Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,532,150 |
A→G |
T35A (ACC→GCC) |
b1463 → |
putative N‑hydroxyarylamine O‑acetyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,532,150 | 0 | A | G | 100.0%
| 593.7
/ NA
| 184 | T35A (ACC→GCC) | b1463 | putative N‑hydroxyarylamine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (94/90); total (94/90) |
Only 100 of 191 total aligned reads displayed.
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCG > NC_000913/1532060‑1532238
|
tGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCa > 1:3112358/1‑93 (MQ=255)
tGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCa < 2:3637435/93‑1 (MQ=255)
aTCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTc > 1:3426544/1‑93 (MQ=255)
aTCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTc < 2:2274717/93‑1 (MQ=255)
tCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTcc > 2:5810012/1‑93 (MQ=255)
tCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTcc < 2:449099/93‑1 (MQ=255)
cACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCg > 1:3725196/1‑93 (MQ=255)
aCTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGt > 1:6045320/1‑93 (MQ=255)
aCTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGt < 2:5135114/93‑1 (MQ=255)
tATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGttt > 1:577229/1‑93 (MQ=255)
tATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGttt > 1:3047792/1‑93 (MQ=255)
aTTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTg < 1:465183/93‑1 (MQ=255)
tttGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGaa < 1:551297/93‑1 (MQ=255)
ttGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGaaa < 1:1943869/93‑1 (MQ=255)
tGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGaaaa < 1:1752795/93‑1 (MQ=255)
gCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAc > 1:1971294/1‑93 (MQ=255)
cccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAcc < 2:128389/93‑1 (MQ=255)
cccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAcc > 1:1265068/1‑93 (MQ=255)
ccGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCt < 1:6257625/93‑1 (MQ=255)
cGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTc < 1:4813713/93‑1 (MQ=255)
gTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCg < 2:24625/93‑1 (MQ=255)
gTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCg > 1:3662707/1‑93 (MQ=255)
gTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCg < 1:2965585/93‑1 (MQ=255)
gTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCg > 1:2799804/1‑93 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa < 1:542845/93‑1 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa > 1:1119822/1‑93 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa < 1:3196547/93‑1 (MQ=255)
tATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGa > 1:2215425/1‑93 (MQ=255)
aTTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAc < 2:5187581/93‑1 (MQ=255)
ttAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAACTCGACg > 2:1719121/1‑93 (MQ=255)
tAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGt < 2:5893783/93‑1 (MQ=255)
aCTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGttt < 2:1051629/93‑1 (MQ=255)
aCTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGttt < 2:3990177/93‑1 (MQ=255)
cTGGTCGGGAGCTGCTGCGGTCCATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGtttt > 1:5459253/1‑93 (MQ=255)
tGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtg > 2:4259491/1‑93 (MQ=255)
tGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtg < 1:4313888/93‑1 (MQ=255)
ggTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgc < 1:5857339/93‑1 (MQ=255)
ggTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgc < 2:3443612/93‑1 (MQ=255)
gTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgct < 1:2900352/93‑1 (MQ=255)
gTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTtgct > 1:1033566/1‑93 (MQ=255)
gggAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGcc > 2:6248795/1‑93 (MQ=255)
gggAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGcc > 1:5920454/1‑93 (MQ=255)
gAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCgg > 1:1576413/1‑92 (MQ=255)
gAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGa < 2:2834717/93‑1 (MQ=255)
aGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAg < 2:1587538/93‑1 (MQ=255)
aGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAg > 1:3582005/1‑93 (MQ=255)
ctgctgCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAggg > 2:2551093/1‑93 (MQ=255)
tgctgcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGa > 2:4409698/1‑93 (MQ=255)
tgctgcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGa > 2:1327644/1‑93 (MQ=255)
gctgcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGaa > 2:2925138/1‑93 (MQ=255)
tgcGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAAt < 1:5008349/93‑1 (MQ=255)
cGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATAc < 2:223696/93‑1 (MQ=255)
cGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATAc < 1:1633373/93‑1 (MQ=255)
cGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATAc > 1:3284394/1‑93 (MQ=255)
ggTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACa < 2:1002301/93‑1 (MQ=255)
ggTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACa < 1:1499939/93‑1 (MQ=255)
ggTCAATATTGAGACGCTTCGTGCATTGCACCTGAAACGCAATTGCGCCATTCCGTTTGAAAGCCTCGACGTTTTGCTGCCGAGGGAAATACa < 1:334437/93‑1 (MQ=255)
gTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAg > 1:50267/1‑93 (MQ=255)
cAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCt > 1:3961025/1‑93 (MQ=255)
atatTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTg > 1:5275652/1‑93 (MQ=255)
atTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGAt < 2:2959179/93‑1 (MQ=255)
atTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGAt > 1:2676880/1‑93 (MQ=255)
gagaCGCTTCGTGCATTGCACCTGAAACACAANTGNGCNATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATant < 2:5614279/90‑1 (MQ=255)
tACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatca < 2:4816501/93‑1 (MQ=255)
aCGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatcaa < 2:4690167/93‑1 (MQ=255)
aCGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatcaa < 1:1179445/93‑1 (MQ=255)
aCGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatcaa > 2:3221266/1‑93 (MQ=255)
cGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatcaat > 1:428634/1‑93 (MQ=255)
gCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATaatcaatc < 2:3028561/93‑1 (MQ=255)
cTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCg > 2:686974/1‑93 (MQ=255)
ttCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGc > 2:5729022/1‑93 (MQ=255)
ttCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGGTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGc > 1:4407103/1‑93 (MQ=255)
ctCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGc < 1:4532057/92‑1 (MQ=255)
cGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCg > 2:2327803/1‑93 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCgg > 1:3931126/1‑93 (MQ=255)
gTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAACTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCgg > 2:6038101/1‑93 (MQ=255)
tGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGa > 1:1996133/1‑93 (MQ=255)
gCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGaa < 2:2817331/93‑1 (MQ=255)
aTTGCACCTGAAACACAATTGCGCCGTTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAaga < 1:6089366/93‑1 (MQ=255)
aTTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAaga < 2:2668747/93‑1 (MQ=255)
aTTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAaga < 2:5397318/93‑1 (MQ=255)
tGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAgaga < 1:1376847/93‑1 (MQ=255)
tGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAgaga < 2:4572951/93‑1 (MQ=255)
gCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGaa > 2:4957784/1‑93 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGaaa < 1:140578/93‑1 (MQ=255)
cACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGaaa < 1:490089/93‑1 (MQ=255)
aCCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAAc < 2:2032767/93‑1 (MQ=255)
aCCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAAc < 1:862841/93‑1 (MQ=255)
ccTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACt < 2:5505691/93‑1 (MQ=255)
ccTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACt > 1:745450/1‑93 (MQ=255)
cTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTg < 2:1228181/93‑1 (MQ=255)
tGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTgg > 2:2363675/1‑93 (MQ=255)
gAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGt < 1:2451302/93‑1 (MQ=255)
aaCACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGa < 1:3113398/93‑1 (MQ=255)
cacaATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATa < 2:383507/93‑1 (MQ=255)
cacaATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATa > 1:2727022/1‑93 (MQ=255)
caATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGc > 1:5959194/1‑93 (MQ=255)
aaTGGCTCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGcc < 2:839497/93‑1 (MQ=255)
aTTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGccc > 2:1201447/1‑93 (MQ=255)
ttGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCcg > 1:2371642/1‑93 (MQ=255)
|
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCG > NC_000913/1532060‑1532238
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > NC_000913/1532057‑1532243
|
ATTCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCG < SRR4302533.3714716/94‑1 (MQ=60)
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCA > SRR4302533.3131495/1‑94 (MQ=60)
CTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCA < SRR4302533.4263321/94‑1 (MQ=60)
TGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCAT > SRR4302533.1310297/1‑94 (MQ=60)
GAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGATCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATT > SRR4302533.4467191/1‑94 (MQ=60)
AATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTC > SRR4302533.3447712/1‑94 (MQ=60)
ATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCC < SRR4302533.491071/94‑1 (MQ=60)
TCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCG > SRR4302533.3748049/1‑94 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT < SRR4302533.6137061/94‑1 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT < SRR4302533.1530925/94‑1 (MQ=60)
CACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGT > SRR4302533.6081942/1‑94 (MQ=60)
CTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTT > SRR4302533.3066451/1‑94 (MQ=60)
CTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTT > SRR4302533.580633/1‑94 (MQ=60)
ATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGA < SRR4302533.467959/94‑1 (MQ=60)
TTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAA < SRR4302533.554565/94‑1 (MQ=60)
TTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAA < SRR4302533.1955726/94‑1 (MQ=60)
TGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAC > SRR4302533.1983356/1‑94 (MQ=60)
TGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAC > SRR4302533.5485251/1‑94 (MQ=60)
TGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAAC < SRR4302533.1763473/94‑1 (MQ=60)
GCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACC > SRR4302533.1272636/1‑94 (MQ=60)
CCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTC < SRR4302533.6295047/94‑1 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG > SRR4302533.523829/1‑94 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG > SRR4302533.3957775/1‑94 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG > SRR4302533.2817023/1‑94 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG > SRR4302533.3685223/1‑94 (MQ=60)
CGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCG < SRR4302533.4842887/94‑1 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302533.2946201/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA < SRR4302533.2983710/94‑1 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302533.1126466/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302533.2229100/1‑94 (MQ=60)
GTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGA > SRR4302533.5042341/1‑94 (MQ=60)
TATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAC > SRR4302533.3267722/1‑94 (MQ=60)
TATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAC < SRR4302533.3216218/94‑1 (MQ=60)
TATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAC < SRR4302533.3144802/94‑1 (MQ=60)
TATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGAC < SRR4302533.546068/94‑1 (MQ=60)
TAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTT > SRR4302533.2600886/1‑94 (MQ=60)
ACTGGTCGGGAGCTGCTGCGGTCCATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTT > SRR4302533.5492144/1‑94 (MQ=60)
ACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTT < SRR4302533.558516/94‑1 (MQ=60)
ACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTT > SRR4302533.3361971/1‑94 (MQ=60)
TGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGC < SRR4302533.5921926/94‑1 (MQ=60)
TGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGC < SRR4302533.4339858/94‑1 (MQ=60)
GGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCT < SRR4302533.5892748/94‑1 (MQ=60)
GGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCT > SRR4302533.1039646/1‑94 (MQ=60)
GTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTG < SRR4302533.2918171/94‑1 (MQ=60)
CGGGATCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC < SRR4302533.3685730/94‑1 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC > SRR4302533.5956239/1‑94 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC > SRR4302533.3438944/1‑94 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC > SRR4302533.893904/1‑94 (MQ=60)
CGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCC > SRR4302533.5316851/1‑94 (MQ=60)
GGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGG > SRR4302533.1585903/1‑94 (MQ=60)
GGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGA > SRR4302533.375110/1‑94 (MQ=60)
GAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAG > SRR4302533.3604069/1‑94 (MQ=60)
CTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGA < SRR4302533.2415085/94‑1 (MQ=60)
CTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGA > SRR4302533.786085/1‑94 (MQ=60)
CTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAAT > SRR4302533.1686171/1‑94 (MQ=60)
TGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATA < SRR4302533.5038696/94‑1 (MQ=60)
GCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATAC > SRR4302533.3304667/1‑94 (MQ=60)
CGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACA > SRR4302533.2340989/1‑94 (MQ=60)
CGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACA < SRR4302533.1643265/94‑1 (MQ=60)
CGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACA > SRR4302533.1190067/1‑94 (MQ=60)
GGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAG > SRR4302533.2803470/1‑94 (MQ=60)
GGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAG < SRR4302533.1508982/94‑1 (MQ=60)
GGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAG > SRR4302533.2734277/1‑94 (MQ=60)
GGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAG > SRR4302533.50612/1‑94 (MQ=60)
GGTCAATATTGAGACGCTTCGTGCATTGCACCTGAAACGCAATTGCGCCATTCCGTTTGAAAGCCTCGACGTTTTGCTGCCGAGGGAAATACAG < SRR4302533.336481/94‑1 (MQ=60)
TCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCT > SRR4302533.3985158/1‑94 (MQ=60)
AATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTG > SRR4302533.5307283/1‑94 (MQ=60)
TATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGAT > SRR4302533.2693292/1‑94 (MQ=60)
TATTGATACGCTTCGTGCATTGCACCGGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCAGCCGAGGGAAATACAGCTTGAT < SRR4302533.3557987/94‑1 (MQ=60)
ATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATA > SRR4302533.2902939/1‑94 (MQ=60)
TTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAA > SRR4302533.3651511/1‑94 (MQ=60)
TGATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAAT < SRR4302533.1437635/94‑1 (MQ=60)
GATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATC < SRR4302533.5986048/94‑1 (MQ=60)
ATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCA < SRR4302533.6028188/94‑1 (MQ=60)
ATACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCA < SRR4302533.3038327/94‑1 (MQ=60)
ACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAAT < SRR4302533.1186530/94‑1 (MQ=60)
ACGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAAT > SRR4302533.431190/1‑94 (MQ=60)
CGCTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATC < SRR4302533.1959835/94‑1 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGC > SRR4302533.1596968/1‑94 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGC > SRR4302533.6106661/1‑94 (MQ=60)
CTTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGGTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGC > SRR4302533.4433716/1‑94 (MQ=60)
CTCGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCC < SRR4302533.4559498/94‑1 (MQ=60)
CGTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGG > SRR4302533.3955125/1‑94 (MQ=60)
GTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGA > SRR4302533.2008397/1‑94 (MQ=60)
GTGCATTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGAAAATAaaccttgttatccaaccgccgga > SRR4302533.3107426/1‑71 (MQ=60)
ATTGCACCTGAAACACAATTGCGCCGTTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAG < SRR4302533.6126175/94‑1 (MQ=60)
TTGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGA > SRR4302533.1398814/1‑94 (MQ=60)
TGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAA < SRR4302533.1385131/94‑1 (MQ=60)
TGCACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAA < SRR4302533.474530/94‑1 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAAC < SRR4302533.493019/94‑1 (MQ=60)
CACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAAC < SRR4302533.141474/94‑1 (MQ=60)
ACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACT > SRR4302533.749835/1‑94 (MQ=60)
ACCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACT < SRR4302533.867898/94‑1 (MQ=60)
CCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTG < SRR4302533.1143686/94‑1 (MQ=60)
CCTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTG < SRR4302533.4344294/94‑1 (MQ=60)
CTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGG > SRR4302533.5036445/1‑94 (MQ=60)
CTGAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGG > SRR4302533.2145609/1‑94 (MQ=60)
GAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTG < SRR4302533.5815720/94‑1 (MQ=60)
GAAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTG < SRR4302533.2466435/94‑1 (MQ=60)
AAACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGA > SRR4302533.6322868/1‑94 (MQ=60)
AACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGAT < SRR4302533.3132545/94‑1 (MQ=60)
ACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATA < SRR4302533.4618173/94‑1 (MQ=60)
ACACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATA > SRR4302533.2743750/1‑94 (MQ=60)
ACAATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGC > SRR4302533.5995241/1‑94 (MQ=60)
AATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCC > SRR4302533.1810805/1‑94 (MQ=60)
ATTGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCG > SRR4302533.2386316/1‑94 (MQ=60)
TGCGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTC > SRR4302533.5936620/1‑94 (MQ=60)
GCGCCATTCTGTTTGAAACCCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCG < SRR4302533.1975780/94‑1 (MQ=60)
CGCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGT > SRR4302533.1248546/1‑94 (MQ=60)
GCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG < SRR4302533.4964027/94‑1 (MQ=60)
GCCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > SRR4302533.5519286/1‑94 (MQ=60)
|
ATTCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTG > NC_000913/1532057‑1532243
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
