Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,449,800	T→C	T623A (ACC→GCC)	maoC ←	putative aldehyde dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,449,800	0	T	C	99.4%	972.1 / ‑3.6	307	T623A (ACC→GCC)	maoC	putative aldehyde dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (115/190); total (115/192)
Fisher's exact test for biased strand distribution p-value = 5.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.39e-01

Only 100 of 321 total aligned reads displayed.

CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC  >  NC_000913/1449710‑1449889

cAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCAt                                                                                         <  1:4131185/93‑1 (MQ=255)

 aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc                                                                                        <  1:4656696/93‑1 (MQ=255)

  gCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCg                                                                                       <  1:8171070/93‑1 (MQ=255)

  gCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCg                                                                                       >  2:1332613/1‑93 (MQ=255)

    ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc                                                                                     <  2:5778679/93‑1 (MQ=255)

     taTTCCACCACACCTGTTGGTGTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt                                                                                    >  1:1774965/2‑93 (MQ=255)

     cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt                                                                                    >  1:956930/1‑93 (MQ=255)

     cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt                                                                                    >  1:3651988/1‑93 (MQ=255)

     cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt                                                                                    >  1:8119510/1‑93 (MQ=255)

       ttCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTgg                                                                                  >  1:6460206/1‑93 (MQ=255)

       ttCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTgg                                                                                  >  1:5386051/1‑93 (MQ=255)

       ttCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTgg                                                                                  >  2:10025692/1‑93 (MQ=255)

       ttCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTgg                                                                                  >  2:5434148/1‑93 (MQ=255)

        tCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGc                                                                                 <  2:7037834/93‑1 (MQ=255)

         ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt                                                                                >  1:271698/1‑93 (MQ=255)

         ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt                                                                                <  2:2493214/93‑1 (MQ=255)

         ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt                                                                                <  2:3357471/93‑1 (MQ=255)

          caccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCtt                                                                               >  2:9727145/1‑93 (MQ=255)

          caccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCtt                                                                               >  1:7544137/1‑93 (MQ=255)

           cccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCttt                                                                              <  1:3840031/92‑1 (MQ=255)

            ccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTa                                                                             >  1:3195331/1‑93 (MQ=255)

              acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg                                                                           >  1:862199/1‑93 (MQ=255)

               cacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACgg                                                                          <  2:9661046/93‑1 (MQ=255)

               cacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTAAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGACTGGCTTTACgg                                                                          >  1:2398667/1‑93 (MQ=255)

                cccTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACggg                                                                         <  2:8247651/92‑1 (MQ=255)

                acCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACggg                                                                         >  1:6251333/1‑93 (MQ=255)

                acCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTCCGCTTACAGGGGAGACGCACCTGGATGGCATCGCCTGGCTTTACggg                                                                         >  2:8509701/1‑93 (MQ=255)

                 ccTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGt                                                                        <  2:5357418/93‑1 (MQ=255)

                 ccTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGt                                                                        >  1:6726799/1‑93 (MQ=255)

                   tGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTc                                                                      >  1:5817998/1‑93 (MQ=255)

                    gTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCg                                                                     >  2:2680699/1‑93 (MQ=255)

                    gTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCg                                                                     >  2:3802257/1‑93 (MQ=255)

                    gTTGGATTTTCTTCTGCGCTACACTGTTTATTTAGCGTCTTGCGCTTACAAGTGCGACGCACCTGGATGGGATCGCCTCGTTTTACGGGCTCg                                                                     >  2:6222049/1‑93 (MQ=255)

                     ttGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGa                                                                    >  1:4376902/1‑93 (MQ=255)

                       ggTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa                                                                  <  1:6932293/93‑1 (MQ=255)

                       ggTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa                                                                  <  1:1683887/93‑1 (MQ=255)

                          ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa                                                               <  1:9811713/93‑1 (MQ=255)

                          ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa                                                               <  1:9368809/93‑1 (MQ=255)

                          ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa                                                               <  1:1181487/93‑1 (MQ=255)

                          ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa                                                               <  1:778393/93‑1 (MQ=255)

                           tttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAc                                                              <  2:6864485/93‑1 (MQ=255)

                              cttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCa                                                           >  1:7656432/1‑93 (MQ=255)

