Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,461,874 T→C P104P (CCT→CCC)  b1399 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,461,8740TC99.0% 961.9 / ‑2.9 305P104P (CCT→CCC) b1399hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/3);  new base C (145/157);  total (145/160)
Fisher's exact test for biased strand distribution p-value = 2.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 320 total aligned reads displayed.

CATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461784‑1461963
                                                                                          |                                                                                         
   cGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATg                                                                                      <  1:2792744/93‑1 (MQ=255)
    gggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATgg                                                                                     >  1:610150/1‑93 (MQ=255)
    gggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATgg                                                                                     <  1:7880809/93‑1 (MQ=255)
     ggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATggg                                                                                    >  2:3053051/1‑93 (MQ=255)
      gCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGa                                                                                   >  2:5348860/1‑93 (MQ=255)
         aCGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATgg                                                                                >  2:285538/1‑93 (MQ=255)
         aCGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATgg                                                                                >  2:7990690/1‑93 (MQ=255)
         aCGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATgg                                                                                >  2:2003434/1‑93 (MQ=255)
           ggaGTTTCTATAGCCTCAGTGATAAAGGCTTGCGTCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTa                                                                              <  1:5353922/91‑1 (MQ=255)
           gCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCCTGGGGTGGTa                                                                              >  1:6024877/1‑93 (MQ=255)
           gCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTa                                                                              >  2:8800701/1‑93 (MQ=255)
           gCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTa                                                                              >  2:102192/1‑93 (MQ=255)
           gCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGAAGAGCAACCCGCATGGGATGGTa                                                                              >  1:8067285/1‑93 (MQ=255)
             aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            >  1:9776799/1‑93 (MQ=255)
             aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            <  1:6776217/93‑1 (MQ=255)
             aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            <  1:4949599/93‑1 (MQ=255)
              gTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaag                                                                           >  1:9584472/1‑92 (MQ=255)
               tttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGGCACCCGCATGGGATAGTGAATg                                                                          >  2:3739126/1‑93 (MQ=255)
                ttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATgg                                                                         <  1:557238/93‑1 (MQ=255)
                 tCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGc                                                                        <  1:4139823/93‑1 (MQ=255)
                   tataGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTc                                                                      >  1:3319574/1‑93 (MQ=255)
                   tataGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTc                                                                      >  1:4799272/1‑93 (MQ=255)
                      aGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTg                                                                   <  1:8909065/93‑1 (MQ=255)
                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  >  1:2574243/1‑93 (MQ=255)
                          tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGc                                                               >  1:3295449/1‑93 (MQ=255)
                          tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGc                                                               <  2:6135327/93‑1 (MQ=255)
                           cAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGct                                                              >  1:716141/1‑93 (MQ=255)
                            aGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGctc                                                             >  2:1805523/1‑93 (MQ=255)
                             gTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGctct                                                            >  2:6533392/1‑93 (MQ=255)
                               gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  1:5245332/93‑1 (MQ=255)
                               gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  1:4072606/93‑1 (MQ=255)
                                 tAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGa                                                        >  2:163101/1‑93 (MQ=255)
                                 tAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGa                                                        <  2:8459899/93‑1 (MQ=255)
                                  aaaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGaa                                                       <  1:868939/93‑1 (MQ=255)
                                  aaaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGaa                                                       >  1:3543197/1‑93 (MQ=255)
                                   aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      <  2:1423627/93‑1 (MQ=255)
                                        ttGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTa                                                 <  1:777118/93‑1 (MQ=255)
                                         tGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAg                                                >  1:9071208/1‑93 (MQ=255)
                                            gcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATa                                             <  2:9834329/93‑1 (MQ=255)
                                             ccTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaa                                            >  1:5189947/1‑93 (MQ=255)
                                              cTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaaa                                           <  2:4670340/93‑1 (MQ=255)
                                               tGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAt                                          >  1:4363333/1‑93 (MQ=255)
                                               tGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAt                                          >  1:2136915/1‑93 (MQ=255)
                                                gACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAta                                         >  2:8650971/1‑92 (MQ=255)
                                                gACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATc                                         >  1:3083657/1‑93 (MQ=255)
                                                 aCGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCa                                        <  1:4634358/93‑1 (MQ=255)
                                                  cgcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCaa                                       <  1:2657847/93‑1 (MQ=255)
