Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,439,984	T→C	H295R (CAC→CGC)	ldhA ←	fermentative D‑lactate dehydrogenase, NAD‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,439,984	0	T	C	100.0%	1015.2 / NA	315	H295R (CAC→CGC)	ldhA	fermentative D‑lactate dehydrogenase, NAD‑dependent
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/153); total (162/153)

Only 100 of 329 total aligned reads displayed.

GGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGA  >  NC_000913/1439894‑1440073

gggCAGGTTTCGCCTTTTTCCTGATTGCTTAAGTGTTGCAGCGTAGTCTGTGAAATATTGGTCTGAGCTTCTGCCTTCAGGTATGCCTGgcgc                                                                                         >  1:8969540/1‑93 (MQ=255)

 ggCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGcc                                                                                        >  2:433177/1‑93 (MQ=255)

 ggCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGcc                                                                                        >  1:4115665/1‑93 (MQ=255)

   cAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCg                                                                                      <  2:102242/93‑1 (MQ=255)

   cAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCg                                                                                      >  1:7455706/1‑93 (MQ=255)

    aGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCgg                                                                                     >  1:6378468/1‑93 (MQ=255)

     ggTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCATGAATGCCTGGCGCCCGGt                                                                                    >  2:2944703/1‑93 (MQ=255)

     ggTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGt                                                                                    >  1:763122/1‑93 (MQ=255)

      gTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTa                                                                                   >  2:9913656/1‑93 (MQ=255)

       tttCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTaa                                                                                  <  2:9737883/93‑1 (MQ=255)

       tttCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGCCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTaa                                                                                  >  1:159722/1‑93 (MQ=255)

         tCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAAc                                                                                <  2:9394168/93‑1 (MQ=255)

         tCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAAc                                                                                <  2:1474686/93‑1 (MQ=255)

           gCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAg                                                                              <  1:944689/93‑1 (MQ=255)

           gCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAg                                                                              >  1:1245007/1‑93 (MQ=255)

            ccTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGc                                                                             <  2:7878307/93‑1 (MQ=255)

            ccTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGc                                                                             >  1:6835528/1‑93 (MQ=255)

             cTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCa                                                                            >  1:1911279/1‑93 (MQ=255)

             cTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCa                                                                            >  1:4443440/1‑93 (MQ=255)

             cTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCa                                                                            <  1:6875077/93‑1 (MQ=255)

              tttttCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAc                                                                           >  2:5463470/1‑93 (MQ=255)

              tttttCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAc                                                                           >  2:7277165/1‑93 (MQ=255)

               ttttCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACg                                                                          <  1:2803924/93‑1 (MQ=255)

                   ccAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTtgt                                                                      >  2:1305282/1‑93 (MQ=255)

                   ccAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTtgt                                                                      <  2:4894416/93‑1 (MQ=255)

                    cAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTtgtg                                                                     >  1:260351/1‑93 (MQ=255)

                     aGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTgg                                                                    <  2:5741786/93‑1 (MQ=255)

                      gATTGCTTAAGTTTTGCAGCGTACTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggc                                                                   <  1:5751384/93‑1 (MQ=255)

                       aTTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggca                                                                  <  1:6553100/93‑1 (MQ=255)

                       aTTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggca                                                                  <  2:3653134/93‑1 (MQ=255)

                       aTTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggca                                                                  <  2:7630737/93‑1 (MQ=255)

                        ttGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggcag                                                                 <  1:4047362/93‑1 (MQ=255)

                         tGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggcagg                                                                <  1:8522353/93‑1 (MQ=255)

                         tGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggcagg                                                                <  2:828737/93‑1 (MQ=255)

                         tGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggcagg                                                                >  2:4917415/1‑93 (MQ=255)

                           cTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTggcaggca                                                              <  1:5435825/93‑1 (MQ=255)

                             tAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGa                                                            <  2:1268342/93‑1 (MQ=255)

                              aaGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGGAGAc                                                           >  2:2623199/1‑93 (MQ=255)

                               aGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACa                                                          <  2:6705737/93‑1 (MQ=255)

                               aGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACa                                                          <  2:5255124/93‑1 (MQ=255)

                                gTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAg                                                         >  1:3085548/1‑93 (MQ=255)

