Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,464,084	T→C	intergenic (+999/+1861)	b1400 → / ← yi222	putative transferase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,464,084	0	T	C	99.4%	1052.4 / ‑3.8	330	intergenic (+999/+1861)	b1400/yi222	putative transferase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (115/213); total (117/213)
Fisher's exact test for biased strand distribution p-value = 1.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01

Only 100 of 343 total aligned reads displayed.

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

 aaCACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGcc                                                                                        <  2:8880531/93‑1 (MQ=255)

 aaCACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGGGATAACGcc                                                                                        >  1:6445387/1‑93 (MQ=255)

  acacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCca                                                                                       >  1:5553738/1‑93 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     <  1:10028532/93‑1 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     <  2:9173454/93‑1 (MQ=255)

      tGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGt                                                                                   >  2:9017673/1‑93 (MQ=255)

      tGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGCGAGCTTGTTATTACTGGTGATAATTCcacact                                                                                   >  2:8397772/1‑91 (MQ=255)

      tGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGGGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGGGATAACGCCACAga                                                                                   >  1:2619435/1‑92 (MQ=255)

       gTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTa                                                                                  >  2:5863004/1‑93 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               >  2:4945546/1‑93 (MQ=255)

           cccTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaaca                                                                              <  1:6930941/93‑1 (MQ=255)

            ccTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaa                                                                             >  1:2105789/1‑93 (MQ=255)

               taaaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAGcaacaa                                                                          <  2:4219198/91‑1 (MQ=255)

               tGAGGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  2:4183703/93‑1 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  2:7272094/93‑1 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       <  2:7960154/93‑1 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       >  1:6757034/1‑93 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       >  2:3572690/1‑93 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAAGCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       <  2:2431791/93‑1 (MQ=255)

                    gggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGAGATAACGCCACAGTAAACAACAATGGCa                                                                     >  1:1685189/1‑93 (MQ=255)

                     ggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaa                                                                    <  2:6263104/93‑1 (MQ=255)

                     ggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaa                                                                    >  1:8340344/1‑93 (MQ=255)

                      gTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaa                                                                   <  1:1480024/93‑1 (MQ=255)

                         aGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacc                                                                <  2:2174605/93‑1 (MQ=255)

                          gcgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacca                                                               <  1:4301622/93‑1 (MQ=255)

                          gcgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacca                                                               >  1:9498778/1‑93 (MQ=255)

                          gcgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacca                                                               <  2:9632601/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  1:926327/93‑1 (MQ=255)

                            gcAGAGCGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACCCCATAGTAAACAACAATGGCAAAaccacc                                                             <  2:5870299/93‑1 (MQ=255)

                             cAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCg                                                            <  1:4701030/93‑1 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          <  2:6560154/93‑1 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          >  1:5800774/1‑93 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          <  1:3820175/93‑1 (MQ=255)

                                aTGGCGCAACGAAGTGTCAATATAATCACAACGGTGAGCTTGTTATTACGGGTCATAACGCCACAGTAAACAACAATGGCAAAGCCACCGTTg                                                         <  2:7212815/93‑1 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        <  2:2356098/93‑1 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        <  1:7890866/93‑1 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGTGAGTTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCGCCGTTGAc                                                       <  1:37610/93‑1 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       <  1:4596132/93‑1 (MQ=255)

                                    cgcAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACgg                                                     <  2:7013701/93‑1 (MQ=255)

                                     gcAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGt                                                    >  2:4037547/1‑93 (MQ=255)

                                      cAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTa                                                   >  1:3449132/1‑93 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaa                                                  <  1:1380075/93‑1 (MQ=255)

                                        aCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaaa                                                 <  2:5155542/93‑1 (MQ=255)

                                         cGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAg                                                <  2:1629665/93‑1 (MQ=255)

                                         cGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAg                                                <  2:3288514/93‑1 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCCCAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  2:2113856/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  1:9956555/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  2:3116952/1‑93 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  2:7613188/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              >  2:1252650/1‑93 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            <  2:2604872/93‑1 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            <  1:9450782/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:8941248/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:8173303/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:7170912/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           >  2:5948503/1‑93 (MQ=255)

                                               ggCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCa                                          <  2:4623059/93‑1 (MQ=255)