                               ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa                                                          >  1:2252326/1‑93 (MQ=255)

                                 ctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGc                                                        >  2:3024984/1‑93 (MQ=255)

                                 ctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGc                                                        <  2:3683017/93‑1 (MQ=255)

                                 ctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGc                                                        <  1:263608/93‑1 (MQ=255)

                                  tGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCt                                                       <  1:8331001/93‑1 (MQ=255)

                                   gcgcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCtt                                                      <  1:2159966/93‑1 (MQ=255)

                                   gcgcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCtt                                                      <  1:2320724/93‑1 (MQ=255)

                                     gcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTc                                                    <  2:7303836/93‑1 (MQ=255)

                                      cTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTcc                                                   >  2:8153139/1‑93 (MQ=255)

                                       tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  <  2:7249909/93‑1 (MQ=255)

                                       tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCATGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  <  1:1836978/93‑1 (MQ=255)

                                         cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc                                                <  1:6864225/93‑1 (MQ=255)

                                         cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc                                                <  1:895363/93‑1 (MQ=255)

                                         cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc                                                >  1:4022587/1‑93 (MQ=255)

                                          gCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGcc                                               >  2:484426/1‑93 (MQ=255)

                                          gCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGcc                                               >  1:4290421/1‑93 (MQ=255)

                                          gCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGcc                                               >  1:4889039/1‑93 (MQ=255)

                                            tGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCg                                             <  2:812362/93‑1 (MQ=255)

                                             gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt                                            <  1:2422943/93‑1 (MQ=255)

                                             gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt                                            >  2:4286055/1‑93 (MQ=255)

                                             gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt                                            >  2:739125/1‑93 (MQ=255)

                                              ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           <  2:2984040/93‑1 (MQ=255)

                                              ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           <  2:5921675/93‑1 (MQ=255)

                                              ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           <  1:7607956/93‑1 (MQ=255)

                                               ttttgCAGCGGCTTGCGCTTACAGGTGAGACGCACCTGGAGGGCATCGCCTGGCTTTACGGTTTCGATAAAACGCAAGCTTTCCAGCCCGTAg                                          <  2:5287582/93‑1 (MQ=255)

                                                 tttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGtt                                        <  2:1114151/93‑1 (MQ=255)

                                                     aGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCa                                    <  2:3479909/93‑1 (MQ=255)

                                                        gTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATg                                 <  1:2283536/93‑1 (MQ=255)

                                                        gTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATg                                 <  2:8958586/93‑1 (MQ=255)

                                                         tCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATga                                >  1:7143951/1‑93 (MQ=255)

                                                          cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac                               <  2:5040459/93‑1 (MQ=255)

                                                           ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc                              >  2:4814535/1‑93 (MQ=255)

                                                           ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc                              <  2:6648871/93‑1 (MQ=255)

                                                           ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc                              <  2:9380137/93‑1 (MQ=255)

                                                            tGCGCTTACAGGTGAGACGCCCCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccg                             <  2:5128593/93‑1 (MQ=255)

                                                            tGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccg                             <  2:6938008/93‑1 (MQ=255)

                                                                cTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggacc                         <  2:7557909/93‑1 (MQ=255)

                                                                 ttACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggaccg                        <  1:1118133/93‑1 (MQ=255)

                                                                  tACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAACCGCAAGCTTTCCAGCCCGTAGGTAGCAATGACCTGACCGa                       <  2:554553/93‑1 (MQ=255)

                                                                   aCAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGac                      <  2:1935744/93‑1 (MQ=255)

                                                                     aGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGacac                    <  2:8394843/93‑1 (MQ=255)

                                                                     aGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGacac                    <  1:5488828/93‑1 (MQ=255)

                                                                      ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   >  2:2232374/1‑93 (MQ=255)

                                                                      ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   >  2:4604662/1‑93 (MQ=255)

                                                                      ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTGTCCAGCCCGTAGTTAGCAATGACCGGACCGacacg                   >  2:1379196/1‑92 (MQ=255)

                                                                       gTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCg                  <  2:2387967/93‑1 (MQ=255)

                                                                       gTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCg                  <  2:4038789/93‑1 (MQ=255)

                                                                       gTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCg                  >  1:7968284/1‑93 (MQ=255)