                                gTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAg                                                         >  1:2309771/1‑93 (MQ=255)

                                  tttGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCTGGTAAACAGCACGTTGTGGCAGGCAGACAGGc                                                       <  1:5005430/93‑1 (MQ=255)

                                   ttGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGGAGACAcgcg                                                      >  2:3926469/1‑93 (MQ=255)

                                    tGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCGCGTTGTGGCAGGCAGACCGGCGa                                                     >  2:5613721/1‑93 (MQ=255)

                                    tGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGa                                                     <  1:6617280/93‑1 (MQ=255)

                                      cAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACg                                                   <  2:5921919/93‑1 (MQ=255)

                                       aGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACgg                                                  <  1:561945/93‑1 (MQ=255)

                                            aGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATAc                                             >  1:4192215/1‑93 (MQ=255)

                                            aGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATAc                                             >  1:1785514/1‑93 (MQ=255)

                                             gTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACg                                            >  2:875270/1‑93 (MQ=255)

                                              tCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGAGAGGCGACGGAATACGt                                           >  2:1559549/1‑93 (MQ=255)

                                              tCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGt                                           >  1:8383389/1‑93 (MQ=255)

                                              tCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGt                                           <  2:468314/93‑1 (MQ=255)

                                               cTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTc                                          <  2:1132005/93‑1 (MQ=255)

                                               cTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTc                                          <  1:7546542/93‑1 (MQ=255)

                                                tGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCa                                         <  2:3310200/93‑1 (MQ=255)

                                                  agaAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATc                                       <  1:4574793/93‑1 (MQ=255)

                                                  agaAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAAAAAGTCATc                                       >  2:7024973/1‑93 (MQ=255)

                                                   gaAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATcc                                      <  2:2794635/93‑1 (MQ=255)

                                                    aaaTACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCt                                     <  1:9857107/93‑1 (MQ=255)

                                                      aTACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTgg                                   <  2:8481448/93‑1 (MQ=255)

                                                        aCTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGAt                                 >  1:4313437/1‑93 (MQ=255)

                                                         cTGGTCAGAGCTTCTGCCGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGGCAGGCGACGGAATACGGAAAACTGGATc                                >  1:3634063/1‑93 (MQ=255)

                                                          tGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCCCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCa                               <  2:2072808/93‑1 (MQ=255)

                                                            gTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCAcg                             >  1:6083945/1‑93 (MQ=255)

                                                             tCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATTCTGGGTCAcgt                            >  1:7175409/1‑93 (MQ=255)

                                                               agagCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCTTGGATCAcgtcg                          >  1:483348/1‑93 (MQ=255)

                                                                gagCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCAcgtcgt                         >  1:3156864/1‑93 (MQ=255)

                                                                gaacTTCTGCTGTCAGGACGGCCTGGCGCCCGGTAAGCAGCTCGTTGGGGTAGGCAGGCAGGGGACGGAATACGTCATCCTGGATCAcgtcgt                         <  1:2547199/90‑1 (MQ=255)

                                                                    ttCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGa                     <  2:7152711/93‑1 (MQ=255)

                                                                     tCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGAt                    >  2:9616475/1‑93 (MQ=255)

                                                                     tCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGAt                    <  2:6054392/93‑1 (MQ=255)

                                                                      ttgcggTCAGGAATGCGTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGAtt                   <  1:1989026/92‑1 (MQ=255)

                                                                       tgctgTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGGCGGAATACGTCATCCTGGATCACGTCGTTGGAttt                  >  2:897980/1‑93 (MQ=255)

                                                                        gctgTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGGGACGGAATACGTCATCCTGGATCACGTCGTTTGAtttt                 >  1:9266564/1‑92 (MQ=255)

                                                                          tgTCAGAAATGGCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGACGACGGAATACTTCATCCTGGATCACGTCGTTGGATTTATc               <  2:446694/93‑1 (MQ=255)

                                                                           gTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCt              >  2:3720419/1‑93 (MQ=255)

                                                                            tCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCtt             >  1:3267216/1‑93 (MQ=255)

                                                                             cAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTc            <  2:2160034/93‑1 (MQ=255)

                                                                              aGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCa           >  2:8640220/1‑93 (MQ=255)

                                                                              aGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACCTCATCCTGGAACACGTCGGTGGATTTATCTTCa           >  1:798387/1‑93 (MQ=255)

