Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,587,161 T→C I289V (ATT→GTT)  b1505 ← putative outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,587,1610TC100.0% 1138.8 / NA 347I289V (ATT→GTT) b1505putative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (179/168);  total (179/168)

Only 100 of 358 total aligned reads displayed.

CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250
                                                                                          |                                                                                         
  aTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCa                                                                                       >  2:5810551/1‑93 (MQ=255)
  aTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCa                                                                                       >  2:3921222/1‑93 (MQ=255)
  aTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCa                                                                                       >  2:3669934/1‑93 (MQ=255)
   tggCACCGAATGGAACGCTCTTATCACCGTACTTAAACGTGATGAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCAc                                                                                      <  2:4554682/91‑1 (MQ=255)
     gCACCGAATGGAACGCTCATATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCg                                                                                    >  2:5936903/1‑93 (MQ=255)
      cACCGAATGGACCGCTCTTATTACCGCACTCCATCGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGt                                                                                   <  1:5016907/93‑1 (MQ=255)
      cACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGt                                                                                   <  1:2648205/93‑1 (MQ=255)
       cccGAATGGAACGCTCTTATTACCGTACTTAAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTg                                                                                  <  1:6905213/92‑1 (MQ=255)
       aCCGAATGGAACGTTATTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTg                                                                                  <  1:5381503/93‑1 (MQ=255)
       aCCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTTCCGCCGATTTGTGCATTAAATGATGCTCTGGCCGCAGCACCGTg                                                                                  >  2:8871906/1‑93 (MQ=255)
        ccGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGa                                                                                 >  2:1192295/1‑93 (MQ=255)
         cGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAg                                                                                >  1:6459773/1‑93 (MQ=255)
          gAATGGACCGCTCTTATTACCGTACTTCACCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               <  2:9213068/93‑1 (MQ=255)
          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               <  1:1263974/93‑1 (MQ=255)
          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               >  2:1407861/1‑93 (MQ=255)
           aaTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              >  1:5611210/1‑93 (MQ=255)
           aaTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              >  2:849757/1‑93 (MQ=255)
           aaTGGAACGCTCTTATGACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              <  1:8583274/93‑1 (MQ=255)
            cttgAACGTTCTTATTGCGGTATTTAAACGTTGTTAATTTTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTg                                                                             <  2:1912959/90‑1 (MQ=255)
               gAACTCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGa                                                                          <  1:7636473/93‑1 (MQ=255)
               gAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGa                                                                          >  2:3351529/1‑93 (MQ=255)
                caCGCTCTTATTTCCCTTCTTCAACCTCATGATTTCTTGCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAt                                                                         <  1:4753537/92‑1 (MQ=255)
                  cGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGa                                                                       <  1:241750/93‑1 (MQ=255)
                   gCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      <  2:9883207/93‑1 (MQ=255)
                   gCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      >  1:4418013/1‑93 (MQ=255)
                     ttttattaCCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAg                                                                    <  1:1367420/91‑1 (MQ=255)
                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   <  2:1581577/93‑1 (MQ=255)
                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   >  1:8693352/1‑93 (MQ=255)
                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   <  1:5243142/93‑1 (MQ=255)
                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   >  2:5167327/1‑93 (MQ=255)
                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   >  1:1833433/1‑93 (MQ=255)
                       ttattcCCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTg                                                                  <  1:4313938/93‑1 (MQ=255)
                       ttattaCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTg                                                                  >  2:8555317/1‑93 (MQ=255)
                          ttaCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGAcc                                                               >  2:4904875/1‑93 (MQ=255)
                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            >  2:2916762/1‑93 (MQ=255)
                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTCGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            >  2:4422003/1‑93 (MQ=255)
                                tACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGtt                                                         >  1:8773535/1‑93 (MQ=255)
                                tACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGtt                                                         >  1:2304063/1‑93 (MQ=255)
                                 tcTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGttt                                                        <  1:2847427/92‑1 (MQ=255)
                                 aCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGttt                                                        >  2:7775174/1‑93 (MQ=255)
                                 aCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGAGATGACAGTGACCACGGgtt                                                        >  1:1093041/1‑93 (MQ=255)
                                  tttCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc                                                       <  1:7440868/92‑1 (MQ=255)