                                                  cgcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCaa                                       <  2:6354577/93‑1 (MQ=255)
                                                   gcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAc                                      <  2:974131/93‑1 (MQ=255)
                                                     gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:8318541/93‑1 (MQ=255)
                                                     gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    >  1:5884961/1‑93 (MQ=255)
                                                     caCGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:8508020/92‑1 (MQ=255)
                                                      aCGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgct                                   >  1:318269/1‑93 (MQ=255)
                                                       cGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctg                                  >  1:4574175/1‑93 (MQ=255)
                                                        gggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctgg                                 >  1:5385728/1‑93 (MQ=255)
                                                        gggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctgg                                 >  2:5516021/1‑93 (MQ=255)
                                                         ggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggc                                >  1:3737528/1‑93 (MQ=255)
                                                         ggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggc                                >  2:7607850/1‑93 (MQ=255)
                                                         ggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggc                                >  2:3202434/1‑93 (MQ=255)
                                                          gCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggct                               <  2:518400/93‑1 (MQ=255)
                                                            aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             <  1:7561870/93‑1 (MQ=255)
                                                            aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             >  1:7372317/1‑93 (MQ=255)
                                                            aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             <  2:4030722/93‑1 (MQ=255)
                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            >  2:362972/1‑93 (MQ=255)
                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            <  1:7063874/93‑1 (MQ=255)
                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGATTAGATAAATCAACGCTGGCTGAt                            >  2:6660348/1‑93 (MQ=255)
                                                              aaaGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATg                           >  2:5759736/1‑93 (MQ=255)
                                                                aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         <  2:2248665/93‑1 (MQ=255)
                                                                aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         <  2:3318772/93‑1 (MQ=255)
                                                                 gTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCa                        >  1:5741557/1‑93 (MQ=255)
                                                                  tAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaa                       >  2:7341391/1‑93 (MQ=255)
                                                                   aaaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaa                      >  1:7212519/1‑93 (MQ=255)
                                                                    aaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaaa                     <  1:324750/93‑1 (MQ=255)
                                                                    aaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaaa                     >  1:2038839/1‑93 (MQ=255)
                                                                    aaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGATGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaaa                     <  1:10043837/93‑1 (MQ=255)
                                                                       tttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  >  2:2823326/1‑93 (MQ=255)
                                                                       tttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  <  2:1267860/93‑1 (MQ=255)
                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  1:2396024/93‑1 (MQ=255)
                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  1:3890799/93‑1 (MQ=255)
                                                                            cgcgCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTg             >  1:2319340/1‑93 (MQ=255)
                                                                            cgcgCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTg             <  2:3903322/93‑1 (MQ=255)
                                                                            cgcgCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTg             >  1:6302752/1‑93 (MQ=255)
                                                                             gcgcAGTGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            >  2:7207740/1‑93 (MQ=255)
                                                                             gcgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            <  2:7043891/93‑1 (MQ=255)
                                                                             gcgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            <  1:7973448/93‑1 (MQ=255)
                                                                              cgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGAt           <  2:6244637/93‑1 (MQ=255)
                                                                               tcAGAGCAACCCGCCTGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          >  2:3525225/2‑93 (MQ=255)
                                                                               gcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTTAAAAAGCAGTTGATc          >  1:8278586/1‑93 (MQ=255)
                                                                               gcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          <  2:9357578/93‑1 (MQ=255)
                                                                                cAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCt         <  1:1887836/93‑1 (MQ=255)
                                                                                 agagCAACCCGCATGGGGTGGGAAAAGGCTCCTGTTGCTCTCGGAAGGGTTTGATAAATTAACGCTGGCTGATGTTAAAAAAAAGTTGATCTg        >  2:9611264/1‑93 (MQ=255)
                                                                                 agagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTg        >  2:5646339/1‑93 (MQ=255)
                                                                                 agagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTg        <  2:9100821/93‑1 (MQ=255)
                                                                                  gagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCtcg       >  1:8262188/1‑91 (MQ=255)
                                                                                  gagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTgg       >  2:4313776/1‑93 (MQ=255)
                                                                                   agCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGc      >  2:4864842/1‑93 (MQ=255)
                                                                                     cAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCaa    <  2:4484383/93‑1 (MQ=255)
                                                                                      aaCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAg   >  1:149642/1‑93 (MQ=255)
