Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,570,594	G→A	A878V (GCG→GTG)	pqqL ←	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,570,594	0	G	A	99.5%	1358.3 / ‑5.9	375	A878V (GCG→GTG)	pqqL	putative peptidase
Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (210/162); total (211/164)
Fisher's exact test for biased strand distribution p-value = 1.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01

Only 100 of 379 total aligned reads displayed.

TTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTA  >  NC_000913/1570504‑1570683

ttCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACt                                                                                         >  2:7734635/1‑93 (MQ=255)

 tctcTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTa                                                                                        >  2:8271026/1‑93 (MQ=255)

 tctcTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTa                                                                                        >  2:7144617/1‑93 (MQ=255)

  ctctACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTaa                                                                                       <  2:6769136/93‑1 (MQ=255)

  ctctACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTaa                                                                                       <  2:1986172/93‑1 (MQ=255)

   tctACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAt                                                                                      >  1:1303377/1‑93 (MQ=255)

    ctACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAtt                                                                                     <  2:653662/93‑1 (MQ=255)

      aCCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAttgt                                                                                   <  2:6933627/93‑1 (MQ=255)

       ccGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAttgtt                                                                                  <  2:9067757/93‑1 (MQ=255)

       ccGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAttgtt                                                                                  >  1:7779658/1‑93 (MQ=255)

        cGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAttgttg                                                                                 <  1:5033616/93‑1 (MQ=255)

        cGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAttgttg                                                                                 >  2:1075171/1‑93 (MQ=255)

         gTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGa                                                                                >  1:1072371/1‑93 (MQ=255)

         gTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGa                                                                                <  1:6726956/93‑1 (MQ=255)

          tCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGaa                                                                               >  2:3281456/1‑93 (MQ=255)

          tCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGaa                                                                               >  2:5699722/1‑93 (MQ=255)

          tCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGaa                                                                               >  2:4717718/1‑93 (MQ=255)

           cATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAac                                                                              >  1:4890716/1‑93 (MQ=255)

            aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacg                                                                             >  2:4057294/1‑93 (MQ=255)

            aTTTGTTTCAACAATTGATCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCCCTAATTGTTGaaag                                                                             >  1:7447439/1‑91 (MQ=255)

              ttGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACACTAGAGTTCACTAATTGTTGAacgct                                                                           >  1:8686757/1‑93 (MQ=255)

              ttGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgct                                                                           <  1:1149459/93‑1 (MQ=255)

               tGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgcta                                                                          >  1:761160/1‑93 (MQ=255)

                  ttCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgctacgc                                                                       <  2:8728595/93‑1 (MQ=255)

                   tCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgctacgct                                                                      >  2:4344220/1‑93 (MQ=255)

                   tCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgctacgct                                                                      >  1:678654/1‑93 (MQ=255)

                   tCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAacgctacgct                                                                      >  2:6679169/1‑93 (MQ=255)

                    caacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCAATAATTGTTGAACGCTACGCTg                                                                     >  1:3011662/1‑93 (MQ=255)

                     aacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGt                                                                    <  2:5046417/93‑1 (MQ=255)

                     aacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGt                                                                    >  1:9775018/1‑93 (MQ=255)

                     aacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGt                                                                    >  2:8444164/1‑93 (MQ=255)

                      acaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGtt                                                                   >  1:9332124/1‑93 (MQ=255)

                       caaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTg                                                                  <  2:6492530/93‑1 (MQ=255)

                          ttGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGat                                                               >  2:3740216/1‑93 (MQ=255)

                           tGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGata                                                              <  1:3177180/93‑1 (MQ=255)

                           tGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGata                                                              <  2:2229435/93‑1 (MQ=255)

                            gCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGatat                                                             <  1:417496/93‑1 (MQ=255)

                             cTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATc                                                            <  1:6144530/93‑1 (MQ=255)

                              tCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCg                                                           >  2:586936/1‑93 (MQ=255)

                               ccTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGa                                                          <  2:4614216/93‑1 (MQ=255)

                               ccTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGa                                                          <  2:1555960/93‑1 (MQ=255)