                                  cTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc                                                       >  2:1031223/1‑93 (MQ=255)
                                  cTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc                                                       <  2:276512/93‑1 (MQ=255)
                                   ttCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCa                                                      >  1:407368/1‑93 (MQ=255)
                                      aaCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATcc                                                   <  2:4386383/93‑1 (MQ=255)
                                      aaCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATcc                                                   >  1:6090222/1‑93 (MQ=255)
                                       aCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  <  1:1046649/93‑1 (MQ=255)
                                         gTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGt                                                >  1:6568030/1‑93 (MQ=255)
                                           cATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTc                                              >  2:6844014/1‑93 (MQ=255)
                                           cATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTc                                              >  1:30056/1‑93 (MQ=255)
                                           cATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTCGGATGACAGTGACCACGGGTTCATCAAGTTc                                              >  2:7253315/1‑93 (MQ=255)
                                             ttAATTCTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCaa                                            <  2:6096970/93‑1 (MQ=255)
                                             ttAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCaa                                            <  2:5621853/93‑1 (MQ=255)
                                             ttAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCaa                                            >  1:2267135/1‑93 (MQ=255)
                                               aaTCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACa                                          <  2:2623452/93‑1 (MQ=255)
                                               aaTACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACa                                          >  2:9035622/1‑93 (MQ=255)
                                               aaTACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACa                                          >  2:6258606/1‑93 (MQ=255)
                                                atccTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAt                                         <  2:2009708/90‑1 (MQ=255)
                                                 tACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAtt                                        >  2:8318093/1‑93 (MQ=255)
                                                  aCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTa                                       >  2:3097331/1‑93 (MQ=255)
                                                    tttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     >  2:656073/1‑93 (MQ=255)
                                                    tttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     <  2:6610446/93‑1 (MQ=255)
                                                    tttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     <  2:755666/93‑1 (MQ=255)
                                                    tttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     >  2:814777/1‑93 (MQ=255)
                                                     ttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCt                                    >  1:3570136/1‑93 (MQ=255)
                                                      tCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTg                                   >  2:6972961/1‑93 (MQ=255)
                                                      tCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTg                                   >  1:6710326/1‑93 (MQ=255)
                                                      tCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTg                                   >  2:8700871/1‑93 (MQ=255)
                                                       cccGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGc                                  <  1:2502020/93‑1 (MQ=255)
                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                >  1:8099815/1‑93 (MQ=255)
                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                >  1:3355091/1‑93 (MQ=255)
                                                           ccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAgg                              <  2:4303364/93‑1 (MQ=255)
                                                            cgATTTGTGCATTAAGTGTTGCTCTGGCAAAAGCGCCGTGAGTTGGGAAGACAGTGACCAATATTTCATCCAGTTCAAAAATATCTGCaaaag                             <  2:9266072/93‑4 (MQ=255)
                                                            cgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAggg                             >  1:6371940/1‑93 (MQ=255)
                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCGAGTTCAACATTATCTGCAAGGGa                            >  2:7171608/1‑93 (MQ=255)
                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  1:1488935/1‑93 (MQ=255)
                                                              aTTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGaa                           <  1:9236580/93‑1 (MQ=255)
                                                               tttGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAt                          <  1:948751/93‑1 (MQ=255)
                                                                    gCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTcgcg                     <  2:8015243/93‑1 (MQ=255)
                                                                     cATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGt                    >  1:3693940/1‑93 (MQ=255)
                                                                       ttAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTa                  >  2:2416621/1‑93 (MQ=255)
                                                                        tAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTaa                 <  2:9648070/93‑1 (MQ=255)
                                                                        tAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTaa                 <  1:9013237/93‑1 (MQ=255)
                                                                         aaaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAag                <  2:9594474/93‑1 (MQ=255)
                                                                         aaaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAag                <  2:844994/93‑1 (MQ=255)
