Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,481,375	C→T	I97I (ATC→ATT)	hrpA →	helicase, ATP‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,481,375	0	C	T	100.0%	1084.2 / NA	294	I97I (ATC→ATT)	hrpA	helicase, ATP‑dependent
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (123/171); total (123/171)

Only 100 of 312 total aligned reads displayed.

ACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA  >  NC_000913/1481285‑1481464

gcGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgt                                                                                         <  1:5884847/92‑1 (MQ=255)

 cGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtc                                                                                        <  2:9563980/93‑1 (MQ=255)

  gACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtcg                                                                                       <  1:5789929/93‑1 (MQ=255)

  gACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtcg                                                                                       <  1:3335157/93‑1 (MQ=255)

   aCCGGAAATTACTTATCCTGACAATTTGCCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGc                                                                                      <  2:5583646/93‑1 (MQ=255)

   aCCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGc                                                                                      <  1:13414/93‑1 (MQ=255)

   aCCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGc                                                                                      >  1:10005155/1‑93 (MQ=255)

     cGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCg                                                                                    <  1:9532458/93‑1 (MQ=255)

     cGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCg                                                                                    <  2:7607595/93‑1 (MQ=255)

       gAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCggg                                                                                  >  1:9333741/1‑93 (MQ=255)

        aaaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCgggg                                                                                 >  2:5892360/1‑93 (MQ=255)

         aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                                <  2:4640126/93‑1 (MQ=255)

         aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                                >  2:7140220/1‑93 (MQ=255)

          aTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaa                                                                               >  1:4202958/1‑93 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              <  1:3291293/93‑1 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              <  2:9211664/93‑1 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              <  1:7623474/93‑1 (MQ=255)

             aCTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACg                                                                            >  1:3159383/1‑93 (MQ=255)

              ctcaTCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACgg                                                                           <  2:3801534/90‑1 (MQ=255)

              cTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACgg                                                                           <  1:4048974/93‑1 (MQ=255)

               ttATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACggg                                                                          <  2:7307271/93‑1 (MQ=255)

                 aTCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGtt                                                                        <  1:2027427/93‑1 (MQ=255)

                  tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                       <  2:6604602/93‑1 (MQ=255)

                  tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                       <  1:984242/93‑1 (MQ=255)

                   ccTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCt                                                                      <  2:7683419/93‑1 (MQ=255)

                    cTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTg                                                                     >  1:1045889/1‑93 (MQ=255)

                     tGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTgg                                                                    >  1:3892597/1‑93 (MQ=255)

                      gACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGt                                                                   >  1:6309317/1‑93 (MQ=255)

                       aCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTa                                                                  >  1:5496042/1‑93 (MQ=255)

                        cAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTaa                                                                 >  1:8913000/1‑93 (MQ=255)

                        cAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTaa                                                                 <  1:7100473/93‑1 (MQ=255)

                          aTTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTaaaa                                                               <  2:9363676/93‑1 (MQ=255)

                           tttACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGACTGTCGCCGGGGAAACGGGTTCTGGTAAAAc                                                              <  2:4083136/93‑1 (MQ=255)

                            ttACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACg                                                             >  2:7526240/1‑93 (MQ=255)

                            ttACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACg                                                             <  1:8661402/93‑1 (MQ=255)

                              aCCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGAc                                                           <  2:6711647/93‑1 (MQ=255)

                                cGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTc                                                         <  1:5714513/93‑1 (MQ=255)

                                cGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTc                                                         >  1:7830382/1‑93 (MQ=255)

                                 ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                        >  2:1298430/1‑93 (MQ=255)

                                 ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                        <  1:7516793/93‑1 (MQ=255)

                                 ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                        >  1:2633705/1‑93 (MQ=255)

                                   ttAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                      <  2:4033703/93‑1 (MQ=255)

                                      gTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTAc                                                   >  2:8462090/1‑93 (MQ=255)

                                       tCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTAcc                                                  >  2:958313/1‑93 (MQ=255)

                                         aGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGa                                                >  2:1444250/1‑93 (MQ=255)

                                          gAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaa                                               >  2:5118967/1‑93 (MQ=255)

