Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,389,803 |
A→G |
P29P (CCT→CCC) |
b1327 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,389,803 | 0 | A | G | 100.0%
| 701.3
/ NA
| 215 | P29P (CCT→CCC) | b1327 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/119); total (96/119) |
Only 100 of 219 total aligned reads displayed.
GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGA > NC_000913/1389713‑1389892
|
gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGgggga > 1:4131978/1‑92 (MQ=255)
cATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGa < 1:6208463/93‑1 (MQ=255)
aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGaa < 1:4586749/93‑1 (MQ=255)
tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGaaa > 2:1575453/1‑93 (MQ=255)
aGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAAt < 2:325530/93‑1 (MQ=255)
ggTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATa < 1:4415165/93‑1 (MQ=255)
ggTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATa > 2:4180164/1‑93 (MQ=255)
ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGa < 1:4499585/93‑1 (MQ=255)
ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGa > 1:3180975/1‑93 (MQ=255)
cGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCa < 2:4812244/93‑1 (MQ=255)
gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACt > 2:3713531/1‑93 (MQ=255)
gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACt > 1:5586443/1‑93 (MQ=255)
gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACt > 2:4243783/1‑93 (MQ=255)
ccGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTg > 1:1011323/1‑93 (MQ=255)
ccGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGAGACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTg < 1:3392125/93‑1 (MQ=255)
cGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGc < 2:5447725/93‑1 (MQ=255)
gTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCa > 2:5082585/1‑93 (MQ=255)
tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAg > 1:3292918/1‑93 (MQ=255)
tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAg > 1:5020444/1‑93 (MQ=255)
tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAg > 1:250278/1‑93 (MQ=255)
tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAg > 1:677564/1‑93 (MQ=255)
ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGa < 2:3169977/93‑1 (MQ=255)
ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGa < 1:1345941/93‑1 (MQ=255)
tttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACa < 2:1158757/92‑1 (MQ=255)
gTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACa < 2:4971834/93‑1 (MQ=255)
tCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACaaa < 2:3004264/93‑1 (MQ=255)
cTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAag < 2:5740820/93‑1 (MQ=255)
tttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAaga > 2:4853779/1‑93 (MQ=255)
ttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAagag < 2:2967815/93‑1 (MQ=255)
tAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAgaga < 2:5545588/93‑1 (MQ=255)
tAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAgaga < 2:851500/93‑1 (MQ=255)
aaCGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGAt < 1:3587531/93‑1 (MQ=255)
cGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATgg > 2:3983912/1‑93 (MQ=255)
cccccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGtt < 2:1234974/93‑1 (MQ=255)
cccccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGtt < 1:3454253/93‑1 (MQ=255)
cccACCTGGGTGAGATAACACAATTGCCTGATACTGACTGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg < 2:4693514/93‑1 (MQ=255)
cccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg > 2:5235259/1‑93 (MQ=255)
ccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa < 1:722758/93‑1 (MQ=255)
ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta < 1:3815883/93‑1 (MQ=255)
ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta > 1:516286/1‑93 (MQ=255)
ccTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta > 1:5501141/1‑93 (MQ=255)
cTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat > 2:958231/1‑93 (MQ=255)
cTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat > 1:6076533/1‑93 (MQ=255)
cTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat > 1:4333031/1‑93 (MQ=255)
gggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAACTTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg < 1:3613043/93‑1 (MQ=255)
gggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg > 2:5041815/1‑93 (MQ=255)
ggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc < 1:613444/93‑1 (MQ=255)
ggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc < 2:3427272/93‑1 (MQ=255)
ggTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc > 2:3079192/1‑93 (MQ=255)
gTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCt < 2:6144021/93‑1 (MQ=255)
gTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCt < 1:3643943/93‑1 (MQ=255)
gagaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt < 1:4706016/93‑1 (MQ=255)
gaTAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTa < 2:3570279/93‑1 (MQ=255)
cacaATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGaa < 1:682524/93‑1 (MQ=255)
caATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAgt > 2:2734962/1‑92 (MQ=255)
caATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGc < 2:731763/93‑1 (MQ=255)
caATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGc < 2:5004124/93‑1 (MQ=255)
caATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGc > 2:1917023/1‑93 (MQ=255)
aaTTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCt < 1:6270214/93‑1 (MQ=255)
aaTTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCt > 1:3792790/1‑93 (MQ=255)
aTTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTg > 1:3419550/1‑93 (MQ=255)
ttGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGa < 1:958231/93‑1 (MQ=255)
tGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAc < 1:5086851/93‑1 (MQ=255)
tGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAc > 1:2768299/1‑93 (MQ=255)
gCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt > 2:2427858/1‑93 (MQ=255)
cTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACttt > 1:2963840/1‑93 (MQ=255)
cTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACttt > 1:2142716/1‑93 (MQ=255)
tGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTtta > 2:1155211/1‑93 (MQ=255)
aTACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatt < 1:2413840/93‑1 (MQ=255)
aTACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatt > 1:1609757/1‑93 (MQ=255)
cTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTattatt > 1:1854056/1‑93 (MQ=255)
cTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTattatt > 2:4581958/1‑93 (MQ=255)
tGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtc > 1:5699597/1‑93 (MQ=255)
tGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtc < 1:2235237/93‑1 (MQ=255)
tGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtc > 1:5481021/1‑93 (MQ=255)
aCGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat > 2:4718596/1‑93 (MQ=255)
aCGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat < 1:4752247/93‑1 (MQ=255)
cgagTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatc < 2:4209802/90‑1 (MQ=255)
ggggTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca > 2:4339339/1‑93 (MQ=255)
gggTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca < 1:2703287/93‑1 (MQ=255)
gggTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca > 1:5802543/1‑93 (MQ=255)
ggTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat < 1:3484114/93‑1 (MQ=255)
ggTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat < 2:3854875/93‑1 (MQ=255)
ggTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTAATcatcat < 2:5983686/93‑1 (MQ=255)
gTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt > 2:563163/1‑93 (MQ=255)
gTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt > 1:147726/1‑93 (MQ=255)
tttCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGATATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 1:2332638/93‑1 (MQ=255)
tttCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 2:1876398/93‑1 (MQ=255)
tttCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 1:6039390/93‑1 (MQ=255)
tttCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 2:4615534/93‑1 (MQ=255)
ttCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTcc < 1:3661949/93‑1 (MQ=255)
tcatcaAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGGAGCTGACTTTATTATTCATCATTCCg > 2:5865434/1‑93 (MQ=255)
tcaAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTc < 1:537611/93‑1 (MQ=255)
caAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTcc < 1:810624/93‑1 (MQ=255)
aaaTTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCt > 2:1097846/1‑93 (MQ=255)
aaaTTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCt < 2:110236/93‑1 (MQ=255)
aTTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa > 1:5810192/1‑93 (MQ=255)
ttttGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCAt < 1:1236891/93‑1 (MQ=255)
tttGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATg < 2:6231287/93‑1 (MQ=255)
tGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGa < 2:2199593/93‑1 (MQ=255)
|
GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGA > NC_000913/1389713‑1389892
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTG > NC_000913/1389711‑1389896
|
TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGG < SRR4302533.2936673/94‑1 (MQ=60)
TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGG < SRR4302533.1793600/94‑1 (MQ=60)
TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGG < SRR4302533.1610902/94‑1 (MQ=60)
TGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGG < SRR4302533.735765/94‑1 (MQ=60)
TGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGGTTCATCAAATTTTGGGGG > SRR4302533.5375474/1‑94 (MQ=60)
GGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGG‑GGGA > SRR4302533.4157063/1‑94 (MQ=60)
CATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAA < SRR4302533.6245702/94‑1 (MQ=60)
ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAA < SRR4302533.4614535/94‑1 (MQ=60)
ATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAA > SRR4302533.4546178/1‑94 (MQ=60)
TAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAAT < SRR4302533.1378214/94‑1 (MQ=60)
TAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAAT < SRR4302533.2142160/94‑1 (MQ=60)
TAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAAT > SRR4302533.3731322/1‑94 (MQ=60)
GGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAG < SRR4302533.2812697/94‑1 (MQ=60)
GGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAG < SRR4302533.4441826/94‑1 (MQ=60)
GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGA > SRR4302533.3200545/1‑94 (MQ=60)
GTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGA > SRR4302533.3680344/1‑94 (MQ=60)
TTCCGGCCGTTTGTTCTTTAACGCCCGCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGAT < SRR4302533.5591035/94‑1 (MQ=60)
TTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGAT < SRR4302533.4526833/94‑1 (MQ=60)
TTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGAT < SRR4302533.473897/94‑1 (MQ=60)
GGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACT > SRR4302533.686186/1‑94 (MQ=60)
GGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACT > SRR4302533.5620198/1‑94 (MQ=60)
GCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTG > SRR4302533.1017240/1‑94 (MQ=60)
CCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGC > SRR4302533.5517400/1‑94 (MQ=60)
CCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGAGACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGC < SRR4302533.3413074/94‑1 (MQ=60)
CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTTCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCA > SRR4302533.3413733/1‑94 (MQ=60)
CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCA > SRR4302533.899588/1‑94 (MQ=60)
CGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCA < SRR4302533.463627/94‑1 (MQ=60)
GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAG > SRR4302533.3658141/1‑94 (MQ=60)
GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAG > SRR4302533.3313244/1‑94 (MQ=60)
GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAG > SRR4302533.251822/1‑94 (MQ=60)
GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAG > SRR4302533.5050850/1‑94 (MQ=60)
GTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAG > SRR4302533.681570/1‑94 (MQ=60)
TTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGAC < SRR4302533.1354041/94‑1 (MQ=60)
TGTTCTTTAACGCCCCCACCTGGGTGGGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACA > SRR4302533.3620733/1‑94 (MQ=60)
TGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACA > SRR4302533.244030/1‑94 (MQ=60)
TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAA > SRR4302533.489407/1‑94 (MQ=60)
TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAA < SRR4302533.266083/94‑1 (MQ=60)
TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAA < SRR4302533.2524734/94‑1 (MQ=60)
TTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAA > SRR4302533.3484887/1‑94 (MQ=60)
CTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGA < SRR4302533.3470535/94‑1 (MQ=60)
TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGAT < SRR4302533.3271786/94‑1 (MQ=60)
TAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGAT < SRR4302533.5124234/94‑1 (MQ=60)
AACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATG < SRR4302533.3609621/94‑1 (MQ=60)
AACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATG < SRR4302533.6180786/94‑1 (MQ=60)
ACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGG < SRR4302533.5838916/94‑1 (MQ=60)
ACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGG < SRR4302533.6306617/94‑1 (MQ=60)
CCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTG > SRR4302533.2061551/1‑94 (MQ=60)
CCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTG > SRR4302533.5437624/1‑94 (MQ=60)
CCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTG < SRR4302533.3475575/94‑1 (MQ=60)
CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT < SRR4302533.1316548/94‑1 (MQ=60)
CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT < SRR4302533.727032/94‑1 (MQ=60)
CCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGAT > SRR4302533.2293587/1‑94 (MQ=60)
ACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTA > SRR4302533.519350/1‑94 (MQ=60)
ACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTA > SRR4302533.5534327/1‑94 (MQ=60)
CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT > SRR4302533.4359138/1‑94 (MQ=60)
CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT < SRR4302533.3839215/94‑1 (MQ=60)
CCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTAT > SRR4302533.6113285/1‑94 (MQ=60)
GGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAACTTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGC < SRR4302533.3635278/94‑1 (MQ=60)
GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT < SRR4302533.2770447/94‑1 (MQ=60)
GGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCT < SRR4302533.617049/94‑1 (MQ=60)
GTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTG < SRR4302533.3666348/94‑1 (MQ=60)
GAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTT < SRR4302533.4734535/94‑1 (MQ=60)
GAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTT > SRR4302533.73283/1‑94 (MQ=60)
AGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTA < SRR4302533.5825260/94‑1 (MQ=60)
AGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTA > SRR4302533.5726211/1‑94 (MQ=60)
AGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTA > SRR4302533.3567392/1‑94 (MQ=60)
ATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGT < SRR4302533.6012491/94‑1 (MQ=60)
CACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAG < SRR4302533.686561/94‑1 (MQ=60)
CACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAG < SRR4302533.5960997/94‑1 (MQ=60)
AACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAG < SRR4302533.4426773/94‑1 (MQ=60)
ACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGC > SRR4302533.662830/1‑94 (MQ=60)
CAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCT > SRR4302533.3816006/1‑94 (MQ=60)
CAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCT > SRR4302533.1496445/1‑94 (MQ=60)
AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG > SRR4302533.3440678/1‑94 (MQ=60)
AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG > SRR4302533.3356447/1‑94 (MQ=60)
AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTG < SRR4302533.6307674/94‑1 (MQ=60)
ATTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGA > SRR4302533.1760633/1‑94 (MQ=60)
TTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAC > SRR4302533.2785283/1‑94 (MQ=60)
TTGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAC < SRR4302533.963865/94‑1 (MQ=60)
TCGCCTGATGCTGACGAGTTTCATAAAATTTTGGGGGCAAATAGATCACTGCAGACAAAGAGATGTTTAGATTATTGCTGTTAGTGAAGCTGAC < SRR4302533.3655252/94‑1 (MQ=60)
TGCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACT < SRR4302533.5117588/94‑1 (MQ=60)
GCCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTT < SRR4302533.5474898/94‑1 (MQ=60)
CCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT > SRR4302533.2981959/1‑94 (MQ=60)
CCTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTT > SRR4302533.2155918/1‑94 (MQ=60)
CTGATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTA > SRR4302533.5076464/1‑94 (MQ=60)
TGATACTGACGGGATTCATCAAATTTTGGGGGGCAATAGATCACTGCAGACAAAGCGATGGTTGGATTATTGCTGTTAGTGCAGCTGACTTTAT > SRR4302533.1963339/1‑94 (MQ=60)
GATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATT < SRR4302533.403786/94‑1 (MQ=60)
GATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATT > SRR4302533.1619518/1‑94 (MQ=60)
ATACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTA < SRR4302533.2428752/94‑1 (MQ=60)
ATACTGACGGGTTTCATCAAATTTTGGGGCGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTA < SRR4302533.3080023/94‑1 (MQ=60)
ACTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATT > SRR4302533.1865360/1‑94 (MQ=60)
CTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTC > SRR4302533.5514065/1‑94 (MQ=60)
CTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTC > SRR4302533.5734017/1‑94 (MQ=60)
CTGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTC > SRR4302533.657036/1‑94 (MQ=60)
TGACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCA < SRR4302533.2249029/94‑1 (MQ=60)
ACGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATC < SRR4302533.4781059/94‑1 (MQ=60)
CGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCA > SRR4302533.4174435/1‑94 (MQ=60)
CGGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCA > SRR4302533.5837593/1‑94 (MQ=60)
GGGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAT < SRR4302533.2719867/94‑1 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGTTCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT < SRR4302533.6096059/94‑1 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT > SRR4302533.691824/1‑94 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT > SRR4302533.3329349/1‑94 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT < SRR4302533.3505602/94‑1 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT < SRR4302533.445061/94‑1 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT > SRR4302533.4760661/1‑94 (MQ=60)
GGTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATT > SRR4302533.148672/1‑94 (MQ=60)
GTTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTC < SRR4302533.6116226/94‑1 (MQ=60)
TTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGATATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCC < SRR4302533.2347080/94‑1 (MQ=60)
TTTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCC < SRR4302533.6075987/94‑1 (MQ=60)
TTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCG < SRR4302533.1148548/94‑1 (MQ=60)
TTCATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCG < SRR4302533.3684463/94‑1 (MQ=60)
CATCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTT < SRR4302533.3827589/94‑1 (MQ=60)
TCAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCC < SRR4302533.540809/94‑1 (MQ=60)
CAAATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCT < SRR4302533.815378/94‑1 (MQ=60)
AATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGGCTTTATTATTCATCATTCCGTTCCTCA < SRR4302533.2235490/94‑1 (MQ=60)
AATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCA > SRR4302533.5845279/1‑94 (MQ=60)
ATTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCAT < SRR4302533.2393157/94‑1 (MQ=60)
TTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATG < SRR4302533.4316496/94‑1 (MQ=60)
TTTTGGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATG < SRR4302533.1244282/94‑1 (MQ=60)
GGGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGT > SRR4302533.342754/1‑94 (MQ=60)
GGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTT < SRR4302533.4568559/94‑1 (MQ=60)
GGGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTT < SRR4302533.5415604/94‑1 (MQ=60)
GGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTG > SRR4302533.2336986/1‑94 (MQ=60)
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TTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTG > NC_000913/1389711‑1389896
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