                                                                          aaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAaga               >  2:4805383/1‑93 (MQ=255)
                                                                          aaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAaga               <  1:936982/93‑1 (MQ=255)
                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              <  2:2350643/93‑1 (MQ=255)
                                                                             gTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCa            >  2:4132339/1‑93 (MQ=255)
                                                                               tGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAac          <  1:7710931/93‑1 (MQ=255)
                                                                               tGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAac          <  2:2287546/93‑1 (MQ=255)
                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         <  1:6993706/93‑1 (MQ=255)
                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         >  1:9881924/1‑93 (MQ=255)
                                                                                 ctctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAacac        <  1:7108813/93‑1 (MQ=255)
                                                                                 ctctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAacac        <  2:6893734/93‑1 (MQ=255)
                                                                                  tctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg       >  1:9198218/1‑93 (MQ=255)
                                                                                  tctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg       <  2:7414866/93‑1 (MQ=255)
                                                                                   ctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACgg      <  2:5128872/93‑1 (MQ=255)
                                                                                       cAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGtttt  <  1:5744560/93‑1 (MQ=255)
                                                                                          |                                                                                         
CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCT  >  NC_000913/1587068‑1587254
                                                                                             |                                                                                             
TGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAAC                                                                                               <  SRR4302540.7954959/94‑1 (MQ=60)
TGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAAC                                                                                               >  SRR4302540.5711547/1‑94 (MQ=60)
 GACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACA                                                                                              >  SRR4302540.9548811/1‑94 (MQ=60)
 GACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACA                                                                                              <  SRR4302540.934809/94‑1 (MQ=60)
  ACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACTTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAG                                                                                             <  SRR4302540.10147653/94‑1 (MQ=60)
   CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGC                                                                                            >  SRR4302540.968046/1‑94 (MQ=60)
    AATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCA                                                                                           >  SRR4302540.2861605/1‑94 (MQ=60)
    AATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCA                                                                                           <  SRR4302540.1500351/94‑1 (MQ=60)
     ATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCAC                                                                                          >  SRR4302540.7913336/1‑94 (MQ=60)
      TTGCACGGAATGGACCGCTCTTATCGCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACC                                                                                         <  SRR4302540.1299219/94‑1 (MQ=60)
      TTGCACCGAATGGGACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCAGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACC                                                                                         >  SRR4302540.5613537/1‑94 (MQ=60)
      TTGCACCGAATGGAACGCTCTTATTACGGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGCGCATTCAATGTTGCTCTGGCAACAGCACG                                                                                         >  SRR4302540.8201341/1‑94 (MQ=60)
      TTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACC                                                                                         >  SRR4302540.8011961/1‑94 (MQ=60)
      TTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACC                                                                                         >  SRR4302540.2257201/1‑94 (MQ=60)
       TGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCG                                                                                        >  SRR4302540.7227534/1‑94 (MQ=60)
       TGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCG                                                                                        <  SRR4302540.9125218/94‑1 (MQ=60)
        GCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGT                                                                                       >  SRR4302540.9320903/1‑94 (MQ=60)
         cccccAATGGAACGCTTTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTG                                                                                      <  SRR4302540.4755615/89‑1 (MQ=60)
         CACCGAATGGACCGCTCTTATTACCGCACTCCATCGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTG                                                                                      <  SRR4302540.5071223/94‑1 (MQ=60)
         CACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTG                                                                                      <  SRR4302540.2676933/94‑1 (MQ=60)
         CACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTG                                                                                      <  SRR4302540.2676934/94‑1 (MQ=60)
         CACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTG                                                                                      >  SRR4302540.2330726/1‑94 (MQ=60)
          CCCGAATGGAACGCTCTTATTACCGTACTTAAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGA                                                                                     <  SRR4302540.6981987/94‑1 (MQ=60)
          ACCGAATGGAACGTTATTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGA                                                                                     <  SRR4302540.5440691/94‑1 (MQ=60)
          ACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGA                                                                                     >  SRR4302540.6650248/1‑94 (MQ=60)
          ACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGA                                                                                     >  SRR4302540.7736113/1‑94 (MQ=60)
          ACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGA                                                                                     >  SRR4302540.7736114/1‑94 (MQ=60)
           CCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAG                                                                                    >  SRR4302540.6531672/1‑94 (MQ=60)
           CCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGGGCATTAAATGTTGCTCTGGCAACAGCACCGTGAG                                                                                    >  SRR4302540.3405030/1‑94 (MQ=60)
            CGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCTCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGT                                                                                   >  SRR4302540.5177982/1‑94 (MQ=60)
            CGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGT                                                                                   >  SRR4302540.4424543/1‑94 (MQ=60)
            CGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGT                                                                                   >  SRR4302540.1141379/1‑94 (MQ=60)
            CGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGACTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGT                                                                                   <  SRR4302540.483871/94‑1 (MQ=60)
             GAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTT                                                                                  >  SRR4302540.5672938/1‑94 (MQ=60)
             GAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTT                                                                                  <  SRR4302540.1276962/94‑1 (MQ=60)
             GAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTT                                                                                  >  SRR4302540.1119017/1‑94 (MQ=60)
              AATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTG                                                                                 >  SRR4302540.2508762/1‑94 (MQ=60)
              AATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTG                                                                                 <  SRR4302540.8683056/94‑1 (MQ=60)
              AATGGAACGCTCTTATGACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTG                                                                                 <  SRR4302540.8683055/94‑1 (MQ=60)
                 GGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGA                                                                              >  SRR4302540.7547310/1‑94 (MQ=60)
                  gaaccgttttattcccggactcCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAT                                                                             <  SRR4302540.22336/72‑1 (MQ=60)
                  GAACTCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAT                                                                             <  SRR4302540.7722387/94‑1 (MQ=60)
                  GAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAT                                                                             <  SRR4302540.6867835/94‑1 (MQ=60)
                  GAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAT                                                                             >  SRR4302540.2299755/1‑94 (MQ=60)
                   cacgctcttatttcccttcttcaacctcatgatttcttgCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATG                                                                            <  SRR4302540.4804260/55‑1 (MQ=60)
                   AACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATG                                                                            >  SRR4302540.6277444/1‑94 (MQ=60)
                     CGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAC                                                                          >  SRR4302540.5334492/1‑94 (MQ=60)
                     CGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAC                                                                          >  SRR4302540.4465883/1‑94 (MQ=60)
                     CGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAC                                                                          <  SRR4302540.244087/94‑1 (MQ=60)
                      GCTCTTATTACCGTCCTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACA                                                                         <  SRR4302540.1538424/94‑1 (MQ=60)
                      GCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACA                                                                         >  SRR4302540.6497690/1‑94 (MQ=60)
                       CTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAG                                                                        <  SRR4302540.2180641/94‑1 (MQ=60)
                       CTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAG                                                                        <  SRR4302540.1057466/94‑1 (MQ=60)
                       CTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAG                                                                        <  SRR4302540.1057467/94‑1 (MQ=60)
                        TTTTATTACCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGT                                                                       <  SRR4302540.1381899/94‑1 (MQ=60)
                        TTTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGT                                                                       <  SRR4302540.1668174/94‑1 (MQ=60)
                        TCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGT                                                                       >  SRR4302540.1853500/1‑94 (MQ=60)
                        TCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGT                                                                       <  SRR4302540.7160151/94‑1 (MQ=60)
                        TCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGT                                                                       >  SRR4302540.8794277/1‑94 (MQ=60)
                         CTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTG                                                                      <  SRR4302540.5300336/94‑1 (MQ=60)