                                                                       gTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCg                  <  1:5057512/93‑1 (MQ=255)

                                                                         gagaCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGc                <  2:6448357/93‑1 (MQ=255)

                                                                               cACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGAc          >  2:1572967/1‑93 (MQ=255)

                                                                                  cTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGCCATCGACaaa       >  1:3498746/1‑93 (MQ=255)

                                                                                  cTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGAAATGACCGGACCGACACCGGCATCGACaaa       <  2:8479858/93‑1 (MQ=255)

                                                                                   tGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAAc      <  1:8821913/93‑1 (MQ=255)

                                                                                    ggATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACa     <  2:5199243/93‑1 (MQ=255)

                                                                                     gATGGCATCGCCTGGCTTTACGGTTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAg    <  1:1332613/93‑1 (MQ=255)

                                                                                      aTGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGa   <  2:928850/93‑1 (MQ=255)

                                                                                       tGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAc  >  1:3756838/1‑93 (MQ=255)

CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC  >  NC_000913/1449710‑1449889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC  >  NC_000913/1449708‑1449893

TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCA                                                                                              >  SRR4302540.3185941/1‑94 (MQ=60)

 ACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCAT                                                                                             <  SRR4302540.5006410/94‑1 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            >  SRR4302540.2405951/1‑94 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            >  SRR4302540.6024108/1‑94 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            <  SRR4302540.1551599/94‑1 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            <  SRR4302540.9952047/94‑1 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            <  SRR4302540.3611805/94‑1 (MQ=60)

  CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC                                                                                            <  SRR4302540.4175860/94‑1 (MQ=60)

   AGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCG                                                                                           <  SRR4302540.4706536/94‑1 (MQ=60)

   AGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCG                                                                                           >  SRR4302540.582322/1‑94 (MQ=60)

   AGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCG                                                                                           >  SRR4302540.8035568/1‑94 (MQ=60)

    GCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGC                                                                                          <  SRR4302540.8265966/94‑1 (MQ=60)

     CCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCC                                                                                         <  SRR4302540.2344730/94‑1 (MQ=60)

      CTATTCCACCACACCTGTTGGTGTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        >  SRR4302540.1794239/1‑94 (MQ=60)

      CCATTCCCCCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        <  SRR4302540.7861476/94‑1 (MQ=60)

      CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCT                                                                                        <  SRR4302540.2727006/94‑1 (MQ=60)

      CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        >  SRR4302540.8669944/1‑94 (MQ=60)

      CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        >  SRR4302540.3691991/1‑94 (MQ=60)

      CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        >  SRR4302540.8213737/1‑94 (MQ=60)

      CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT                                                                                        >  SRR4302540.966848/1‑94 (MQ=60)

       CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG                                                                                       >  SRR4302540.6669617/1‑94 (MQ=60)

       CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG                                                                                       <  SRR4302540.9971333/94‑1 (MQ=60)

       CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG                                                                                       <  SRR4302540.9806048/94‑1 (MQ=60)

        ATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGG                                                                                      >  SRR4302540.5445291/1‑94 (MQ=60)

        ATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGG                                                                                      >  SRR4302540.6532111/1‑94 (MQ=60)

        ATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGG                                                                                      >  SRR4302540.4199920/1‑94 (MQ=60)

         TTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGC                                                                                     <  SRR4302540.2435361/94‑1 (MQ=60)

          TCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCT                                                                                    >  SRR4302540.274373/1‑94 (MQ=60)

          TCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCT                                                                                    <  SRR4302540.4806047/94‑1 (MQ=60)

           CCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTT                                                                                   >  SRR4302540.7628675/1‑94 (MQ=60)

            CACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTT                                                                                  >  SRR4302540.6986019/1‑94 (MQ=60)

             CCCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTA                                                                                 <  SRR4302540.6848488/94‑1 (MQ=60)

             CCCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTA                                                                                 <  SRR4302540.3881792/94‑1 (MQ=60)

             ACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTA                                                                                 >  SRR4302540.3230034/1‑94 (MQ=60)

             ACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTA                                                                                 >  SRR4302540.5514065/1‑94 (MQ=60)

              CCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTAC                                                                                <  SRR4302540.180281/94‑1 (MQ=60)

              CCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTAC                                                                                <  SRR4302540.3620991/94‑1 (MQ=60)

               CACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACG                                                                               >  SRR4302540.871355/1‑94 (MQ=60)

               CACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACG                                                                               <  SRR4302540.8370663/94‑1 (MQ=60)

               CACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACG                                                                               <  SRR4302540.2963758/94‑1 (MQ=60)

                ACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGG                                                                              >  SRR4302540.2429674/1‑94 (MQ=60)

                ACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTAAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGACTGGCTTTACGG                                                                              >  SRR4302540.2424519/1‑94 (MQ=60)

                 CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG                                                                             >  SRR4302540.6320888/1‑94 (MQ=60)

                 CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG                                                                             >  SRR4302540.4391009/1‑94 (MQ=60)

                 CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG                                                                             <  SRR4302540.9534031/94‑1 (MQ=60)

                  ACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGT                                                                            >  SRR4302540.6801055/1‑94 (MQ=60)

                   CCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTT                                                                           >  SRR4302540.3258189/1‑94 (MQ=60)

                   CCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTT                                                                           >  SRR4302540.4792889/1‑94 (MQ=60)

                    CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTC                                                                          <  SRR4302540.9318977/94‑1 (MQ=60)

                    CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTC                                                                          >  SRR4302540.9350874/1‑94 (MQ=60)

                    CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTC                                                                          >  SRR4302540.5882311/1‑94 (MQ=60)

                     TGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCG                                                                         >  SRR4302540.6130052/1‑94 (MQ=60)

                     TGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCG                                                                         >  SRR4302540.7418484/1‑94 (MQ=60)

                      GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA                                                                        >  SRR4302540.4424427/1‑94 (MQ=60)

                      GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA                                                                        <  SRR4302540.790819/94‑1 (MQ=60)

                      GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA                                                                        <  SRR4302540.4989395/94‑1 (MQ=60)

                      GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA                                                                        >  SRR4302540.1807842/1‑94 (MQ=60)

                       TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAT                                                                       >  SRR4302540.6977380/1‑94 (MQ=60)

                       TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAT                                                                       <  SRR4302540.3054977/94‑1 (MQ=60)

                       TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAT                                                                       <  SRR4302540.6469596/94‑1 (MQ=60)

                       TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAT                                                                       <  SRR4302540.6900260/94‑1 (MQ=60)

                        TGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATA                                                                      <  SRR4302540.6604206/94‑1 (MQ=60)

                         GGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAA                                                                     <  SRR4302540.7009435/94‑1 (MQ=60)

                         GGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAA                                                                     <  SRR4302540.1702159/94‑1 (MQ=60)

                           TTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAA                                                                   <  SRR4302540.7454963/94‑1 (MQ=60)

                            TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAT                                                                  <  SRR4302540.786692/94‑1 (MQ=60)

                            TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC                                                                  <  SRR4302540.1193687/94‑1 (MQ=60)

                            TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC                                                                  <  SRR4302540.8225901/94‑1 (MQ=60)

                            TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC                                                                  <  SRR4302540.9926541/94‑1 (MQ=60)

                            TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC                                                                  <  SRR4302540.9480355/94‑1 (MQ=60)

                               TCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCA                                                               >  SRR4302540.7742638/1‑94 (MQ=60)

                                CTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAA                                                              <  SRR4302540.7751389/94‑1 (MQ=60)

                                CTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAA                                                              <  SRR4302540.8373117/94‑1 (MQ=60)

                                CTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAA                                                              >  SRR4302540.3371789/1‑94 (MQ=60)

                                CTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAA                                                              >  SRR4302540.2276500/1‑94 (MQ=60)

                                 TTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAG                                                             <  SRR4302540.1335418/94‑1 (MQ=60)

                                   CTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCT                                                           <  SRR4302540.266181/94‑1 (MQ=60)

                                   CTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCT                                                           >  SRR4302540.2289797/1‑94 (MQ=60)

                                    TGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTT                                                          <  SRR4302540.8427701/94‑1 (MQ=60)

                                     GCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTT                                                         <  SRR4302540.7670727/94‑1 (MQ=60)

                                     GCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTT                                                         <  SRR4302540.2345713/94‑1 (MQ=60)

                                     GCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTT                                                         <  SRR4302540.8867173/94‑1 (MQ=60)