                               ccTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGa                                                          >  2:5251558/1‑93 (MQ=255)

                               ccTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGa                                                          >  1:3381837/1‑93 (MQ=255)

                               ccTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGa                                                          <  1:7954379/93‑1 (MQ=255)

                                cTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAg                                                         >  2:9493085/1‑93 (MQ=255)

                                cTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAg                                                         >  2:7666251/1‑93 (MQ=255)

                                 tGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAgg                                                        <  2:3954805/93‑1 (MQ=255)

                                 tGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAgg                                                        >  2:8541169/1‑93 (MQ=255)

                                  gCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGc                                                       >  1:3573628/1‑93 (MQ=255)

                                  gCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGc                                                       <  2:2964409/93‑1 (MQ=255)

                                   cTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCt                                                      >  2:9685351/1‑93 (MQ=255)

                                   cTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCt                                                      >  1:621361/1‑93 (MQ=255)

                                    tCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTg                                                     >  2:6125467/1‑93 (MQ=255)

                                    tCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTg                                                     >  1:8290067/1‑93 (MQ=255)

                                    tCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTg                                                     <  2:4278251/93‑1 (MQ=255)

                                      aGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTgcg                                                   >  1:5891060/1‑93 (MQ=255)

                                       gTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTgcgc                                                  >  2:7433363/1‑93 (MQ=255)

                                         ccATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTg                                                >  1:7016215/1‑93 (MQ=255)

                                            tgctgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAc                                             >  1:2753620/1‑93 (MQ=255)

                                            tgctgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAc                                             >  1:1498019/1‑93 (MQ=255)

                                              ctgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGt                                           <  1:8980528/93‑1 (MQ=255)

                                               tgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACggt                                          >  1:7144959/1‑91 (MQ=255)

                                               tgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGtt                                          >  1:5378855/1‑93 (MQ=255)

                                                gcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGctt                                         >  2:9439967/1‑93 (MQ=255)

                                                    gATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAGGTTTTGCt                                     >  1:2154844/1‑93 (MQ=255)

                                                     aTCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTg                                    <  2:3227989/93‑1 (MQ=255)

                                                      tCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTgg                                   >  2:1684476/1‑93 (MQ=255)

                                                         tCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTat                                >  1:9470658/1‑93 (MQ=255)

                                                            tatTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTattca                             >  2:1458085/1‑93 (MQ=255)

                                                             atTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTattcat                            >  1:4741821/1‑93 (MQ=255)

                                                               tGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTattcattc                          <  2:4908485/93‑1 (MQ=255)

                                                                gAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGTTGAACGTTTTGCTGGTattcattcg                         >  2:7959679/1‑92 (MQ=255)

                                                                 aaTAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAg                        >  1:6743911/1‑93 (MQ=255)

                                                                   tAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGtt                      <  2:1227138/93‑1 (MQ=255)

                                                                   tAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGtt                      >  1:3958042/1‑93 (MQ=255)

                                                                     aGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCt                    >  1:1656656/1‑93 (MQ=255)

                                                                     aGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCt                    <  2:4867869/93‑1 (MQ=255)

                                                                     aGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCt                    >  1:4415522/1‑93 (MQ=255)

                                                                     aGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCt                    <  2:2726335/93‑1 (MQ=255)

                                                                     aGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCt                    <  2:3029223/93‑1 (MQ=255)

                                                                      gACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCtt                   >  2:2338361/1‑93 (MQ=255)

                                                                      gACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCtt                   >  2:3465166/1‑93 (MQ=255)

                                                                       aCTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTg                  <  1:3725996/93‑1 (MQ=255)

                                                                        cTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGc                 <  1:1818810/93‑1 (MQ=255)

                                                                         tATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCt                >  1:3849612/1‑93 (MQ=255)

                                                                         tATTTACAATAGTGTTCACTAAGTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACATCTTGCTGTTGTTCACTCAGCTCTTGcg                >  1:8871680/1‑92 (MQ=255)

                                                                           tttACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCa              >  1:8049526/1‑93 (MQ=255)

