Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,713,565 |
G→A |
H117Y (CAT→TAT) |
pdxY ← |
pyridoxal kinase 2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,713,565 | 0 | G | A | 99.6%
| 872.1
/ NA
| 242 | H117Y (CAT→TAT) | pdxY | pyridoxal kinase 2 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (117/124); minor base C (1/0); total (118/124) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 246 total aligned reads displayed.
GATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCG > NC_000913/1713475‑1713654
|
gATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAc > 2:476972/1‑93 (MQ=255)
gATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAc < 2:8112140/93‑1 (MQ=255)
gATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAc > 2:6353635/1‑93 (MQ=255)
gATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAc > 1:2883598/1‑93 (MQ=255)
aTTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAcc < 1:7333538/93‑1 (MQ=255)
aTTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAcc < 2:4186899/93‑1 (MQ=255)
ttGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCa < 1:7168549/93‑1 (MQ=255)
ttGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCa < 1:9107144/93‑1 (MQ=255)
ttGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCa < 2:6294630/93‑1 (MQ=255)
gcgcAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTa > 1:6124805/1‑93 (MQ=255)
cgcAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTAc < 1:6234108/93‑1 (MQ=255)
cAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCg > 2:2563470/1‑93 (MQ=255)
cAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCg < 1:7696345/93‑1 (MQ=255)
tGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGAt < 2:3785364/93‑1 (MQ=255)
tGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGAt > 2:4636282/1‑93 (MQ=255)
atatCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCg > 1:3465041/1‑93 (MQ=255)
atatCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTGCCGGATAACCCATTACCGGATCg > 2:5532278/1‑93 (MQ=255)
tatCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGc < 1:9067790/93‑1 (MQ=255)
atCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCa > 2:5234048/1‑93 (MQ=255)
tCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCaa < 2:9287119/93‑1 (MQ=255)
tCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCaa > 1:445132/1‑93 (MQ=255)
tCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCaa < 2:9467912/93‑1 (MQ=255)
gCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCaaaa < 2:3573613/93‑1 (MQ=255)
cTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCaaaaa > 2:2187887/1‑93 (MQ=255)
tGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAat > 1:3477742/1‑93 (MQ=255)
ggcaggcaAACCGTGCCGCACATGAAACTCTGCGACTCCCGGTGCAACGATACAGCCTTTTTCCGTATAACCCATTACCGGATCGCAAAAata < 2:8530122/93‑1 (MQ=255)
ggcaggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAata > 2:7527186/1‑93 (MQ=255)
ggcaggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAata < 1:1233844/93‑1 (MQ=255)
gcaggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAatat < 2:775280/93‑1 (MQ=255)
caggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAtt < 1:4507501/93‑1 (MQ=255)
aggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAttt < 1:4958708/93‑1 (MQ=255)
aggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAttt < 2:5955562/93‑1 (MQ=255)
aggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAttt < 1:5125980/93‑1 (MQ=255)
aggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAttt > 2:4297238/1‑93 (MQ=255)
ggcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTc > 1:6042367/1‑93 (MQ=255)
gcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCg > 1:9814723/1‑93 (MQ=255)
gcaAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCg > 1:8824004/1‑93 (MQ=255)
caAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGc < 1:9384450/93‑1 (MQ=255)
caAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGc < 2:1830923/93‑1 (MQ=255)
aaaCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGcc < 2:1300661/93‑1 (MQ=255)
aaaCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGcc < 1:1779620/93‑1 (MQ=255)
agccGTGCCGCACATGAAACTCTGCAACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCt < 2:6187319/91‑1 (MQ=255)
aaCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCt < 1:10020624/93‑1 (MQ=255)
aaCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCt < 1:3923914/93‑1 (MQ=255)
aCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTg < 1:4734236/93‑1 (MQ=255)
aCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTg > 2:9590112/1‑93 (MQ=255)
aCCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTg > 2:483302/1‑93 (MQ=255)
cGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCg < 2:2306859/93‑1 (MQ=255)
tGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGa > 1:949407/1‑93 (MQ=255)
tGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGa < 2:445132/93‑1 (MQ=255)
gCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGAt > 1:672420/1‑93 (MQ=255)
cGCACATGAAACTCTGCGACGCCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTc < 2:6709850/93‑1 (MQ=255)
gCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTcg > 1:7449880/1‑93 (MQ=255)
gacaTGCACCTCTCCGGCCCCCGGTGCAACGATACCGCCTTTTTCCGGATCACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTcgc < 2:3173492/92‑1 (MQ=255)
cgtGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCgg > 2:7027164/3‑93 (MQ=255)
aTGAACCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGc < 1:7123777/93‑1 (MQ=255)
aTGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGc > 1:7828741/1‑93 (MQ=255)
tGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCt > 1:5485913/1‑93 (MQ=255)
tGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCt > 2:3419611/1‑93 (MQ=255)
tGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCt > 1:5255922/1‑93 (MQ=255)
gAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCtt > 2:2447736/1‑93 (MQ=255)
aaaCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCttt < 2:4999037/93‑1 (MQ=255)
aaCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTc > 2:9418003/1‑93 (MQ=255)
aaCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTc > 1:8750348/1‑93 (MQ=255)
aCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCa > 2:9142069/1‑93 (MQ=255)
aCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCa < 2:2792724/93‑1 (MQ=255)
gCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTga < 1:3260094/93‑1 (MQ=255)
cGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgac < 1:8795220/93‑1 (MQ=255)
cGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgac > 2:8737287/1‑93 (MQ=255)
cacCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgacgga > 2:3332418/1‑93 (MQ=255)
cacCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgacgga > 1:1532407/1‑93 (MQ=255)
acCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgacggac > 1:6671861/1‑93 (MQ=255)
cccGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgacggacg > 2:1626526/1‑93 (MQ=255)
cccGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTgacggacg < 1:8241042/93‑1 (MQ=255)
ccGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGCCGa > 1:8620437/1‑93 (MQ=255)
ccGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGa < 2:8841967/93‑1 (MQ=255)
ccGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGa < 1:274562/93‑1 (MQ=255)
cGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGAt > 2:2863434/1‑93 (MQ=255)
ggTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATa > 1:2401532/1‑93 (MQ=255)
ggTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATa > 1:4077538/1‑93 (MQ=255)
agTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATa < 1:596611/92‑1 (MQ=255)
tGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATAcc > 2:7242424/1‑93 (MQ=255)
tGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATAcc > 2:7903115/1‑93 (MQ=255)
aaCGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAg < 1:901618/93‑1 (MQ=255)
cGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGa < 1:9120991/93‑1 (MQ=255)
gATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGaa > 2:1110718/1‑92 (MQ=255)
gATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATAACGAGGat > 1:3942662/1‑93 (MQ=255)
aTACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGata < 1:9786449/93‑1 (MQ=255)
aTACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGata < 2:5770721/93‑1 (MQ=255)
aCAGCCTTTTTCCGGATAACCCATTACCGAATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATg > 1:431656/1‑93 (MQ=255)
aGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGtt < 2:405660/93‑1 (MQ=255)
ccTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCa < 2:9733037/93‑1 (MQ=255)
tttttCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCAcc > 2:1699095/1‑93 (MQ=255)
ttttCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCAccc < 2:7491017/93‑1 (MQ=255)
ttttCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCAccc < 2:5881551/93‑1 (MQ=255)
ttCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTg > 1:2196948/1‑93 (MQ=255)
ccGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCt < 1:4569769/93‑1 (MQ=255)
ggATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTcc < 2:8376911/93‑1 (MQ=255)
ggATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTcc < 2:3525759/93‑1 (MQ=255)
gATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCTGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTccg < 2:6591710/93‑1 (MQ=255)
|
GATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCG > NC_000913/1713475‑1713654
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCG > NC_000913/1713472‑1713657
|
CCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATA > SRR4302540.6903479/1‑94 (MQ=60)
CCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATA > SRR4302540.112179/1‑94 (MQ=60)
AGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAC < SRR4302540.10038879/94‑1 (MQ=60)
AGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAC > SRR4302540.2914979/1‑94 (MQ=60)
AGATGTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAAC < SRR4302540.1774509/94‑1 (MQ=60)
GATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACC < SRR4302540.10023743/94‑1 (MQ=60)
GATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACC < SRR4302540.4314198/94‑1 (MQ=60)
ATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCC < SRR4302540.7415395/94‑1 (MQ=60)
ATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCC < SRR4302540.5296177/94‑1 (MQ=60)
TTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCA > SRR4302540.6048385/1‑94 (MQ=60)
TTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCA > SRR4302540.6791474/1‑94 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT < SRR4302540.9216591/94‑1 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT < SRR4302540.9216592/94‑1 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT < SRR4302540.9216593/94‑1 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT > SRR4302540.787741/1‑94 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT < SRR4302540.7248465/94‑1 (MQ=60)
TTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCAT < SRR4302540.3787644/94‑1 (MQ=60)
GGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTA > SRR4302540.6193023/1‑94 (MQ=60)
GCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTAC > SRR4302540.1364506/1‑94 (MQ=60)
GCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTCCGACTCCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTCC < SRR4302540.4688368/94‑1 (MQ=60)
CGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACC < SRR4302540.6303442/94‑1 (MQ=60)
CGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACC < SRR4302540.7235914/94‑1 (MQ=60)
CGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACC < SRR4302540.8847968/94‑1 (MQ=60)
GCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCG > SRR4302540.7364940/1‑94 (MQ=60)
CAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGG < SRR4302540.7784069/94‑1 (MQ=60)
CAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGG < SRR4302540.4797327/94‑1 (MQ=60)
AATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGA > SRR4302540.6568990/1‑94 (MQ=60)
GATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCG > SRR4302540.3502760/1‑94 (MQ=60)
GATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCG > SRR4302540.3507187/1‑94 (MQ=60)
GATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCAACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCG < SRR4302540.2366257/94‑1 (MQ=60)
TATTGCTGGCAGGCAAACCGTTCTGCACATGAAACCCGGCGACACCCGGTGCAACGATACAGCCGTTGTCCGGATAACCCACCACCGGATCGCA > SRR4302540.9029590/1‑94 (MQ=44)
TATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCA < SRR4302540.9176669/94‑1 (MQ=60)
ATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTCTTCCGGATAACCCATTACCGGATCGCAA > SRR4302540.449872/1‑94 (MQ=60)
GCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAA < SRR4302540.120114/94‑1 (MQ=60)
CTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAAT > SRR4302540.3515608/1‑94 (MQ=60)
CTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAAT > SRR4302540.4520767/1‑94 (MQ=60)
GGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAT < SRR4302540.1246446/94‑1 (MQ=60)
GGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAT < SRR4302540.9322178/94‑1 (MQ=60)
GCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATT > SRR4302540.9107685/1‑94 (MQ=60)
GCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATT < SRR4302540.5070617/94‑1 (MQ=60)
CAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTT < SRR4302540.4556348/94‑1 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTC > SRR4302540.6109477/1‑94 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTC > SRR4302540.6109476/1‑94 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTC < SRR4302540.6257628/94‑1 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTC < SRR4302540.5181497/94‑1 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTC < SRR4302540.5012309/94‑1 (MQ=60)
AGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGCGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATAGTTC > SRR4302540.6109479/1‑94 (MQ=60)
GGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCTATTACCGGATCGCAAAAATATTTCG < SRR4302540.3794333/94‑1 (MQ=60)
GGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCG > SRR4302540.8926041/1‑94 (MQ=60)
GGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCG > SRR4302540.9929577/1‑94 (MQ=60)
CAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCC < SRR4302540.9496149/94‑1 (MQ=60)
AAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCT > SRR4302540.9599395/1‑94 (MQ=60)
AAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCT < SRR4302540.1798940/94‑1 (MQ=60)
AACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTG < SRR4302540.10137244/94‑1 (MQ=60)
AACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTG < SRR4302540.3966375/94‑1 (MQ=60)
ACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGC < SRR4302540.4784785/94‑1 (MQ=60)
GTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGA > SRR4302540.959283/1‑94 (MQ=60)
GTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGA > SRR4302540.9446125/1‑94 (MQ=60)
TGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGAT < SRR4302540.9137610/94‑1 (MQ=60)
TGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGAT > SRR4302540.679622/1‑94 (MQ=60)
CGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCG > SRR4302540.7532918/1‑94 (MQ=60)
GCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGC < SRR4302540.6499212/94‑1 (MQ=60)
ACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGG > SRR4302540.2786367/1‑94 (MQ=60)
CATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGC > SRR4302540.7920224/1‑94 (MQ=60)
ATGAACCTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCT < SRR4302540.7203107/94‑1 (MQ=60)
ATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCT > SRR4302540.5915195/1‑94 (MQ=60)
ATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCT > SRR4302540.5546303/1‑94 (MQ=60)
ATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCT > SRR4302540.5313251/1‑94 (MQ=60)
ATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGACTGCGGCTTCGCGGCT > SRR4302540.9659945/1‑94 (MQ=60)
TGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTT < SRR4302540.317194/94‑1 (MQ=60)
AAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTC < SRR4302540.8899600/94‑1 (MQ=60)
AAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTC > SRR4302540.8851884/1‑94 (MQ=60)
AAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTC > SRR4302540.8851883/1‑94 (MQ=60)
AAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTC < SRR4302540.743197/94‑1 (MQ=60)
AACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCA > SRR4302540.9193048/1‑94 (MQ=60)
AACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCA < SRR4302540.4643294/94‑1 (MQ=60)
ACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCAC < SRR4302540.7780360/94‑1 (MQ=60)
CTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACC > SRR4302540.2739549/1‑94 (MQ=60)
TCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCT > SRR4302540.4599355/1‑94 (MQ=60)
GCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGAC < SRR4302540.3295650/94‑1 (MQ=60)
CGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACG > SRR4302540.8707808/1‑94 (MQ=60)
CGACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACG < SRR4302540.8896934/94‑1 (MQ=60)
ACACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGA > SRR4302540.1549374/1‑94 (MQ=60)
CACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGAC < SRR4302540.5330344/94‑1 (MQ=60)
CACCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGAC > SRR4302540.6745578/1‑94 (MQ=60)
CCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGCCGA > SRR4302540.8720572/1‑94 (MQ=60)
CCCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGA < SRR4302540.8336826/94‑1 (MQ=60)
CCGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGAT < SRR4302540.277263/94‑1 (MQ=60)
CGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATA > SRR4302540.2427429/1‑94 (MQ=60)
CGGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATA > SRR4302540.4121497/1‑94 (MQ=60)
AGTGCAACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATAC < SRR4302540.603017/94‑1 (MQ=60)
AACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGG < SRR4302540.911196/94‑1 (MQ=60)
ACGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGA > SRR4302540.1767729/1‑94 (MQ=60)
CGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGAT < SRR4302540.9230624/94‑1 (MQ=60)
CGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGAT > SRR4302540.3985248/1‑94 (MQ=60)
CGATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATAACGAGGAT > SRR4302540.3985249/1‑94 (MQ=60)
GATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATA < SRR4302540.4511741/94‑1 (MQ=60)
GATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATA > SRR4302540.198257/1‑94 (MQ=60)
ATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATAT < SRR4302540.9901118/94‑1 (MQ=60)
ATACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATAT < SRR4302540.9901117/94‑1 (MQ=60)
TACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATG > SRR4302540.8054534/1‑94 (MQ=60)
TACAGCCTTTTTCCGGATAACCCATTACCGAATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATG > SRR4302540.436220/1‑94 (MQ=60)
ACAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGT < SRR4302540.177574/94‑1 (MQ=60)
CAGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTT > SRR4302540.5329527/1‑94 (MQ=60)
AGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTC > SRR4302540.7608189/1‑94 (MQ=60)
AGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTC > SRR4302540.2792596/1‑94 (MQ=60)
AGCCTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTC < SRR4302540.2331343/94‑1 (MQ=60)
CTTTTTCCGGATAACCTATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACC > SRR4302540.7948045/1‑94 (MQ=60)
CTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACC > SRR4302540.507318/1‑94 (MQ=60)
CTTTTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACC < SRR4302540.6851573/94‑1 (MQ=60)
TTTCCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTG > SRR4302540.2220674/1‑94 (MQ=60)
CCGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTC < SRR4302540.4619096/94‑1 (MQ=60)
CCGGATAACCCATTACCGGATCGCAAAAATATTACGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTC < SRR4302540.4434425/94‑1 (MQ=60)
CGGATAACCCATTACCGGATCGCAAAAATCTTTCTCCTTCCGATTCCCGTCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCC < SRR4302540.3316638/94‑1 (MQ=60)
CGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCC < SRR4302540.4031343/94‑1 (MQ=60)
CGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCC < SRR4302540.3316639/94‑1 (MQ=60)
CGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCC > SRR4302540.7360765/1‑94 (MQ=60)
CGGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCC > SRR4302540.6865112/1‑94 (MQ=60)
GGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCG > SRR4302540.4336272/1‑94 (MQ=60)
GGATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCG > SRR4302540.8812364/1‑94 (MQ=60)
GATAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGC < SRR4302540.9615030/94‑1 (MQ=60)
TAACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCG < SRR4302540.293315/94‑1 (MQ=60)
|
CCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCG > NC_000913/1713472‑1713657
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