                                                                                       aCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAgg  >  2:106758/1‑93 (MQ=255)
                                                                                       aCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAgg  >  1:9309470/1‑93 (MQ=255)
                                                                                          |                                                                                         
CATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461784‑1461963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTT  >  NC_000913/1461781‑1461967
                                                                                             |                                                                                             
CCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCC                                                                                               >  SRR4302540.4533022/1‑94 (MQ=60)
CCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGGAAAATTTATCGCTCCGAGCAACCC                                                                                               >  SRR4302540.8831991/1‑94 (MQ=60)
 CGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCG                                                                                              >  SRR4302540.4536089/1‑94 (MQ=60)
  GCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGC                                                                                             >  SRR4302540.967477/1‑94 (MQ=60)
   CATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCA                                                                                            <  SRR4302540.1019726/94‑1 (MQ=60)
    ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAT                                                                                           >  SRR4302540.3425302/1‑94 (MQ=60)
    ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAT                                                                                           >  SRR4302540.2657233/1‑94 (MQ=60)
    ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAT                                                                                           <  SRR4302540.2464150/94‑1 (MQ=60)
    ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAT                                                                                           <  SRR4302540.8849237/94‑1 (MQ=60)
    ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAT                                                                                           >  SRR4302540.9145689/1‑94 (MQ=60)
     TCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATG                                                                                          <  SRR4302540.4406306/94‑1 (MQ=60)
      CGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGG                                                                                         <  SRR4302540.2822894/94‑1 (MQ=60)
      CGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGG                                                                                         >  SRR4302540.616671/1‑94 (MQ=60)
       GGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGG                                                                                        <  SRR4302540.7972836/94‑1 (MQ=60)
         GCGACGCAGTTGCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGAT                                                                                      <  SRR4302540.4623901/94‑1 (MQ=60)
          CGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATG                                                                                     >  SRR4302540.5970837/1‑94 (MQ=60)
          CGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATG                                                                                     >  SRR4302540.4015199/1‑94 (MQ=60)
           GACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGG                                                                                    <  SRR4302540.6897029/94‑1 (MQ=60)
             CGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGGGCAACCCGCATGGGGTGGTA                                                                                  >  SRR4302540.7687435/1‑94 (MQ=60)
             CGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCCTGGGGTGGTA                                                                                  >  SRR4302540.6091730/1‑94 (MQ=60)
             CGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGAAGAGCAACCCGCATGGGATGGTA                                                                                  >  SRR4302540.8160896/1‑94 (MQ=60)
              GGAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGTCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAA                                                                                 <  SRR4302540.5412706/94‑1 (MQ=60)
               CAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAA                                                                                >  SRR4302540.9891402/1‑94 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               <  SRR4302540.6159160/94‑1 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               >  SRR4302540.3254470/1‑94 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               <  SRR4302540.3415196/94‑1 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               <  SRR4302540.6851113/94‑1 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               <  SRR4302540.2614546/94‑1 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAT                                                                               <  SRR4302540.5003066/94‑1 (MQ=60)
                AGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAG                                                                               >  SRR4302540.9697627/1‑94 (MQ=60)
                 GTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATG                                                                              <  SRR4302540.3830794/94‑1 (MQ=60)
                 GTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATG                                                                              >  SRR4302540.6312743/1‑94 (MQ=60)
                 GTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATG                                                                              <  SRR4302540.2091346/94‑1 (MQ=60)
                 GTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGCAAATG                                                                              >  SRR4302540.6147887/1‑94 (MQ=60)
                   TTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGC                                                                            <  SRR4302540.563307/94‑1 (MQ=60)
                    TCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCT                                                                           <  SRR4302540.4184621/94‑1 (MQ=60)
                    TCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCT                                                                           >  SRR4302540.3405396/1‑94 (MQ=60)
                     CTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTC                                                                          <  SRR4302540.2712088/94‑1 (MQ=60)
                     CTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTC                                                                          >  SRR4302540.5206648/1‑94 (MQ=60)
                     CTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTC                                                                          >  SRR4302540.4850635/1‑94 (MQ=60)
                     CTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTC                                                                          >  SRR4302540.3355987/1‑94 (MQ=60)
                      TATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCC                                                                         >  SRR4302540.7870043/1‑94 (MQ=60)
