Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,449,800 |
T→C |
T623A (ACC→GCC) |
maoC ← |
putative aldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,449,800 | 0 | T | C | 99.6%
| 718.1
/ NA
| 224 | T623A (ACC→GCC) | maoC | putative aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (99/124); minor base G (0/1); total (99/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 228 total aligned reads displayed.
CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC > NC_000913/1449710‑1449889
|
cAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCAt < 1:5851079/93‑1 (MQ=255)
cAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCAt < 1:4215008/93‑1 (MQ=255)
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc < 2:5501562/93‑1 (MQ=255)
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc < 2:1370043/93‑1 (MQ=255)
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc < 2:308214/93‑1 (MQ=255)
cccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGc > 2:1645324/1‑93 (MQ=255)
ccATTCCCCCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc < 2:5842416/93‑1 (MQ=255)
ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc > 2:221424/1‑93 (MQ=255)
ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc > 2:6294900/1‑93 (MQ=255)
ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc > 1:6260327/1‑93 (MQ=255)
ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc < 2:4277992/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt < 2:5063928/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt < 1:52831/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt < 1:947422/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt < 2:5743059/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt < 1:3288364/93‑1 (MQ=255)
cATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCt > 1:2437282/1‑93 (MQ=255)
ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt < 2:321667/93‑1 (MQ=255)
ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt < 1:1024478/93‑1 (MQ=255)
caccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCtt < 1:5365469/93‑1 (MQ=255)
ccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTa < 2:5811375/93‑1 (MQ=255)
ccacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTa > 2:3944903/1‑93 (MQ=255)
cacaCCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTAc < 1:1372585/93‑1 (MQ=255)
acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg < 1:1322178/93‑1 (MQ=255)
acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg < 1:1072876/93‑1 (MQ=255)
acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg > 2:1721779/1‑93 (MQ=255)
acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg > 2:489093/1‑93 (MQ=255)
cacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACgg < 1:4112968/93‑1 (MQ=255)
ccTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGt > 2:4729421/1‑93 (MQ=255)
tGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTc < 1:5531478/93‑1 (MQ=255)
gTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCg > 1:2811873/1‑93 (MQ=255)
ttGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCgc < 1:5943578/93‑2 (MQ=255)
tGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAt > 2:182599/1‑93 (MQ=255)
ggTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa < 2:4613899/93‑1 (MQ=255)
gTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaa < 2:2758206/93‑1 (MQ=255)
tttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaa < 2:3520418/93‑1 (MQ=255)
ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa < 1:881811/93‑1 (MQ=255)
ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa < 2:5529459/93‑1 (MQ=255)
tttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAc < 1:1633907/93‑1 (MQ=255)
ttcttcTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACg > 2:2030820/1‑93 (MQ=255)
tcttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGc > 1:1126110/1‑93 (MQ=255)
ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa < 2:2329140/93‑1 (MQ=255)
ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa > 1:4979594/1‑93 (MQ=255)
tctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAg > 1:3481438/1‑93 (MQ=255)
tctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACCGGTTCGATACAACGCAAg > 2:4467659/1‑93 (MQ=255)
gcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTc > 1:4672807/1‑93 (MQ=255)
gcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGGGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTc > 2:219767/1‑93 (MQ=255)
cTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTcc > 1:4303053/1‑93 (MQ=255)
tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa > 2:244119/1‑93 (MQ=255)
tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa > 2:4548472/1‑93 (MQ=255)
aCGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAg > 2:2586426/1‑93 (MQ=255)
aCGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAg < 1:6018524/93‑1 (MQ=255)
aCGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAg > 2:1299388/1‑93 (MQ=255)
cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc < 2:2062465/93‑1 (MQ=255)
cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc < 2:1627691/93‑1 (MQ=255)
cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc < 1:5158170/93‑1 (MQ=255)
cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc > 2:3656571/1‑93 (MQ=255)
gCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGcc > 2:1214962/1‑93 (MQ=255)
gCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGcc < 2:4322366/93‑1 (MQ=255)
gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt > 1:787941/1‑93 (MQ=255)
gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt > 1:511529/1‑93 (MQ=255)
ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa < 2:2635676/93‑1 (MQ=255)
ttttttCAGCGTCGTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTCCGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa < 1:738502/93‑1 (MQ=255)
tttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAg < 1:1149957/93‑1 (MQ=255)
tttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGtt < 2:4390823/93‑1 (MQ=255)
tCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAg > 1:2499399/1‑93 (MQ=255)
tCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAg < 1:184802/93‑1 (MQ=255)
aGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCa < 1:6055580/93‑1 (MQ=255)
gCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCaa < 2:2842916/93‑1 (MQ=255)
gCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCaa < 1:4489204/93‑1 (MQ=255)
gTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATg > 2:3302515/1‑93 (MQ=255)
gTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATg > 1:2152213/1‑93 (MQ=255)
tCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATga > 1:2411353/1‑93 (MQ=255)
cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac < 1:4011265/93‑1 (MQ=255)
cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac < 2:5626710/93‑1 (MQ=255)
cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac < 2:5561933/93‑1 (MQ=255)
ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc < 1:3773063/93‑1 (MQ=255)
ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc < 1:2961429/93‑1 (MQ=255)
gcTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggac > 2:627505/1‑93 (MQ=255)
ttACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggaccg < 2:755526/93‑1 (MQ=255)
ttACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggaccg < 1:1709859/93‑1 (MQ=255)
ttACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggaccg > 1:3907285/1‑93 (MQ=255)
ttACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggaccg > 1:3253589/1‑93 (MQ=255)
tACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGa > 2:192307/1‑93 (MQ=255)
aGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGacac > 2:1506201/1‑93 (MQ=255)
ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc > 2:3050030/1‑93 (MQ=255)
gagaCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGc < 2:3998727/93‑1 (MQ=255)
gagaCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGc > 1:3504993/1‑93 (MQ=255)
agaCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCa > 2:3601123/1‑93 (MQ=255)
aCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATc > 2:2085721/1‑93 (MQ=255)
gCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGa < 2:2873429/93‑1 (MQ=255)
aCCTGGATTGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACa > 2:6138391/1‑93 (MQ=255)
aCCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACa > 2:5392679/1‑93 (MQ=255)
aCCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACa > 1:1908788/1‑93 (MQ=255)
cTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACaaa > 1:1591744/1‑93 (MQ=255)
cTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACaaa > 1:5391352/1‑93 (MQ=255)
tGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAAc > 2:6090358/1‑93 (MQ=255)
ggATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACa < 1:5717106/93‑1 (MQ=255)
gATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAg < 1:2834750/93‑1 (MQ=255)
tGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAc > 2:5208951/1‑93 (MQ=255)
|
CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC > NC_000913/1449710‑1449889
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC > NC_000913/1449708‑1449893
|
TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCCCCTGGATGGGA > SRR4302533.339473/1‑94 (MQ=60)
TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCA < SRR4302533.6161182/94‑1 (MQ=60)
CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC < SRR4302533.5886452/94‑1 (MQ=60)
CAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATC < SRR4302533.4240507/94‑1 (MQ=60)
CCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCC > SRR4302533.6297754/1‑94 (MQ=60)
CCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCGGTTTTTTCAGCGCCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCC < SRR4302533.530510/94‑1 (MQ=60)
CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT > SRR4302533.2452329/1‑94 (MQ=60)
CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT < SRR4302533.1629494/94‑1 (MQ=60)
CCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCT < SRR4302533.1243958/94‑1 (MQ=60)
CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG < SRR4302533.5958096/94‑1 (MQ=60)
CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG < SRR4302533.3308662/94‑1 (MQ=60)
CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG < SRR4302533.53188/94‑1 (MQ=60)
CATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTG < SRR4302533.952992/94‑1 (MQ=60)
ATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGG < SRR4302533.4486322/94‑1 (MQ=60)
CCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTT < SRR4302533.1030500/94‑1 (MQ=60)
CACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTT < SRR4302533.5397701/94‑1 (MQ=60)
ACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTA < SRR4302533.6082781/94‑1 (MQ=60)
CCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTAC < SRR4302533.3757673/94‑1 (MQ=60)
CACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACG < SRR4302533.1380842/94‑1 (MQ=60)
CACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACG < SRR4302533.662752/94‑1 (MQ=60)
ACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGG < SRR4302533.1079201/94‑1 (MQ=60)
ACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGG < SRR4302533.1330111/94‑1 (MQ=60)
CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG < SRR4302533.5151770/94‑1 (MQ=60)
CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG < SRR4302533.4137963/94‑1 (MQ=60)
CACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGG > SRR4302533.786486/1‑94 (MQ=60)
CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTC > SRR4302533.3290876/1‑94 (MQ=60)
CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTC < SRR4302533.3138479/94‑1 (MQ=60)
CTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTC > SRR4302533.2458143/1‑94 (MQ=60)
TGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCG < SRR4302533.5564874/94‑1 (MQ=60)
TGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCG < SRR4302533.4635686/94‑1 (MQ=60)
TGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCG > SRR4302533.2829179/1‑94 (MQ=60)
GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA > SRR4302533.5979891/1‑94 (MQ=60)
GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGA < SRR4302533.1700269/94‑1 (MQ=60)
GTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGGTCGA > SRR4302533.5449991/1‑94 (MQ=60)
TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGCT < SRR4302533.5979525/94‑1 (MQ=60)
TTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAT > SRR4302533.898761/1‑94 (MQ=60)
TGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATA > SRR4302533.3804217/1‑94 (MQ=60)
TGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGCGAGACGCACCTGGAACGCATCGGCTGGCTTTACGGGCTCGATA > SRR4302533.4575851/1‑94 (MQ=60)
TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC < SRR4302533.1367467/94‑1 (MQ=60)
TTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAC < SRR4302533.886991/94‑1 (MQ=60)
TTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACG < SRR4302533.1643802/94‑1 (MQ=60)
TTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGC > SRR4302533.1132798/1‑94 (MQ=60)
TTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGC > SRR4302533.2099441/1‑94 (MQ=60)
TCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCA > SRR4302533.1145387/1‑94 (MQ=60)
TCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCA > SRR4302533.723023/1‑94 (MQ=60)
CTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAA > SRR4302533.5009787/1‑94 (MQ=60)
TTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCCACTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAG < SRR4302533.870273/94‑1 (MQ=60)
TTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAG > SRR4302533.3502913/1‑94 (MQ=60)
TCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGC > SRR4302533.506477/1‑94 (MQ=60)
TCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGC < SRR4302533.5858121/94‑1 (MQ=60)
CTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCT > SRR4302533.3519373/1‑94 (MQ=60)
GCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTT > SRR4302533.3934564/1‑94 (MQ=60)
CGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTC > SRR4302533.4701122/1‑94 (MQ=60)
GCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCC < SRR4302533.214028/94‑1 (MQ=60)
GCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCC > SRR4302533.4328943/1‑94 (MQ=60)
GCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCC < SRR4302533.2591710/94‑1 (MQ=60)
CTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCA > SRR4302533.1882284/1‑94 (MQ=60)
TACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAG < SRR4302533.1674018/94‑1 (MQ=60)
TACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAG < SRR4302533.5455788/94‑1 (MQ=60)
ACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGC < SRR4302533.6054994/94‑1 (MQ=60)
CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC < SRR4302533.5189308/94‑1 (MQ=60)
CGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCC > SRR4302533.4237672/1‑94 (MQ=60)
CTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCG > SRR4302533.532569/1‑94 (MQ=60)
CTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCG < SRR4302533.2321996/94‑1 (MQ=60)
TGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGT > SRR4302533.514569/1‑94 (MQ=60)
TGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGT > SRR4302533.792569/1‑94 (MQ=60)
TTTTTTCAGCGTCGTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTCCGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAG < SRR4302533.742851/94‑1 (MQ=60)
TTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGT < SRR4302533.1156825/94‑1 (MQ=60)
TTTTTCAGCGTCTTGCGCTTACAGGGGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCGTTCCAGCCCGTAGT > SRR4302533.2417141/1‑94 (MQ=60)
TTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTT < SRR4302533.5601075/94‑1 (MQ=60)
TTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTA < SRR4302533.3219377/94‑1 (MQ=60)
TTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAG > SRR4302533.2514816/1‑94 (MQ=60)
TCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC < SRR4302533.185951/94‑1 (MQ=60)
TCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGC < SRR4302533.5196633/94‑1 (MQ=60)
CAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCA > SRR4302533.1764153/1‑94 (MQ=60)
CAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCA < SRR4302533.6021457/94‑1 (MQ=60)
AGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAA < SRR4302533.6092250/94‑1 (MQ=60)
GCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAAT < SRR4302533.4516379/94‑1 (MQ=60)
CGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATG > SRR4302533.2165469/1‑94 (MQ=60)
CGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATG < SRR4302533.2837135/94‑1 (MQ=60)
GTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGA > SRR4302533.2426246/1‑94 (MQ=60)
CTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACC < SRR4302533.4035687/94‑1 (MQ=60)
TTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCG < SRR4302533.3796192/94‑1 (MQ=60)
TTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCG < SRR4302533.2979532/94‑1 (MQ=60)
TGCGCTTACGGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGG < SRR4302533.4907597/94‑1 (MQ=60)
CTTACAGGTGAGACGCTCCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCGGTAGTTAGCAATGACCGGACCG < SRR4302533.4079427/94‑1 (MQ=60)
CTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCG > SRR4302533.3931150/1‑94 (MQ=60)
CTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCG > SRR4302533.3273653/1‑94 (MQ=60)
CTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCG > SRR4302533.4108806/1‑94 (MQ=60)
TTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGA < SRR4302533.1720222/94‑1 (MQ=60)
ACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACA < SRR4302533.1246080/94‑1 (MQ=60)
ACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACA < SRR4302533.6297578/94‑1 (MQ=60)
AGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACAGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACC < SRR4302533.3766805/94‑1 (MQ=60)
TGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGC > SRR4302533.3526601/1‑94 (MQ=60)
GACGCACCTGGATGTCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATC < SRR4302533.1086351/94‑1 (MQ=60)
ACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCG < SRR4302533.3446663/94‑1 (MQ=60)
ACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCG < SRR4302533.2437377/94‑1 (MQ=60)
CGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGA > SRR4302533.1065524/1‑94 (MQ=60)
CGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGA < SRR4302533.4316531/94‑1 (MQ=60)
CACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACA > SRR4302533.2797780/1‑94 (MQ=60)
CACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACA > SRR4302533.1920432/1‑94 (MQ=60)
gccgGGATGGCATCGCCTGGCTTTACGAGTTCGATAAAACGCATGCTGTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAA < SRR4302533.2880655/90‑1 (MQ=60)
ACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAA > SRR4302533.5398738/1‑94 (MQ=60)
CCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAA > SRR4302533.1601371/1‑94 (MQ=60)
CCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAA > SRR4302533.5423746/1‑94 (MQ=60)
TGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACA < SRR4302533.1575244/94‑1 (MQ=60)
GGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAG < SRR4302533.5751634/94‑1 (MQ=60)
GATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGA < SRR4302533.2852197/94‑1 (MQ=60)
GGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCC < SRR4302533.4197191/94‑1 (MQ=60)
CATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC > SRR4302533.1631970/1‑94 (MQ=60)
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TACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGACCCGC > NC_000913/1449708‑1449893
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