                                          gAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaa                                               <  2:2355613/93‑1 (MQ=255)

                                             aaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAt                                            <  2:79515/93‑1 (MQ=255)

                                             aaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAt                                            >  2:2966692/1‑93 (MQ=255)

                                                aCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTg                                         >  1:29270/1‑93 (MQ=255)

                                                  aGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTa                                       >  2:6834207/1‑93 (MQ=255)

                                                  aGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTa                                       <  1:8565545/93‑1 (MQ=255)

                                                   ggACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAt                                      <  1:1140035/93‑1 (MQ=255)

                                                     aCATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATgg                                    <  2:3679310/93‑1 (MQ=255)

                                                      cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                   <  1:7426393/93‑1 (MQ=255)

                                                      cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                   <  2:1722821/93‑1 (MQ=255)

                                                      aaTTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                   <  2:2791594/92‑1 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 >  2:7725377/1‑93 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 <  2:7198990/93‑1 (MQ=255)

                                                          ctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTg                               >  1:6505714/1‑93 (MQ=255)

                                                          ctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTg                               <  2:5936525/93‑1 (MQ=255)

                                                          caggAAGCGATGCGTGATCAGCAGGTGGTGAGTGTCGCCGGGGAAAGGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTg                               <  1:3738522/90‑1 (MQ=255)

                                                           tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                              <  1:612724/93‑1 (MQ=255)

                                                           tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                              <  1:6870631/93‑1 (MQ=255)

                                                           tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                              >  1:5111062/1‑93 (MQ=255)

                                                            cGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTggg                             <  2:9033296/93‑1 (MQ=255)

                                                             gAAGCGATTCGTGATCACCCGGTGGTGATTGTCGCCGGGGAAACGGGGTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            >  2:4926676/1‑93 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            <  2:9858512/93‑1 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            <  2:6568343/93‑1 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            <  2:5821304/93‑1 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            >  1:1764798/1‑93 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            >  2:4795169/1‑93 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            >  1:8436070/1‑93 (MQ=255)

                                                              aaGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgc                           <  1:5355578/93‑1 (MQ=255)

                                                                gCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcgc                         <  2:4522009/93‑1 (MQ=255)

                                                                  gATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCgg                       <  1:921149/93‑1 (MQ=255)

                                                                  gATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCgg                       >  2:3187986/1‑93 (MQ=255)

                                                                   aTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                      >  1:6035944/1‑93 (MQ=255)

                                                                   aTTCATGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                      <  1:4650899/93‑1 (MQ=255)

                                                                    ttCGTGGTCACCAGGTGGTGATTGTCGCCGAGGAAACTGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGa                     <  1:3570073/93‑1 (MQ=255)

                                                                     tCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGAt                    <  2:186739/93‑1 (MQ=255)

                                                                       gTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTa                  <  1:2210714/93‑1 (MQ=255)

                                                                        tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa                 >  2:3036676/1‑93 (MQ=255)

                                                                         gATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaaa                <  1:7916918/93‑1 (MQ=255)

                                                                         gATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaaa                >  2:8106237/1‑93 (MQ=255)

                                                                         gATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTGCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaaa                <  1:1603643/93‑1 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAcg           >  2:4685066/1‑92 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt           >  2:9711865/1‑93 (MQ=255)

                                                                               cAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTg          >  2:6342827/1‑93 (MQ=255)

                                                                                aGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa         <  1:6992156/93‑1 (MQ=255)

                                                                                aGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa         <  2:9793047/93‑1 (MQ=255)

                                                                                aGGTGGTGATTGTCGCCGGGGAAACCGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa         >  1:2287632/1‑93 (MQ=255)

                                                                                 ggtggtGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGAt        <  1:911335/93‑1 (MQ=255)

                                                                                 ggtggtGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGAt        >  2:6006123/1‑93 (MQ=255)

                                                                                  gtggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATc       >  1:637944/1‑93 (MQ=255)

                                                                                  gtggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATc       >  1:4423153/1‑93 (MQ=255)

                                                                                   tggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCg      <  1:6618163/93‑1 (MQ=255)

