Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,473,746	A→G	K195K (AAA→AAG)	ydbD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,473,746	0	A	G	99.1%	1112.6 / ‑3.3	347	K195K (AAA→AAG)	ydbD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (173/171); total (175/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 365 total aligned reads displayed.

TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT  >  NC_000913/1473656‑1473835

tGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgc                                                                                         >  2:9374306/1‑93 (MQ=255)

tGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgc                                                                                         <  1:5044121/93‑1 (MQ=255)

  aCATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgcgc                                                                                       >  1:369763/1‑93 (MQ=255)

   cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCt                                                                                      <  1:2317865/93‑1 (MQ=255)

    aTAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtg                                                                                     >  1:2085345/1‑93 (MQ=255)

     tAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtga                                                                                    >  2:7069795/1‑93 (MQ=255)

     tAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGCTCCGTGCGATTGACAAATATGACCCTGAAAATGTCAAAAAGGCGCtga                                                                                    >  2:2958577/1‑93 (MQ=255)

       aTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatg                                                                                  >  1:1832209/1‑93 (MQ=255)

       aTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatg                                                                                  >  1:8263629/1‑93 (MQ=255)

         tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat                                                                                <  1:2894520/93‑1 (MQ=255)

          gCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGata                                                                               <  2:5647392/93‑1 (MQ=255)

          gCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGata                                                                               >  2:1164883/1‑93 (MQ=255)

           cACGTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataa                                                                              <  2:2102193/93‑1 (MQ=255)

           cACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataa                                                                              <  1:1422353/93‑1 (MQ=255)

           cACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataa                                                                              <  2:8364343/93‑1 (MQ=255)

             ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata                                                                            <  1:8529046/93‑1 (MQ=255)

             ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata                                                                            <  1:5974592/93‑1 (MQ=255)

             ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata                                                                            <  1:3871705/93‑1 (MQ=255)

             ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata                                                                            >  2:6340796/1‑93 (MQ=255)

             ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata                                                                            <  2:4642452/93‑1 (MQ=255)

              cTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAtaataa                                                                           >  1:4013659/1‑93 (MQ=255)

              cTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAtaataa                                                                           >  1:8413471/1‑93 (MQ=255)

               tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa                                                                          >  2:3753422/1‑93 (MQ=255)

                gttgttGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAt                                                                         >  1:7287735/1‑93 (MQ=255)

                gttgttGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAt                                                                         <  1:1134260/93‑1 (MQ=255)

                 ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc                                                                        <  1:3504599/93‑1 (MQ=255)

                 ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc                                                                        >  2:2688621/1‑93 (MQ=255)

                 ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc                                                                        >  1:4740210/1‑93 (MQ=255)

                  tgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATcc                                                                       <  1:4483405/93‑1 (MQ=255)

                  tgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATcc                                                                       >  1:3304985/1‑93 (MQ=255)

                    ttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTg                                                                     <  2:1999583/93‑1 (MQ=255)

                      gCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAt                                                                   >  2:4189813/1‑93 (MQ=255)

                        gTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGCAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATga                                                                 >  2:9799655/1‑92 (MQ=255)

                        gTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGc                                                                 <  2:8451535/93‑1 (MQ=255)

                        gTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGc                                                                 >  2:552192/1‑93 (MQ=255)

                        gTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGc                                                                 <  1:6874801/93‑1 (MQ=255)

                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                >  2:1559959/1‑93 (MQ=255)

                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                >  1:6624164/1‑93 (MQ=255)

                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              >  1:5369607/1‑93 (MQ=255)

                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              <  1:4373460/93‑1 (MQ=255)

                            tCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCatat                                                             <  2:9082778/93‑1 (MQ=255)

                            tCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCatat                                                             <  1:4868586/93‑1 (MQ=255)

                            tCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCatat                                                             >  1:1568769/1‑93 (MQ=255)

                            tCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCatat                                                             >  2:3945619/1‑93 (MQ=255)

                              gACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatta                                                           <  1:6537701/93‑1 (MQ=255)

                                cAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATattatt                                                         <  2:6411288/93‑1 (MQ=255)

                                cAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATattatt                                                         >  1:9811727/1‑93 (MQ=255)

                                 aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg                                                        <  1:1026292/93‑1 (MQ=255)

                                 aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg                                                        >  2:6690647/1‑93 (MQ=255)

                                   aTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggg                                                      >  2:2387364/1‑93 (MQ=255)

