Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,532,150 |
A→G |
T35A (ACC→GCC) |
b1463 → |
putative N‑hydroxyarylamine O‑acetyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,532,150 | 0 | A | G | 100.0%
| 915.4
/ NA
| 284 | T35A (ACC→GCC) | b1463 | putative N‑hydroxyarylamine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (133/151); total (133/151) |
Only 100 of 290 total aligned reads displayed.
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGT > NC_000913/1532060‑1532239
|
tGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCa < 2:4735957/93‑1 (MQ=255)
tGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGCGCATTGCACCTGAAACACAATTGCGCCa < 2:3217387/93‑1 (MQ=255)
gAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAt > 1:8911404/1‑93 (MQ=255)
gAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAt > 1:2572326/1‑93 (MQ=255)
gAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAt > 1:288517/1‑93 (MQ=255)
aTCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTc < 1:6923126/93‑1 (MQ=255)
aTCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTc > 2:6697040/1‑93 (MQ=255)
tCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTcc < 1:8513436/93‑1 (MQ=255)
tCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTcc < 1:2942331/93‑1 (MQ=255)
cACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCg < 2:4439746/93‑1 (MQ=255)
cTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGtt < 1:10040692/93‑1 (MQ=255)
cTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGtt < 2:253887/93‑1 (MQ=255)
tATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGttt < 2:9422345/93‑1 (MQ=255)
tATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGttt > 1:3685212/1‑93 (MQ=255)
tATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGttt < 1:4094127/93‑1 (MQ=255)
ttGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGaaa > 1:8735250/1‑93 (MQ=255)
gCCCGCATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTGCGTGCATTGCACCTGAAACACAATTGCGCCAGTCCGTTTGAAAAc > 1:8975698/1‑93 (MQ=255)
cccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAcc > 1:6371844/1‑93 (MQ=255)
ccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCt < 2:4573959/93‑1 (MQ=255)
ccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCt > 2:8484318/1‑93 (MQ=255)
cGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTc < 2:8093438/93‑1 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa > 2:1217606/1‑93 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa > 1:555980/1‑93 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa > 1:4914687/1‑93 (MQ=255)
aTTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAc < 2:8270308/93‑1 (MQ=255)
tAACTGCTCGGGAGCTGCTCCGGTAAATATTGATACGCTTCGTCCATGGCCCCTAAAACACATTTGCGCCA‑TCCGTTTGAAAACCTCGACGtt < 2:1351512/93‑1 (MQ=255)
aaCTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGtt < 1:3086731/93‑1 (MQ=255)
aCTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGttt > 1:4441888/1‑93 (MQ=255)
aCTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGttt < 2:8608874/93‑1 (MQ=255)
cTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGtttt > 1:4677983/1‑93 (MQ=255)
cTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGtttt < 2:6797577/93‑1 (MQ=255)
ggTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCCTTCCGTTTGAAAACCTCGACGTTTtgc > 1:149576/1‑93 (MQ=255)
ggTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCTGTTTGAAAACCTCGACGTTTtgc < 2:3906307/93‑1 (MQ=255)
gTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgct < 1:740354/93‑1 (MQ=255)
gTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgct > 2:5265576/1‑93 (MQ=255)
ggAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCg < 2:6687531/93‑1 (MQ=255)
gAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGa < 1:6731210/93‑1 (MQ=255)
aGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAg < 2:174267/93‑1 (MQ=255)
gctgctGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAgg < 1:9600740/93‑1 (MQ=255)
cgctgcGGTCAATATTGATACGCGTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑a < 2:7852477/92‑1 (MQ=255)
gctgcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑aa > 1:2059174/1‑93 (MQ=255)
gcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATa > 2:3992204/1‑93 (MQ=255)
gcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATa > 2:1128009/1‑93 (MQ=255)
gcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATa > 1:6587714/1‑93 (MQ=255)
cGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATAc < 1:7462873/93‑1 (MQ=255)
ggTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACa > 2:2776699/1‑93 (MQ=255)
aaTATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCtt > 2:1805576/1‑93 (MQ=255)
aaTATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCtt > 2:4880394/1‑93 (MQ=255)
aaTATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCtt < 1:5935810/93‑1 (MQ=255)
aaTATTGATACGCTTCGTGCATTGCACCTGAAACACAAATGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCtt > 2:6449362/1‑93 (MQ=255)
tatTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGa < 1:6442019/93‑1 (MQ=255)
tatTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGa < 2:7160772/93‑1 (MQ=255)
atTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGAt < 1:6984364/93‑1 (MQ=255)
ttGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATa < 1:9888153/93‑1 (MQ=255)
ttGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATa > 2:9641760/1‑93 (MQ=255)
gATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaat < 1:5029616/93‑1 (MQ=255)
gATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaat < 2:2389123/93‑1 (MQ=255)
tACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaatca < 1:7497320/93‑1 (MQ=255)
aCGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaatcaa > 2:2780573/1‑93 (MQ=255)
cGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaatcaat > 2:7497883/1‑93 (MQ=255)
cGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaatcaat < 2:3812779/93‑1 (MQ=255)
cGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATaatcaat < 1:7067481/93‑1 (MQ=255)
cTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGCGGG‑AAATACAGCTTGATAATCAATCg > 2:4171829/1‑93 (MQ=255)
cTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAAATACAGCTTGATaatcaatc > 1:3298780/1‑93 (MQ=255)
cTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCg > 1:178403/1‑93 (MQ=255)
ttCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGc > 2:7384697/1‑93 (MQ=255)
ttCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGc > 1:1978754/1‑93 (MQ=255)
tCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGcc > 1:429122/1‑93 (MQ=255)
cGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCg < 2:3601020/93‑1 (MQ=255)
cGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCg < 2:2135024/93‑1 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCgg > 2:7220871/1‑93 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCgg > 1:5739955/1‑93 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCgg > 1:7840255/1‑93 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCgg > 2:6748762/1‑93 (MQ=255)
aTTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATCCAGCTTGATAATCAATCGCCGGAaga > 1:9651048/1‑93 (MQ=255)
aTTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAaga > 1:7917344/1‑93 (MQ=255)
ttGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAagag > 1:9339304/1‑93 (MQ=255)
ttGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAagag > 1:1589611/1‑93 (MQ=255)
tGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAgaga < 1:3412269/93‑1 (MQ=255)
gCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAagagga > 2:9816884/1‑91 (MQ=255)
gCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaa > 1:2382623/1‑93 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaac > 2:2983223/1‑92 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaaa < 2:8832527/93‑1 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaaa < 2:4365211/93‑1 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaaa > 1:3802626/1‑93 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGaaa < 1:8329644/93‑1 (MQ=255)
cccTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAAc < 1:1386297/92‑1 (MQ=255)
aCCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAAc < 2:7615650/93‑1 (MQ=255)
ccTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACt > 2:6128742/1‑93 (MQ=255)
cTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTg > 2:5737196/1‑93 (MQ=255)
gAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGt < 2:5376856/93‑1 (MQ=255)
gAAACACAAGTGCGCCAGTCCGTTTGACAACGTCGACTGTTTGCTGCCGAGGG‑AAATCCAGCTTGATAATCAATCGCCGGAAGAGAAACTGGt < 1:6271572/93‑1 (MQ=255)
aaCACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATAGCCGGAAGAGAAACTGGTGa > 2:3389218/1‑93 (MQ=255)
acacAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGAt > 2:6292462/1‑93 (MQ=255)
acacAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGAt < 2:3727147/93‑1 (MQ=255)
cacaATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATa > 1:6829158/1‑93 (MQ=255)
caATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGc > 2:1898076/1‑93 (MQ=255)
caATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGc < 1:351783/93‑1 (MQ=255)
aTTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGccc < 1:5202610/93‑1 (MQ=255)
tGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCcgt < 1:1706697/93‑1 (MQ=255)
|
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGT > NC_000913/1532060‑1532239
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > NC_000913/1532059‑1532243
|
TCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCC < SRR4302540.8462552/94‑1 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.9759634/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.291366/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.2600054/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.4988764/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.5780864/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302540.9014594/1‑94 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT < SRR4302540.4210394/94‑1 (MQ=60)
GAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATT < SRR4302540.7037569/94‑1 (MQ=60)
GAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATT > SRR4302540.9753978/1‑94 (MQ=60)
GAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATT > SRR4302540.3854298/1‑94 (MQ=60)
AATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTC > SRR4302540.3180448/1‑94 (MQ=60)
AATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTC < SRR4302540.452846/94‑1 (MQ=60)
ATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCC < SRR4302540.7000168/94‑1 (MQ=60)
ATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCC < SRR4302540.948125/94‑1 (MQ=60)
ATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCC < SRR4302540.3493469/94‑1 (MQ=60)
TCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCG > SRR4302540.515084/1‑94 (MQ=60)
TCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCG < SRR4302540.2974662/94‑1 (MQ=60)
TCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCG < SRR4302540.8612374/94‑1 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT > SRR4302540.3761821/1‑94 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT > SRR4302540.1671216/1‑94 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT > SRR4302540.8390510/1‑94 (MQ=60)
CTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTT > SRR4302540.3725482/1‑94 (MQ=60)
CTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTT < SRR4302540.10157440/94‑1 (MQ=60)
TATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTG < SRR4302540.4138295/94‑1 (MQ=60)
TTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAA < SRR4302540.8469133/94‑1 (MQ=60)
TTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAA > SRR4302540.8836680/1‑94 (MQ=60)
TTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAA > SRR4302540.2896626/1‑94 (MQ=60)
TGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAC < SRR4302540.7182724/94‑1 (MQ=60)
TGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAC < SRR4302540.1367725/94‑1 (MQ=60)
TGCCCGCATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTGCGTGCATTGCACCTGAAACACAATTGCGCCAGTCCGTTTGAAAAC > SRR4302540.9082477/1‑94 (MQ=60)
GCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACC < SRR4302540.429680/94‑1 (MQ=60)
GCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACC > SRR4302540.6442793/1‑94 (MQ=60)
GCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACC < SRR4302540.7130502/94‑1 (MQ=60)
CCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCT < SRR4302540.1595534/94‑1 (MQ=60)
CCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTC > SRR4302540.3580829/1‑94 (MQ=60)
CCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTC < SRR4302540.294310/94‑1 (MQ=60)
CCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTC < SRR4302540.171115/94‑1 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG < SRR4302540.7547127/94‑1 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302540.48991/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302540.4967607/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA < SRR4302540.3482514/94‑1 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302540.5207512/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302540.562040/1‑94 (MQ=60)
ATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACG < SRR4302540.2998199/94‑1 (MQ=60)
TAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTT > SRR4302540.1459892/1‑94 (MQ=60)
TAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTT < SRR4302540.7536802/94‑1 (MQ=60)
AACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTT < SRR4302540.3120601/94‑1 (MQ=60)
AACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTT > SRR4302540.4490025/1‑94 (MQ=60)
AACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTT > SRR4302540.685512/1‑94 (MQ=60)
AACTGGTCGGGAGCTGCTGCGGTCAATAGTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTT < SRR4302540.7104552/94‑1 (MQ=60)
ACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTT > SRR4302540.4728033/1‑94 (MQ=60)
CTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTG > SRR4302540.1981946/1‑94 (MQ=60)
cggtccggcgccGCTGCGGTCAAAATTGGTGCGCTTCGTTCATGTCACCTGGAACACAATTGCGCCATTCCGTTTGAAAACCTCGACATTTTGC < SRR4302540.8615429/82‑1 (MQ=32)
TGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCCTTCCGTTTGAAAACCTCGACGTTTTGC > SRR4302540.151121/1‑94 (MQ=60)
GGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCT < SRR4302540.5871373/94‑1 (MQ=60)
GGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCT > SRR4302540.4476274/1‑94 (MQ=60)
GGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCT < SRR4302540.696379/94‑1 (MQ=60)
GTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTG < SRR4302540.748257/94‑1 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC < SRR4302540.9029498/94‑1 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC < SRR4302540.9029499/94‑1 (MQ=60)
GGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCG < SRR4302540.1459665/94‑1 (MQ=60)
GAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAG > SRR4302540.2010911/1‑94 (MQ=60)
GAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAG < SRR4302540.8112832/94‑1 (MQ=60)
GAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAG < SRR4302540.6805534/94‑1 (MQ=60)
AGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGG < SRR4302540.9939224/94‑1 (MQ=60)
GCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG < SRR4302540.4834380/94‑1 (MQ=60)
GCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG < SRR4302540.9713997/94‑1 (MQ=60)
TGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AA < SRR4302540.4459229/94‑1 (MQ=60)
TGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AA > SRR4302540.2037081/1‑94 (MQ=60)
TGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AA > SRR4302540.2081338/1‑94 (MQ=60)
TGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AA > SRR4302540.7856092/1‑94 (MQ=60)
GCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAA > SRR4302540.2425798/1‑94 (MQ=60)
TGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATA > SRR4302540.9322942/1‑94 (MQ=60)
TGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATA > SRR4302540.6660683/1‑94 (MQ=60)
TGCGGTCAATATTGATAAGCTTCGTGCCTTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATA > SRR4302540.6660684/1‑94 (MQ=60)
CGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACA < SRR4302540.7546097/94‑1 (MQ=60)
GTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGC > SRR4302540.6614829/1‑94 (MQ=60)
GTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGC < SRR4302540.5600756/94‑1 (MQ=60)
GTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTACGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGC < SRR4302540.7969029/94‑1 (MQ=60)
TCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCT < SRR4302540.1983907/94‑1 (MQ=60)
AATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTG < SRR4302540.6001425/94‑1 (MQ=60)
TATTGATAGGCTTCGTGCATGGCACCTGTAACACAATTGCGCCATTCCGTGTGAAAGCCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGAT < SRR4302540.6513718/94‑1 (MQ=60)
TATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGAT < SRR4302540.1755509/94‑1 (MQ=60)
TATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGAT < SRR4302540.6513719/94‑1 (MQ=60)
ATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATA < SRR4302540.7061924/94‑1 (MQ=60)
ATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATA < SRR4302540.7061800/94‑1 (MQ=60)
TTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAA < SRR4302540.10003609/94‑1 (MQ=60)
TTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAA < SRR4302540.2088529/94‑1 (MQ=60)
TGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAAT > SRR4302540.9312582/1‑94 (MQ=60)
GATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATC < SRR4302540.6470284/94‑1 (MQ=60)
GATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATC < SRR4302540.5084043/94‑1 (MQ=60)
TACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAA > SRR4302540.6425609/1‑94 (MQ=60)
TACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAA < SRR4302540.7581077/94‑1 (MQ=60)
ACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAAT < SRR4302540.6782789/94‑1 (MQ=60)
ACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAAT < SRR4302540.3052335/94‑1 (MQ=60)
CGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATC < SRR4302540.8636724/94‑1 (MQ=60)
CGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATC < SRR4302540.7146090/94‑1 (MQ=60)
GCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAAATACAGCTTGATAATCAATC > SRR4302540.3334886/1‑94 (MQ=60)
GCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCG > SRR4302540.180172/1‑94 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGC < SRR4302540.6388503/94‑1 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGC < SRR4302540.5028266/94‑1 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGC > SRR4302540.2000223/1‑94 (MQ=60)
TTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCC > SRR4302540.433636/1‑94 (MQ=60)
TTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCC < SRR4302540.5587942/94‑1 (MQ=60)
CGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGG > SRR4302540.5803224/1‑94 (MQ=60)
CGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGG > SRR4302540.7931861/1‑94 (MQ=60)
CGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGG < SRR4302540.7650447/94‑1 (MQ=60)
GTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGA > SRR4302540.2151254/1‑94 (MQ=60)
GTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGA < SRR4302540.963932/94‑1 (MQ=60)
TGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAG > SRR4302540.3410387/1‑94 (MQ=60)
TGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAA < SRR4302540.5909846/94‑1 (MQ=60)
TGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAA > SRR4302540.6975689/1‑94 (MQ=60)
GCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAG < SRR4302540.2582315/94‑1 (MQ=60)
CATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATCCAGCTTGATAATCAATCGCCGGAAGA > SRR4302540.9764688/1‑94 (MQ=60)
CATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGA > SRR4302540.9764689/1‑94 (MQ=60)
CATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGA > SRR4302540.8009637/1‑94 (MQ=60)
ATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AACTACAGCTTGATAATCAATCGCCGGAAGAG > SRR4302540.1606969/1‑94 (MQ=60)
ATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAG < SRR4302540.3652624/94‑1 (MQ=60)
ATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAG > SRR4302540.1606970/1‑94 (MQ=60)
ATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAG > SRR4302540.9450612/1‑94 (MQ=60)
TGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAA < SRR4302540.3449428/94‑1 (MQ=60)
TGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAA > SRR4302540.2408295/1‑94 (MQ=60)
TGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAA < SRR4302540.3449426/94‑1 (MQ=60)
GCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAA > SRR4302540.7572298/1‑94 (MQ=60)
GCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAA > SRR4302540.3844048/1‑94 (MQ=60)
GCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAA < SRR4302540.9009582/94‑1 (MQ=60)
GCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAA < SRR4302540.7481652/94‑1 (MQ=60)
GCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAA > SRR4302540.3844049/1‑94 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGCCGTTTTGCTGCCGAGGG‑ATATACAGCTTGATAATCAATCGCCGGATGATAAAC > SRR4302540.8437927/1‑94 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAAC < SRR4302540.687981/94‑1 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAAC < SRR4302540.8426324/94‑1 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAAC < SRR4302540.8900303/94‑1 (MQ=60)
CCCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACT < SRR4302540.1401117/94‑1 (MQ=60)
GAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTG < SRR4302540.6341351/94‑1 (MQ=60)
GAAACACAAGTGCGCCAGTCCGTTTGACAACGTCGACTGTTTGCTGCCGAGGG‑AAATCCAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTG < SRR4302540.6341352/94‑1 (MQ=60)
AAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGA < SRR4302540.413593/94‑1 (MQ=60)
AAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGA > SRR4302540.2606138/1‑94 (MQ=60)
AAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGA < SRR4302540.174261/94‑1 (MQ=60)
ACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATA > SRR4302540.6904772/1‑94 (MQ=60)
ACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATA < SRR4302540.6137872/94‑1 (MQ=60)
CAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCC < SRR4302540.355391/94‑1 (MQ=60)
CAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCC < SRR4302540.7486023/94‑1 (MQ=60)
AATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCC < SRR4302540.3304025/94‑1 (MQ=60)
ATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCG < SRR4302540.5738442/94‑1 (MQ=60)
ATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCG < SRR4302540.5259270/94‑1 (MQ=60)
TGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTC > SRR4302540.2338435/1‑94 (MQ=60)
TGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTC < SRR4302540.1725144/94‑1 (MQ=60)
TGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTC > SRR4302540.417692/1‑94 (MQ=60)
TGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTC < SRR4302540.8625893/94‑1 (MQ=60)
GCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCG < SRR4302540.5697226/94‑1 (MQ=60)
GCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCG > SRR4302540.7971549/1‑94 (MQ=60)
CGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGT > SRR4302540.1024538/1‑94 (MQ=60)
GCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > SRR4302540.7852503/1‑94 (MQ=60)
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TCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGG‑AAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > NC_000913/1532059‑1532243
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