                          TTATTCCCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGA                                                                     <  SRR4302540.4360907/94‑1 (MQ=60)
                          TTATTACCGTACTTCAACGTAATTAAGCCTTACCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGA                                                                     <  SRR4302540.4360908/94‑1 (MQ=60)
                             TTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCA                                                                  <  SRR4302540.1478414/94‑1 (MQ=60)
                              TCCCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCAC                                                                 <  SRR4302540.8936484/94‑1 (MQ=60)
                               TCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACG                                                                <  SRR4302540.7786587/94‑1 (MQ=60)
                                CCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGG                                                               <  SRR4302540.2939708/94‑1 (MQ=60)
                                CCGTACTACAACATCATTAATGCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACTACGG                                                               <  SRR4302540.6358618/94‑1 (MQ=60)
                                 CGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGT                                                              >  SRR4302540.2034795/1‑94 (MQ=60)
                                 CGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGT                                                              <  SRR4302540.477604/94‑1 (MQ=60)
                                  GTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTT                                                             >  SRR4302540.8875179/1‑94 (MQ=60)
                                  GTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTT                                                             >  SRR4302540.2328854/1‑94 (MQ=60)
                                  GTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTT                                                             <  SRR4302540.9356602/94‑1 (MQ=60)
                                   TACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTT                                                            >  SRR4302540.259005/1‑94 (MQ=60)
                                   TACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGAGATGACAGTGACCACGGGTT                                                            >  SRR4302540.1104270/1‑94 (MQ=60)
                                    TCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTC                                                           <  SRR4302540.2878253/94‑1 (MQ=60)
                                    ACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTC                                                           >  SRR4302540.7522407/1‑94 (MQ=60)
                                     TTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCA                                                          <  SRR4302540.7523772/94‑1 (MQ=60)
                                     CTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCA                                                          <  SRR4302540.5368794/94‑1 (MQ=60)
                                     CTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCA                                                          >  SRR4302540.411628/1‑94 (MQ=60)
                                     CTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCA                                                          >  SRR4302540.6237516/1‑94 (MQ=60)
                                     CTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCA                                                          <  SRR4302540.7523773/94‑1 (MQ=60)
                                      TTCAACGTCATTAATTCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAT                                                         <  SRR4302540.6616993/94‑1 (MQ=60)
                                      TTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAT                                                         <  SRR4302540.1394626/94‑1 (MQ=60)
                                      TTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAT                                                         >  SRR4302540.3934675/1‑94 (MQ=60)
                                      TTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAT                                                         <  SRR4302540.7088185/94‑1 (MQ=60)
                                        CAACGTCATTAATATTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCC                                                       <  SRR4302540.4886423/94‑1 (MQ=60)
                                        CAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCC                                                       >  SRR4302540.6158002/1‑94 (MQ=60)
                                        CAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCA                                                       >  SRR4302540.2482612/1‑94 (MQ=60)
                                          ACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAG                                                     <  SRR4302540.1057285/94‑1 (MQ=60)
                                          ACGTCATAAATCCTTCCCCGCCGATTTGTGCATGAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAG                                                     <  SRR4302540.9796167/94‑1 (MQ=60)
                                           CGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGT                                                    >  SRR4302540.6640812/1‑94 (MQ=60)
                                            GTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTT                                                   <  SRR4302540.5447623/94‑1 (MQ=60)
                                            GTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGAGACCACGGTTTCATCCAGTT                                                   >  SRR4302540.6575775/1‑94 (MQ=60)
                                             TCATTAATCTTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTC                                                  <  SRR4302540.2350278/94‑1 (MQ=60)
                                             TCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTC                                                  >  SRR4302540.30376/1‑94 (MQ=60)
                                              CATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCA                                                 <  SRR4302540.4656140/94‑1 (MQ=60)
                                               ATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAA                                                >  SRR4302540.2291458/1‑94 (MQ=60)
                                                 TAATCCTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCCCCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACA                                              <  SRR4302540.3851755/94‑1 (MQ=60)