                                                                           tttACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCa              >  2:9880845/1‑93 (MQ=255)

                                                                            ttACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCAc             >  2:2759298/1‑93 (MQ=255)

                                                                             tACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTCTCTCACt            >  1:6641756/1‑93 (MQ=255)

                                                                                aaTAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAt         <  1:4067616/93‑1 (MQ=255)

                                                                                aaTAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAt         <  2:2107953/93‑1 (MQ=255)

                                                                                aaTAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAt         >  2:9219670/1‑93 (MQ=255)

                                                                                aaTAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAt         <  1:9880815/93‑1 (MQ=255)

                                                                                  tAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATcc       >  1:24485/1‑93 (MQ=255)

                                                                                    gtgtTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCt     <  2:9504982/93‑1 (MQ=255)

                                                                                    gtgtTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCt     <  2:4558468/93‑1 (MQ=255)

                                                                                      gtTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCttt   <  1:9615800/93‑1 (MQ=255)

                                                                                      gtTCACAAATTGATGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGCAAGTTTTGCTGGTATTCATTCAGTTCTAGCACACTGATCACttt   <  2:8943460/93‑1 (MQ=255)

                                                                                       ttCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTa  >  1:8547548/1‑93 (MQ=255)

TTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTA  >  NC_000913/1570504‑1570683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  NC_000913/1570501‑1570687

ACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCA                                                                                               <  SRR4302540.2976435/94‑1 (MQ=60)

ACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCA                                                                                               >  SRR4302540.470214/1‑94 (MQ=60)

ACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCA                                                                                               <  SRR4302540.5067561/94‑1 (MQ=60)

 CATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCAC                                                                                              >  SRR4302540.1152002/1‑94 (MQ=60)

 CATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCAC                                                                                              <  SRR4302540.5097517/94‑1 (MQ=60)

  ATTCTCTACCGTCATTTTTTTCAACAAGTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACT                                                                                             <  SRR4302540.4113350/94‑1 (MQ=60)

  ATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACT                                                                                             <  SRR4302540.4113351/94‑1 (MQ=60)

   TTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTA                                                                                            >  SRR4302540.4998803/1‑94 (MQ=60)

     CTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAT                                                                                          >  SRR4302540.4462150/1‑94 (MQ=60)

     CTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAAT                                                                                          >  SRR4302540.1316900/1‑94 (MQ=60)

      TCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATT                                                                                         <  SRR4302540.1302332/94‑1 (MQ=60)

      TCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATT                                                                                         <  SRR4302540.6814651/94‑1 (MQ=60)

        TACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGT                                                                                       <  SRR4302540.2559160/94‑1 (MQ=60)

         ACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTT                                                                                      >  SRR4302540.7870598/1‑94 (MQ=60)

          CCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTG                                                                                     <  SRR4302540.10061245/94‑1 (MQ=60)

          CCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTG                                                                                     <  SRR4302540.3063383/94‑1 (MQ=60)

          CCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTG                                                                                     >  SRR4302540.8906967/1‑94 (MQ=60)

           CGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGA                                                                                    <  SRR4302540.5088077/94‑1 (MQ=60)

           CGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGA                                                                                    >  SRR4302540.1083315/1‑94 (MQ=60)

           CGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGA                                                                                    >  SRR4302540.7651057/1‑94 (MQ=60)

            GTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAA                                                                                   >  SRR4302540.2137137/1‑94 (MQ=60)

            GTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAA                                                                                   <  SRR4302540.3971428/94‑1 (MQ=60)

            GTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAA                                                                                   <  SRR4302540.6801214/94‑1 (MQ=60)

            GTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAA                                                                                   >  SRR4302540.5036019/1‑94 (MQ=60)

            GTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAA                                                                                   <  SRR4302540.6801220/94‑1 (MQ=60)

             TCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAAC                                                                                  >  SRR4302540.4943304/1‑94 (MQ=60)

             TCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAAC                                                                                  <  SRR4302540.3713822/94‑1 (MQ=60)

             TCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAAC                                                                                  <  SRR4302540.363657/94‑1 (MQ=60)

             TCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAAC                                                                                  <  SRR4302540.3180184/94‑1 (MQ=60)

             TCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAAC                                                                                  >  SRR4302540.9557677/1‑94 (MQ=60)

              CATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACG                                                                                 <  SRR4302540.8670926/94‑1 (MQ=60)

              CATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACG                                                                                 >  SRR4302540.1365380/1‑94 (MQ=60)

              CATTTGTTTCAACAATTGATCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCCCTAATTGTTGAAAG                                                                                 >  SRR4302540.7530430/1‑94 (MQ=60)

               ATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGC                                                                                >  SRR4302540.1222174/1‑94 (MQ=60)

               ATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGC                                                                                >  SRR4302540.9974102/1‑94 (MQ=60)

               ATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGC                                                                                >  SRR4302540.2377941/1‑94 (MQ=60)

                TTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACACTAGAGTTCACTAATTGTTGAACGCT                                                                               >  SRR4302540.8787621/1‑94 (MQ=60)

                TTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCT                                                                               >  SRR4302540.8639010/1‑94 (MQ=60)

                 TTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTA                                                                              <  SRR4302540.1161444/94‑1 (MQ=60)

                 TTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTA                                                                              >  SRR4302540.40286/1‑94 (MQ=60)

                 TTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTA                                                                              >  SRR4302540.769259/1‑94 (MQ=60)

                  TGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTAC                                                                             >  SRR4302540.7209249/1‑94 (MQ=60)

                  TGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTAC                                                                             <  SRR4302540.8714141/94‑1 (MQ=60)

                   GTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACG                                                                            >  SRR4302540.6798829/1‑94 (MQ=60)

                     TTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCT                                                                          >  SRR4302540.685922/1‑94 (MQ=60)

                     TTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCT                                                                          >  SRR4302540.4914661/1‑94 (MQ=60)

                      TCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTG                                                                         >  SRR4302540.6238781/1‑94 (MQ=60)

                      TCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCAATAATTGTTGAACGCTACGCTG                                                                         >  SRR4302540.3044786/1‑94 (MQ=60)

                       CAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGT                                                                        >  SRR4302540.9889603/1‑94 (MQ=60)

                        AACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTT                                                                       >  SRR4302540.9443394/1‑94 (MQ=60)

                            ATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGAT                                                                   >  SRR4302540.3011545/1‑94 (MQ=60)

                              TGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATAT                                                                 <  SRR4302540.3211715/94‑1 (MQ=60)

                              TGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATAT                                                                 <  SRR4302540.9974305/94‑1 (MQ=60)

                               TCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATC                                                                <  SRR4302540.798302/94‑1 (MQ=60)

                               GCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATC                                                                <  SRR4302540.421879/94‑1 (MQ=60)

                               GCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATC                                                                <  SRR4302540.6984078/94‑1 (MQ=60)

                                CTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCG                                                               <  SRR4302540.3923379/94‑1 (MQ=60)

                                CTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCG                                                               <  SRR4302540.6212969/94‑1 (MQ=60)

                                 TCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGA                                                              >  SRR4302540.3418751/1‑94 (MQ=60)

                                 TCCTGCTCAGTCCATGCTGCAGGATCGTCATATCGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGA                                                              >  SRR4302540.4187167/1‑94 (MQ=60)

                                  CCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAG                                                             <  SRR4302540.8047095/94‑1 (MQ=60)

                                  CCTGCTCAGTCCATGCTGCAGGATCGTCATATTAAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAG                                                             <  SRR4302540.9789603/94‑1 (MQ=60)

                                  CCTGCTCAGTCCACGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAG                                                             <  SRR4302540.8400126/94‑1 (MQ=60)

                                   CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGG                                                            >  SRR4302540.3858601/1‑94 (MQ=60)

                                   CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGG                                                            <  SRR4302540.1263741/94‑1 (MQ=60)

                                   CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGG                                                            >  SRR4302540.6468980/1‑94 (MQ=60)

                                    TGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGC                                                           >  SRR4302540.3612660/1‑94 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCT                                                          <  SRR4302540.6790171/94‑1 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCT                                                          >  SRR4302540.627973/1‑94 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCT                                                          <  SRR4302540.5363591/94‑1 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCT                                                          <  SRR4302540.6790172/94‑1 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCT                                                          >  SRR4302540.964689/1‑94 (MQ=60)