                                                                                   tggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCg      >  2:8608090/1‑93 (MQ=255)

                                                                                   tggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGAGGGATTAAAGGACTGATCg      >  2:7037273/1‑93 (MQ=255)

                                                                                       gATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCa  <  2:4477278/93‑1 (MQ=255)

ACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA  >  NC_000913/1481285‑1481464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCATA  >  NC_000913/1481282‑1481466

GGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATT                                                                                             <  SRR4302540.4135252/94‑1 (MQ=60)

GGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATT                                                                                             >  SRR4302540.7052216/1‑94 (MQ=60)

GGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATT                                                                                             <  SRR4302540.7713299/94‑1 (MQ=60)

 GCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTG                                                                                            >  SRR4302540.3386401/1‑94 (MQ=60)

  CGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGT                                                                                           >  SRR4302540.9848338/1‑94 (MQ=60)

   GCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTC                                                                                          <  SRR4302540.1123766/94‑1 (MQ=60)

   GCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTC                                                                                          <  SRR4302540.1123767/94‑1 (MQ=60)

   GCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTC                                                                                          <  SRR4302540.5949867/94‑1 (MQ=60)

    CGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCG                                                                                         <  SRR4302540.1820222/94‑1 (MQ=60)

    CGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCG                                                                                         <  SRR4302540.6201403/94‑1 (MQ=60)

    CGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGGGATTGTCG                                                                                         >  SRR4302540.7549636/1‑94 (MQ=60)

     GACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGC                                                                                        >  SRR4302540.10121687/1‑94 (MQ=60)

     GACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGC                                                                                        <  SRR4302540.5853900/94‑1 (MQ=60)

     GACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGC                                                                                        <  SRR4302540.3371782/94‑1 (MQ=60)

      ACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCC                                                                                       <  SRR4302540.13564/94‑1 (MQ=60)

       CCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCG                                                                                      >  SRR4302540.3009740/1‑94 (MQ=60)

        CGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGG                                                                                     >  SRR4302540.3594392/1‑94 (MQ=60)

        CGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGG                                                                                     <  SRR4302540.9645308/94‑1 (MQ=60)

         GGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGG                                                                                    >  SRR4302540.9445022/1‑94 (MQ=60)

          gaaattgttgagCCTGACAGTTTACCGGTTAGTCAGAAAAAGCAGGACAGTTTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGG                                                                                   <  SRR4302540.14327/82‑1 (MQ=60)

            AATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAA                                                                                 >  SRR4302540.4248697/1‑94 (MQ=60)

              atacctatcccgaacattttcccgttaagcaagaaaaaccaggccatccCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAAC                                                                               <  SRR4302540.4654448/45‑1 (MQ=60)

              TTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAAC                                                                               <  SRR4302540.7709210/94‑1 (MQ=60)

              TTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAAC                                                                               <  SRR4302540.3327302/94‑1 (MQ=60)

               TACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACG                                                                              >  SRR4302540.3193759/1‑94 (MQ=60)

               TACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACG                                                                              >  SRR4302540.7342314/1‑94 (MQ=60)

               TACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACG                                                                              <  SRR4302540.7951485/94‑1 (MQ=60)

                TCTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGG                                                                             <  SRR4302540.947802/94‑1 (MQ=60)

                ACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGG                                                                             <  SRR4302540.6148885/94‑1 (MQ=60)

                 CTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGG                                                                            <  SRR4302540.4092630/94‑1 (MQ=60)

                  TTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGT                                                                           <  SRR4302540.516864/94‑1 (MQ=60)

                  TTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGT                                                                           >  SRR4302540.8075524/1‑94 (MQ=60)

                  TTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGT                                                                           >  SRR4302540.3308443/1‑94 (MQ=60)

                    ATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTC                                                                         <  SRR4302540.5689142/94‑1 (MQ=60)

                    ATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTC                                                                         <  SRR4302540.2049323/94‑1 (MQ=60)

                    ATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTC                                                                         <  SRR4302540.2049322/94‑1 (MQ=60)