                                                                                gAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCaaa         <  2:8015577/93‑1 (MQ=255)

                                                                                gAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCaaa         >  1:2665128/1‑93 (MQ=255)

                                                                                gAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCaaa         <  1:7934096/93‑1 (MQ=255)

                                                                                   tGCCTGGCGCCCGGTGAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGGTTTATTTTCAAAGaa      >  1:1506001/1‑93 (MQ=255)

                                                                                   tGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGGCAGGAGGCGGAATACGTCATCCTGGATCACCTCGTTGGATTTATTTTCAAAGaa      >  1:10047029/1‑93 (MQ=255)

                                                                                   tGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCCTCCTGGATCACGTCGTTGGATTTATTTTCAAAGat      >  1:2235732/1‑92 (MQ=255)

                                                                                   tGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGaa      >  1:2882310/1‑93 (MQ=255)

                                                                                   tGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGaa      >  2:5364736/1‑93 (MQ=255)

                                                                                    gCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAAt     <  2:5098825/93‑1 (MQ=255)

                                                                                    gCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAAt     >  1:7677138/1‑93 (MQ=255)

                                                                                     ccTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATa    <  2:6384324/93‑1 (MQ=255)

                                                                                     ccTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATa    <  1:5225154/93‑1 (MQ=255)

                                                                                     ccTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATa    >  1:3555178/1‑93 (MQ=255)

                                                                                      cTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACATGCCACGGAATACGTGATCCTGGCTCACGTCGATGGATTTATCTTTAAAGAATAg   >  1:9033499/1‑93 (MQ=255)

                                                                                       tGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACCGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCaaagaaaaga  >  1:8187154/1‑93 (MQ=255)

                                                                                       tGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGa  >  2:6519130/1‑93 (MQ=255)

                                                                                       tGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACACGCGGCGGAATACGTCATCCTGGATCACGTCGTTGGATTTATTTTCAAAGAATAGa  >  2:6430597/1‑93 (MQ=255)

                                                                                       tGGCGCCCGGTAAACAGCACGTTGTGGCAGAAAGACAGGCAACGGAATACGACATCCTGGATCACGTCGTTGGATTTATCTTCAAAAAATAGa  <  2:9223697/93‑1 (MQ=255)

GGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGA  >  NC_000913/1439894‑1440073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCGC  >  NC_000913/1439893‑1440077

CGGGCAGGTTTCGCCTTTTTCCTGATTGCTTAAGTGTTGCAGCGTAGTCTGTGAAATATTGGTCTGAGCTTCTGCCTTCAGGTATGCCTGGCGC                                                                                             >  SRR4302540.9075986/1‑94 (MQ=57)

CGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGC                                                                                             >  SRR4302540.1633108/1‑94 (MQ=60)

 GGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCC                                                                                            >  SRR4302540.2381182/1‑94 (MQ=60)

 GGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCC                                                                                            >  SRR4302540.7919870/1‑94 (MQ=60)

 GGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCC                                                                                            >  SRR4302540.4160097/1‑94 (MQ=60)

  GGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCC                                                                                           <  SRR4302540.4397480/94‑1 (MQ=60)

  GGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCC                                                                                           <  SRR4302540.2609501/94‑1 (MQ=60)

   GCAGGTTTCGCCTTTTTCCGGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCG                                                                                          >  SRR4302540.7538835/1‑94 (MQ=60)

   GCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCG                                                                                          <  SRR4302540.10090103/94‑1 (MQ=60)

   GCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCG                                                                                          >  SRR4302540.7538828/1‑94 (MQ=60)

    CAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGG                                                                                         >  SRR4302540.4434477/1‑94 (MQ=60)

    CAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGG                                                                                         >  SRR4302540.4268405/1‑94 (MQ=60)

    CAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGG                                                                                         >  SRR4302540.6449479/1‑94 (MQ=60)

    CAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGG                                                                                         >  SRR4302540.3225986/1‑94 (MQ=60)

     AGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGT                                                                                        >  SRR4302540.9181864/1‑94 (MQ=60)

     AGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGT                                                                                        >  SRR4302540.771244/1‑94 (MQ=60)

      GGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTA                                                                                       >  SRR4302540.258267/1‑94 (MQ=60)

       GTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGCCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAA                                                                                      >  SRR4302540.161332/1‑94 (MQ=60)

          TCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACA                                                                                   <  SRR4302540.1099867/94‑1 (MQ=60)

          TCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACA                                                                                   >  SRR4302540.3169844/1‑94 (MQ=60)

          TCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACA                                                                                   >  SRR4302540.4835317/1‑94 (MQ=60)

           CGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAG                                                                                  >  SRR4302540.1257710/1‑94 (MQ=60)

            GCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGC                                                                                 >  SRR4302540.386571/1‑94 (MQ=60)

            GCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGC                                                                                 >  SRR4302540.470323/1‑94 (MQ=60)

            GCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGC                                                                                 >  SRR4302540.6911235/1‑94 (MQ=60)

            GCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGC                                                                                 <  SRR4302540.954545/94‑1 (MQ=60)

             CCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCA                                                                                >  SRR4302540.1932161/1‑94 (MQ=60)

             CCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCA                                                                                >  SRR4302540.4491597/1‑94 (MQ=60)

              CTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAC                                                                               >  SRR4302540.2257169/1‑94 (MQ=60)

              CTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAC                                                                               <  SRR4302540.6951272/94‑1 (MQ=60)

              CTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAC                                                                               >  SRR4302540.3455960/1‑94 (MQ=60)

              CTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAC                                                                               <  SRR4302540.6951273/94‑1 (MQ=60)

              CTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCAC                                                                               >  SRR4302540.9943680/1‑94 (MQ=60)

              CTTTTTCCAGATTGCTTAAGATTTGCAGCGTCGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTGAACAGCAC                                                                               >  SRR4302540.187637/1‑94 (MQ=60)

                TTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGT                                                                             >  SRR4302540.3613603/1‑94 (MQ=60)

                TTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGT                                                                             <  SRR4302540.2834202/94‑1 (MQ=60)

                  TTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTG                                                                           <  SRR4302540.6273380/94‑1 (MQ=60)

                  TTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTG                                                                           <  SRR4302540.4809374/94‑1 (MQ=60)

                    CCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTG                                                                         <  SRR4302540.4603839/94‑1 (MQ=60)

                    CCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTG                                                                         >  SRR4302540.262886/1‑94 (MQ=60)

                    CCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGCCGCCCGGTAAACAGCACGTTGTG                                                                         <  SRR4302540.4921634/94‑1 (MQ=60)

                     CAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGG                                                                        <  SRR4302540.6842827/94‑1 (MQ=60)

                      AGATTGGTTAAGTTTTGCAGGCTAGTCTGAGGAATTCTGGTCAGGGCTTCTGCTGTTAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGC                                                                       <  SRR4302540.3636818/94‑1 (MQ=60)

                      AGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGC                                                                       >  SRR4302540.6827523/1‑94 (MQ=60)

                      AGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGC                                                                       <  SRR4302540.3636820/94‑1 (MQ=60)

                      AGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGC                                                                       >  SRR4302540.1918175/1‑94 (MQ=60)

                       GATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCA                                                                      >  SRR4302540.5669665/1‑94 (MQ=60)

                       GATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCA                                                                      <  SRR4302540.817623/94‑1 (MQ=60)

                       GATTGCTTAAGTTTTGCAGCGTACTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCA                                                                      <  SRR4302540.5814862/94‑1 (MQ=60)

                        ATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAG                                                                     <  SRR4302540.6625776/94‑1 (MQ=60)

                         TTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGG                                                                    <  SRR4302540.7077907/94‑1 (MQ=60)

                         TTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGG                                                                    <  SRR4302540.4189711/94‑1 (MQ=60)

                         TTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGG                                                                    <  SRR4302540.4091003/94‑1 (MQ=60)

                          TGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGC                                                                   <  SRR4302540.8621391/94‑1 (MQ=60)

                          TGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGC                                                                   >  SRR4302540.9106779/1‑94 (MQ=60)

                          TGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGC                                                                   >  SRR4302540.8607445/1‑94 (MQ=60)

                          TGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTAGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGC                                                                   <  SRR4302540.8621390/94‑1 (MQ=60)

                           GCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCG                                                                  >  SRR4302540.628612/1‑94 (MQ=60)

                           GCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCA                                                                  >  SRR4302540.9544003/1‑94 (MQ=60)

                           GCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCA                                                                  <  SRR4302540.2735506/94‑1 (MQ=60)

