Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,462,072 |
A→G |
E170E (GAA→GAG) |
b1399 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,462,072 | 0 | A | G | 99.6%
| 689.9
/ NA
| 223 | E170E (GAA→GAG) | b1399 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (107/114); total (109/114) |
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 229 total aligned reads displayed.
CAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAA > NC_000913/1461982‑1462162
|
cAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGgc > 2:2148954/1‑93 (MQ=255)
gCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGgcgc > 2:4915066/1‑93 (MQ=255)
cTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGCCACTTTTGCATGAAGCGGGGGTGGCGGATAACGTGATTTGTTTTGTGGCGCaa > 2:6023082/1‑93 (MQ=255)
tGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCaaa < 2:1856500/93‑1 (MQ=255)
gATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAAt > 1:370381/1‑93 (MQ=255)
aTGGCATCGCCGTCGCAAAAACTGGCTGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATa < 1:2440080/93‑1 (MQ=255)
aTGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATa > 2:353522/1‑93 (MQ=255)
tGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAc < 2:2370039/93‑1 (MQ=255)
tGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAc < 2:5695990/93‑1 (MQ=255)
ggCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAcc > 1:2232952/1‑93 (MQ=255)
gCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCa < 2:3686846/93‑1 (MQ=255)
aTCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACt < 1:516522/93‑1 (MQ=255)
aTCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACt > 2:3420537/1‑93 (MQ=255)
aTCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACt > 1:1180481/1‑93 (MQ=255)
aTCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACt > 2:1711958/1‑93 (MQ=255)
tCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAACACTg > 1:695855/1‑93 (MQ=255)
cGCCGTCGTAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTgg < 1:4203721/93‑1 (MQ=255)
cGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTgg < 1:4282081/93‑1 (MQ=255)
gTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCt > 2:4835267/1‑93 (MQ=255)
cGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCttt < 2:813657/93‑1 (MQ=255)
cGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCttt < 1:4506191/93‑1 (MQ=255)
cGCAAAAACTGGCAGATGTACAGACACTGTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCttt < 2:3213161/93‑1 (MQ=255)
gCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTtc > 2:2229054/1‑93 (MQ=255)
cAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTtct > 2:1193549/1‑93 (MQ=255)
cAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTtct > 1:2488022/1‑93 (MQ=255)
aaaaCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTcg < 2:2093828/93‑1 (MQ=255)
aaaaCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTcg > 1:4836737/1‑93 (MQ=255)
aaaCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTcgc < 1:4058961/93‑1 (MQ=255)
aaaCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTcgc > 1:4067702/1‑93 (MQ=255)
aCTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCgcgc > 2:3838749/1‑93 (MQ=255)
cTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCgca < 1:3191761/93‑1 (MQ=255)
gCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCgcagca > 1:6146498/1‑93 (MQ=255)
cGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACt < 2:1619626/93‑1 (MQ=255)
cGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACt < 2:2869589/93‑1 (MQ=255)
gATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTg < 2:437139/93‑1 (MQ=255)
gATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTg > 2:4077681/1‑93 (MQ=255)
gATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTg > 2:2676545/1‑93 (MQ=255)
aTGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGc > 2:32579/1‑93 (MQ=255)
tGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCg > 2:6285744/1‑93 (MQ=255)
tGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCg < 2:3311057/93‑1 (MQ=255)
gTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGt > 2:3939838/1‑93 (MQ=255)
tACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTg < 1:5518142/93‑1 (MQ=255)
tACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGCGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTg > 1:2835094/1‑93 (MQ=255)
gaCAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTg < 1:5807615/92‑1 (MQ=255)
acacTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCaga < 2:5363066/93‑1 (MQ=255)
acacTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCaga < 1:3515198/93‑1 (MQ=255)
acTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGATGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGGCAGAGt > 2:2564057/1‑93 (MQ=255)
acTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGGCAGAGt > 2:2417268/1‑93 (MQ=255)
acTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGt < 2:35798/93‑1 (MQ=255)
acTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGt > 2:5919913/1‑93 (MQ=255)
cTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTa < 1:6245105/93‑1 (MQ=255)
cTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTa < 1:2238761/93‑1 (MQ=255)
cTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTa < 2:5540824/93‑1 (MQ=255)
ttttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTag < 2:2970273/93‑1 (MQ=255)
ttttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTag > 1:1012488/1‑93 (MQ=255)
ttttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTag > 2:1081967/1‑93 (MQ=255)
tttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTaga < 2:4091249/93‑1 (MQ=255)
ttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTagaa < 2:4006608/93‑1 (MQ=255)
ttGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTagaa < 1:1246032/93‑1 (MQ=255)
gCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTagaaga < 2:3359512/93‑1 (MQ=255)
gCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTagaaga < 1:5964259/93‑1 (MQ=255)
cATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAagag > 2:5969045/1‑93 (MQ=255)
aTGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGt > 1:1580625/1‑93 (MQ=255)
aTGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGt < 2:4321658/93‑1 (MQ=255)
aTGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGt < 2:4613303/93‑1 (MQ=255)
gCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTgg > 2:5414709/1‑93 (MQ=255)
gggTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCa > 1:4132766/1‑93 (MQ=255)
gggTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCa > 1:4811557/1‑93 (MQ=255)
ggTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAt > 1:3448054/1‑93 (MQ=255)
gtgtGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAtt < 2:2659009/93‑1 (MQ=255)
gtgtGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAtt < 2:579426/93‑1 (MQ=255)
tgtgGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAttt < 1:771762/93‑1 (MQ=255)
tgtgGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAttt > 1:1473145/1‑93 (MQ=255)
gtgGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTa > 2:4980793/1‑93 (MQ=255)
tgGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTaa < 1:5630025/93‑1 (MQ=255)
tgGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTaa > 2:5068852/1‑93 (MQ=255)
ggATAACGTGATTTGTTTTGAGGCGCAAATGCCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGa < 1:613106/93‑1 (MQ=255)
ggATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGa < 1:2091785/93‑1 (MQ=255)
ggATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGa > 1:2949711/1‑93 (MQ=255)
gATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGaa > 1:2595571/1‑93 (MQ=255)
gATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGaa > 1:991614/1‑93 (MQ=255)
aTAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAAc < 1:2009736/93‑1 (MQ=255)
aTAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAAc < 1:2862814/93‑1 (MQ=255)
cGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACaaaa < 1:108998/93‑1 (MQ=255)
cGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACaaaa < 1:5436482/93‑1 (MQ=255)
cGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACaaaa > 2:1403682/1‑93 (MQ=255)
cGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACaaaa > 1:3811459/1‑93 (MQ=255)
aTTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGcc > 2:2759333/1‑93 (MQ=255)
tttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCa > 1:3047372/1‑93 (MQ=255)
tttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCa < 2:1584970/93‑1 (MQ=255)
tttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCa < 2:3041120/93‑1 (MQ=255)
tttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCa > 2:3733995/1‑93 (MQ=255)
ttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAt < 2:5649564/93‑1 (MQ=255)
ttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAt < 2:5759683/93‑1 (MQ=255)
ttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAt < 2:1295979/93‑1 (MQ=255)
ttGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAt > 1:4417082/1‑93 (MQ=255)
ttttGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTa < 1:5261592/93‑1 (MQ=255)
tttGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTAc > 1:1680890/1‑93 (MQ=255)
tGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGa < 2:1689361/93‑1 (MQ=255)
gAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGaa > 2:6244185/1‑93 (MQ=255)
|
CAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAA > NC_000913/1461982‑1462162
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC > NC_000913/1461979‑1462165
|
ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAG < SRR4302533.6266967/94‑1 (MQ=60)
AGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGC > SRR4302533.4247374/1‑94 (MQ=60)
CCTGATGGCATCGCCTTCGCAAAAACTGGCCGATGTACAGACACTATTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAA < SRR4302533.4096902/94‑1 (MQ=60)
CCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAA > SRR4302533.1394458/1‑94 (MQ=60)
TGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAAT > SRR4302533.372618/1‑94 (MQ=60)
ATGGCATCGCCGTCGCAAAAACTGGCTGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAC < SRR4302533.2455148/94‑1 (MQ=60)
TGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACC > SRR4302533.2246730/1‑94 (MQ=60)
GCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCAC < SRR4302533.3663318/94‑1 (MQ=60)
CATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACT > SRR4302533.1187572/1‑94 (MQ=60)
CATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACT > SRR4302533.5510272/1‑94 (MQ=60)
ATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTG < SRR4302533.647531/94‑1 (MQ=60)
ATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTG < SRR4302533.519587/94‑1 (MQ=60)
ATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATAACACTG > SRR4302533.699969/1‑94 (MQ=60)
CGCCGTCGTAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGC < SRR4302533.4229150/94‑1 (MQ=60)
CGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGC < SRR4302533.4307818/94‑1 (MQ=60)
CGCCGGCGCAAAAACTGGCCGATGTACAGACACTATTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGC < SRR4302533.1928185/94‑1 (MQ=60)
GCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCG < SRR4302533.1709328/94‑1 (MQ=60)
CGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGCGTGGCGGATAACGTGATTTGTTTTGACGCGCAAATACCACCGGCGCT > SRR4302533.1560983/1‑94 (MQ=60)
CGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTC < SRR4302533.4533485/94‑1 (MQ=60)
CGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTC > SRR4302533.655452/1‑94 (MQ=60)
GCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCT > SRR4302533.2503346/1‑94 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTC > SRR4302533.3814480/1‑94 (MQ=60)
CAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTC > SRR4302533.5608849/1‑94 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCG > SRR4302533.4866053/1‑94 (MQ=60)
AAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCG > SRR4302533.6217009/1‑94 (MQ=60)
AAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGGGCAAATACCACTGGCGCTTTCTCGC > SRR4302533.5278575/1‑94 (MQ=60)
AAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGC > SRR4302533.4092463/1‑94 (MQ=60)
AAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCG < SRR4302533.4083668/94‑1 (MQ=60)
AACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGC > SRR4302533.4097149/1‑94 (MQ=60)
CTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAG < SRR4302533.3211396/94‑1 (MQ=60)
TGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGC > SRR4302533.3344632/1‑94 (MQ=60)
GGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCA > SRR4302533.6183503/1‑94 (MQ=60)
GCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCAC < SRR4302533.5843126/94‑1 (MQ=60)
CCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACT > SRR4302533.755227/1‑94 (MQ=60)
CCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACT < SRR4302533.3693170/94‑1 (MQ=60)
GATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGC > SRR4302533.552738/1‑94 (MQ=60)
TGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGT < SRR4302533.229028/94‑1 (MQ=60)
GTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTG > SRR4302533.2728434/1‑94 (MQ=60)
GTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTG > SRR4302533.2852541/1‑94 (MQ=60)
GTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGCGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTG > SRR4302533.2852542/1‑94 (MQ=60)
GTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAAAGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTG > SRR4302533.2268218/1‑94 (MQ=60)
TACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGC < SRR4302533.5551460/94‑1 (MQ=60)
GACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGC < SRR4302533.5842685/94‑1 (MQ=60)
GACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGA > SRR4302533.5778054/1‑94 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG < SRR4302533.3189270/94‑1 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG > SRR4302533.4620593/1‑94 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG < SRR4302533.6034534/94‑1 (MQ=60)
ACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAG < SRR4302533.3536863/94‑1 (MQ=60)
ACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTA < SRR4302533.1058077/94‑1 (MQ=60)
CTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAG < SRR4302533.6282485/94‑1 (MQ=60)
CTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAG > SRR4302533.1018413/1‑94 (MQ=60)
CTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAG < SRR4302533.5455462/94‑1 (MQ=60)
CTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAG < SRR4302533.2252595/94‑1 (MQ=60)
TTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAG < SRR4302533.1253472/94‑1 (MQ=60)
GCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAG < SRR4302533.6000347/94‑1 (MQ=60)
CATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGT > SRR4302533.1590143/1‑94 (MQ=60)
CATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGT < SRR4302533.1252047/94‑1 (MQ=60)
CATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGG > SRR4302533.4862448/1‑94 (MQ=60)
TGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGC > SRR4302533.3472609/1‑94 (MQ=60)
AAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTTGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTG > SRR4302533.3155497/1‑94 (MQ=60)
AGCTGGTGTGGCTGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG < SRR4302533.2857569/94‑1 (MQ=60)
AGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG < SRR4302533.3015579/94‑1 (MQ=60)
AGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGG < SRR4302533.4409484/94‑1 (MQ=60)
AGCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTATCGCGCAGCACTGCGTGCCAGAGTTGAAGAGAGCAGG > SRR4302533.4092194/1‑94 (MQ=60)
GCGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGC > SRR4302533.5858604/1‑94 (MQ=60)
CGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCA > SRR4302533.4157856/1‑94 (MQ=60)
CGGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCA > SRR4302533.4840719/1‑94 (MQ=60)
GGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAT > SRR4302533.3469345/1‑94 (MQ=60)
GGGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCAT < SRR4302533.1396796/94‑1 (MQ=60)
GGTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATT < SRR4302533.3946423/94‑1 (MQ=60)
GTGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTT > SRR4302533.1482048/1‑94 (MQ=60)
TGTGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTA < SRR4302533.776302/94‑1 (MQ=60)
TGGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAAC < SRR4302533.5664071/94‑1 (MQ=60)
GGCGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACT < SRR4302533.2251483/94‑1 (MQ=60)
CGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGA < SRR4302533.6172442/94‑1 (MQ=60)
CGGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGA > SRR4302533.2967750/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATGCCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA < SRR4302533.616709/94‑1 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302533.997411/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA < SRR4302533.2104667/94‑1 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302533.4320400/1‑94 (MQ=60)
GGATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAA > SRR4302533.2611523/1‑94 (MQ=60)
GATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAAC > SRR4302533.2240177/1‑94 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302533.2544304/94‑1 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302533.2880424/94‑1 (MQ=60)
ATAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACA < SRR4302533.2022117/94‑1 (MQ=60)
TAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAA < SRR4302533.5156977/94‑1 (MQ=60)
TAACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAA > SRR4302533.449375/1‑94 (MQ=60)
ACGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAA > SRR4302533.3834769/1‑94 (MQ=60)
CGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAAT < SRR4302533.109692/94‑1 (MQ=60)
CGTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAAT < SRR4302533.5469224/94‑1 (MQ=60)
GTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATG < SRR4302533.964046/94‑1 (MQ=60)
GTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATG < SRR4302533.1593492/94‑1 (MQ=60)
GTGATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATG > SRR4302533.2498425/1‑94 (MQ=60)
ATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCA > SRR4302533.3066029/1‑94 (MQ=60)
ATTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCA < SRR4302533.4197983/94‑1 (MQ=60)
TTTGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCAT > SRR4302533.4443790/1‑94 (MQ=60)
TGTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGT < SRR4302533.2047903/94‑1 (MQ=60)
GTTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTA > SRR4302533.2926431/1‑94 (MQ=60)
TTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTAC > SRR4302533.1691072/1‑94 (MQ=60)
TTTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTAC < SRR4302533.5293180/94‑1 (MQ=60)
TTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACG > SRR4302533.1164545/1‑94 (MQ=60)
TTTGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACG < SRR4302533.5114723/94‑1 (MQ=60)
TGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAA > SRR4302533.2575315/1‑94 (MQ=60)
TGAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAA > SRR4302533.2635720/1‑94 (MQ=60)
GAGGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAA < SRR4302533.51998/94‑1 (MQ=60)
GGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC < SRR4302533.3907707/94‑1 (MQ=60)
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ACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACC > NC_000913/1461979‑1462165
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
