Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,736,520 |
A→G |
Q218R (CAG→CGG) |
purR → |
PurR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,736,520 | 0 | A | G | 100.0%
| 555.3
/ NA
| 171 | Q218R (CAG→CGG) | purR | PurR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/84); total (87/84) |
Only 100 of 179 total aligned reads displayed.
TGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCG > NC_000913/1736430‑1736609
|
tGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCggg < 2:1631945/93‑1 (MQ=255)
ggAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCgggg < 2:2395713/93‑1 (MQ=255)
gAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCggggg > 1:4003588/1‑92 (MQ=255)
aCGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGa < 1:9225174/93‑1 (MQ=255)
aCGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGa > 2:5370063/1‑93 (MQ=255)
tAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACtt < 2:545350/93‑1 (MQ=255)
tAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACtt < 2:3290925/93‑1 (MQ=255)
aaCACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACttt < 1:6318016/93‑1 (MQ=255)
aaCACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACttt > 1:2189994/1‑93 (MQ=255)
acacCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTg > 2:1790421/1‑93 (MQ=255)
acCGGCGCAGGCCGCCTTGCCGGGTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGaa > 1:1158458/1‑93 (MQ=255)
ggCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCt < 2:7810062/93‑1 (MQ=255)
ggCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCt > 1:4063353/1‑93 (MQ=255)
ggCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCt < 1:4813147/93‑1 (MQ=255)
ggCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCt > 2:9854137/1‑93 (MQ=255)
cgcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGa < 2:1273859/93‑1 (MQ=255)
cgcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGa > 2:2562937/1‑93 (MQ=255)
cgcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGa < 1:1617121/93‑1 (MQ=255)
cgcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGa < 1:1617119/93‑1 (MQ=255)
cgcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGa < 1:967855/93‑1 (MQ=255)
gcAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGaa < 2:7937965/93‑1 (MQ=255)
cAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAAt < 2:4878790/93‑1 (MQ=255)
cAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAAt < 2:1681032/93‑1 (MQ=255)
aGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATc > 1:94273/1‑93 (MQ=255)
ggCCGCCTTTCCGGTTTTATGAAAGCGAGGGAAGAAACGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATcc < 1:6878071/93‑1 (MQ=255)
ggCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATcc < 1:4136220/93‑1 (MQ=255)
ggCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATcc > 2:7042348/1‑93 (MQ=255)
gccgccTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCg < 1:8565746/93‑1 (MQ=255)
gccTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGtt > 2:2237346/1‑93 (MQ=255)
ccTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTa > 2:4310162/1‑93 (MQ=255)
ccTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTa < 2:9232484/93‑1 (MQ=255)
cTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTAt < 1:5528054/93‑1 (MQ=255)
cTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTAt < 2:8429911/93‑1 (MQ=255)
cTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTAt > 2:19914/1‑93 (MQ=255)
ttGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATc > 1:867627/1‑93 (MQ=255)
ttGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATc > 2:10035764/1‑93 (MQ=255)
ttGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATc > 2:5579108/1‑93 (MQ=255)
ttGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATc < 2:6361527/93‑1 (MQ=255)
ttttATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCAt < 1:808435/93‑1 (MQ=255)
ttttATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCAt < 1:3017557/93‑1 (MQ=255)
aTGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATgcag > 2:9678823/1‑93 (MQ=255)
gAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATgcagca < 2:3439167/93‑1 (MQ=255)
gAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATgcagca < 1:5882969/93‑1 (MQ=255)
gAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATgcagca < 1:5511000/93‑1 (MQ=255)
gAAGGCGATGGAAGAAGCGATGATCAAGGGGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATgcagca > 1:7088755/1‑93 (MQ=255)
aaGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCaa < 2:1699961/93‑1 (MQ=255)
ggCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAAt > 2:283208/1‑93 (MQ=255)
cGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATcc < 2:2074820/93‑1 (MQ=255)
gATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCt > 2:6263261/1‑93 (MQ=255)
gATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCt > 2:2702317/1‑93 (MQ=255)
aTGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTg < 2:7840413/93‑1 (MQ=255)
aTGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTg > 1:2885605/1‑93 (MQ=255)
tGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGt > 2:7873133/1‑93 (MQ=255)
tGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGt > 2:5955568/1‑93 (MQ=255)
ggAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTc > 1:938154/1‑93 (MQ=255)
ggAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTc < 2:1896458/93‑1 (MQ=255)
ggAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTc < 1:4579428/93‑1 (MQ=255)
agaagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCa > 1:4337947/1‑93 (MQ=255)
agaagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCa < 2:3076396/93‑1 (MQ=255)
gaagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAg > 2:1464741/1‑93 (MQ=255)
gaagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAg > 2:8777009/1‑93 (MQ=255)
gaagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAg > 1:3522684/1‑93 (MQ=255)
aagCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGc > 1:343529/1‑93 (MQ=255)
gCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCg > 1:1431429/1‑93 (MQ=255)
gCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCg > 1:9135215/1‑93 (MQ=255)
tgatCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATc > 2:6828769/1‑93 (MQ=255)
tgatCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATc > 1:6784937/1‑93 (MQ=255)
gatCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCg < 2:9549684/93‑1 (MQ=255)
gatCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCg > 1:2350303/1‑93 (MQ=255)
atCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGc > 1:723134/1‑93 (MQ=255)
atCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGc > 2:4801100/1‑93 (MQ=255)
tCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCTCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGcc < 2:9896336/93‑1 (MQ=255)
tCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGcc > 2:8547661/1‑93 (MQ=255)
tCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGcc < 1:7801497/93‑1 (MQ=255)
tCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGcc > 2:7699141/1‑93 (MQ=255)
cAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGccc < 2:8390449/93‑1 (MQ=255)
aGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTa > 1:5994286/1‑93 (MQ=255)
gTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACt < 1:3810694/93‑1 (MQ=255)
gCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGc < 2:6946593/93‑1 (MQ=255)
gCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGc > 1:322113/1‑93 (MQ=255)
cGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCg < 1:8630188/93‑1 (MQ=255)
ggAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGt > 2:7869899/1‑93 (MQ=255)
aaaGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGtct < 2:829447/93‑1 (MQ=255)
aaGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGtctt > 1:1211687/1‑93 (MQ=255)
aGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGtcttc < 2:6301097/93‑1 (MQ=255)
aGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGtcttc < 2:7459763/93‑1 (MQ=255)
gCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGtcttct > 2:6655545/1‑93 (MQ=255)
cTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtg > 2:9518843/1‑93 (MQ=255)
tGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgt < 2:6109320/93‑1 (MQ=255)
tGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgt > 1:4319398/1‑93 (MQ=255)
tGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgt > 1:2850081/1‑93 (MQ=255)
ggATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgtg < 2:5278125/93‑1 (MQ=255)
ggATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgtg > 2:230782/1‑93 (MQ=255)
ggATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCtgtg > 2:1874889/1‑93 (MQ=255)
gATTGTGCGGGGTGACTTTGAACCTGAATCCGTTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTgtgg > 1:8967961/1‑93 (MQ=255)
gATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTgtgg < 1:7655277/93‑1 (MQ=255)
gATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTgtgg < 1:10035765/93‑1 (MQ=255)
gATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTgtgg < 1:6778386/93‑1 (MQ=255)
aTTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTgtggt < 2:3709186/93‑1 (MQ=255)
tgtgCGGGGTGGCTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGtggtgg < 1:2479841/93‑1 (MQ=255)
|
TGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCG > NC_000913/1736430‑1736609
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATAT > NC_000913/1736427‑1736613
|
CGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGACGCGATGATCAAGGGGCCGGAAAGCTGGATTGTGCG > SRR4302540.2326651/1‑94 (MQ=60)
CGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCG > SRR4302540.2326650/1‑94 (MQ=60)
CCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGG < SRR4302540.7195347/94‑1 (MQ=60)
CTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGG > SRR4302540.4177670/1‑94 (MQ=60)
CTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGG > SRR4302540.7393782/1‑94 (MQ=60)
TGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGG > SRR4302540.8013523/1‑94 (MQ=60)
GAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTG < SRR4302540.9403912/94‑1 (MQ=60)
ACGTAACACCGGCGCAGGCCGCCTTGCGGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGAC < SRR4302540.4197918/94‑1 (MQ=60)
ACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGAC < SRR4302540.9335786/94‑1 (MQ=60)
TAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTT > SRR4302540.2213637/1‑94 (MQ=60)
AACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTG < SRR4302540.6388370/94‑1 (MQ=60)
CACCGGCGCAGGCCGCCTTGCCGGGTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAA > SRR4302540.1170506/1‑94 (MQ=60)
CGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCT > SRR4302540.4107165/1‑94 (MQ=60)
GGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTG < SRR4302540.4864662/94‑1 (MQ=60)
GGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTG > SRR4302540.3527612/1‑94 (MQ=60)
CGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAA < SRR4302540.1634857/94‑1 (MQ=60)
CGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAA < SRR4302540.1634855/94‑1 (MQ=60)
CGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAA < SRR4302540.2930353/94‑1 (MQ=60)
CGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAA < SRR4302540.977833/94‑1 (MQ=60)
CAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATC > SRR4302540.95272/1‑94 (MQ=60)
CAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATC < SRR4302540.6056185/94‑1 (MQ=60)
AGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCC < SRR4302540.1223468/94‑1 (MQ=60)
GGCCGCCTTTCCGGTTTTATGAAAGCGAGGGAAGAAACGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCG < SRR4302540.6954309/94‑1 (MQ=60)
GGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCG < SRR4302540.4180975/94‑1 (MQ=60)
GCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGG < SRR4302540.8665219/94‑1 (MQ=60)
CGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTT < SRR4302540.139942/94‑1 (MQ=60)
CCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTAT > SRR4302540.466771/1‑94 (MQ=60)
CTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATC > SRR4302540.876832/1‑94 (MQ=60)
CTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATC < SRR4302540.5588936/94‑1 (MQ=60)
CTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATC > SRR4302540.2477918/1‑94 (MQ=60)
TTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCG < SRR4302540.4078970/94‑1 (MQ=60)
TGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGC > SRR4302540.3184788/1‑94 (MQ=60)
CGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAATGCTGGATTGTGCGGGGTGACTTTGAAACTGAATCCGGTTATCGCGCC > SRR4302540.5069673/1‑94 (MQ=60)
CGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCC > SRR4302540.9845997/1‑94 (MQ=60)
CGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCC > SRR4302540.9659745/1‑94 (MQ=60)
CGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCC > SRR4302540.3392990/1‑94 (MQ=60)
TTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATG < SRR4302540.3050727/94‑1 (MQ=60)
TTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATG < SRR4302540.817026/94‑1 (MQ=60)
TGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCA < SRR4302540.8688704/94‑1 (MQ=60)
TGAAGGCGATGGAAGAAGCGATGATCAAGGGGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCA > SRR4302540.7167637/1‑94 (MQ=60)
GAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAA < SRR4302540.5947979/94‑1 (MQ=60)
GAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAA < SRR4302540.5571698/94‑1 (MQ=60)
GGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATC < SRR4302540.2352939/94‑1 (MQ=60)
GCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCC < SRR4302540.6704035/94‑1 (MQ=60)
GATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTG > SRR4302540.2917019/1‑94 (MQ=60)
ATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGT > SRR4302540.5050348/1‑94 (MQ=60)
TGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTC > SRR4302540.947975/1‑94 (MQ=60)
TGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTC < SRR4302540.8216316/94‑1 (MQ=60)
GGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCG < SRR4302540.4628805/94‑1 (MQ=60)
AAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCA > SRR4302540.4385175/1‑94 (MQ=60)
AGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAG > SRR4302540.3561086/1‑94 (MQ=60)
GAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGC > SRR4302540.347020/1‑94 (MQ=60)
GAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGC < SRR4302540.6996363/94‑1 (MQ=60)
AAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCC > SRR4302540.4445760/1‑94 (MQ=60)
AGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCG > SRR4302540.1446940/1‑94 (MQ=60)
AGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCG > SRR4302540.9244994/1‑94 (MQ=60)
ATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATC > SRR4302540.6859965/1‑94 (MQ=60)
ATGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATC > SRR4302540.6859962/1‑94 (MQ=60)
TGATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCG > SRR4302540.2375612/1‑94 (MQ=60)
GATCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGC > SRR4302540.730884/1‑94 (MQ=60)
TCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCC < SRR4302540.7892679/94‑1 (MQ=60)
TCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCC < SRR4302540.9289852/94‑1 (MQ=60)
GCAAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCC < SRR4302540.1502575/94‑1 (MQ=60)
AAGGTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTA > SRR4302540.6060699/1‑94 (MQ=60)
GTGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTG < SRR4302540.3852190/94‑1 (MQ=60)
TGCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGC > SRR4302540.325332/1‑94 (MQ=60)
GCCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCC < SRR4302540.9213335/94‑1 (MQ=60)
CCGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCG > SRR4302540.2630436/1‑94 (MQ=60)
CGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGT < SRR4302540.8730430/94‑1 (MQ=60)
CGGAAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGT > SRR4302540.1970297/1‑94 (MQ=60)
AAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTT > SRR4302540.400677/1‑94 (MQ=60)
AAAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTT > SRR4302540.1224109/1‑94 (MQ=60)
AAGCTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTC > SRR4302540.6376759/1‑94 (MQ=60)
CTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGT > SRR4302540.2880956/1‑94 (MQ=60)
CTGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGT > SRR4302540.4366418/1‑94 (MQ=60)
TGGATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTG > SRR4302540.7264371/1‑94 (MQ=60)
GGATTGTGCGGGGTGACTTTGAACCTGAATCCGTTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGG > SRR4302540.9074314/1‑94 (MQ=60)
GATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGT < SRR4302540.7741462/94‑1 (MQ=60)
GATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGT < SRR4302540.10152482/94‑1 (MQ=60)
GATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGT < SRR4302540.6853314/94‑1 (MQ=60)
ATTGTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCCCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTG > SRR4302540.8767930/1‑94 (MQ=60)
TGTGCGGGGTGGCTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGC < SRR4302540.2506548/94‑1 (MQ=60)
GTGCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCG > SRR4302540.5798288/1‑94 (MQ=60)
GCGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGAT < SRR4302540.8431362/94‑1 (MQ=60)
CGGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATA > SRR4302540.3237084/1‑94 (MQ=60)
GGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATAT > SRR4302540.9172327/1‑94 (MQ=60)
GGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGACCTACTGCCGTCTTCTGTGGTGGCGATAT > SRR4302540.9172325/1‑94 (MQ=60)
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CGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATAT > NC_000913/1736427‑1736613
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