                                     GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCG                                                          >  SRR4302540.8101822/1‑94 (MQ=60)

                                      CTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTG                                                         >  SRR4302540.8386336/1‑94 (MQ=60)

                                       TCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGC                                                        <  SRR4302540.6250376/94‑1 (MQ=60)

                                        CAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCG                                                       >  SRR4302540.4211045/1‑94 (MQ=60)

                                        CAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCG                                                       >  SRR4302540.5956140/1‑94 (MQ=60)

                                        CAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCG                                                       >  SRR4302540.9306947/1‑94 (MQ=60)

                                        CAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCG                                                       >  SRR4302540.3821573/1‑94 (MQ=60)

                                         AGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGC                                                      >  SRR4302540.9515804/1‑94 (MQ=60)

                                          GTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTAGGCTGTTGGATATCGAGGCTGCGCT                                                     >  SRR4302540.1096591/1‑94 (MQ=60)

                                          GTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCT                                                     <  SRR4302540.1896217/94‑1 (MQ=60)

                                          GTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCT                                                     >  SRR4302540.1096287/1‑94 (MQ=60)

                                           TCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTG                                                    >  SRR4302540.343709/1‑94 (MQ=60)

                                           TCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTG                                                    >  SRR4302540.7094122/1‑94 (MQ=60)

                                           TCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTG                                                    >  SRR4302540.4040045/1‑94 (MQ=60)

                                            CCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGA                                                   >  SRR4302540.721217/1‑94 (MQ=60)

                                              ATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAC                                                 >  SRR4302540.2783384/1‑94 (MQ=60)

                                              ATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAC                                                 >  SRR4302540.1514510/1‑94 (MQ=60)

                                               TGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACG                                                <  SRR4302540.8581111/94‑1 (MQ=60)

                                                 CTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTT                                              <  SRR4302540.9087548/94‑1 (MQ=60)

                                                 CTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTT                                              >  SRR4302540.5438007/1‑94 (MQ=60)

                                                 CTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGGT                                              >  SRR4302540.7224572/1‑94 (MQ=60)

                                                  TGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTT                                             <  SRR4302540.3440300/94‑1 (MQ=60)

                                                   GCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTT                                            <  SRR4302540.9994320/94‑1 (MQ=60)

                                                   GCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTT                                            <  SRR4302540.8218857/94‑1 (MQ=60)

                                                    CAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTG                                           >  SRR4302540.4585575/1‑94 (MQ=60)

                                                    CAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTG                                           >  SRR4302540.9645713/1‑94 (MQ=60)

                                                     AGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGC                                          >  SRR4302540.2984350/1‑94 (MQ=60)

                                                     AGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGC                                          >  SRR4302540.6974329/1‑94 (MQ=60)

                                                     AGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGC                                          >  SRR4302540.5192321/1‑94 (MQ=60)

                                                     AGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGC                                          <  SRR4302540.8305494/94‑1 (MQ=60)

                                                      GGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAAGGTTTTGCT                                         >  SRR4302540.2178033/1‑94 (MQ=60)

                                                      GGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCT                                         <  SRR4302540.7724484/94‑1 (MQ=60)

                                                       GATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTG                                        >  SRR4302540.167034/1‑94 (MQ=60)

                                                        ATCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGG                                       <  SRR4302540.6467081/94‑1 (MQ=60)

                                                         TCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGT                                      <  SRR4302540.7407297/94‑1 (MQ=60)

                                                         TCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGT                                      <  SRR4302540.7792974/94‑1 (MQ=60)

                                                         TCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGT                                      >  SRR4302540.265927/1‑94 (MQ=60)

                                                         TCGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGT                                      >  SRR4302540.4893272/1‑94 (MQ=60)

                                                          CGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTA                                     >  SRR4302540.795392/1‑94 (MQ=60)

                                                          CGTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTA                                     >  SRR4302540.1740846/1‑94 (MQ=60)

