Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,789,986	T→C	D20G (GAC→GGC)	b1707 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,789,986	0	T	C	99.4%	1060.8 / NA	329	D20G (GAC→GGC)	b1707	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (133/194); minor base A (2/0); total (135/194)
Fisher's exact test for biased strand distribution p-value = 1.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA  >  NC_000913/1789896‑1790075

gcTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGcct                                                                                         <  2:8006607/93‑1 (MQ=255)

  tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct                                                                                       >  2:4477514/1‑93 (MQ=255)

  tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct                                                                                       <  2:8994481/93‑1 (MQ=255)

    taACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTa                                                                                     <  1:10006494/93‑1 (MQ=255)

    taACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTa                                                                                     <  2:7604184/93‑1 (MQ=255)

    taACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTa                                                                                     <  1:2158708/93‑1 (MQ=255)

     aaCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAt                                                                                    <  2:6480645/93‑1 (MQ=255)

     aaCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAt                                                                                    <  1:4620656/93‑1 (MQ=255)

      aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc                                                                                   <  2:3222909/93‑1 (MQ=255)

      aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc                                                                                   <  1:4249615/93‑1 (MQ=255)

      aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc                                                                                   <  1:1773403/93‑1 (MQ=255)

      aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc                                                                                   <  1:2622952/93‑1 (MQ=255)

      aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGGTGCCTCTTATc                                                                                   >  2:4527279/1‑93 (MQ=255)

       cccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCg                                                                                  <  1:5273592/93‑1 (MQ=255)

       cccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCg                                                                                  <  2:5175749/93‑1 (MQ=255)

        ccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCgg                                                                                 >  2:5805692/1‑93 (MQ=255)

        ccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCgg                                                                                 >  1:3385677/1‑93 (MQ=255)

         cGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGc                                                                                <  2:3889066/93‑1 (MQ=255)

          gACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCa                                                                               >  2:6662936/1‑93 (MQ=255)

           gcTCGTCGGTATGCGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGTACTTGCTGGTTGCCTCTTATCGGCAg                                                                              <  2:1609432/92‑1 (MQ=255)

             tcgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGa                                                                            <  2:766136/93‑1 (MQ=255)

             tcgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGa                                                                            >  1:9180861/1‑93 (MQ=255)

             tcgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGa                                                                            <  2:1863208/93‑1 (MQ=255)

              cgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGaa                                                                           <  1:8297865/93‑1 (MQ=255)

                tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt                                                                         <  2:1432244/93‑1 (MQ=255)

                tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt                                                                         <  1:8101239/93‑1 (MQ=255)

                tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt                                                                         >  2:6239612/1‑93 (MQ=255)

                tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt                                                                         <  1:7533126/93‑1 (MQ=255)

                   ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGTTATAGc                                                                      >  2:9250189/1‑93 (MQ=255)

                   ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGc                                                                      <  2:5041043/93‑1 (MQ=255)

                    gATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCa                                                                     <  2:8275651/93‑1 (MQ=255)

                     aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa                                                                    <  2:6793722/93‑1 (MQ=255)

                     aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa                                                                    >  1:6513746/1‑93 (MQ=255)

                     aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa                                                                    >  1:3578193/1‑93 (MQ=255)

                      tACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAt                                                                   >  1:6299733/1‑93 (MQ=255)

                         gAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAg                                                                <  1:6773352/93‑1 (MQ=255)

                          aaCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGa                                                               <  2:5300976/93‑1 (MQ=255)

                          aaCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGa                                                               >  2:9191989/1‑93 (MQ=255)

                           aCCGTGCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGaa                                                              <  1:5446743/93‑1 (MQ=255)

                           aCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGaa                                                              >  1:9550639/1‑93 (MQ=255)

                              gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa                                                           <  1:2046705/93‑1 (MQ=255)

                              gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa                                                           >  1:1154576/1‑93 (MQ=255)

                              gTACCATCGTCACTGGAGAAATGGGTGATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa                                                           <  1:3304808/93‑1 (MQ=255)

                               tACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAt                                                          >  2:6014525/1‑93 (MQ=255)

                                 ccATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaa                                                        >  1:1903591/1‑93 (MQ=255)

                                   ctCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAg                                                      <  2:2671848/92‑1 (MQ=255)

                                   aTCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGTATGATAAAg                                                      >  1:2311938/1‑93 (MQ=255)

                                    tCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGa                                                     >  1:1046163/1‑93 (MQ=255)

                                     cTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAt                                                    <  2:314875/93‑1 (MQ=255)

                                       tCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATtc                                                  >  1:7917318/1‑93 (MQ=255)

                                         aCTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATtctc                                                <  1:9407325/93‑1 (MQ=255)

                                          cTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTcc                                               >  1:6996445/1‑93 (MQ=255)

                                            ggAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaa                                             >  2:5551312/1‑93 (MQ=255)

                                            ggAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaa                                             >  2:4355700/1‑93 (MQ=255)

                                             gagaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaa                                            <  1:2850047/93‑1 (MQ=255)

                                             gagaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaa                                            >  2:3585506/1‑93 (MQ=255)

                                               gaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCagaaa                                          <  1:4103961/93‑1 (MQ=255)