                       ATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCT                                                                        >  SRR4302540.4513270/1‑94 (MQ=60)
                        TAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTG                                                                       <  SRR4302540.5921724/94‑1 (MQ=60)
                         AGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGT                                                                      <  SRR4302540.4179824/94‑1 (MQ=60)
                         AGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGT                                                                      >  SRR4302540.2601990/1‑94 (MQ=60)
                         AGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGT                                                                      <  SRR4302540.936295/94‑1 (MQ=60)
                         AGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGT                                                                      <  SRR4302540.9012229/94‑1 (MQ=60)
                          GCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTT                                                                     <  SRR4302540.8325869/94‑1 (MQ=60)
                          GCCTCAGTGATAAAGGCGTGCGCGTGACGCGACGGGCAGAAAGGAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTT                                                                     <  SRR4302540.4484954/94‑1 (MQ=60)
                           CCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTG                                                                    >  SRR4302540.1172726/1‑94 (MQ=60)
                            CTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGC                                                                   >  SRR4302540.3331513/1‑94 (MQ=60)
                            CTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGC                                                                   >  SRR4302540.817180/1‑94 (MQ=60)
                             TCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCT                                                                  >  SRR4302540.723826/1‑94 (MQ=60)
                             TCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCT                                                                  >  SRR4302540.7277280/1‑94 (MQ=60)
                             TCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCT                                                                  >  SRR4302540.9851183/1‑94 (MQ=60)
                               AGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCT                                                                <  SRR4302540.5203073/94‑1 (MQ=60)
                               AGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCT                                                                <  SRR4302540.917335/94‑1 (MQ=60)
                                GTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTC                                                               <  SRR4302540.9039601/94‑1 (MQ=60)
                                GTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTC                                                               >  SRR4302540.8371116/1‑94 (MQ=60)
                                GTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTC                                                               >  SRR4302540.2047067/1‑94 (MQ=60)
                                GTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGAAAATGGCTCCTGTTGCTCTC                                                               >  SRR4302540.8371115/1‑94 (MQ=60)
                                 TGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCG                                                              >  SRR4302540.7918438/1‑94 (MQ=60)
                                 TGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCG                                                              >  SRR4302540.6632471/1‑94 (MQ=60)
                                  GATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGG                                                             <  SRR4302540.4116505/94‑1 (MQ=60)
                                  GATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGG                                                             <  SRR4302540.7191974/94‑1 (MQ=60)
                                  GATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGG                                                             <  SRR4302540.5302537/94‑1 (MQ=60)
                                    TAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAA                                                           >  SRR4302540.3581898/1‑94 (MQ=60)
                                     AAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAG                                                          >  SRR4302540.4980553/1‑94 (MQ=60)
                                     AAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAG                                                          <  SRR4302540.878159/94‑1 (MQ=60)
                                      AAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGATCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGG                                                         <  SRR4302540.6324943/94‑1 (MQ=60)
                                       AGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGT                                                        >  SRR4302540.3961629/1‑94 (MQ=60)
                                        GGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTT                                                       >  SRR4302540.5436216/1‑94 (MQ=60)
                                         GCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTT                                                      <  SRR4302540.7599813/94‑1 (MQ=60)
                                           TTGCGCGTGACGCTACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTGCTGTTGCTCTCGGAAGGTTTAG                                                    <  SRR4302540.1782728/94‑1 (MQ=60)
                                           TTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAG                                                    <  SRR4302540.2418133/94‑1 (MQ=60)
                                           TTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAG                                                    <  SRR4302540.785372/94‑1 (MQ=60)
                                           TTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAG                                                    >  SRR4302540.9180148/1‑94 (MQ=60)
                                             GCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGAT                                                  >  SRR4302540.1947041/1‑94 (MQ=60)
                                               GCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAA                                                >  SRR4302540.5246446/1‑94 (MQ=60)
                                                CCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAA                                               >  SRR4302540.7428990/1‑94 (MQ=60)
                                                 CTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAT                                              >  SRR4302540.2159867/1‑94 (MQ=60)
                                                 CTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAAT                                              >  SRR4302540.4410768/1‑94 (MQ=60)
                                                  TGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATC                                             >  SRR4302540.3117490/1‑94 (MQ=60)
                                                    ACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAA                                           <  SRR4302540.4683979/94‑1 (MQ=60)
                                                     CGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAC                                          <  SRR4302540.2686692/94‑1 (MQ=60)
                                                     CGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAC                                          <  SRR4302540.2949176/94‑1 (MQ=60)