                            CTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAG                                                                 <  SRR4302540.3080633/94‑1 (MQ=60)

                            CTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAG                                                                 <  SRR4302540.5495613/94‑1 (MQ=60)

                             TTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGGAGA                                                                >  SRR4302540.7282744/1‑94 (MQ=60)

                             TTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGA                                                                >  SRR4302540.5644282/1‑94 (MQ=60)

                             TTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGA                                                                >  SRR4302540.4109487/1‑94 (MQ=60)

                              TAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGAC                                                               <  SRR4302540.7663338/94‑1 (MQ=60)

                              TAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGAC                                                               <  SRR4302540.7663339/94‑1 (MQ=60)

                                AGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTACACAGCACGTTGTGGCAGGGAGACAG                                                             >  SRR4302540.3119401/1‑94 (MQ=60)

                                AGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAG                                                             >  SRR4302540.3119402/1‑94 (MQ=60)

                                AGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAG                                                             >  SRR4302540.2334636/1‑94 (MQ=60)

                                  TTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGC                                                           <  SRR4302540.2892998/94‑1 (MQ=60)

                                  TTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGC                                                           <  SRR4302540.2892999/94‑1 (MQ=60)

                                   TTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCTGGTAAACAGCACGTTGTGGCAGGCAGACAGGCG                                                          <  SRR4302540.5059643/94‑1 (MQ=60)

                                     TGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGAC                                                        <  SRR4302540.6690563/94‑1 (MQ=60)

                                      GCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACCGGCGACG                                                       >  SRR4302540.264353/1‑94 (MQ=60)

                                      GCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACG                                                       <  SRR4302540.572358/94‑1 (MQ=60)

                                      GCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACG                                                       >  SRR4302540.264356/1‑94 (MQ=60)

                                       CAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGG                                                      <  SRR4302540.5990515/94‑1 (MQ=60)

                                       CAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGG                                                      <  SRR4302540.591702/94‑1 (MQ=60)

                                       CAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGG                                                      >  SRR4302540.7580484/1‑94 (MQ=60)

                                        AGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGTAATGCCTGGCGCCCAATAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGA                                                     <  SRR4302540.6206434/94‑1 (MQ=60)

                                        AGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGGCAGGCGACGGA                                                     >  SRR4302540.80542/1‑94 (MQ=60)

                                        AGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGA                                                     <  SRR4302540.568057/94‑1 (MQ=60)

                                        AGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGA                                                     >  SRR4302540.9137820/1‑94 (MQ=60)

                                         GCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAA                                                    <  SRR4302540.7759526/94‑1 (MQ=60)

                                          CGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAAT                                                   <  SRR4302540.1955805/94‑1 (MQ=60)

                                          CGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAAT                                                   <  SRR4302540.1415723/94‑1 (MQ=60)

                                          CGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAAA                                                   >  SRR4302540.3288190/1‑94 (MQ=60)

                                            TAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATAC                                                 >  SRR4302540.1804907/1‑94 (MQ=60)

                                            TAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATAC                                                 >  SRR4302540.4237815/1‑94 (MQ=60)

                                             AGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACG                                                <  SRR4302540.3126745/94‑1 (MQ=60)

                                              GTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGT                                               >  SRR4302540.8480659/1‑94 (MQ=60)

                                               TCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTC                                              <  SRR4302540.2193356/94‑1 (MQ=60)

                                                CTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGGCGGGATACGTCA                                             >  SRR4302540.2007488/1‑94 (MQ=60)

                                                CTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCA                                             <  SRR4302540.7631123/94‑1 (MQ=60)

                                                CTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCA                                             <  SRR4302540.6574867/94‑1 (MQ=60)

                                                   AGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCC                                          <  SRR4302540.4624145/94‑1 (MQ=60)

                                                   AGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCC                                          >  SRR4302540.548436/1‑94 (MQ=60)

                                                   AGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATAAGGCATCC                                          >  SRR4302540.420126/1‑94 (MQ=60)

                                                    GAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCT                                         <  SRR4302540.3488706/94‑1 (MQ=60)

                                                    GAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCT                                         <  SRR4302540.2978842/94‑1 (MQ=60)

                                                     AAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTGATCCTG                                        >  SRR4302540.9026774/1‑94 (MQ=60)

                                                     AAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTG                                        <  SRR4302540.9972295/94‑1 (MQ=60)

