Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,473,746 |
A→G |
K195K (AAA→AAG) |
ydbD → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,473,746 | 0 | A | G | 100.0%
| 657.2
/ NA
| 204 | K195K (AAA→AAG) | ydbD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/102); total (102/102) |
Only 100 of 212 total aligned reads displayed.
TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT > NC_000913/1473656‑1473835
|
tGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgc < 2:3309404/93‑1 (MQ=255)
aCATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgcgc > 2:5711022/1‑93 (MQ=255)
aCATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgcgc > 1:2766394/1‑93 (MQ=255)
cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCt < 1:1814867/93‑1 (MQ=255)
cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCt < 1:1908326/93‑1 (MQ=255)
aaTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgat > 1:4847956/1‑93 (MQ=255)
aaTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgat > 1:4562548/1‑93 (MQ=255)
aTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatg < 1:5947503/93‑1 (MQ=255)
ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga < 2:2894396/93‑1 (MQ=255)
ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga < 1:3181907/93‑1 (MQ=255)
ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga < 1:2638793/93‑1 (MQ=255)
tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat < 2:3383574/93‑1 (MQ=255)
tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat > 1:5366813/1‑93 (MQ=255)
tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat < 1:4267/93‑1 (MQ=255)
gCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGata < 2:4598255/93‑1 (MQ=255)
gCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGata > 1:5962686/1‑93 (MQ=255)
gCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGata < 2:665682/93‑1 (MQ=255)
aCCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataat > 1:2970106/1‑93 (MQ=255)
ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata > 1:1548599/1‑93 (MQ=255)
ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata > 2:4266983/1‑93 (MQ=255)
ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata > 2:4895620/1‑93 (MQ=255)
ccTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataata > 1:2422387/1‑93 (MQ=255)
cTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAtaataa > 2:680730/1‑93 (MQ=255)
cTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAtaataa < 2:5919494/93‑1 (MQ=255)
tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa < 2:3590259/93‑1 (MQ=255)
tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa < 2:4453660/93‑1 (MQ=255)
tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa < 1:5833654/93‑1 (MQ=255)
tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa < 2:3819751/93‑1 (MQ=255)
tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa > 1:5014096/1‑93 (MQ=255)
ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc < 2:2700606/93‑1 (MQ=255)
ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc > 2:1360130/1‑93 (MQ=255)
ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc < 1:5263209/93‑1 (MQ=255)
tgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATcc < 1:751649/93‑1 (MQ=255)
gttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCt < 1:2477951/93‑1 (MQ=255)
gttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCt > 2:6141100/1‑93 (MQ=255)
gttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCt > 1:231331/1‑93 (MQ=255)
ttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTg > 1:4361758/1‑93 (MQ=255)
tgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGa > 2:3932444/1‑93 (MQ=255)
gCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAt < 2:5086293/93‑1 (MQ=255)
gCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAt > 1:3995118/1‑93 (MQ=255)
gCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAt > 1:3093077/1‑93 (MQ=255)
cGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATg < 2:2076373/93‑1 (MQ=255)
tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa > 2:3888869/1‑93 (MQ=255)
tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa > 2:5539179/1‑93 (MQ=255)
cTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCat > 2:3133569/1‑93 (MQ=255)
cTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCat < 2:5220196/93‑1 (MQ=255)
ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata > 1:325163/1‑93 (MQ=255)
ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata > 2:2219850/1‑93 (MQ=255)
ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata > 1:5502178/1‑93 (MQ=255)
tCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCatat < 1:5993029/93‑1 (MQ=255)
cGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatt > 2:3917371/1‑93 (MQ=255)
gACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATGATAAATCCTGATGCAtatta > 1:1115643/1‑93 (MQ=255)
gACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatta > 1:6255730/1‑93 (MQ=255)
gACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatta < 1:6233668/93‑1 (MQ=255)
gACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatta > 1:4452952/1‑93 (MQ=255)
aCAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtattat > 2:1585098/1‑93 (MQ=255)
aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg < 2:3429604/93‑1 (MQ=255)
aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg < 1:1536578/93‑1 (MQ=255)
aaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTgg > 1:923051/1‑93 (MQ=255)
aTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggg > 1:4753116/1‑93 (MQ=255)
aGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggggg < 1:4812652/93‑1 (MQ=255)
aGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggggg > 2:373964/1‑93 (MQ=255)
aaTTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaa < 2:5871347/93‑1 (MQ=255)
ttCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaatt > 2:5411562/1‑93 (MQ=255)
ttCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaatt < 2:3255955/93‑1 (MQ=255)
tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg < 2:1994859/93‑1 (MQ=255)
ggTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatga < 2:3153381/93‑1 (MQ=255)
gTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatgat > 1:3511090/1‑93 (MQ=255)
cGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGaa < 1:164111/93‑1 (MQ=255)
gTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAg > 2:4998085/1‑93 (MQ=255)
tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa > 2:827558/1‑93 (MQ=255)
tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa < 2:4299878/93‑1 (MQ=255)
tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa < 1:67347/93‑1 (MQ=255)
cGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATg > 2:1770313/1‑93 (MQ=255)
gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc > 2:1857788/1‑93 (MQ=255)
gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc > 2:4005127/1‑93 (MQ=255)
gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCATGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc < 2:1100672/93‑1 (MQ=255)
gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc < 1:3702908/93‑1 (MQ=255)
gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc > 1:2656140/1‑93 (MQ=255)
gACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTg < 2:1457079/93‑1 (MQ=255)
aCAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTga < 2:451584/93‑1 (MQ=255)
aaaCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaa < 2:5012780/93‑1 (MQ=255)
aaCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaag > 1:5742153/1‑93 (MQ=255)
aCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaaga > 2:2204865/1‑93 (MQ=255)
cATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaagaa > 1:4175386/1‑93 (MQ=255)
gACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAtt > 2:1332031/1‑93 (MQ=255)
acTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAttttt > 2:2641704/1‑93 (MQ=255)
aaaaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGc < 1:1995905/93‑1 (MQ=255)
aaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGa > 1:35275/1‑93 (MQ=255)
aaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGa < 1:1198493/93‑1 (MQ=255)
tGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAg > 2:4947328/1‑93 (MQ=255)
gTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGc < 1:4651241/93‑1 (MQ=255)
gTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGc > 1:6072103/1‑93 (MQ=255)
tCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCa > 1:6053249/1‑93 (MQ=255)
tCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCa < 1:125080/93‑1 (MQ=255)
cAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCaa > 1:378741/1‑93 (MQ=255)
aaaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAat > 2:4016716/1‑93 (MQ=255)
aaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAata > 1:2281655/1‑93 (MQ=255)
aaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAatat < 1:5017460/93‑1 (MQ=255)
aaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAatat < 2:227638/93‑1 (MQ=255)
|
TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT > NC_000913/1473656‑1473835
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC > NC_000913/1473653‑1473837
|
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG < SRR4302533.5084160/94‑1 (MQ=60)
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG < SRR4302533.3834336/94‑1 (MQ=60)
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG < SRR4302533.3270773/94‑1 (MQ=60)
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG > SRR4302533.5328689/1‑94 (MQ=60)
CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAG < SRR4302533.4178895/94‑1 (MQ=60)
AATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGG > SRR4302533.4004581/1‑94 (MQ=60)
AATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGG < SRR4302533.247958/94‑1 (MQ=60)
AATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGG < SRR4302533.2035604/94‑1 (MQ=60)
ATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGC > SRR4302533.5995856/1‑94 (MQ=60)
ATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGC < SRR4302533.1799934/94‑1 (MQ=60)
ATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGC < SRR4302533.816010/94‑1 (MQ=60)
TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCG > SRR4302533.5638514/1‑94 (MQ=60)
GACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGC > SRR4302533.1627514/1‑94 (MQ=60)
GACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGC > SRR4302533.2783353/1‑94 (MQ=60)
ACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCT < SRR4302533.2210921/94‑1 (MQ=60)
CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG < SRR4302533.1825946/94‑1 (MQ=60)
CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG < SRR4302533.1919966/94‑1 (MQ=60)
CATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTG < SRR4302533.6012303/94‑1 (MQ=60)
ATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGA > SRR4302533.3809445/1‑94 (MQ=60)
TAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGAT > SRR4302533.4877336/1‑94 (MQ=60)
TAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGAT > SRR4302533.4877335/1‑94 (MQ=60)
TAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGAT > SRR4302533.4590217/1‑94 (MQ=60)
AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG < SRR4302533.5040869/94‑1 (MQ=60)
AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG < SRR4302533.4538927/94‑1 (MQ=60)
AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG < SRR4302533.4649005/94‑1 (MQ=60)
AATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATG < SRR4302533.2547858/94‑1 (MQ=60)
ATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGA < SRR4302533.5983476/94‑1 (MQ=60)
TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT > SRR4302533.5399051/1‑94 (MQ=60)
TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT < SRR4302533.3201483/94‑1 (MQ=60)
TTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGAT < SRR4302533.2655014/94‑1 (MQ=60)
TGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATA < SRR4302533.4304/94‑1 (MQ=60)
TGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATA > SRR4302533.5998758/1‑94 (MQ=60)
GCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAA > SRR4302533.4025701/1‑94 (MQ=60)
CACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAAT > SRR4302533.6106207/1‑94 (MQ=60)
CACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAAT > SRR4302533.3543157/1‑94 (MQ=60)
CACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAAT > SRR4302533.2988265/1‑94 (MQ=60)
ACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATA > SRR4302533.2437340/1‑94 (MQ=60)
ACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATA > SRR4302533.1557931/1‑94 (MQ=60)
CTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA < SRR4302533.1135386/94‑1 (MQ=60)
CTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA > SRR4302533.858542/1‑94 (MQ=60)
CTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAA > SRR4302533.5044474/1‑94 (MQ=60)
TGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAT < SRR4302533.5868911/94‑1 (MQ=60)
TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC < SRR4302533.4833024/94‑1 (MQ=60)
TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCC < SRR4302533.5294802/94‑1 (MQ=60)
TTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATATCAAAAAGGCGCTGATGATAATAAATCC > SRR4302533.5047041/1‑94 (MQ=60)
TGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCT > SRR4302533.232762/1‑94 (MQ=60)
TGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCT < SRR4302533.756077/94‑1 (MQ=60)
GTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTG < SRR4302533.2099538/94‑1 (MQ=60)
GTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTG > SRR4302533.4388085/1‑94 (MQ=60)
GTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTG < SRR4302533.2493235/94‑1 (MQ=60)
TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT > SRR4302533.3076009/1‑94 (MQ=60)
TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT > SRR4302533.4019443/1‑94 (MQ=60)
TGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGAT > SRR4302533.3112093/1‑94 (MQ=60)
GTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCA < SRR4302533.1785618/94‑1 (MQ=60)
TCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAT < SRR4302533.5008590/94‑1 (MQ=60)
CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA < SRR4302533.99145/94‑1 (MQ=60)
CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA > SRR4302533.5986407/1‑94 (MQ=60)
CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA > SRR4302533.5535376/1‑94 (MQ=60)
CTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATA > SRR4302533.327146/1‑94 (MQ=60)
TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT < SRR4302533.5474191/94‑1 (MQ=60)
TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT > SRR4302533.1924937/1‑94 (MQ=60)
TTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATAT > SRR4302533.6285422/1‑94 (MQ=60)
TCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATT < SRR4302533.6029332/94‑1 (MQ=60)
CGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATGATAAATCCTGATGCATATTA > SRR4302533.1122263/1‑94 (MQ=60)
CGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTA > SRR4302533.4479874/1‑94 (MQ=60)
CGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTA > SRR4302533.6293140/1‑94 (MQ=60)
GACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTAT < SRR4302533.6270991/94‑1 (MQ=60)
ACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATT > SRR4302533.2671042/1‑94 (MQ=60)
ACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATT < SRR4302533.3235878/94‑1 (MQ=60)
AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG > SRR4302533.928474/1‑94 (MQ=60)
AAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGG < SRR4302533.1545809/94‑1 (MQ=60)
AATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATATTAAATCCTGATGCATATTATTGGG < SRR4302533.3695994/94‑1 (MQ=60)
AATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGG < SRR4302533.1279761/94‑1 (MQ=60)
AATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGG > SRR4302533.4781930/1‑94 (MQ=60)
AGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGC < SRR4302533.4841820/94‑1 (MQ=60)
TGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTA > SRR4302533.4119548/1‑94 (MQ=60)
GAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAA > SRR4302533.733754/1‑94 (MQ=60)
GAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAA > SRR4302533.874638/1‑94 (MQ=60)
TCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAA > SRR4302533.3115356/1‑94 (MQ=60)
ATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATG > SRR4302533.6053936/1‑94 (MQ=60)
GGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGAT > SRR4302533.3532733/1‑94 (MQ=60)
GTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATG > SRR4302533.1250998/1‑94 (MQ=60)
GTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATG > SRR4302533.653977/1‑94 (MQ=60)
CCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAA > SRR4302533.2309301/1‑94 (MQ=60)
CGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAG < SRR4302533.165155/94‑1 (MQ=60)
CGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAG < SRR4302533.2755302/94‑1 (MQ=60)
GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA > SRR4302533.3923642/1‑94 (MQ=60)
GTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGA > SRR4302533.3273179/1‑94 (MQ=60)
TGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAT < SRR4302533.67787/94‑1 (MQ=60)
AGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTC > SRR4302533.2672454/1‑94 (MQ=60)
GTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCT < SRR4302533.3725650/94‑1 (MQ=60)
TGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTG < SRR4302533.5847379/94‑1 (MQ=60)
TGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTG > SRR4302533.1919105/1‑94 (MQ=60)
ACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAA > SRR4302533.4428381/1‑94 (MQ=60)
AAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAG > SRR4302533.5776803/1‑94 (MQ=60)
ACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAA > SRR4302533.4200687/1‑94 (MQ=60)
TGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATT < SRR4302533.2465799/94‑1 (MQ=60)
CACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTT > SRR4302533.1553981/1‑94 (MQ=60)
CACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTT < SRR4302533.5181108/94‑1 (MQ=60)
TGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAG < SRR4302533.6191514/94‑1 (MQ=60)
TGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAG < SRR4302533.3075735/94‑1 (MQ=60)
TGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAG > SRR4302533.5319678/1‑94 (MQ=60)
AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG < SRR4302533.2008165/94‑1 (MQ=60)
AAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCG < SRR4302533.4315051/94‑1 (MQ=60)
AAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGA > SRR4302533.35512/1‑94 (MQ=60)
AATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAA < SRR4302533.2968512/94‑1 (MQ=60)
AATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAA < SRR4302533.1205693/94‑1 (MQ=60)
TGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGC > SRR4302533.6108837/1‑94 (MQ=60)
GTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCA > SRR4302533.4698231/1‑94 (MQ=60)
GTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCA > SRR4302533.6089910/1‑94 (MQ=60)
GTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCA < SRR4302533.4679423/94‑1 (MQ=60)
GTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCA < SRR4302533.4221565/94‑1 (MQ=60)
TCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAA > SRR4302533.381022/1‑94 (MQ=60)
TCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAA < SRR4302533.125865/94‑1 (MQ=60)
TCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAA < SRR4302533.5928466/94‑1 (MQ=60)
CAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAAT < SRR4302533.2398156/94‑1 (MQ=60)
AAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATA > SRR4302533.2295779/1‑94 (MQ=60)
AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT > SRR4302533.3664764/1‑94 (MQ=60)
AAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATT < SRR4302533.5047854/94‑1 (MQ=60)
AAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC < SRR4302533.1769534/94‑1 (MQ=60)
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CAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTC > NC_000913/1473653‑1473837
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