                                   aTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggg                                                      >  2:526791/1‑93 (MQ=255)

                                    tAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTgggg                                                     >  1:8556954/1‑93 (MQ=255)

                                    tAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTgggg                                                     >  1:7513473/1‑93 (MQ=255)

                                     aGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggggg                                                    <  1:8828957/93‑1 (MQ=255)

                                         aaTTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaa                                                <  2:3058485/93‑1 (MQ=255)

                                         aaTTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaa                                                <  2:6041613/93‑1 (MQ=255)

                                          aTTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaat                                               <  1:5633029/93‑1 (MQ=255)

                                              aTGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaattaat                                           >  1:4601806/1‑93 (MQ=255)

                                               tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg                                          >  2:3649607/1‑93 (MQ=255)

                                               tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg                                          >  1:9272823/1‑93 (MQ=255)

                                                tgTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatga                                         <  2:3029858/92‑1 (MQ=255)

                                                 gTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatgat                                        <  1:9309474/93‑1 (MQ=255)

                                                    cGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGaa                                     >  1:6149811/1‑93 (MQ=255)

                                                     gTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAg                                    >  1:6339942/1‑93 (MQ=255)

                                                     gTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAg                                    >  1:2593949/1‑93 (MQ=255)

                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   >  2:3528775/1‑93 (MQ=255)

                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   <  2:7184627/93‑1 (MQ=255)

                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   <  2:5197400/93‑1 (MQ=255)

                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   >  2:8896119/1‑93 (MQ=255)

                                                         gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc                                >  2:4749090/1‑93 (MQ=255)

                                                          aGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGct                               <  2:4931266/93‑1 (MQ=255)

                                                           gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc                              <  1:270841/93‑1 (MQ=255)

                                                            tGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctct                             >  2:987634/1‑93 (MQ=255)

                                                              aCAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTga                           <  2:2479086/93‑1 (MQ=255)

                                                              aCAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTga                           <  2:5894642/93‑1 (MQ=255)

                                                               cAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaa                          <  2:8785624/93‑1 (MQ=255)

                                                               cAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaa                          >  2:1291019/1‑93 (MQ=255)

                                                                   cATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaagaa                      >  2:2217099/1‑93 (MQ=255)

                                                                    aTGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaagaaa                     >  1:7973041/1‑93 (MQ=255)

                                                                        cacTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAtttt                 >  1:962401/1‑93 (MQ=255)

                                                                         acTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAttttt                <  2:163153/93‑1 (MQ=255)

                                                                           tGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTaa              >  2:6166978/1‑93 (MQ=255)

                                                                           tGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTaa              <  1:718176/93‑1 (MQ=255)

                                                                           tGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTaa              >  1:6728648/1‑93 (MQ=255)

                                                                            gAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAg             >  2:6537472/1‑93 (MQ=255)

                                                                            gAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAg             <  2:816143/93‑1 (MQ=255)

                                                                             aaaaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGc            <  1:8178435/93‑1 (MQ=255)

                                                                              aaaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCg           >  1:7747527/1‑93 (MQ=255)

                                                                               aaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGa          >  2:9742775/1‑93 (MQ=255)

                                                                               aaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGa          <  2:7470204/93‑1 (MQ=255)

                                                                                aTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGaa         <  2:1763045/93‑1 (MQ=255)

                                                                                aTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGaa         <  1:9421874/93‑1 (MQ=255)

                                                                                aTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGaa         <  1:2474131/93‑1 (MQ=255)

                                                                                 tGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAg        >  2:1070756/1‑93 (MQ=255)

                                                                                 tGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAg        >  2:4006675/1‑93 (MQ=255)

                                                                                 tGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTATAAGCGAAg        <  1:9893943/93‑1 (MQ=255)

                                                                                    cAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCaa     <  2:4300275/93‑1 (MQ=255)

                                                                                    cAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCaa     <  2:4022723/93‑1 (MQ=255)

                                                                                     aaaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAat    >  2:2917472/1‑93 (MQ=255)

                                                                                       aaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAatat  <  2:620553/93‑1 (MQ=255)

TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT  >  NC_000913/1473656‑1473835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCG  >  NC_000913/1473653‑1473838

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG                                                                                              >  SRR4302540.5878912/1‑94 (MQ=60)

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG                                                                                              <  SRR4302540.9745807/94‑1 (MQ=60)