                                                     CGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAC                                          <  SRR4302540.4758816/94‑1 (MQ=60)
                                                      GCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACG                                         <  SRR4302540.2140060/94‑1 (MQ=60)
                                                      GCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACG                                         <  SRR4302540.8028033/94‑1 (MQ=60)
                                                       CGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGC                                        >  SRR4302540.5949981/1‑94 (MQ=60)
                                                        GACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCT                                       >  SRR4302540.321448/1‑94 (MQ=60)
                                                        GACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCT                                       <  SRR4302540.5417340/94‑1 (MQ=60)
                                                        GACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCT                                       <  SRR4302540.7592071/94‑1 (MQ=60)
                                                         ACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTG                                      <  SRR4302540.8251120/94‑1 (MQ=60)
                                                         ACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTG                                      >  SRR4302540.4623524/1‑94 (MQ=60)
                                                         ACCGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTG                                      <  SRR4302540.4235709/94‑1 (MQ=60)
                                                          CGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGG                                     >  SRR4302540.5444965/1‑94 (MQ=60)
                                                          CGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGG                                     >  SRR4302540.5700011/1‑94 (MQ=60)
                                                          CGGGCAGAAAATAAAATTTATCGCGCAGAGCATCCCGCATGGGATGGTAACTGGCTCCTGTTGCTCTCGGAAGGCTTAGATAAATAAACGCTGG                                     <  SRR4302540.5356828/94‑1 (MQ=60)
                                                           GGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGC                                    >  SRR4302540.681871/1‑94 (MQ=60)
                                                           GGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGC                                    >  SRR4302540.3778304/1‑94 (MQ=60)
                                                            GGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCT                                   >  SRR4302540.4221973/1‑94 (MQ=60)
                                                            GGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCT                                   <  SRR4302540.5990027/94‑1 (MQ=60)
                                                              CAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGA                                 >  SRR4302540.5336222/1‑94 (MQ=60)
                                                              CAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGA                                 >  SRR4302540.7454494/1‑94 (MQ=60)
                                                              CAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGA                                 >  SRR4302540.7445750/1‑94 (MQ=60)
                                                              CAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGA                                 >  SRR4302540.5750376/1‑94 (MQ=60)
                                                               AGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAT                                <  SRR4302540.7646686/94‑1 (MQ=60)
                                                               AGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAT                                >  SRR4302540.806915/1‑94 (MQ=60)
                                                               AGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAT                                <  SRR4302540.3337934/94‑1 (MQ=60)
                                                               AGAAAGTAAAATTTATCGCGCAGACCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAT                                <  SRR4302540.414824/94‑1 (MQ=60)
                                                               AGAAAGTAAAAGTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAT                                <  SRR4302540.3337933/94‑1 (MQ=60)
                                                                GAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTTGATAAATCAACGCTGGCTGATG                               >  SRR4302540.6525999/1‑94 (MQ=60)
                                                                GAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATG                               <  SRR4302540.7142436/94‑1 (MQ=60)
                                                                 AAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGT                              <  SRR4302540.3794743/94‑1 (MQ=60)
                                                                 AAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGT                              <  SRR4302540.8672944/94‑1 (MQ=60)
                                                                  AATTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTC                             <  SRR4302540.3233044/94‑1 (MQ=60)
                                                                  AAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTC                             <  SRR4302540.2199776/94‑1 (MQ=60)
                                                                  AAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTC                             >  SRR4302540.551250/1‑94 (MQ=60)
                                                                  AAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTC                             <  SRR4302540.2199779/94‑1 (MQ=60)
                                                                   AGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCA                            <  SRR4302540.3295712/94‑1 (MQ=60)
                                                                   AGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCA                            <  SRR4302540.8518236/94‑1 (MQ=60)
                                                                   AGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCA                            >  SRR4302540.5804848/1‑94 (MQ=60)
                                                                   AGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCA                            <  SRR4302540.7287385/94‑1 (MQ=60)
                                                                    GTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAA                           <  SRR4302540.8085399/94‑1 (MQ=60)
                                                                    GTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAA                           >  SRR4302540.7999558/1‑94 (MQ=60)
                                                                    GTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAA                           >  SRR4302540.7764692/1‑94 (MQ=60)
                                                                     TAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAA                          >  SRR4302540.7292923/1‑94 (MQ=60)
                                                                      AAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAA                         >  SRR4302540.2060813/1‑94 (MQ=60)
                                                                       AAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAA                        <  SRR4302540.2381773/94‑1 (MQ=60)
                                                                       AAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAA                        <  SRR4302540.328003/94‑1 (MQ=60)