                                     GCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTT                                                         <  SRR4302540.2183227/94‑1 (MQ=60)

                                      CGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTC                                                        <  SRR4302540.8581091/94‑1 (MQ=60)

                                       GCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCC                                                       >  SRR4302540.3824838/1‑94 (MQ=60)

                                        CTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCA                                                      >  SRR4302540.7113169/1‑94 (MQ=60)

                                        CTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCA                                                      <  SRR4302540.5196586/94‑1 (MQ=60)

                                        CTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCA                                                      <  SRR4302540.8215434/94‑1 (MQ=60)

                                         TACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAG                                                     <  SRR4302540.8009041/94‑1 (MQ=60)

                                         TACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCATGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAG                                                     <  SRR4302540.1857092/94‑1 (MQ=60)

                                         TACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCATGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAG                                                     <  SRR4302540.1864478/94‑1 (MQ=60)

                                          ACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGC                                                    >  SRR4302540.4065941/1‑94 (MQ=60)

                                          ACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTACAGC                                                    >  SRR4302540.4065942/1‑94 (MQ=60)

                                           CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC                                                   >  SRR4302540.4941597/1‑94 (MQ=60)

                                           CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC                                                   <  SRR4302540.6940297/94‑1 (MQ=60)

                                           CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC                                                   >  SRR4302540.4337097/1‑94 (MQ=60)

                                           CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC                                                   <  SRR4302540.4274192/94‑1 (MQ=60)

                                           CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC                                                   <  SRR4302540.904877/94‑1 (MQ=60)

                                             CTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCG                                                 >  SRR4302540.2203511/1‑94 (MQ=60)

                                               GTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTA                                               <  SRR4302540.2449048/94‑1 (MQ=60)

                                                TTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG                                              <  SRR4302540.7721121/94‑1 (MQ=60)

                                                TTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG                                              <  SRR4302540.5655102/94‑1 (MQ=60)

                                                TTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG                                              <  SRR4302540.7693450/94‑1 (MQ=60)

                                                TTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG                                              <  SRR4302540.2706062/94‑1 (MQ=60)

                                                TTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG                                              <  SRR4302540.415461/94‑1 (MQ=60)

                                                    TTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGGCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAG                                          <  SRR4302540.5454067/94‑1 (MQ=60)

                                                     tccacctcttgcgcttgcagggtaaacgccCCTGGATGGCATCGCCTGGCCTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC                                         <  SRR4302540.1461499/64‑1 (MQ=60)

                                                     TCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC                                         >  SRR4302540.1760850/1‑94 (MQ=60)

                                                     TCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC                                         <  SRR4302540.1461500/94‑1 (MQ=60)

                                                     TCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGACTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC                                         <  SRR4302540.2476486/94‑1 (MQ=60)

                                                       AGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAA                                       <  SRR4302540.6332870/94‑1 (MQ=60)

                                                         CGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATG                                     >  SRR4302540.2506091/1‑94 (MQ=60)

                                                          GTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGA                                    <  SRR4302540.3961138/94‑1 (MQ=60)

                                                          GTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGA                                    >  SRR4302540.7223546/1‑94 (MQ=60)

                                                          GTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGA                                    <  SRR4302540.2308078/94‑1 (MQ=60)

                                                           TCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGAC                                   <  SRR4302540.8955030/94‑1 (MQ=60)

                                                            CTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACC                                  >  SRR4302540.458737/1‑94 (MQ=60)

                                                            CTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACC                                  <  SRR4302540.1844373/94‑1 (MQ=60)

                                                              TGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGG                                <  SRR4302540.7709524/94‑1 (MQ=60)

                                                              TGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGG                                >  SRR4302540.4172618/1‑94 (MQ=60)

                                                               NCGCTNANAGNTGAGACGCACNTNGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAANCTTTCCAGCCCGTAGTTAGCAATGACCGGA                               <  SRR4302540.9979242/94‑1 (MQ=60)

                                                               GCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGTTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGA                               <  SRR4302540.2422031/94‑1 (MQ=60)

                                                               GCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGA                               <  SRR4302540.1164354/94‑1 (MQ=60)

                                                                CGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGAC                              <  SRR4302540.2421993/94‑1 (MQ=60)