                                                           GTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTCCGCTGTTGTCTATCGAGGCTGCGCTGAACGTTTTGCTcgtct                                    >  SRR4302540.56925/1‑89 (MQ=60)

                                                           GTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTAT                                    >  SRR4302540.9582996/1‑94 (MQ=60)

                                                           GTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTAT                                    <  SRR4302540.8795354/94‑1 (MQ=60)

                                                           GTCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTAT                                    >  SRR4302540.56924/1‑94 (MQ=60)

                                                            TCATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATT                                   >  SRR4302540.1574166/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCT                                 >  SRR4302540.9303773/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCT                                 >  SRR4302540.9021570/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCA                                 >  SRR4302540.131905/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCA                                 >  SRR4302540.3386301/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCA                                 >  SRR4302540.6961696/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCA                                 >  SRR4302540.9021569/1‑94 (MQ=60)

                                                              ATATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCA                                 >  SRR4302540.9806279/1‑94 (MQ=60)

                                                              ATATTGAATAAGACCATTTACAATAGTGTTCACTAATTGTTGAACGCTCCGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCT                                 >  SRR4302540.9806277/1‑94 (MQ=60)

                                                               TATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCAT                                >  SRR4302540.4792428/1‑94 (MQ=60)

                                                               TATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCAT                                <  SRR4302540.8240438/94‑1 (MQ=60)

                                                                ATTGAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATT                               >  SRR4302540.7550162/1‑94 (MQ=60)

                                                                   GAATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAG                            >  SRR4302540.6818423/1‑94 (MQ=60)

                                                                    AATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGT                           >  SRR4302540.6230626/1‑94 (MQ=60)

                                                                    AATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGT                           <  SRR4302540.3294901/94‑1 (MQ=60)

                                                                    AATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGT                           <  SRR4302540.804257/94‑1 (MQ=60)

                                                                    AATAAGACTATTTACAATAGTGTTCACTAATTGTGGAACGCTACGCTGTTGGATATCGAGGCTGCTCTGAACGTTTTGCTGGTATTCATTCAGT                           <  SRR4302540.4774306/94‑1 (MQ=60)

                                                                     ATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTTATTCAGTT                          >  SRR4302540.7931144/1‑94 (MQ=60)

                                                                     ATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTT                          >  SRR4302540.5979232/1‑94 (MQ=60)

                                                                     ATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTT                          >  SRR4302540.4000740/1‑94 (MQ=60)

                                                                     ATAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTT                          >  SRR4302540.2002102/1‑94 (MQ=60)

                                                                      TAAGACTATTTACCATCGTGTTCCCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTC                         <  SRR4302540.9041271/94‑1 (MQ=60)

                                                                      TAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTC                         <  SRR4302540.4162599/94‑1 (MQ=60)

                                                                      TAAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTC                         <  SRR4302540.8904869/94‑1 (MQ=60)

                                                                       AAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCT                        >  SRR4302540.1674709/1‑94 (MQ=60)

                                                                       AAGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCT                        >  SRR4302540.4463374/1‑94 (MQ=60)

                                                                        AGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTT                       <  SRR4302540.2406934/94‑1 (MQ=60)

                                                                        AGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTT                       >  SRR4302540.7628721/1‑94 (MQ=60)

                                                                        AGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTT                       <  SRR4302540.5121511/94‑1 (MQ=60)

                                                                        AGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTT                       >  SRR4302540.3875090/1‑94 (MQ=60)

                                                                        AGACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGCTGGTTATCGAGGCTGCGCTGCACGTTTTGCTGCTATTCATTCAGTTCTT                       >  SRR4302540.3875089/1‑94 (MQ=60)

                                                                          ACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGC                     <  SRR4302540.3349660/94‑1 (MQ=60)

                                                                          ACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGC                     <  SRR4302540.3766653/94‑1 (MQ=60)

                                                                          ACTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGC                     >  SRR4302540.1550347/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCCCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.7289141/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGTCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.4255857/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    <  SRR4302540.1838682/94‑1 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.1710377/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.3891473/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.6841270/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGATGCGCTGAACGGTTTGCTGGTATTCATTCAGTTCTTGCT                    >  SRR4302540.4358933/1‑94 (MQ=60)