                                                                       AAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGATGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAA                        <  SRR4302540.10160606/94‑1 (MQ=60)
                                                                        AATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAG                       >  SRR4302540.5921236/1‑94 (MQ=60)
                                                                        AATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAG                       <  SRR4302540.5281295/94‑1 (MQ=60)
                                                                         ATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGC                      >  SRR4302540.2470452/1‑94 (MQ=60)
                                                                           TTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAG                    <  SRR4302540.5761411/94‑1 (MQ=60)
                                                                           TTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAG                    <  SRR4302540.5299518/94‑1 (MQ=60)
                                                                             ATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTT                  <  SRR4302540.5472707/94‑1 (MQ=60)
                                                                             ATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTT                  <  SRR4302540.5083784/94‑1 (MQ=60)
                                                                             ATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTT                  >  SRR4302540.7164634/1‑94 (MQ=60)
                                                                              TCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTG                 >  SRR4302540.6372940/1‑94 (MQ=60)
                                                                              TCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTG                 <  SRR4302540.3933043/94‑1 (MQ=60)
                                                                              TCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTG                 <  SRR4302540.2421844/94‑1 (MQ=60)
                                                                              TCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTG                 <  SRR4302540.2271707/94‑1 (MQ=60)
                                                                              TCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTG                 >  SRR4302540.2344306/1‑94 (MQ=60)
                                                                                GCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGAT               <  SRR4302540.8066346/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGTTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              <  SRR4302540.7582891/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTTAAAAAGCAGTTGATC              >  SRR4302540.8374741/1‑94 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              <  SRR4302540.3304905/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              <  SRR4302540.4723655/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              <  SRR4302540.4679760/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              <  SRR4302540.8967073/94‑1 (MQ=60)
                                                                                 CGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATC              >  SRR4302540.3179242/1‑94 (MQ=60)
                                                                                  GCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCT             <  SRR4302540.9459408/94‑1 (MQ=60)
                                                                                   CAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGGAGGGTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGAGCTG            >  SRR4302540.4899895/1‑94 (MQ=60)
                                                                                   CAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTG            <  SRR4302540.1908502/94‑1 (MQ=60)
                                                                                   CAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGCTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTG            >  SRR4302540.9872885/1‑94 (MQ=60)
                                                                                    AGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGG           >  SRR4302540.9905002/1‑94 (MQ=60)
                                                                                    AGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGG           <  SRR4302540.7112175/94‑1 (MQ=60)
                                                                                    AGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTCG           >  SRR4302540.8358198/1‑94 (MQ=60)
                                                                                     GAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGC          >  SRR4302540.372554/1‑94 (MQ=60)
                                                                                      AGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCA         >  SRR4302540.3217057/1‑94 (MQ=60)
                                                                                       GCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAA        >  SRR4302540.1660797/1‑94 (MQ=60)
                                                                                        CAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAG       >  SRR4302540.151187/1‑94 (MQ=60)
                                                                                         AACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG      >  SRR4302540.2949738/1‑94 (MQ=60)
                                                                                         AACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG      >  SRR4302540.9420616/1‑94 (MQ=60)
                                                                                         AACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG      >  SRR4302540.9281297/1‑94 (MQ=60)
                                                                                         AACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG      <  SRR4302540.3114528/94‑1 (MQ=60)
                                                                                         AACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG      >  SRR4302540.2820847/1‑94 (MQ=60)
                                                                                          ACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGT     >  SRR4302540.7930808/1‑94 (MQ=60)
                                                                                          ACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGT     >  SRR4302540.1933046/1‑94 (MQ=60)
                                                                                          ACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGT     >  SRR4302540.7429013/1‑94 (MQ=60)
                                                                                            CCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTT   <  SRR4302540.6566767/94‑1 (MQ=60)
                                                                                            CCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTT   >  SRR4302540.8262877/1‑94 (MQ=60)
                                                                                            CCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTT   <  SRR4302540.4616921/94‑1 (MQ=60)
                                                                                            CCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTT   <  SRR4302540.4616922/94‑1 (MQ=60)
                                                                                             CGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTT  >  SRR4302540.1134710/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTT  >  NC_000913/1461781‑1461967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