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG                                                                                              <  SRR4302540.5214526/94‑1 (MQ=60)

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG                                                                                              >  SRR4302540.6393772/1‑94 (MQ=60)

 AATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGG                                                                                             <  SRR4302540.7998771/94‑1 (MQ=60)

 AATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGG                                                                                             <  SRR4302540.6597399/94‑1 (MQ=60)

  ATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGC                                                                                            <  SRR4302540.94803/94‑1 (MQ=60)

  ATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGC                                                                                            <  SRR4302540.956177/94‑1 (MQ=60)

   TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCG                                                                                           >  SRR4302540.387467/1‑94 (MQ=60)

   TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCG                                                                                           <  SRR4302540.6620685/94‑1 (MQ=60)

   TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCG                                                                                           <  SRR4302540.5098680/94‑1 (MQ=60)

    GACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGACAATGTCAAAAAGGCGC                                                                                          >  SRR4302540.7268356/1‑94 (MQ=60)

    GACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGC                                                                                          >  SRR4302540.373578/1‑94 (MQ=60)

    GACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGC                                                                                          >  SRR4302540.9236980/1‑94 (MQ=60)

     ACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCT                                                                                         >  SRR4302540.3182279/1‑94 (MQ=60)

      CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG                                                                                        >  SRR4302540.7625158/1‑94 (MQ=60)

      CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG                                                                                        >  SRR4302540.9473826/1‑94 (MQ=60)

      CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG                                                                                        >  SRR4302540.2107746/1‑94 (MQ=60)

      CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG                                                                                        <  SRR4302540.4804962/94‑1 (MQ=60)

      CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTG                                                                                        <  SRR4302540.2342822/94‑1 (MQ=60)

       ATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGA                                                                                       >  SRR4302540.9161747/1‑94 (MQ=60)

        TAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGAT                                                                                      <  SRR4302540.3976814/94‑1 (MQ=60)

         AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG                                                                                     >  SRR4302540.1852256/1‑94 (MQ=60)

         AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG                                                                                     >  SRR4302540.8359653/1‑94 (MQ=60)

         AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG                                                                                     >  SRR4302540.8359654/1‑94 (MQ=60)

         AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG                                                                                     >  SRR4302540.8492167/1‑94 (MQ=60)

          ATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGA                                                                                    >  SRR4302540.6114691/1‑94 (MQ=60)

           TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT                                                                                   <  SRR4302540.2617430/94‑1 (MQ=60)

           TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT                                                                                   <  SRR4302540.1860234/94‑1 (MQ=60)

           TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT                                                                                   >  SRR4302540.4895297/1‑94 (MQ=60)

            TGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATA                                                                                  <  SRR4302540.2926083/94‑1 (MQ=60)

              CACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAAT                                                                                <  SRR4302540.1437741/94‑1 (MQ=60)

                CCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAA                                                                              >  SRR4302540.8511125/1‑94 (MQ=60)

                CCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAA                                                                              <  SRR4302540.3913795/94‑1 (MQ=60)

                CCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAA                                                                              <  SRR4302540.6040729/94‑1 (MQ=60)

                CCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAA                                                                              >  SRR4302540.4056890/1‑94 (MQ=60)

                CCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAA                                                                              <  SRR4302540.8628147/94‑1 (MQ=60)

                 CTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA                                                                             <  SRR4302540.6778049/94‑1 (MQ=60)

                 CTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA                                                                             >  SRR4302540.8909513/1‑94 (MQ=60)

                 CTGTTGTTGCGTCTTAGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA                                                                             <  SRR4302540.8164577/94‑1 (MQ=60)

                  TGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAT                                                                            >  SRR4302540.7369058/1‑94 (MQ=60)

                   tttgttgagtttttGACAAATAGTGAATTCTGGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATC                                                                           <  SRR4302540.1146084/80‑1 (MQ=60)

                   GTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATC                                                                           <  SRR4302540.2681488/94‑1 (MQ=60)

                   GTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATC                                                                           <  SRR4302540.1146083/94‑1 (MQ=60)

                   GTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATC                                                                           >  SRR4302540.4790796/1‑94 (MQ=60)

                   GTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATC                                                                           <  SRR4302540.614908/94‑1 (MQ=60)

                    TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC                                                                          <  SRR4302540.4393323/94‑1 (MQ=60)

                    TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC                                                                          <  SRR4302540.5878073/94‑1 (MQ=60)