                                               ggCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCa                                          <  2:8478984/93‑1 (MQ=255)

                                                 cAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAcc                                        <  1:2653424/93‑1 (MQ=255)

                                                   atatAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCgg                                      >  1:4525570/1‑93 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGt                                     <  2:5591794/93‑1 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGt                                     >  1:252027/1‑93 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    >  2:8126349/1‑93 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    <  1:1301537/93‑1 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    >  1:4029221/1‑93 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    <  1:4329247/93‑1 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    >  2:386793/1‑93 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   <  1:6328368/93‑1 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  <  1:6127349/93‑1 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  >  2:1371120/1‑93 (MQ=255)

                                                        aTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACgg                                 <  2:7138325/93‑1 (MQ=255)

                                                           acaACGGTGTGCTTGTTTTTACGGGTGATAACGCAACAGTAGACAACCATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaag                              <  2:8983768/93‑2 (MQ=21)

                                                           acaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaaa                              <  1:1147226/93‑1 (MQ=255)

                                                           acaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaaa                              >  2:1526817/1‑93 (MQ=255)

                                                            caACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAt                             <  2:3762804/93‑1 (MQ=255)

                                                             aaCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATc                            <  2:9222378/93‑1 (MQ=255)

                                                             aaCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATc                            >  1:75326/1‑93 (MQ=255)

                                                              aCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCa                           <  1:7657740/93‑1 (MQ=255)

                                                              aCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCa                           >  1:8700054/1‑93 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:5304546/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:5955131/93‑1 (MQ=255)

                                                                  tGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACgg                       >  2:5424396/1‑93 (MQ=255)

                                                                   gAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGt                      >  2:9841113/1‑93 (MQ=255)

                                                                    aGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGta                     <  1:9168155/93‑1 (MQ=255)

                                                                     gCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaa                    <  1:4891925/93‑1 (MQ=255)

                                                                      cTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaat                   >  2:1142477/1‑93 (MQ=255)

                                                                       ttGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaata                  >  1:6042011/1‑93 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaataa                 <  2:613892/93‑1 (MQ=255)

                                                                         gTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAAc                <  2:2972260/93‑1 (MQ=255)

                                                                              taCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaa           <  1:9713845/93‑1 (MQ=255)

                                                                               aCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaaa          >  1:4662468/1‑93 (MQ=255)

                                                                               aCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaaa          <  2:5746486/93‑1 (MQ=255)

                                                                                cGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAg         <  2:4325345/93‑1 (MQ=255)

                                                                                 gggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGt        <  1:304799/93‑1 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      <  1:3514724/93‑1 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      <  1:3351569/93‑1 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAAAAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      >  2:6489818/1‑93 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     >  1:512197/1‑93 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  2:7434299/93‑1 (MQ=255)

                                                                                    ggATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  2:8574567/92‑1 (MQ=255)

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  >  NC_000913/1463991‑1464177

GAATAACACTGTTGCCCTTGAAGGGGTGATCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.7894976/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.7894975/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.5984254/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.8166266/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.8166267/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.7055909/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.6140380/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAAC                                                                                               <  SRR4302540.9143898/94‑1 (MQ=60)

 AATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACG                                                                                              <  SRR4302540.765893/94‑1 (MQ=60)

 AATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACG                                                                                              >  SRR4302540.6981648/1‑94 (MQ=60)

 AATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACG                                                                                              <  SRR4302540.3409572/94‑1 (MQ=60)

   TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCC                                                                                            <  SRR4302540.1199900/94‑1 (MQ=60)

   TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCC                                                                                            >  SRR4302540.6517136/1‑94 (MQ=60)

   TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGGGATAACGCC                                                                                            >  SRR4302540.6517135/1‑94 (MQ=60)

    AACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCA                                                                                           >  SRR4302540.1375159/1‑94 (MQ=60)

    AACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCA                                                                                           >  SRR4302540.5614910/1‑94 (MQ=60)

     ACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCAC                                                                                          <  SRR4302540.2669865/94‑1 (MQ=60)

       ACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAG                                                                                        <  SRR4302540.2975092/94‑1 (MQ=60)

       ACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAG                                                                                        <  SRR4302540.10145207/94‑1 (MQ=60)

        CTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGGGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGGGATAACGCCACAGA                                                                                       >  SRR4302540.2647746/1‑94 (MQ=60)

           TTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGCTGAGCTTGTTATTCCGGGTGATAACGCCACAGTAAA                                                                                    <  SRR4302540.1851843/94‑1 (MQ=60)

            TGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAC                                                                                   <  SRR4302540.2588479/94‑1 (MQ=60)

            TGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAC                                                                                   <  SRR4302540.2588480/94‑1 (MQ=60)

            TGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAC                                                                                   >  SRR4302540.8769386/1‑94 (MQ=60)

             GCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACA                                                                                  >  SRR4302540.4658973/1‑94 (MQ=60)

              GCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAA                                                                                 <  SRR4302540.26629/94‑1 (MQ=60)

              CCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAA                                                                                 >  SRR4302540.2128390/1‑94 (MQ=60)

              CCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAA                                                                                 <  SRR4302540.7008067/94‑1 (MQ=60)

               CCTTGAAGGGGTGAGCGCAGATGGCGCAACTAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAAC                                                                                <  SRR4302540.4368575/94‑1 (MQ=60)

               CCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTTGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAAC                                                                                >  SRR4302540.8078287/1‑94 (MQ=60)

               CCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAAC                                                                                <  SRR4302540.4368576/94‑1 (MQ=60)

                 TTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAA                                                                              <  SRR4302540.945529/94‑1 (MQ=60)

                 TTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAA                                                                              <  SRR4302540.3521888/94‑1 (MQ=60)

                 TTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAA                                                                              <  SRR4302540.3521887/94‑1 (MQ=60)

                 TTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAA                                                                              >  SRR4302540.7751074/1‑94 (MQ=60)

                  TGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAT                                                                             >  SRR4302540.3802199/1‑94 (MQ=60)

                  TGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAT                                                                             <  SRR4302540.2415738/94‑1 (MQ=60)

                  TGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAT                                                                             <  SRR4302540.5581970/94‑1 (MQ=60)

                  TGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAT                                                                             >  SRR4302540.7475483/1‑94 (MQ=60)

                   GAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATG                                                                            <  SRR4302540.6439146/94‑1 (MQ=60)

                   GAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATG                                                                            >  SRR4302540.8922739/1‑94 (MQ=60)

                    AAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGG                                                                           >  SRR4302540.7937556/1‑94 (MQ=60)

                    AAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGG                                                                           <  SRR4302540.6479314/94‑1 (MQ=60)

                    AAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGG                                                                           >  SRR4302540.6831699/1‑94 (MQ=60)

                    AAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGG                                                                           >  SRR4302540.6831700/1‑94 (MQ=60)

                    AAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGG                                                                           <  SRR4302540.6330668/94‑1 (MQ=60)

                     AGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGC                                                                          <  SRR4302540.9569609/94‑1 (MQ=60)

                     AGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGC                                                                          <  SRR4302540.1512202/94‑1 (MQ=60)

                     AGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGC                                                                          <  SRR4302540.7207103/94‑1 (MQ=60)

                      GGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGAGATAACGCCACAGTAAACAACAATGGCA                                                                         >  SRR4302540.1703474/1‑94 (MQ=60)

                       GGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAA                                                                        >  SRR4302540.8437151/1‑94 (MQ=60)

                        GGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAA                                                                       <  SRR4302540.3463953/94‑1 (MQ=60)

                        GGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAA                                                                       <  SRR4302540.2917832/94‑1 (MQ=60)

                         GTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAA                                                                      <  SRR4302540.1496236/94‑1 (MQ=60)

                         GTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAA                                                                      >  SRR4302540.6767020/1‑94 (MQ=60)

                         GTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAA                                                                      >  SRR4302540.891521/1‑94 (MQ=60)

                         GTGAGCACAGATGGGGCAACGAAGTGTCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAA                                                                      <  SRR4302540.1496234/94‑1 (MQ=60)

                           GAGCGCAGATGGCGCAACGAAGTNGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACC                                                                    <  SRR4302540.4589779/94‑1 (MQ=60)

                            gaccgAGATGGAGCAACGAAGTTGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGGAAAACCA                                                                   <  SRR4302540.344435/89‑1 (MQ=60)