                     TCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCT                                                                        <  SRR4302540.994308/94‑1 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCTATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       <  SRR4302540.225463/94‑1 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       >  SRR4302540.1056522/1‑94 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       >  SRR4302540.870581/1‑94 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       >  SRR4302540.8095110/1‑94 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       >  SRR4302540.1261783/1‑94 (MQ=60)

                      CCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTG                                                                       <  SRR4302540.225464/94‑1 (MQ=60)

                       CTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGG                                                                      >  SRR4302540.3934854/1‑94 (MQ=60)

                       CTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCGCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGG                                                                      <  SRR4302540.3331912/94‑1 (MQ=60)

                        TGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGT                                                                     >  SRR4302540.6379576/1‑94 (MQ=60)

                        TGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGT                                                                     >  SRR4302540.6379577/1‑94 (MQ=60)

                         GACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTA                                                                    >  SRR4302540.5556553/1‑94 (MQ=60)

                         GACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTA                                                                    <  SRR4302540.2091253/94‑1 (MQ=60)

                          ACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAA                                                                   >  SRR4302540.9016214/1‑94 (MQ=60)

                          ACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAA                                                                   >  SRR4302540.9479960/1‑94 (MQ=60)

                           CAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAA                                                                  <  SRR4302540.7179480/94‑1 (MQ=60)

                             ATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAAC                                                                <  SRR4302540.6973802/94‑1 (MQ=60)

                             ATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAAC                                                                <  SRR4302540.6601805/94‑1 (MQ=60)

                             ATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAAC                                                                <  SRR4302540.7981065/94‑1 (MQ=60)

                             ATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAAC                                                                <  SRR4302540.5867499/94‑1 (MQ=60)

                               TTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGA                                                              <  SRR4302540.5859212/94‑1 (MQ=60)

                               TTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGA                                                              <  SRR4302540.8762002/94‑1 (MQ=60)

                                 ACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACT                                                            >  SRR4302540.7032943/1‑94 (MQ=60)

                                  CCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTC                                                           >  SRR4302540.7921874/1‑94 (MQ=60)

                                   cggggaggCAGAAAAAACAGGACAGACACGAAGCGAAGCGTGATCACCAGGAGGGGATCGTCGCCGGGGAAACGGGGTCAGGGAAAACGACGCA                                                          >  SRR4302540.9038235/9‑94 (MQ=23)

                                   CGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCA                                                          <  SRR4302540.5777415/94‑1 (MQ=60)

                                   CGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCA                                                          <  SRR4302540.7327803/94‑1 (MQ=60)

                                   CGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCA                                                          >  SRR4302540.2662225/1‑94 (MQ=60)

                                    GGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAG                                                         <  SRR4302540.7600837/94‑1 (MQ=60)

                                    GGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAG                                                         >  SRR4302540.1220898/1‑94 (MQ=60)

                                    GGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAG                                                         >  SRR4302540.3664795/1‑94 (MQ=60)

                                    GGTTAGGCATAAAAAACAGGACATCCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAG                                                         <  SRR4302540.5122021/94‑1 (MQ=60)

                                    GGTGAGTCAGAAAAAACAGGACATTCTCGAAGCGGTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAG                                                         <  SRR4302540.7600841/94‑1 (MQ=60)

                                     GTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGT                                                        <  SRR4302540.7701890/94‑1 (MQ=60)

                                      TTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTT                                                       >  SRR4302540.3144847/1‑94 (MQ=60)

                                         GTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACC                                                    <  SRR4302540.9386706/94‑1 (MQ=60)

                                          TCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCG                                                   <  SRR4302540.613280/94‑1 (MQ=60)

                                          TCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCG                                                   <  SRR4302540.6021384/94‑1 (MQ=60)

                                          TCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCG                                                   <  SRR4302540.1773305/94‑1 (MQ=60)

                                          TCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCG                                                   <  SRR4302540.4399737/94‑1 (MQ=60)

                                           CAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGA                                                  <  SRR4302540.3960885/94‑1 (MQ=60)

                                            AGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAA                                                 <  SRR4302540.4062568/94‑1 (MQ=60)

                                            AGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAA                                                 >  SRR4302540.5820399/1‑94 (MQ=60)

                                              AAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAA                                               >  SRR4302540.9153653/1‑94 (MQ=60)