                    TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC                                                                          <  SRR4302540.3542778/94‑1 (MQ=60)

                    TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC                                                                          >  SRR4302540.3341171/1‑94 (MQ=60)

                     TGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCT                                                                         >  SRR4302540.109734/1‑94 (MQ=60)

                     TGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCT                                                                         <  SRR4302540.4532032/94‑1 (MQ=60)

                      GTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTG                                                                        >  SRR4302540.4782944/1‑94 (MQ=60)

                      GTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTG                                                                        >  SRR4302540.2617677/1‑94 (MQ=60)

                       TTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGA                                                                       >  SRR4302540.7987581/1‑94 (MQ=60)

                        TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT                                                                      <  SRR4302540.7646992/94‑1 (MQ=60)

                        TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT                                                                      <  SRR4302540.5130054/94‑1 (MQ=60)

                        TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT                                                                      <  SRR4302540.229607/94‑1 (MQ=60)

                        TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT                                                                      <  SRR4302540.8591858/94‑1 (MQ=60)

                         GCGTCTTCGACAAATAGTTAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATG                                                                     >  SRR4302540.5617224/1‑94 (MQ=60)

                          CGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGC                                                                    >  SRR4302540.465184/1‑94 (MQ=60)

                           GTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCA                                                                   <  SRR4302540.6950993/94‑1 (MQ=60)

                           GTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCA                                                                   >  SRR4302540.7247504/1‑94 (MQ=60)

                           GTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCA                                                                   >  SRR4302540.6697500/1‑94 (MQ=60)

                            TCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAT                                                                  <  SRR4302540.4562954/94‑1 (MQ=60)

                            TCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAT                                                                  <  SRR4302540.8300552/94‑1 (MQ=60)

                            TCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAT                                                                  <  SRR4302540.1553553/94‑1 (MQ=60)

                             CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA                                                                 >  SRR4302540.2923739/1‑94 (MQ=60)

                             CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA                                                                 >  SRR4302540.5428621/1‑94 (MQ=60)

                              TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT                                                                >  SRR4302540.7398055/1‑94 (MQ=60)

                              TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT                                                                >  SRR4302540.5611464/1‑94 (MQ=60)

                              TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT                                                                <  SRR4302540.4420957/94‑1 (MQ=60)

                              TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT                                                                >  SRR4302540.1585970/1‑94 (MQ=60)

                               TCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATT                                                               >  SRR4302540.6546935/1‑94 (MQ=60)

                               TCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATT                                                               <  SRR4302540.4920809/94‑1 (MQ=60)

                                CGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTA                                                              >  SRR4302540.3515319/1‑94 (MQ=60)

                                CGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTA                                                              <  SRR4302540.7017039/94‑1 (MQ=60)

                                 GACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTAT                                                             >  SRR4302540.2477041/1‑94 (MQ=60)

                                 GACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTAT                                                             <  SRR4302540.1548270/94‑1 (MQ=60)

                                 GACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTAT                                                             <  SRR4302540.1256565/94‑1 (MQ=60)

                                 GACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTAT                                                             <  SRR4302540.6610256/94‑1 (MQ=60)

                                  ACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATT                                                            <  SRR4302540.9578453/94‑1 (MQ=60)

                                  ACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATT                                                            >  SRR4302540.9926555/1‑94 (MQ=60)

                                   CAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTG                                                           <  SRR4302540.8138088/94‑1 (MQ=60)

                                   CAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTG                                                           >  SRR4302540.2972512/1‑94 (MQ=60)

                                   CAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTG                                                           >  SRR4302540.9816348/1‑94 (MQ=60)

                                    AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG                                                          <  SRR4302540.6420882/94‑1 (MQ=60)

                                    AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG                                                          <  SRR4302540.1036702/94‑1 (MQ=60)

                                    AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG                                                          <  SRR4302540.4000837/94‑1 (MQ=60)

                                    AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG                                                          <  SRR4302540.2557060/94‑1 (MQ=60)

                                     AATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGG                                                         <  SRR4302540.4220079/94‑1 (MQ=60)

                                      ATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGG                                                        >  SRR4302540.7597473/1‑94 (MQ=60)

                                      ATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGG                                                        >  SRR4302540.8656343/1‑94 (MQ=60)

                                      ATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGG                                                        >  SRR4302540.8656344/1‑94 (MQ=60)

