Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC > NC_000913/1461979‑1462165
|
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAG < SRR4302540.7924202/94‑1 (MQ=60)
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAG > SRR4302540.1061375/1‑94 (MQ=60)
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAG > SRR4302540.1763585/1‑94 (MQ=60)
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAA > SRR4302540.3349958/1‑94 (MQ=60)
CCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAG < SRR4302540.7874163/94‑1 (MQ=60)
CCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGTAGC > SRR4302540.6073305/1‑94 (MQ=60)
GCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCA < SRR4302540.9882658/94‑1 (MQ=60)
GCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCA < SRR4302540.2180102/94‑1 (MQ=60)
GCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCA > SRR4302540.59884/1‑94 (MQ=60)
CCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAA > SRR4302540.2908412/1‑94 (MQ=60)
CCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAA > SRR4302540.5027738/1‑94 (MQ=60)
CCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAA < SRR4302540.543361/94‑1 (MQ=60)
CTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAA > SRR4302540.4657289/1‑94 (MQ=60)
CTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAA > SRR4302540.4657288/1‑94 (MQ=60)
CTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCCAA > SRR4302540.9648394/1‑94 (MQ=60)
CTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAA < SRR4302540.10056777/94‑1 (MQ=60)
CTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAA < SRR4302540.7216470/94‑1 (MQ=60)
CGATGGCAGCCCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAAT < SRR4302540.2213695/94‑1 (MQ=60)
GATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATA < SRR4302540.9012968/94‑1 (MQ=60)
ATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTTAAGCGCAAATAC < SRR4302540.3334941/94‑1 (MQ=60)
ATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATAC < SRR4302540.5823326/94‑1 (MQ=60)
TGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACC < SRR4302540.7077417/94‑1 (MQ=60)
GGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCA < SRR4302540.8291317/94‑1 (MQ=60)
GGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCA < SRR4302540.6206559/94‑1 (MQ=60)
GGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCA < SRR4302540.7423311/94‑1 (MQ=60)
GGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCA < SRR4302540.1171694/94‑1 (MQ=60)
GCAGCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCAC < SRR4302540.539067/94‑1 (MQ=60)
CATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACT < SRR4302540.5336154/94‑1 (MQ=60)
ATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTG > SRR4302540.3375592/1‑94 (MQ=60)
TCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGG < SRR4302540.366699/94‑1 (MQ=60)
CGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCCAATACCACTGGC > SRR4302540.612653/1‑94 (MQ=60)
CGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGC < SRR4302540.9483678/94‑1 (MQ=60)
CGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTCGAAGCGCAAATACCACTGGC < SRR4302540.7277624/94‑1 (MQ=60)
CGCCGTCGCAAAAACTGGCCGATGTACAGACACTTGTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGC < SRR4302540.5152972/94‑1 (MQ=60)
GCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCG < SRR4302540.5986769/94‑1 (MQ=60)
CGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCT < SRR4302540.6800076/94‑1 (MQ=60)
CGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCT < SRR4302540.1459814/94‑1 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTT < SRR4302540.672228/94‑1 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTT > SRR4302540.6455266/1‑94 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTT > SRR4302540.10008782/1‑94 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAAAACCACTCGCGCTT > SRR4302540.8419260/1‑94 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTT < SRR4302540.103284/94‑1 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTT > SRR4302540.6234957/1‑94 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTT > SRR4302540.8499806/1‑94 (MQ=60)
GTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGCGTGGCTGATAACGGGAATTGTTTTTAGGCGCAAATCGCACTCGCGCTT > SRR4302540.8419261/1‑94 (MQ=57)
TCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTT < SRR4302540.8486869/94‑1 (MQ=60)
TCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTT < SRR4302540.7288094/94‑1 (MQ=60)
TCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTT < SRR4302540.8813211/94‑1 (MQ=60)
CGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAAGGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTC > SRR4302540.7659435/1‑94 (MQ=60)
CGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTC < SRR4302540.6618990/94‑1 (MQ=60)
CGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTC > SRR4302540.7371020/1‑94 (MQ=60)
GCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCT < SRR4302540.1271558/94‑1 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTC > SRR4302540.8155607/1‑94 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTC > SRR4302540.5519880/1‑94 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTC < SRR4302540.887540/94‑1 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTAATTTGTTTTGAGGCGCAAATACCCCTGGCGCTTTCTC < SRR4302540.5340620/94‑1 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCG > SRR4302540.436723/1‑94 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCG > SRR4302540.9629020/1‑94 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCG < SRR4302540.755237/94‑1 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGAGAACGCGATTTGTTTTGAGGCGCAAATACGACTGCCGCGTTCTTG > SRR4302540.436724/1‑94 (MQ=60)
AAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGC > SRR4302540.1258910/1‑94 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAG > SRR4302540.3356859/1‑94 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAG > SRR4302540.1061461/1‑94 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAG < SRR4302540.3205026/94‑1 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAG < SRR4302540.734333/94‑1 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAG < SRR4302540.443935/94‑1 (MQ=60)
GGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCA < SRR4302540.288350/94‑1 (MQ=60)
GGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCA > SRR4302540.2912181/1‑94 (MQ=60)
GCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCAC < SRR4302540.2367984/94‑1 (MQ=60)
GCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCAC < SRR4302540.1005068/94‑1 (MQ=60)
CGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTG > SRR4302540.1512520/1‑94 (MQ=60)
CGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTG < SRR4302540.2025120/94‑1 (MQ=60)
CGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGAACTG > SRR4302540.4334708/1‑94 (MQ=60)
GATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGC < SRR4302540.4422709/94‑1 (MQ=60)
GATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGC > SRR4302540.5818935/1‑94 (MQ=60)
ATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCG > SRR4302540.4003130/1‑94 (MQ=60)
TGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGT < SRR4302540.5163628/94‑1 (MQ=60)
TGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGT < SRR4302540.3545154/94‑1 (MQ=60)
TGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGT > SRR4302540.8756293/1‑94 (MQ=60)
ACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCC > SRR4302540.3873099/1‑94 (MQ=60)
ACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCC > SRR4302540.2293729/1‑94 (MQ=60)
ACAGACACTATTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCC < SRR4302540.6743830/94‑1 (MQ=60)
CAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCA > SRR4302540.7633810/1‑94 (MQ=60)
CAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCA > SRR4302540.1564949/1‑94 (MQ=60)
GACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGA > SRR4302540.7606914/1‑94 (MQ=60)
GACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGA < SRR4302540.9995789/94‑1 (MQ=60)
ACCCTGTTGCATGAAGCTGGTGTGGTGGATAGCGTTATTTGTTTTGAGGCGCAAATACCACTGGCGCTTGCTCGCGCAGCACTGCGTGCCAGAG < SRR4302540.3267947/94‑1 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG > SRR4302540.10154315/1‑94 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG < SRR4302540.5166365/94‑1 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG < SRR4302540.1864059/94‑1 (MQ=60)
ACTTTTGCATGAAGCGGGGGGGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCGAGAGGA > SRR4302540.2105556/1‑94 (MQ=60)
TTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAA > SRR4302540.6173613/1‑94 (MQ=60)
TTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAG < SRR4302540.3027635/94‑1 (MQ=60)
TGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGA < SRR4302540.7815158/94‑1 (MQ=60)
GCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAG < SRR4302540.5818075/94‑1 (MQ=60)
GCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAG < SRR4302540.4136608/94‑1 (MQ=60)
CATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGT < SRR4302540.8083722/94‑1 (MQ=60)
ATGAAGCGGGTGTGGCGGATCACGTGCTTTGTTTTGAGGAGCAAATACCACCGGCGCTTTCTCGCGCAGCCCATCGGGCCAGAGTCGAAGAGTG > SRR4302540.754934/1‑94 (MQ=44)
ATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGCAGAGTG > SRR4302540.7034768/1‑94 (MQ=60)
ATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTG > SRR4302540.9952456/1‑94 (MQ=60)
GAAGCGGGTGTGGCGGATAACGTGACTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCT > SRR4302540.2381655/1‑94 (MQ=60)
AGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG < SRR4302540.7714529/94‑1 (MQ=60)
CGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCCTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCA > SRR4302540.8093079/1‑94 (MQ=60)
CGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCT > SRR4302540.5287681/1‑94 (MQ=60)
GGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAT < SRR4302540.5193494/94‑1 (MQ=60)
GGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAT > SRR4302540.3842277/1‑94 (MQ=60)
GGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAT > SRR4302540.6642862/1‑94 (MQ=60)
GGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATT < SRR4302540.7409556/94‑1 (MQ=60)
GGGTGGCGGAT‑ACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTA < SRR4302540.5576778/94‑1 (MQ=60)
TGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTA < SRR4302540.3086551/94‑1 (MQ=60)
TGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTA > SRR4302540.1150080/1‑94 (MQ=60)
GGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTA < SRR4302540.3086261/94‑1 (MQ=60)
TGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAAC < SRR4302540.2010821/94‑1 (MQ=60)
TGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAAC < SRR4302540.3612990/94‑1 (MQ=60)
TGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAAC < SRR4302540.3612989/94‑1 (MQ=60)
TGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAAC < SRR4302540.6467877/94‑1 (MQ=60)
GGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACT > SRR4302540.2363446/1‑94 (MQ=60)
GCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTG < SRR4302540.7862106/94‑1 (MQ=60)
GCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTG < SRR4302540.5744099/94‑1 (MQ=60)
GCGGAGAACGTGATGTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTG < SRR4302540.5744098/94‑1 (MQ=60)
CGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGA > SRR4302540.8774989/1‑94 (MQ=60)
CGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCNCGCGCAGCACNNCGTGCCAGAntnnnngangnctngcntnnancnnn > SRR4302540.2080951/1‑68 (MQ=60)
CGGATAACGGGATTTGTTTTGACGCGCAAATACCACTGGCGCTTTCTCGCGCAGCCCTGCGTGCCAGAGTCGCAGAGTCCTGGCATTTAACTGA > SRR4302540.8774987/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302540.5961132/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA < SRR4302540.2401783/94‑1 (MQ=60)
GGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302540.3881706/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302540.8270209/1‑94 (MQ=60)
GATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAAC > SRR4302540.3430218/1‑94 (MQ=60)
GATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAAC > SRR4302540.4545311/1‑94 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302540.740631/94‑1 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA > SRR4302540.6993341/1‑94 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCAAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302540.3097883/94‑1 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGATTTCTAGCGCAGCACTGCCGCCCAGAGAAGAAGAGTGCTCGCATTTAACTGCACA > SRR4302540.388141/1‑94 (MQ=55)
ATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302540.7526710/94‑1 (MQ=60)
ATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA > SRR4302540.6027282/1‑94 (MQ=60)
TAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAA < SRR4302540.8324866/94‑1 (MQ=60)
TAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAA > SRR4302540.2227700/1‑94 (MQ=60)
AACGTGATTTGTTTTGAAGCGCAAATACCACTTGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAA > SRR4302540.1319428/1‑94 (MQ=60)
AACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAA > SRR4302540.5872076/1‑94 (MQ=60)
ACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAA > SRR4302540.7760474/1‑94 (MQ=60)
ACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAA > SRR4302540.1417738/1‑94 (MQ=60)
ACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAA > SRR4302540.8906087/1‑94 (MQ=60)
ACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAA > SRR4302540.5615829/1‑94 (MQ=60)
CGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAAT > SRR4302540.7266023/1‑94 (MQ=60)
GTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATG < SRR4302540.8825434/94‑1 (MQ=60)
GTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATG < SRR4302540.3964780/94‑1 (MQ=60)
TGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGC > SRR4302540.8036100/1‑94 (MQ=60)
GATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCC > SRR4302540.3168691/1‑94 (MQ=60)
ATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCA > SRR4302540.6286802/1‑94 (MQ=60)
ATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCA < SRR4302540.9567206/94‑1 (MQ=60)
ATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCA < SRR4302540.9567207/94‑1 (MQ=60)
TTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAT < SRR4302540.2527236/94‑1 (MQ=60)
TTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAT < SRR4302540.10041338/94‑1 (MQ=60)
TTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAT < SRR4302540.1370468/94‑1 (MQ=60)
TTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAT > SRR4302540.4756290/1‑94 (MQ=60)
TTTTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATG < SRR4302540.5407553/94‑1 (MQ=60)
TTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATG < SRR4302540.2376493/94‑1 (MQ=60)
TTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATG < SRR4302540.5407554/94‑1 (MQ=60)
TTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTA < SRR4302540.803021/94‑1 (MQ=60)
GTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTA < SRR4302540.7969426/94‑1 (MQ=60)
GTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTA < SRR4302540.7969429/94‑1 (MQ=60)
GTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTA < SRR4302540.6718512/94‑1 (MQ=60)
TTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTAC < SRR4302540.4730592/94‑1 (MQ=60)
TTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTAC < SRR4302540.6605917/94‑1 (MQ=60)
TTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTCACTGAACAAAATGCCATGTACG < SRR4302540.1865633/94‑1 (MQ=60)
TTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGA > SRR4302540.9278385/1‑94 (MQ=60)
AAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAAC < SRR4302540.131511/94‑1 (MQ=60)
GGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC < SRR4302540.2162001/94‑1 (MQ=60)
GGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC < SRR4302540.1230031/94‑1 (MQ=60)
GGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC < SRR4302540.6733990/94‑1 (MQ=60)
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ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC > NC_000913/1461979‑1462165
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