                                                 TAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACA                                              >  SRR4302540.5693836/1‑94 (MQ=60)
                                                 TAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACA                                              >  SRR4302540.5693837/1‑94 (MQ=60)
                                                 TAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACA                                              >  SRR4302540.5978809/1‑94 (MQ=60)
                                                 TAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACA                                              >  SRR4302540.3827105/1‑94 (MQ=60)
                                                   ATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATT                                            >  SRR4302540.8737071/1‑94 (MQ=60)
                                                    TACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTA                                           >  SRR4302540.3383592/1‑94 (MQ=60)
                                                    TACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTA                                           <  SRR4302540.7068651/94‑1 (MQ=60)
                                                     ACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTAT                                          >  SRR4302540.6752106/1‑94 (MQ=60)
                                                      CTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATC                                         <  SRR4302540.8543810/94‑1 (MQ=60)
                                                      CTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATC                                         >  SRR4302540.9507271/1‑94 (MQ=60)
                                                      CTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATC                                         >  SRR4302540.9341760/1‑94 (MQ=60)
                                                       TTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCT                                        >  SRR4302540.3609135/1‑94 (MQ=60)
                                                       TTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCT                                        <  SRR4302540.4394704/94‑1 (MQ=60)
                                                       TTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCT                                        <  SRR4302540.9317345/94‑1 (MQ=60)
                                                       TTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCT                                        >  SRR4302540.3609136/1‑94 (MQ=60)
                                                        TTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTG                                       <  SRR4302540.3396540/94‑1 (MQ=60)
                                                        TTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTG                                       >  SRR4302540.6784374/1‑94 (MQ=60)
                                                        TTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTG                                       >  SRR4302540.7474239/1‑94 (MQ=60)
                                                        TTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGACTACAGTGCCCACGGTTTCATCCAGTCCAACATTATCTG                                       >  SRR4302540.6784376/1‑94 (MQ=60)
                                                        TCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTG                                       <  SRR4302540.7155450/94‑1 (MQ=60)
                                                          CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCA                                     <  SRR4302540.2529019/94‑1 (MQ=60)
                                                           CCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAA                                    >  SRR4302540.8193825/1‑94 (MQ=60)
                                                           CCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAA                                    >  SRR4302540.3391859/1‑94 (MQ=60)
                                                            CGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAG                                   <  SRR4302540.2493522/94‑1 (MQ=60)
                                                              CCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGG                                 >  SRR4302540.6442889/1‑94 (MQ=60)
                                                               CGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGA                                >  SRR4302540.1505297/1‑94 (MQ=60)
                                                               CGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGA                                >  SRR4302540.2327100/1‑94 (MQ=60)
                                                               CGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGA                                >  SRR4302540.1252566/1‑94 (MQ=60)
                                                               CGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGA                                <  SRR4302540.10049341/94‑1 (MQ=60)
                                                                GATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAA                               >  SRR4302540.3210772/1‑94 (MQ=60)
                                                                GATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAA                               >  SRR4302540.6938762/1‑94 (MQ=60)
                                                                GATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAA                               <  SRR4302540.9415283/94‑1 (MQ=60)
                                                                 ATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAT                              <  SRR4302540.4315373/94‑1 (MQ=60)
                                                                 ATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAT                              <  SRR4302540.4315374/94‑1 (MQ=60)
                                                                 ATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAT                              <  SRR4302540.9347245/94‑1 (MQ=60)
                                                                  TTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATT                             <  SRR4302540.958626/94‑1 (MQ=60)
                                                                    TGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCG                           <  SRR4302540.973053/94‑1 (MQ=60)
                                                                    TGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCG                           >  SRR4302540.9584268/1‑94 (MQ=60)
                                                                    TGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCG                           <  SRR4302540.3722199/94‑1 (MQ=60)
