8206785/94‑1 (MQ=60)
     CATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAA                                                                                        <  SRR4302540.10024156/94‑1 (MQ=60)
     CATAGATTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAA                                                                                        >  SRR4302540.1566592/1‑94 (MQ=60)
      ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAA                                                                                       >  SRR4302540.5314842/1‑94 (MQ=60)
      ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAA                                                                                       >  SRR4302540.1101343/1‑94 (MQ=60)
      ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAA                                                                                       >  SRR4302540.9166075/1‑94 (MQ=60)
      ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAA                                                                                       >  SRR4302540.959099/1‑94 (MQ=60)
      ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACAGGTTTCATCAAATT‑TT‑‑GGGGGGAAA                                                                                       >  SRR4302540.9166077/1‑94 (MQ=60)
       TAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAAT                                                                                      >  SRR4302540.5510926/1‑94 (MQ=60)
       TAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAAT                                                                                      >  SRR4302540.5510925/1‑94 (MQ=60)
        AGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATA                                                                                     >  SRR4302540.2119804/1‑94 (MQ=60)
        AGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATA                                                                                     <  SRR4302540.7895694/94‑1 (MQ=60)
         GGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAG                                                                                    >  SRR4302540.8656938/1‑94 (MQ=60)
         GGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAG                                                                                    >  SRR4302540.5901282/1‑94 (MQ=60)
          GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAG                                                                                    >  SRR4302540.6348764/1‑94 (MQ=60)
          GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGA                                                                                   <  SRR4302540.2267926/94‑1 (MQ=60)
          GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGA                                                                                   >  SRR4302540.8063704/1‑94 (MQ=60)
          GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGCTTCATCAAATT‑TT‑‑GGGGGGAAATAGA                                                                                   >  SRR4302540.8553026/1‑94 (MQ=60)
           TTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGAT                                                                                  >  SRR4302540.8380919/1‑94 (MQ=60)
             CCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCA                                                                                >  SRR4302540.9833847/1‑94 (MQ=60)
              CGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCAC                                                                               >  SRR4302540.5212364/1‑94 (MQ=60)
              CGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCAC                                                                               <  SRR4302540.4144272/94‑1 (MQ=60)
               GGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACT                                                                              >  SRR4302540.6414928/1‑94 (MQ=60)
               GGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACT                                                                              <  SRR4302540.1270603/94‑1 (MQ=60)
                GCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTG                                                                             >  SRR4302540.424660/1‑94 (MQ=60)
                GCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTG                                                                             >  SRR4302540.8130668/1‑94 (MQ=60)
                 CCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGC                                                                            <  SRR4302540.7729645/94‑1 (MQ=60)
                  CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGC                                                                            >  SRR4302540.4140207/1‑94 (MQ=60)
                  CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCA                                                                           <  SRR4302540.6003445/94‑1 (MQ=60)
                  CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCA                                                                           >  SRR4302540.6279910/1‑94 (MQ=60)
                  CGTGTGTCCTTGAACGCCCCCACCTGGGTGACATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCA                                                                           <  SRR4302540.6003446/94‑1 (MQ=60)
                   GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACACTTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTccac                                                                          >  SRR4302540.6446625/1‑90 (MQ=60)
                   GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAG                                                                          >  SRR4302540.7473561/1‑94 (MQ=60)
                   GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAG                                                                          >  SRR4302540.5937473/1‑94 (MQ=60)
                   CTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCA                                                                           <  SRR4302540.1008287/94‑1 (MQ=60)
                      TGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACA                                                                       <  SRR4302540.3803808/94‑1 (MQ=60)
                      TGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACA                                                                       >  SRR4302540.4316217/1‑94 (MQ=60)
                       GTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACA                                                                       >  SRR4302540.3753503/1‑94 (MQ=60)
                       GTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAA                                                                      >  SRR4302540.5757298/1‑94 (MQ=60)
                       GTTCTTTAACGCCCCCACCTGGGGGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATCGATAACTGCCGACAA                                                                      >  SRR4302540.1621976/1‑94 (MQ=60)
                         TCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAG                                                                    <  SRR4302540.4383622/94‑1 (MQ=60)
                         TCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAG                                                                    >  SRR4302540.4965206/1‑94 (MQ=60)
                         TCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAG                                                                    <  SRR4302540.1904610/94‑1 (MQ=60)
                         TCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAG                                                                    >  SRR4302540.4965207/1‑94 (MQ=60)
                         TCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAG                                                                    <  SRR4302540.2211662/94‑1 (MQ=60)