                                       TAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGG                                                       <  SRR4302540.4642461/94‑1 (MQ=60)

                                        AGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGC                                                      <  SRR4302540.8931055/94‑1 (MQ=60)

                                         GTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCT                                                     <  SRR4302540.7876950/94‑1 (MQ=60)

                                          TGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTA                                                    >  SRR4302540.5412063/1‑94 (MQ=60)

                                            AATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAAT                                                  <  SRR4302540.1830470/94‑1 (MQ=60)

                                            AATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAAT                                                  <  SRR4302540.7324811/94‑1 (MQ=60)

                                             ATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATT                                                 <  SRR4302540.5695028/94‑1 (MQ=60)

                                             ATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATT                                                 >  SRR4302540.9983269/1‑94 (MQ=60)

                                              TTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTA                                                <  SRR4302540.4792009/94‑1 (MQ=60)

                                               TCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAA                                               >  SRR4302540.9757004/1‑94 (MQ=60)

                                                CATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAAT                                              <  SRR4302540.9958397/94‑1 (MQ=60)

                                                CATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAAT                                              >  SRR4302540.4651256/1‑94 (MQ=60)

                                                 ATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATG                                             >  SRR4302540.4425822/1‑94 (MQ=60)

                                                 ATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATG                                             >  SRR4302540.9383697/1‑94 (MQ=60)

                                                 ATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATG                                             >  SRR4302540.4706715/1‑94 (MQ=60)

                                                 ATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGCCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATG                                             <  SRR4302540.1809332/94‑1 (MQ=60)

                                                   GGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGAT                                           <  SRR4302540.6844333/94‑1 (MQ=60)

                                                   GGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGAT                                           <  SRR4302540.1884691/94‑1 (MQ=60)

                                                   GGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGAT                                           <  SRR4302540.9157328/94‑1 (MQ=60)

                                                   GGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGAT                                           <  SRR4302540.954870/94‑1 (MQ=60)

                                                    GTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATG                                          <  SRR4302540.9420620/94‑1 (MQ=60)

                                                    GTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATG                                          <  SRR4302540.9420619/94‑1 (MQ=60)

                                                    GTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATG                                          <  SRR4302540.5134306/94‑1 (MQ=60)

                                                      CCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAA                                        <  SRR4302540.6760376/94‑1 (MQ=60)

                                                      CCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAA                                        >  SRR4302540.6218306/1‑94 (MQ=60)

                                                      CCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAA                                        <  SRR4302540.6636585/94‑1 (MQ=60)

                                                       CGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAG                                       >  SRR4302540.6410548/1‑94 (MQ=60)

                                                       CGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAG                                       >  SRR4302540.6410549/1‑94 (MQ=60)

                                                       CGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAG                                       >  SRR4302540.2621926/1‑94 (MQ=60)

                                                        GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA                                      <  SRR4302540.8326800/94‑1 (MQ=60)

                                                        GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA                                      >  SRR4302540.2469090/1‑94 (MQ=60)

                                                        GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA                                      >  SRR4302540.2636373/1‑94 (MQ=60)

                                                        GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA                                      <  SRR4302540.6646336/94‑1 (MQ=60)

                                                         TGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAT                                     <  SRR4302540.2409027/94‑1 (MQ=60)

                                                         TGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAT                                     <  SRR4302540.3396917/94‑1 (MQ=60)

                                                         TGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAT                                     <  SRR4302540.4507900/94‑1 (MQ=60)

                                                              GTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCT                                >  SRR4302540.3728065/1‑94 (MQ=60)

                                                              GTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCT                                >  SRR4302540.859001/1‑94 (MQ=60)

                                                              GTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCT                                <  SRR4302540.273508/94‑1 (MQ=60)

                                                               TGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTG                               >  SRR4302540.3734775/1‑94 (MQ=60)

                                                                GACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGA                              >  SRR4302540.1292456/1‑94 (MQ=60)

                                                                GACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGA                              >  SRR4302540.3753802/1‑94 (MQ=60)

                                                                GACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGA                              <  SRR4302540.6939585/94‑1 (MQ=60)

                                                                GACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGA                              >  SRR4302540.2823423/1‑94 (MQ=60)

                                                                 ACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAA                             >  SRR4302540.8576763/1‑94 (MQ=60)

                                                                   AAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAG                           >  SRR4302540.7506974/1‑94 (MQ=60)