                            AGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCA                                                                   >  SRR4302540.9611338/1‑94 (MQ=60)

                             GCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCAC                                                                  <  SRR4302540.9324531/94‑1 (MQ=60)

                             GCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCAC                                                                  <  SRR4302540.4348443/94‑1 (MQ=60)

                              CGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACC                                                                 <  SRR4302540.936082/94‑1 (MQ=60)

                              CGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACC                                                                 <  SRR4302540.9448963/94‑1 (MQ=60)

                               GCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCG                                                                >  SRR4302540.3222055/1‑94 (MQ=60)

                               GCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCG                                                                >  SRR4302540.1373929/1‑94 (MQ=60)

                                CAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGT                                                               <  SRR4302540.4751272/94‑1 (MQ=60)

                                 AGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTT                                                              >  SRR4302540.1101592/1‑94 (MQ=60)

                                 AGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTT                                                              <  SRR4302540.3615346/94‑1 (MQ=60)

                                 AGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTT                                                              <  SRR4302540.6354909/94‑1 (MQ=60)

                                 AGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTT                                                              >  SRR4302540.5864872/1‑94 (MQ=60)

                                 AGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGCGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTT                                                              >  SRR4302540.4149952/1‑94 (MQ=60)

                                  GATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTG                                                             >  SRR4302540.5332741/1‑94 (MQ=60)

                                  GATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTG                                                             <  SRR4302540.3861756/94‑1 (MQ=60)

                                   ATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGA                                                            <  SRR4302540.8362240/94‑1 (MQ=60)

                                   ATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGA                                                            <  SRR4302540.5043295/94‑1 (MQ=60)

                                   ATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGA                                                            <  SRR4302540.5043297/94‑1 (MQ=60)

                                   ATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGA                                                            <  SRR4302540.3126842/94‑1 (MQ=60)

                                    TGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAC                                                           <  SRR4302540.7982961/94‑1 (MQ=60)

                                    TGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAC                                                           <  SRR4302540.4716657/94‑1 (MQ=60)

                                    TGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAC                                                           <  SRR4302540.110584/94‑1 (MQ=60)

                                     GGCGCAACGAAGTGGCAATATAATCACAACGGTGAGTTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCGCCGTTGACG                                                          <  SRR4302540.38001/94‑1 (MQ=60)

                                     GGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACG                                                          <  SRR4302540.4645564/94‑1 (MQ=60)

                                     GGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACG                                                          >  SRR4302540.6244292/1‑94 (MQ=60)

                                     GGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACG                                                          <  SRR4302540.37739/94‑1 (MQ=60)

                                       CGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGT                                                        >  SRR4302540.3670448/1‑94 (MQ=60)

                                       CGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGA                                                        >  SRR4302540.976870/1‑94 (MQ=60)

                                        GCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTA                                                       >  SRR4302540.3486651/1‑94 (MQ=60)

                                         CAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAA                                                      <  SRR4302540.10046237/94‑1 (MQ=60)

                                         CAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAA                                                      <  SRR4302540.4382107/94‑1 (MQ=60)

                                         CAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAA                                                      >  SRR4302540.9242657/1‑94 (MQ=60)

                                         CAACGAAGTGGCAATATAATCACAACGCTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAA                                                      <  SRR4302540.1521085/94‑1 (MQ=60)

                                          AACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAA                                                     <  SRR4302540.1394791/94‑1 (MQ=60)

                                          AACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAA                                                     <  SRR4302540.1395098/94‑1 (MQ=60)

                                          AACGAAGTGGCAATATAATCACAACGGCGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAA                                                     >  SRR4302540.4389826/1‑94 (MQ=60)

                                           ACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAG                                                    >  SRR4302540.551030/1‑94 (MQ=60)

                                            CGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGA                                                   >  SRR4302540.10072766/1‑94 (MQ=60)

                                            CGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGA                                                   >  SRR4302540.1547839/1‑94 (MQ=60)

                                            CGAAGTGGCAATATAAGCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGA                                                   >  SRR4302540.8346923/1‑94 (MQ=60)

                                              AAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATT                                                 <  SRR4302540.9655123/94‑1 (MQ=60)