                           TTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGA                                                                   <  SRR4302540.9965987/94‑1 (MQ=60)
                           TTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAG                                                                  >  SRR4302540.2646238/1‑94 (MQ=60)
                           TTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAG                                                                  <  SRR4302540.3987090/94‑1 (MQ=60)
                             TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGAT                                                                <  SRR4302540.7313565/94‑1 (MQ=60)
                             TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGAT                                                                >  SRR4302540.6606496/1‑94 (MQ=60)
                             TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGAT                                                                <  SRR4302540.8876606/94‑1 (MQ=60)
                             TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGAT                                                                <  SRR4302540.9284474/94‑1 (MQ=60)
                              TACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATG                                                               <  SRR4302540.2836420/94‑1 (MQ=60)
                              AACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATG                                                               >  SRR4302540.3013800/1‑94 (MQ=60)
                              AACGCCCCCACCTGGGTGAGATAACACAATTACCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATG                                                               >  SRR4302540.7689392/1‑94 (MQ=60)
                               ACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGG                                                              <  SRR4302540.8726914/94‑1 (MQ=60)
                                CGCCCCCACCTGGGTGAGGTAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGT                                                             <  SRR4302540.1350092/94‑1 (MQ=60)
                                CGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGT                                                             <  SRR4302540.1350410/94‑1 (MQ=60)
                                CGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGT                                                             <  SRR4302540.2652778/94‑1 (MQ=60)
                                 GCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTT                                                            >  SRR4302540.3943697/1‑94 (MQ=60)
                                 GCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTT                                                            >  SRR4302540.6661541/1‑94 (MQ=60)
                                 GCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTT                                                            >  SRR4302540.1005366/1‑94 (MQ=60)
                                 GCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTT                                                            >  SRR4302540.5173222/1‑94 (MQ=60)
                                  CCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTG                                                           <  SRR4302540.847357/94‑1 (MQ=60)
                                  CCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTG                                                           <  SRR4302540.6886326/94‑1 (MQ=60)
                                   CCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGG                                                          <  SRR4302540.5806644/94‑1 (MQ=60)
                                   CCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGG                                                          >  SRR4302540.6980819/1‑94 (MQ=60)
                                    CCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGA                                                         >  SRR4302540.8248306/1‑94 (MQ=60)
                                     CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT                                                        <  SRR4302540.4488722/94‑1 (MQ=60)
                                     CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT                                                        <  SRR4302540.2662770/94‑1 (MQ=60)
                                     CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT                                                        <  SRR4302540.4137827/94‑1 (MQ=60)
                                      CACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT                                                        >  SRR4302540.6864690/1‑94 (MQ=60)
                                      CACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATT                                                       >  SRR4302540.8350893/1‑94 (MQ=60)
                                       ACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTA                                                      >  SRR4302540.8612008/1‑94 (MQ=60)
                                       ACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATACATCACTGCAGCCAAAGAGATGGTTGGATTA                                                      >  SRR4302540.2056418/1‑94 (MQ=60)
                                        CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT                                                     >  SRR4302540.7071296/1‑94 (MQ=60)
                                        CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT                                                     >  SRR4302540.9975904/1‑94 (MQ=60)
                                        CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT                                                     >  SRR4302540.571655/1‑94 (MQ=60)
                                         CTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATT                                                    >  SRR4302540.1828236/1‑94 (MQ=60)
                                         CTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATT                                                    <  SRR4302540.2086699/94‑1 (MQ=60)
                                         CTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATT                                                    >  SRR4302540.3196450/1‑94 (MQ=60)
                                         CTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATT                                                    <  SRR4302540.7874685/94‑1 (MQ=60)
                                          TGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTG                                                   <  SRR4302540.6415431/94‑1 (MQ=60)
                                           GGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGC                                                  <  SRR4302540.816152/94‑1 (MQ=60)
                                            GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT                                                 >  SRR4302540.9332569/1‑94 (MQ=60)
                                            GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT                                                 <  SRR4302540.1119261/94‑1 (MQ=60)
                                            GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT                                                 <  SRR4302540.1831761/94‑1 (MQ=60)
                                            GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT                                                 >  SRR4302540.4388358/1‑94 (MQ=60)
                                             GTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTG                                                >  SRR4302540.1141631/1‑94 (MQ=60)