                                                      AATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGGCGACAGGCGGCGGAATACGTCATCCTGG                                       >  SRR4302540.2294008/1‑94 (MQ=60)

                                                        TACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGAT                                     <  SRR4302540.5697452/94‑1 (MQ=60)

                                                        TACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGAT                                     <  SRR4302540.1691715/94‑1 (MQ=60)

                                                        TACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGAT                                     >  SRR4302540.4360399/1‑94 (MQ=60)

                                                        TACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGAT                                     <  SRR4302540.10059755/94‑1 (MQ=60)

                                                         ACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCCAACAGGCGGCGGACGACGTCATCCTGGATC                                    >  SRR4302540.7384500/1‑94 (MQ=60)

                                                         ACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATC                                    >  SRR4302540.4337356/1‑94 (MQ=60)

                                                         ACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATC                                    <  SRR4302540.7818682/94‑1 (MQ=60)

                                                         ACTGGTCAGAGCTTCTGCCGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGGCAGGCGACGGAATACGgaaaactggatc                                    >  SRR4302540.3673846/1‑82 (MQ=60)

                                                          CTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCCGACAGGCGACGGCATACGTCATCCTGGATCC                                   >  SRR4302540.6659131/1‑94 (MQ=60)

                                                          CTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCA                                   <  SRR4302540.8072621/94‑1 (MQ=60)

                                                          CTGGTCAGAGCTTCTGCTGGCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCA                                   <  SRR4302540.2368576/94‑1 (MQ=60)

                                                           TGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCAC                                  <  SRR4302540.2783898/94‑1 (MQ=60)

                                                            GGTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACG                                 >  SRR4302540.6151656/1‑94 (MQ=60)

                                                             GTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATTCTGGGTCACGT                                >  SRR4302540.7255394/1‑94 (MQ=60)

                                                             GTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGT                                >  SRR4302540.1189150/1‑94 (MQ=60)

                                                             GTCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGT                                >  SRR4302540.8331799/1‑94 (MQ=60)

                                                              TCAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTC                               >  SRR4302540.1519106/1‑94 (MQ=60)

                                                               CAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCTTGGATCACGTCG                              >  SRR4302540.488519/1‑94 (MQ=60)

                                                               CAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCG                              <  SRR4302540.9423046/94‑1 (MQ=60)

                                                               CAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCG                              >  SRR4302540.4542383/1‑94 (MQ=60)

                                                               CAGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCG                              <  SRR4302540.2034651/94‑1 (MQ=60)

                                                                AGAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGT                             >  SRR4302540.3191223/1‑94 (MQ=60)

                                                                 GAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATGCGTCATCCTGGATCACGTCGTT                            >  SRR4302540.493797/1‑94 (MQ=60)

                                                                 GAGCTTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTT                            <  SRR4302540.3971458/94‑1 (MQ=60)

                                                                 GAACTTCTGCTGTCAGGACGGCCTGGCGCCCGGTAAGCAGCTCGTTGGGGTAGGCAGGCAGGGGACGGAATACGTCATCCTGGATCACGTCGTT                            <  SRR4302540.2574650/94‑1 (MQ=46)

                                                                     TTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGGT                        >  SRR4302540.9191158/1‑94 (MQ=60)

                                                                     TTCTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGAAAGGCGACGGAATGCGTCATCCTGGATCACGTCGTTGGAT                        >  SRR4302540.8023985/1‑94 (MQ=60)

                                                                       ttgcgGTCAGGAATGCGTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTT                      <  SRR4302540.2010583/89‑1 (MQ=60)

                                                                       CTGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTT                      <  SRR4302540.4108954/94‑1 (MQ=60)

                                                                        TGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGGGACGGAATACGTCATCCTGGATCACGTCGTTTGATTTT                     >  SRR4302540.9377396/1‑94 (MQ=60)

                                                                        TGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTT                     >  SRR4302540.527259/1‑94 (MQ=60)

                                                                        TGCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTA                     >  SRR4302540.4186577/1‑94 (MQ=60)

                                                                         GCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTAT                    <  SRR4302540.5325457/94‑1 (MQ=60)

                                                                         GCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTAT                    >  SRR4302540.8305364/1‑94 (MQ=60)

                                                                         GCTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTAT                    >  SRR4302540.3640809/1‑94 (MQ=60)