                                              AAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATT                                                 <  SRR4302540.4208215/94‑1 (MQ=60)

                                                GTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCC                                               <  SRR4302540.9562966/94‑1 (MQ=60)

                                                GTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGGAAAGATTCC                                               >  SRR4302540.2273590/1‑94 (MQ=60)

                                                 TGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCA                                              <  SRR4302540.7250849/94‑1 (MQ=60)

                                                 TGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCA                                              <  SRR4302540.8268241/94‑1 (MQ=60)

                                                 TGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCA                                              <  SRR4302540.9046193/94‑1 (MQ=60)

                                                 TGGCAATATAATCACAACGGGGAGATTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCTGTGACGGTAAAGATTCCA                                              >  SRR4302540.9065827/1‑94 (MQ=60)

                                                   GCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACC                                            <  SRR4302540.7237949/94‑1 (MQ=60)

                                                   GCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACC                                            <  SRR4302540.6184832/94‑1 (MQ=60)

                                                    CAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCG                                           <  SRR4302540.4011990/94‑1 (MQ=60)

                                                    CAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCG                                           <  SRR4302540.2682211/94‑1 (MQ=60)

                                                     AATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGG                                          >  SRR4302540.4574572/1‑94 (MQ=60)

                                                      ATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGT                                         >  SRR4302540.254465/1‑94 (MQ=60)

                                                      ATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGT                                         >  SRR4302540.4659316/1‑94 (MQ=60)

                                                       TATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTA                                        <  SRR4302540.27147/94‑1 (MQ=60)

                                                       TATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTA                                        >  SRR4302540.4072667/1‑94 (MQ=60)

                                                       TATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTA                                        <  SRR4302540.5614318/94‑1 (MQ=60)

                                                        ATAATCACAACGGTGATCTTGTTAGTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCCCCGTTGACGGTAAAGATTCCACCGGTAC                                       <  SRR4302540.1315027/94‑1 (MQ=60)

                                                        ATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAC                                       <  SRR4302540.3851652/94‑1 (MQ=60)

                                                        ATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAC                                       <  SRR4302540.1315028/94‑1 (MQ=60)

                                                        ATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAC                                       <  SRR4302540.4376378/94‑1 (MQ=60)

                                                         TAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACG                                      <  SRR4302540.6890712/94‑1 (MQ=60)

                                                         TAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACG                                      <  SRR4302540.6398836/94‑1 (MQ=60)

                                                          AATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGG                                     <  SRR4302540.6195596/94‑1 (MQ=60)

                                                            TCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAA                                   <  SRR4302540.5856718/94‑1 (MQ=60)

                                                             CACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAA                                  >  SRR4302540.9593126/1‑94 (MQ=60)

                                                              ACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAT                                 <  SRR4302540.6786310/94‑1 (MQ=60)

                                                              ACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAT                                 <  SRR4302540.1159195/94‑1 (MQ=60)

                                                               CAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATC                                <  SRR4302540.5956349/94‑1 (MQ=60)

                                                               CAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATC                                >  SRR4302540.76107/1‑94 (MQ=60)

                                                                AACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCA                               >  SRR4302540.8801044/1‑94 (MQ=60)

                                                                AACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCA                               <  SRR4302540.760010/94‑1 (MQ=60)

                                                                 ACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAA                              >  SRR4302540.8070058/1‑94 (MQ=60)

                                                                 ACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAA                              <  SRR4302540.4911440/94‑1 (MQ=60)

                                                                 ACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAA                              <  SRR4302540.7743964/94‑1 (MQ=60)

                                                                 ACGGTGAGCTTCTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCCCCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAA                              <  SRR4302540.4536587/94‑1 (MQ=60)

                                                                  CGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAC                             <  SRR4302540.5130938/94‑1 (MQ=60)

                                                                   GGTGATCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.4309836/94‑1 (MQ=60)

                                                                   GGTGAGCTTGTTATTACGGGTGATAACGCGACAGTAAACAACAATGGCAAAACCGCCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.6078111/94‑1 (MQ=60)

                                                                   GGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.5362587/94‑1 (MQ=60)

                                                                   GGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.2466830/94‑1 (MQ=60)

                                                                   GGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.6020991/94‑1 (MQ=60)