                                             GTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTG                                                <  SRR4302540.6935999/94‑1 (MQ=60)
                                             GTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTG                                                >  SRR4302540.1141632/1‑94 (MQ=60)
                                              TGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGT                                               >  SRR4302540.4740260/1‑94 (MQ=60)
                                              TGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGT                                               <  SRR4302540.8010941/94‑1 (MQ=60)
                                                 GATAACACGATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAG                                            >  SRR4302540.216177/1‑94 (MQ=60)
                                                 GATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAG                                            <  SRR4302540.4243699/94‑1 (MQ=60)
                                                 GATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAG                                            <  SRR4302540.2176564/94‑1 (MQ=60)
                                                 GATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAG                                            <  SRR4302540.7232472/94‑1 (MQ=60)
                                                  ATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGT                                           >  SRR4302540.6781576/1‑94 (MQ=60)
                                                  ATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGT                                           >  SRR4302540.5722375/1‑94 (MQ=60)
                                                   TAACACAATTTCCTTGTACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTG                                          <  SRR4302540.1487118/94‑1 (MQ=60)
                                                   TAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTG                                          <  SRR4302540.1487119/94‑1 (MQ=60)
                                                   TAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTG                                          >  SRR4302540.802028/1‑94 (MQ=60)
                                                   TAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTG                                          >  SRR4302540.8870909/1‑94 (MQ=60)
                                                     ACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGA                                         >  SRR4302540.9620265/1‑94 (MQ=60)
                                                     ACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAA                                        <  SRR4302540.9987715/94‑1 (MQ=60)
                                                     ACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAA                                        >  SRR4302540.3332788/1‑94 (MQ=60)
                                                     ACACAATGGCCTGATACTGACTGTTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAA                                        <  SRR4302540.2484966/94‑1 (MQ=60)
                                                      CACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAG                                       <  SRR4302540.3484169/94‑1 (MQ=60)
                                                        CAATTGCCTGATACTGACGGGTTTCATCCAATT‑TT‑‑GGGGGGAAATAGATCACTGACGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGag                                     >  SRR4302540.9740635/1‑92 (MQ=60)
                                                        CAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCT                                     <  SRR4302540.1342709/94‑1 (MQ=60)
                                                        CAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCT                                     <  SRR4302540.794743/94‑1 (MQ=60)
                                                         AATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG                                    >  SRR4302540.4716631/1‑94 (MQ=60)
                                                         AATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG                                    <  SRR4302540.9165747/94‑1 (MQ=60)
                                                         AATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG                                    >  SRR4302540.4716636/1‑94 (MQ=60)
                                                          ATTGCCTGATACTGACGGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG                                    <  SRR4302540.3666361/94‑1 (MQ=60)
                                                          ATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGA                                   >  SRR4302540.825162/1‑94 (MQ=60)
                                                            TGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACT                                 >  SRR4302540.3759230/1‑94 (MQ=60)
                                                            TGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACT                                 >  SRR4302540.3759231/1‑94 (MQ=60)
                                                             GCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTT                                >  SRR4302540.8305760/1‑94 (MQ=60)
                                                              CCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT                               >  SRR4302540.1655442/1‑94 (MQ=60)
                                                              CCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT                               >  SRR4302540.1002567/1‑94 (MQ=60)
                                                              CCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT                               >  SRR4302540.7611732/1‑94 (MQ=60)
                                                              CCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAAATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT                               >  SRR4302540.5007383/1‑94 (MQ=60)
                                                               CTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTA                              >  SRR4302540.4529758/1‑94 (MQ=60)
                                                               CTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTA                              >  SRR4302540.5423985/1‑94 (MQ=60)
                                                               CTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTA                              >  SRR4302540.1533058/1‑94 (MQ=60)
                                                               CTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTA                              >  SRR4302540.8923412/1‑94 (MQ=60)
                                                                TGATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTAT                             <  SRR4302540.8606928/94‑1 (MQ=60)
                                                                  ATACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTA                           >  SRR4302540.623558/1‑94 (MQ=60)
                                                                   TACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTAT                          <  SRR4302540.3081245/94‑1 (MQ=60)
                                                                   TACTGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTAT                          <  SRR4302540.9235896/94‑1 (MQ=60)
                                                                      TGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA                       >  SRR4302540.5500713/1‑94 (MQ=60)
                                                                      TGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA                       >  SRR4302540.4086050/1‑94 (MQ=60)