                                                                    AACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGA                          >  SRR4302540.1730877/1‑94 (MQ=60)

                                                                    AACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGA                          >  SRR4302540.4445239/1‑94 (MQ=60)

                                                                      CATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAT                        >  SRR4302540.5933967/1‑94 (MQ=60)

                                                                      CATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAA                        >  SRR4302540.8065935/1‑94 (MQ=60)

                                                                       ATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAT                       <  SRR4302540.9523464/94‑1 (MQ=60)

                                                                        TGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATT                      >  SRR4302540.5074662/1‑94 (MQ=60)

                                                                         GACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTT                     <  SRR4302540.8885785/94‑1 (MQ=60)

                                                                          ACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTT                    >  SRR4302540.972351/1‑94 (MQ=60)

                                                                          ACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTT                    <  SRR4302540.7471096/94‑1 (MQ=60)

                                                                            ACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTA                  >  SRR4302540.3571693/1‑94 (MQ=60)

                                                                             CTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAA                 >  SRR4302540.6802940/1‑94 (MQ=60)

                                                                             CTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAA                 >  SRR4302540.2112513/1‑94 (MQ=60)

                                                                              TGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAG                <  SRR4302540.5880279/94‑1 (MQ=60)

                                                                              TGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAG                <  SRR4302540.725881/94‑1 (MQ=60)

                                                                               GAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGG               >  SRR4302540.3067748/1‑94 (MQ=60)

                                                                               GAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGC               >  SRR4302540.7200318/1‑94 (MQ=60)

                                                                                AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG              <  SRR4302540.8273431/94‑1 (MQ=60)

                                                                                AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG              <  SRR4302540.9396758/94‑1 (MQ=60)

                                                                                AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG              >  SRR4302540.8636575/1‑94 (MQ=60)

                                                                                AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG              >  SRR4302540.2752053/1‑94 (MQ=60)

                                                                                AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG              >  SRR4302540.7837987/1‑94 (MQ=60)

                                                                                 AAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGA             >  SRR4302540.107118/1‑94 (MQ=60)

                                                                                 AAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGA             >  SRR4302540.8494763/1‑94 (MQ=60)

                                                                                   ATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAG           <  SRR4302540.4987634/94‑1 (MQ=60)

                                                                                   ATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAG           <  SRR4302540.2500768/94‑1 (MQ=60)

                                                                                   ATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAG           <  SRR4302540.9533853/94‑1 (MQ=60)

                                                                                    TGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGC          <  SRR4302540.994607/94‑1 (MQ=60)

                                                                                    TGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTATAAGCGAAGC          <  SRR4302540.10009484/94‑1 (MQ=60)

                                                                                      TCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAA        <  SRR4302540.3767450/94‑1 (MQ=60)

                                                                                       CAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAAT       <  SRR4302540.6104322/94‑1 (MQ=60)

                                                                                        AAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATA      >  SRR4302540.8633952/1‑94 (MQ=60)

                                                                                        AAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATA      <  SRR4302540.9705787/94‑1 (MQ=60)

                                                                                        AAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATA      >  SRR4302540.6915511/1‑94 (MQ=60)

                                                                                         AAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT     >  SRR4302540.4355592/1‑94 (MQ=60)

                                                                                         AAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT     <  SRR4302540.8172492/94‑1 (MQ=60)

                                                                                         AAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT     <  SRR4302540.9491043/94‑1 (MQ=60)

                                                                                          AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT    <  SRR4302540.6227450/94‑1 (MQ=60)

                                                                                          AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT    >  SRR4302540.9381328/1‑94 (MQ=60)

                                                                                          AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT    >  SRR4302540.6678488/1‑94 (MQ=60)

                                                                                          AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT    <  SRR4302540.1857174/94‑1 (MQ=60)

                                                                                          AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAACAAATTTTTAAGCGAAGCAATATT    <  SRR4302540.6227447/94‑1 (MQ=60)

                                                                                           AAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC   >  SRR4302540.848704/1‑94 (MQ=60)

                                                                                           AAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC   <  SRR4302540.6941936/94‑1 (MQ=60)

                                                                                           AAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC   >  SRR4302540.5968615/1‑94 (MQ=60)

                                                                                            AGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCG  >  SRR4302540.6751621/1‑94 (MQ=60)

                                                                                            AGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCG  <  SRR4302540.8437702/94‑1 (MQ=60)

CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCG  >  NC_000913/1473653‑1473838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`