                                                                   GGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACG                            <  SRR4302540.6020990/94‑1 (MQ=60)

                                                                    GTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAATGG                           >  SRR4302540.8847228/1‑94 (MQ=60)

                                                                    GTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGG                           <  SRR4302540.3433620/94‑1 (MQ=60)

                                                                     TGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGT                          <  SRR4302540.3976599/94‑1 (MQ=60)

                                                                       AGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAA                        <  SRR4302540.9966161/94‑1 (MQ=60)

                                                                       AGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAA                        <  SRR4302540.9278147/94‑1 (MQ=60)

                                                                        GCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAAT                       <  SRR4302540.4741318/94‑1 (MQ=60)

                                                                        GCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAAT                       <  SRR4302540.461735/94‑1 (MQ=60)

                                                                        GCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAAT                       <  SRR4302540.4944530/94‑1 (MQ=60)

                                                                        GCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAGTCCACCGGTACGGAAATCAACGGTAAT                       <  SRR4302540.7840153/94‑1 (MQ=60)

                                                                         CTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATA                      >  SRR4302540.6109116/1‑94 (MQ=60)

                                                                          TTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAA                     >  SRR4302540.5773935/1‑94 (MQ=60)

                                                                          TTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAA                     <  SRR4302540.3472758/94‑1 (MQ=60)

                                                                            GTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACAACCGTTGACGGTAAAGATTCCACCGGTACGGCAATCAACGGCAATAACG                   >  SRR4302540.8501164/1‑94 (MQ=60)

                                                                              TATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGG                 >  SRR4302540.5878647/1‑94 (MQ=60)

                                                                                TTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAA               <  SRR4302540.6184909/94‑1 (MQ=60)

                                                                                 TACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAA              <  SRR4302540.9294346/94‑1 (MQ=60)

                                                                                 TACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAA              <  SRR4302540.9822865/94‑1 (MQ=60)

                                                                                 TACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAA              <  SRR4302540.9827994/94‑1 (MQ=60)

                                                                                 TACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAA              >  SRR4302540.4712377/1‑94 (MQ=60)

                                                                                 TACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGATAATAACAGGAAA              >  SRR4302540.4712375/1‑94 (MQ=60)

                                                                                  GCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCAGCGTTGACGGTAAAGATGCCACGGGTACGGAAATCAACGGTAATAACGGGAAAG             <  SRR4302540.7690739/94‑1 (MQ=60)

                                                                                  ACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAG             <  SRR4302540.7690744/94‑1 (MQ=60)

                                                                                    GGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTG           <  SRR4302540.307826/94‑1 (MQ=60)

                                                                                     GGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGA          >  SRR4302540.6098872/1‑94 (MQ=60)

                                                                                      GTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAT         <  SRR4302540.8408745/94‑1 (MQ=60)

                                                                                      GTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAT         >  SRR4302540.517699/1‑94 (MQ=60)

                                                                                      GTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAT         <  SRR4302540.5205948/94‑1 (MQ=60)

                                                                                      GTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAT         <  SRR4302540.3553012/94‑1 (MQ=60)

                                                                                      GTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAT         <  SRR4302540.3388308/94‑1 (MQ=60)

                                                                                        GATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTC       <  SRR4302540.1830515/94‑1 (MQ=60)

                                                                                         ATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA      <  SRR4302540.7087860/94‑1 (MQ=60)

                                                                                          TAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAG     <  SRR4302540.4823080/94‑1 (MQ=60)

                                                                                          TAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAG     <  SRR4302540.1359994/94‑1 (MQ=60)

                                                                                          TAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAG     <  SRR4302540.9506821/94‑1 (MQ=60)

                                                                                           AACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGG    <  SRR4302540.2006438/94‑1 (MQ=60)

                                                                                            ACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGA   <  SRR4302540.5503456/94‑1 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCATCGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.3973094/94‑1 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.6853621/94‑1 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  >  SRR4302540.2386700/1‑94 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.972703/94‑1 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.3973093/94‑1 (MQ=60)

                                                                                             CGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.8452040/94‑1 (MQ=60)

                                                                                             AGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  <  SRR4302540.7199266/94‑1 (MQ=60)

GAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGAC  >  NC_000913/1463991‑1464177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`