                                               AAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAT                                              >  SRR4302540.9379283/1‑94 (MQ=60)

                                               AAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAT                                              <  SRR4302540.5807920/94‑1 (MQ=60)

                                               AAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAT                                              <  SRR4302540.5232876/94‑1 (MQ=60)

                                               AAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAT                                              <  SRR4302540.8632113/94‑1 (MQ=60)

                                                 AAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCT                                            <  SRR4302540.1564869/94‑1 (MQ=60)

                                                  TACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTG                                           >  SRR4302540.29578/1‑94 (MQ=60)

                                                  AACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTG                                           <  SRR4302540.4542778/94‑1 (MQ=60)

                                                  AACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTG                                           <  SRR4302540.4420108/94‑1 (MQ=60)

                                                   ACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAACCGACTCAGTTACCGAAAATCTGT                                          >  SRR4302540.395788/1‑94 (MQ=60)

                                                   ACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGT                                          >  SRR4302540.2598029/1‑94 (MQ=60)

                                                    CAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTA                                         >  SRR4302540.3465870/1‑94 (MQ=60)

                                                     AGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAT                                        <  SRR4302540.10148392/94‑1 (MQ=60)

                                                     AGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAT                                        <  SRR4302540.160726/94‑1 (MQ=60)

                                                     AGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAT                                        >  SRR4302540.6439735/1‑94 (MQ=60)

                                                     AGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAT                                        <  SRR4302540.8665016/94‑1 (MQ=60)

                                                     AGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAT                                        <  SRR4302540.7085277/94‑1 (MQ=60)

                                                      GGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATG                                       >  SRR4302540.4102166/1‑94 (MQ=60)

                                                      GGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATG                                       <  SRR4302540.1151958/94‑1 (MQ=60)

                                                        ACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGA                                     <  SRR4302540.5487046/94‑1 (MQ=60)

                                                         CATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCaagcgctag                                    >  SRR4302540.8618227/1‑85 (MQ=60)

                                                         CATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAG                                    <  SRR4302540.7509124/94‑1 (MQ=60)

                                                         CATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAG                                    <  SRR4302540.7509125/94‑1 (MQ=60)

                                                          ATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGC                                   <  SRR4302540.5422755/94‑1 (MQ=60)

                                                            TCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTG                                 >  SRR4302540.6578019/1‑94 (MQ=60)

                                                            TCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTG                                 >  SRR4302540.6578017/1‑94 (MQ=60)

                                                             cagGAAGCGATGCGTGATCAGCAGGTGGTGAGTGTCGCCGGGGAAAGGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGG                                <  SRR4302540.3779309/91‑1 (MQ=60)

                                                             CTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGG                                <  SRR4302540.9925354/94‑1 (MQ=60)

                                                             CTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGG                                <  SRR4302540.3779310/94‑1 (MQ=60)

                                                             CTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGG                                >  SRR4302540.5166383/1‑94 (MQ=60)

                                                             CTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGG                                >  SRR4302540.6099846/1‑94 (MQ=60)

                                                              TCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGG                               <  SRR4302540.619266/94‑1 (MQ=60)

                                                              TCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGG                               <  SRR4302540.6946791/94‑1 (MQ=60)

                                                               tcttccgatctagcgcttCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGG                              >  SRR4302540.1494765/19‑94 (MQ=60)

                                                               CGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGG                              >  SRR4302540.8534011/1‑94 (MQ=60)

                                                               CGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGG                              >  SRR4302540.1783940/1‑94 (MQ=60)

                                                               CGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGG                              >  SRR4302540.929854/1‑94 (MQ=60)

                                                                GAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGC                             >  SRR4302540.2886089/1‑94 (MQ=60)

                                                                GAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGC                             >  SRR4302540.4769704/1‑94 (MQ=60)

                                                                GAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGC                             >  SRR4302540.3862396/1‑94 (MQ=60)

                                                                 AAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCG                            <  SRR4302540.5414393/94‑1 (MQ=60)

                                                                 AAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCG                            <  SRR4302540.4232049/94‑1 (MQ=60)

                                                                    CGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGG                         <  SRR4302540.7102547/94‑1 (MQ=60)

                                                                    CGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGG                         >  SRR4302540.6877775/1‑94 (MQ=60)