                                                                          CTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATT                   >  SRR4302540.9849858/1‑94 (MQ=60)

                                                                          CTGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATC                   <  SRR4302540.7530324/94‑1 (MQ=60)

                                                                           TGTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCT                  >  SRR4302540.2278739/1‑94 (MQ=60)

                                                                            GTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTT                 >  SRR4302540.3302869/1‑94 (MQ=60)

                                                                            GTCAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTT                 <  SRR4302540.686249/94‑1 (MQ=60)

                                                                              CAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATTTTCA               >  SRR4302540.6686356/1‑94 (MQ=60)

                                                                              CAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCA               <  SRR4302540.2640419/94‑1 (MQ=60)

                                                                              CAGGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACCTCATCCTGGAACACGTCGGTGGATTTATCTTCA               >  SRR4302540.806866/1‑94 (MQ=60)

                                                                                GGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAA             <  SRR4302540.5081837/94‑1 (MQ=60)

                                                                                GGAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAA             >  SRR4302540.2694023/1‑94 (MQ=60)

                                                                                 GAATGCCTGGCGCCCGGTAAACAGTACGTTGTGGCAAGCAGGCAGGCGACGGAATACGACATCCTGGATCACGTCGTTGGATTTATCTTCAAAG            <  SRR4302540.8313847/94‑1 (MQ=60)

                                                                                 GAATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAG            <  SRR4302540.8026572/94‑1 (MQ=60)

                                                                                  AATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGA           >  SRR4302540.7733888/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTGAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGGTTTATTTTCAAAGAA          >  SRR4302540.1522618/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGGCAGGAGGCGGAATACGTCATCCTGGATCACCTCGTTGGATTTATTTTCAAAGAA          >  SRR4302540.10163822/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCCTCCTGGATCACGTCGTTGGATTTATTTTCAAAGAT          >  SRR4302540.2259782/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAA          >  SRR4302540.2913671/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAA          >  SRR4302540.8146942/1‑94 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAA          <  SRR4302540.1609263/94‑1 (MQ=60)

                                                                                   ATGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAA          <  SRR4302540.1542547/94‑1 (MQ=60)

                                                                                    TGCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAAT         >  SRR4302540.7763929/1‑94 (MQ=60)

                                                                                     GCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATA        <  SRR4302540.9994509/94‑1 (MQ=60)

                                                                                     GCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATA        >  SRR4302540.3594023/1‑94 (MQ=60)

                                                                                     GCCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATA        <  SRR4302540.7006223/94‑1 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACATGCCACGGAATACGTGATCCTGGCTCACGTCGATGGATTTATCTTTAAAGAATAG       >  SRR4302540.9141909/1‑94 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAG       <  SRR4302540.8673212/94‑1 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAG       <  SRR4302540.1761068/94‑1 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAG       <  SRR4302540.645206/94‑1 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAG       <  SRR4302540.5282128/94‑1 (MQ=60)

                                                                                      CCTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAAACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAG       <  SRR4302540.6928816/94‑1 (MQ=60)

                                                                                       CTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACCGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAAAAGA      >  SRR4302540.8282266/1‑94 (MQ=60)

                                                                                       CTGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGGCGTTGGATTTATTTTTACAGAATAGA      >  SRR4302540.9230635/1‑94 (MQ=60)

                                                                                        TGGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGAT     >  SRR4302540.9731023/1‑94 (MQ=60)

                                                                                         GGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATC    <  SRR4302540.1837801/94‑1 (MQ=60)

                                                                                         GGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATC    <  SRR4302540.3811143/94‑1 (MQ=60)

                                                                                         GGCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATC    <  SRR4302540.424358/94‑1 (MQ=60)

                                                                                          GCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCG   <  SRR4302540.8619406/94‑1 (MQ=60)

                                                                                          GCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCG   <  SRR4302540.3033122/94‑1 (MQ=60)

                                                                                          GCGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCG   <  SRR4302540.4902910/94‑1 (MQ=60)

                                                                                           CGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCGC  >  SRR4302540.9360958/1‑94 (MQ=60)

CGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAGCACGTTGTGGCAGGCAGACAGGCGACGGAATACGTCATCCTGGATCACGTCGTTGGATTTATCTTCAAAGAATAGATCGC  >  NC_000913/1439893‑1440077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`