                                                                           CTATTTACAATAGTGTTCACTAAGTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACatcttgctgttgttcactcagctcttgcg                    >  SRR4302540.8974348/1‑65 (MQ=60)

                                                                            TATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTC                   >  SRR4302540.7405801/1‑94 (MQ=60)

                                                                             ATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCA                  >  SRR4302540.8143024/1‑94 (MQ=60)

                                                                             ATTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCA                  <  SRR4302540.1383789/94‑1 (MQ=60)

                                                                              TTTACAATAGTGTTCACTAATTGTTGATCGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCAC                 <  SRR4302540.5847846/94‑1 (MQ=60)

                                                                              TTTACAATAGTGTTCACTAATTGTTGAACGCTGCGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCAC                 >  SRR4302540.2882548/1‑94 (MQ=60)

                                                                              TTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCAC                 <  SRR4302540.9624876/94‑1 (MQ=60)

                                                                              TTTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCAC                 >  SRR4302540.10087587/1‑94 (MQ=60)

                                                                               TTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACT                <  SRR4302540.2239404/94‑1 (MQ=60)

                                                                               TTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTCTCTCACT                >  SRR4302540.6715247/1‑94 (MQ=60)

                                                                               TTACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTAATTCAGTTCTTGCTCACT                >  SRR4302540.6817461/1‑94 (MQ=60)

                                                                                TACAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTG               >  SRR4302540.6621523/1‑94 (MQ=60)

                                                                                  CAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAT             >  SRR4302540.2707396/1‑94 (MQ=60)

                                                                                  CAATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGAT             >  SRR4302540.3733846/1‑94 (MQ=60)

                                                                                   AATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGCGGCTGCGCTGAACGTTCTGCTGGTATTCATTCAGTTCTTGCACACTGATC            >  SRR4302540.68229/1‑94 (MQ=60)

                                                                                   AATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATC            <  SRR4302540.9996193/94‑1 (MQ=60)

                                                                                   AATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATC            <  SRR4302540.4111462/94‑1 (MQ=60)

                                                                                   AATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATC            <  SRR4302540.4111463/94‑1 (MQ=60)

                                                                                   AATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATC            <  SRR4302540.5084484/94‑1 (MQ=60)

                                                                                    ATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCC           <  SRR4302540.4553430/94‑1 (MQ=60)

                                                                                    ATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCC           >  SRR4302540.24757/1‑94 (MQ=60)

                                                                                    ATAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCC           >  SRR4302540.7181784/1‑94 (MQ=60)

                                                                                     TAGTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCC          <  SRR4302540.354392/94‑1 (MQ=60)

                                                                                       GTGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTT        <  SRR4302540.6194361/94‑1 (MQ=60)

                                                                                        TGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTT       >  SRR4302540.9389945/1‑94 (MQ=60)

                                                                                        TGTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTT       >  SRR4302540.8119450/1‑94 (MQ=60)

                                                                                         GTTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTA      <  SRR4302540.9729167/94‑1 (MQ=60)

                                                                                          TTCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAG     >  SRR4302540.8605386/1‑94 (MQ=60)

                                                                                           TCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGC    >  SRR4302540.7609701/1‑94 (MQ=60)

                                                                                           TCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGC    >  SRR4302540.2429818/1‑94 (MQ=60)

                                                                                           TCACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGC    <  SRR4302540.8248689/94‑1 (MQ=60)

                                                                                            CACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCC   <  SRR4302540.960665/94‑1 (MQ=60)

                                                                                            CACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCA   >  SRR4302540.8713457/1‑94 (MQ=60)

                                                                                             ACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  SRR4302540.7077517/1‑94 (MQ=60)

                                                                                             ACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  SRR4302540.9947500/1‑94 (MQ=60)

                                                                                             ACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  SRR4302540.1724597/1‑94 (MQ=60)

                                                                                             ACTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  SRR4302540.1544845/1‑94 (MQ=60)

ACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAGGCTGCGCTGAACGTTTTGCTGGTATTCATTCAGTTCTTGCTCACTGATCCCTTTAGCCA  >  NC_000913/1570501‑1570687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`