                                                                     GATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGG                        >  SRR4302540.6102951/1‑94 (MQ=60)

                                                                     GATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGG                        >  SRR4302540.2669924/1‑94 (MQ=60)

                                                                     GATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGG                        <  SRR4302540.930867/94‑1 (MQ=60)

                                                                      ATTCATGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGA                       <  SRR4302540.4700673/94‑1 (MQ=60)

                                                                       TTCGTGGTCACCAGGTGGTGATTGTCGCCGAGGAAACTGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGAT                      <  SRR4302540.3609070/94‑1 (MQ=60)

                                                                       TTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGAT                      <  SRR4302540.5835460/94‑1 (MQ=60)

                                                                       TTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAGCTGTATGGAGCTGGGGCGCGGGAT                      <  SRR4302540.1025245/94‑1 (MQ=60)

                                                                          GTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTCA                   >  SRR4302540.3210014/1‑94 (MQ=60)

                                                                          GTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAA                   <  SRR4302540.2234591/94‑1 (MQ=60)

                                                                            GATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAG                 <  SRR4302540.8009208/94‑1 (MQ=60)

                                                                            GATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAG                 <  SRR4302540.1621187/94‑1 (MQ=60)

                                                                            GATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAG                 <  SRR4302540.6649639/94‑1 (MQ=60)

                                                                            GATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTGCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAG                 <  SRR4302540.1621186/94‑1 (MQ=60)

                                                                             ATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGG                <  SRR4302540.8798294/94‑1 (MQ=60)

                                                                             ATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGG                <  SRR4302540.9023719/94‑1 (MQ=60)

                                                                               CACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAC              <  SRR4302540.3368303/94‑1 (MQ=60)

                                                                               CACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAC              <  SRR4302540.864185/94‑1 (MQ=60)

                                                                               CACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAC              >  SRR4302540.8711547/1‑94 (MQ=60)

                                                                                CCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACT             <  SRR4302540.2468065/94‑1 (MQ=60)

                                                                                  CAGGTGGTGATTGTCGCCGGGGAAACCGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGA           >  SRR4302540.2312233/1‑94 (MQ=60)

                                                                                   AGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGAT          <  SRR4302540.7069767/94‑1 (MQ=60)

                                                                                   AGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGAT          <  SRR4302540.6573069/94‑1 (MQ=60)

                                                                                    GGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATC         <  SRR4302540.920979/94‑1 (MQ=60)

                                                                                    GGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATC         >  SRR4302540.644730/1‑94 (MQ=60)

                                                                                    GGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATC         <  SRR4302540.8952710/94‑1 (MQ=60)

                                                                                    GGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATC         >  SRR4302540.4471079/1‑94 (MQ=60)

                                                                                     GTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCG        <  SRR4302540.1001340/94‑1 (MQ=60)

                                                                                      TGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGG       <  SRR4302540.6691453/94‑1 (MQ=60)

                                                                                      TGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGG       <  SRR4302540.6691452/94‑1 (MQ=60)

                                                                                      TGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGG       <  SRR4302540.1809573/94‑1 (MQ=60)

                                                                                       GGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGC      >  SRR4302540.926936/1‑94 (MQ=60)

                                                                                       GGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGC      >  SRR4302540.6247489/1‑94 (MQ=60)

                                                                                       GGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGC      >  SRR4302540.236267/1‑94 (MQ=60)

                                                                                        GTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCC     <  SRR4302540.3667637/94‑1 (MQ=60)

                                                                                         TGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA    >  SRR4302540.6998486/1‑94 (MQ=60)

                                                                                         TGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA    <  SRR4302540.5674958/94‑1 (MQ=60)

                                                                                          GATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCAT   <  SRR4302540.7786318/94‑1 (MQ=60)

                                                                                          GATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCAT   <  SRR4302540.7786316/94‑1 (MQ=60)

                                                                                          GATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCAT   >  SRR4302540.4788026/1‑94 (MQ=60)

                                                                                           ATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCATA  >  SRR4302540.5715654/1‑94 (MQ=60)

GGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCATA  >  NC_000913/1481282‑1481466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`