                                                                      TGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA                       <  SRR4302540.2698859/94‑1 (MQ=60)
                                                                      TGACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA                       >  SRR4302540.1947530/1‑94 (MQ=60)
                                                                       GACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCAT                      >  SRR4302540.173606/1‑94 (MQ=60)
                                                                       GACGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCAT                      >  SRR4302540.10003130/1‑94 (MQ=60)
                                                                        GCGGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATC                     <  SRR4302540.1030142/94‑1 (MQ=60)
                                                                        ACGGGTTTCATCAAATT‑TTGGGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA                       <  SRR4302540.3571074/94‑1 (MQ=60)
                                                                         CGGGTTTCATCAAATT‑TTGGGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCAT                      <  SRR4302540.3803124/94‑1 (MQ=60)
                                                                          GGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCA                    >  SRR4302540.2913245/1‑94 (MQ=60)
                                                                          GGGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCA                    >  SRR4302540.8591100/1‑94 (MQ=60)
                                                                          GGGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAT                   <  SRR4302540.4609181/94‑1 (MQ=60)
                                                                           GGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAT                   <  SRR4302540.5790677/94‑1 (MQ=60)
                                                                           GGTTTCATCAAATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAT                   <  SRR4302540.84305/94‑1 (MQ=60)
                                                                           GGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT                  <  SRR4302540.4597246/94‑1 (MQ=60)
                                                                           GGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT                  <  SRR4302540.9448944/94‑1 (MQ=60)
                                                                           GGTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT                  <  SRR4302540.1704852/94‑1 (MQ=60)
                                                                            GTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCCTCATGC                 >  SRR4302540.8479864/1‑94 (MQ=60)
                                                                            GTTTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTC                 <  SRR4302540.6042143/94‑1 (MQ=60)
                                                                              TTCATCAAATTGTG‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCC                <  SRR4302540.2749651/94‑1 (MQ=60)
                                                                              TTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCG               >  SRR4302540.7937994/1‑94 (MQ=60)
                                                                              TTCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCG               <  SRR4302540.8433274/94‑1 (MQ=60)
                                                                               TCATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGT              <  SRR4302540.795508/94‑1 (MQ=60)
                                                                                CATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT             <  SRR4302540.4825167/94‑1 (MQ=60)
                                                                                CATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT             >  SRR4302540.9796647/1‑94 (MQ=60)
                                                                                CATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT             <  SRR4302540.4825168/94‑1 (MQ=60)
                                                                                CATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT             >  SRR4302540.7087594/1‑94 (MQ=60)
                                                                                 ATCAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTC            <  SRR4302540.1921493/94‑1 (MQ=60)
                                                                                 ATCAAAGT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTC            <  SRR4302540.5245692/94‑1 (MQ=60)
                                                                                  TCAAATT‑TTGGGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT             <  SRR4302540.1911254/94‑1 (MQ=60)
                                                                                   CAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGCAGCTGACTTTGTTATTCATCATTCCGTTCCT          >  SRR4302540.4655982/1‑94 (MQ=60)
                                                                                   CAAATT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCT          >  SRR4302540.4655983/1‑94 (MQ=60)
                                                                                      ATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTTATCATTCCGTTCCTCT        >  SRR4302540.7371237/1‑94 (MQ=60)
                                                                                      ATT‑TTG‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCA        >  SRR4302540.7370973/1‑94 (MQ=60)
                                                                                       TT‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATG      <  SRR4302540.8649415/94‑1 (MQ=60)
                                                                                        T‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGG     <  SRR4302540.598657/94‑1 (MQ=60)
                                                                                        T‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGG     <  SRR4302540.598656/94‑1 (MQ=60)
                                                                                        T‑TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGG     <  SRR4302540.6659398/94‑1 (MQ=60)
                                                                                          TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGA    <  SRR4302540.6503903/94‑1 (MQ=60)
                                                                                          TT‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTAAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGA    <  SRR4302540.7866766/94‑1 (MQ=60)
                                                                                           T‑‑GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAG   >  SRR4302540.6015622/1‑94 (MQ=60)
                                                                                              GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGT  <  SRR4302540.6665551/94‑1 (MQ=60)
                                                                                              GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGT  <  SRR4302540.8107596/94‑1 (MQ=60)
                                                                                                |                                                                                           
TTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATT‑TT‑‑GGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGT  >  NC_000913/1389710‑1389894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