                                                                 GCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACC                             <  SRR4302540.3995062/94‑1 (MQ=60)

                                                                 GCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACC                             <  SRR4302540.4522485/94‑1 (MQ=60)

                                                                 GCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACC                             >  SRR4302540.1246780/1‑94 (MQ=60)

                                                                  CTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCG                            >  SRR4302540.4390505/1‑94 (MQ=60)

                                                                  CTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCG                            <  SRR4302540.7152852/94‑1 (MQ=60)

                                                                   TTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGA                           <  SRR4302540.1129728/94‑1 (MQ=60)

                                                                   TTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGA                           <  SRR4302540.1129727/94‑1 (MQ=60)

                                                                    TACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGAC                          <  SRR4302540.9915003/94‑1 (MQ=60)

                                                                      CAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAC                        <  SRR4302540.3703387/94‑1 (MQ=60)

                                                                       AGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACC                       <  SRR4302540.5549249/94‑1 (MQ=60)

                                                                       AGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACC                       <  SRR4302540.9585408/94‑1 (MQ=60)

                                                                        GGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGGTAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCG                      >  SRR4302540.8061140/1‑94 (MQ=60)

                                                                        GGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCG                      >  SRR4302540.8061139/1‑94 (MQ=60)

                                                                        GGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCG                      >  SRR4302540.3717259/1‑94 (MQ=60)

                                                                        GGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCG                      >  SRR4302540.6058557/1‑94 (MQ=60)

                                                                        GGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCG                      <  SRR4302540.2193616/94‑1 (MQ=60)

                                                                         GTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGG                     <  SRR4302540.5112190/94‑1 (MQ=60)

                                                                          TGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGC                    <  SRR4302540.3523901/94‑1 (MQ=60)

                                                                          TGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGC                    <  SRR4302540.8540394/94‑1 (MQ=60)

                                                                             GACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATC                 >  SRR4302540.3848942/1‑94 (MQ=60)

                                                                              ACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCG                <  SRR4302540.8178845/94‑1 (MQ=60)

                                                                               CGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGA               >  SRR4302540.4965417/1‑94 (MQ=60)

                                                                                 CACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACA             >  SRR4302540.8869793/1‑94 (MQ=60)

                                                                                  ACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAA            >  SRR4302540.5136702/1‑94 (MQ=60)

                                                                                   CCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAA           >  SRR4302540.1735668/1‑94 (MQ=60)

                                                                                   CCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGCCATCGACAAA           >  SRR4302540.3536846/1‑94 (MQ=60)

                                                                                    CTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAAC          >  SRR4302540.7115470/1‑94 (MQ=60)

                                                                                    CTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAAC          >  SRR4302540.490052/1‑94 (MQ=60)

                                                                                     TGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACA         <  SRR4302540.8923920/94‑1 (MQ=60)

                                                                                     TGGATGGCATCGACTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCGAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACA         <  SRR4302540.8923921/94‑1 (MQ=60)

                                                                                      TGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACCCCGGCATCGACAAACAG        <  SRR4302540.1893136/94‑1 (MQ=60)

                                                                                      GGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAG        >  SRR4302540.9863232/1‑94 (MQ=60)

                                                                                       GATGGCATCGCCTGGCTTTACGGTTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGA       <  SRR4302540.1346549/94‑1 (MQ=60)

                                                                                        ATGGGATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC      <  SRR4302540.2321302/94‑1 (MQ=60)

                                                                                        ATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC      <  SRR4302540.7676173/94‑1 (MQ=60)

                                                                                        ATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC      >  SRR4302540.2278945/1‑94 (MQ=60)

                                                                                        ATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC      >  SRR4302540.3797821/1‑94 (MQ=60)

                                                                                          GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC    >  SRR4302540.3516716/1‑94 (MQ=60)

                                                                                          GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC    >  SRR4302540.3109093/1‑94 (MQ=60)

                                                                                          GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC    >  SRR4302540.2970545/1‑94 (MQ=60)

                                                                                          GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC    >  SRR4302540.4147671/1‑94 (MQ=60)

                                                                                          GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC    <  SRR4302540.7432867/94‑1 (MQ=60)

                                                                                            CATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC  >  SRR4302540.4933838/1‑94 (MQ=60)

TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC  >  NC_000913/1449708‑1449893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`