                                                                       GCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGT                        >  SRR4302540.3734281/1‑94 (MQ=60)
                                                                       GCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGT                        <  SRR4302540.6551441/94‑1 (MQ=60)
                                                                       GCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGT                        <  SRR4302540.6122923/94‑1 (MQ=60)
                                                                        CATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTT                       <  SRR4302540.2315669/94‑1 (MQ=60)
                                                                         ATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTA                      >  SRR4302540.5866727/1‑94 (MQ=60)
                                                                         ATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTA                      >  SRR4302540.3454681/1‑94 (MQ=60)
                                                                           TAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAG                    <  SRR4302540.9121371/94‑1 (MQ=60)
                                                                           TAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAG                    <  SRR4302540.878092/94‑1 (MQ=60)
                                                                            AAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGA                   <  SRR4302540.4799649/94‑1 (MQ=60)
                                                                             AATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAG                  <  SRR4302540.946795/94‑1 (MQ=60)
                                                                             AATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAG                  >  SRR4302540.5200498/1‑94 (MQ=60)
                                                                               TGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCA                <  SRR4302540.2739469/94‑1 (MQ=60)
                                                                                GTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAA               <  SRR4302540.5596949/94‑1 (MQ=60)
                                                                                GTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAA               >  SRR4302540.3258427/1‑94 (MQ=60)
                                                                                 TTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAAC              <  SRR4302540.8803743/94‑1 (MQ=60)
                                                                                 TTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAAC              <  SRR4302540.8803753/94‑1 (MQ=60)
                                                                                  TGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACA             >  SRR4302540.9997309/1‑94 (MQ=60)
                                                                                  TGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACA             <  SRR4302540.2619982/94‑1 (MQ=60)
                                                                                  TGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACA             <  SRR4302540.7799603/94‑1 (MQ=60)
                                                                                   GCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACAC            >  SRR4302540.2883180/1‑94 (MQ=60)
                                                                                   GCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACAC            <  SRR4302540.7071325/94‑1 (MQ=60)
                                                                                   GCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACAC            <  SRR4302540.7071327/94‑1 (MQ=60)
                                                                                    CTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACG           >  SRR4302540.9308556/1‑94 (MQ=60)
                                                                                    CTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACG           >  SRR4302540.8553872/1‑94 (MQ=60)
                                                                                    CTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACG           <  SRR4302540.1316927/94‑1 (MQ=60)
                                                                                    CTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACG           <  SRR4302540.7187928/94‑1 (MQ=60)
                                                                                     TCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGG          <  SRR4302540.901270/94‑1 (MQ=60)
                                                                                     TCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGG          <  SRR4302540.901269/94‑1 (MQ=60)
                                                                                     TCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGG          <  SRR4302540.5155661/94‑1 (MQ=60)
                                                                                      CTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGT         >  SRR4302540.6495012/1‑94 (MQ=60)
                                                                                       TGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTT        >  SRR4302540.915223/1‑94 (MQ=60)
                                                                                         GCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT      >  SRR4302540.9587891/1‑94 (MQ=60)
                                                                                          CAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTC     >  SRR4302540.4418734/1‑94 (MQ=60)
                                                                                          CAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTC     <  SRR4302540.5807897/94‑1 (MQ=60)
                                                                                            ACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTC   <  SRR4302540.8088950/94‑1 (MQ=60)
                                                                                             CAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCT  <  SRR4302540.4802095/94‑1 (MQ=60)
                                                                                             CAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCT  <  SRR4302540.7551800/94‑1 (MQ=60)
                                                                                             CAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCT  <  SRR4302540.8460965/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCT  >  NC_000913/1587068‑1587254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