                                               gaAATGGGTAATTAACTCAACACCGACAAGGACTTGCTGGTTGCATCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaa                                          <  2:1706604/93‑1 (MQ=255)

                                                 aaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATACAGATTCTCCaaaaaaa                                        <  2:9556253/93‑1 (MQ=255)

                                                 aaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaaaa                                        <  1:8575192/93‑1 (MQ=255)

                                                   tGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATc                                      >  1:9242416/1‑93 (MQ=255)

                                                   tGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATc                                      <  2:1761934/93‑1 (MQ=255)

                                                      gTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTc                                   >  1:9045179/1‑93 (MQ=255)

                                                       tAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCa                                  <  2:2446802/93‑1 (MQ=255)

                                                        aaTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAt                                 <  2:7220188/93‑1 (MQ=255)

                                                         aTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATg                                <  1:7755053/93‑1 (MQ=255)

                                                           tAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGt                              <  2:3527247/93‑1 (MQ=255)

                                                           tAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGt                              >  2:4036525/1‑93 (MQ=255)

                                                            aaCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTa                             <  2:5853673/93‑1 (MQ=255)

                                                             aCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGCATGATAAAGATTCTCCAAAAAAATCTTCATGGTaa                            >  2:234908/1‑93 (MQ=255)

                                                             aCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTaa                            >  2:8823608/1‑93 (MQ=255)

                                                              cTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAc                           <  1:5606639/93‑1 (MQ=255)

                                                               tCAACGACGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAcc                          >  1:9842450/1‑93 (MQ=255)

                                                                  aCGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTc                       <  1:4025612/93‑1 (MQ=255)

                                                                   cGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTcc                      <  1:720676/93‑1 (MQ=255)

                                                                    gCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTccc                     >  2:2283786/1‑93 (MQ=255)

                                                                     ccGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGTTAAAGATTCTCCAAAAAAATCTTCATGGGAACCGTCCct                    <  2:7044444/93‑1 (MQ=255)

                                                                     ccGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCct                    <  2:4282465/93‑1 (MQ=255)

                                                                      cGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctc                   <  1:4792430/93‑1 (MQ=255)

                                                                      cGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTCCATGGTAACCGTCCctc                   >  1:8966763/1‑93 (MQ=255)

                                                                       gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct                  >  2:7512904/1‑93 (MQ=255)

                                                                         cAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCg                >  1:8707992/1‑93 (MQ=255)

                                                                         cAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCg                >  2:310601/1‑93 (MQ=255)

                                                                          aaGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGa               <  1:5084787/93‑1 (MQ=255)

                                                                          aaGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGa               >  2:1244465/1‑93 (MQ=255)

                                                                          aaGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGa               >  1:6153608/1‑93 (MQ=255)

                                                                          aaGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGa               <  2:9464258/93‑1 (MQ=255)

                                                                           aGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGaa              <  1:4979713/93‑1 (MQ=255)

                                                                           aGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGaa              >  2:2854872/1‑93 (MQ=255)

                                                                               cTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAt          <  1:6876110/93‑1 (MQ=255)

                                                                               cTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAt          <  1:1710014/93‑1 (MQ=255)

                                                                                 tGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGt        >  1:7361780/1‑93 (MQ=255)

                                                                                  gCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtt       <  2:4170214/93‑1 (MQ=255)

                                                                                  gCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtt       <  2:9307057/93‑1 (MQ=255)

                                                                                    tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt     >  2:4667987/1‑93 (MQ=255)

                                                                                    tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt     <  2:1527826/93‑1 (MQ=255)

                                                                                      gTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTc   >  2:4862657/1‑93 (MQ=255)

                                                                                      gTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTc   <  1:9952322/93‑1 (MQ=255)

                                                                                      gTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTc   <  2:2098355/93‑1 (MQ=255)

                                                                                       ttGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCa  <  1:3021356/93‑1 (MQ=255)

GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA  >  NC_000913/1789896‑1790075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT  >  NC_000913/1789894‑1790079

GCGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCC                                                                                                <  SRR4302540.9433800/94‑1 (MQ=60)

  GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTC                                                                                              <  SRR4302540.10065407/94‑1 (MQ=60)

  GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTC                                                                                              >  SRR4302540.1013169/1‑94 (MQ=60)

      TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT                                                                                          <  SRR4302540.2181953/94‑1 (MQ=60)

      TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT                                                                                          <  SRR4302540.10123034/94‑1 (MQ=60)

      TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT                                                                                          <  SRR4302540.2225573/94‑1 (MQ=60)

      AAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT                                                                                          <  SRR4302540.7869335/94‑1 (MQ=60)

       AACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATC                                                                                         <  SRR4302540.4670190/94‑1 (MQ=60)

       AACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATC                                                                                         <  SRR4302540.3558325/94‑1 (MQ=60)

        NNNCGACNCGTCGGGATNCGNNCNGTACCATCTTCACTGGAGAAATGNGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG                                                                                        <  SRR4302540.8635829/94‑1 (MQ=60)

        ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG                                                                                        <  SRR4302540.4295850/94‑1 (MQ=60)

        ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG                                                                                        <  SRR4302540.2651314/94‑1 (MQ=60)

        ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG                                                                                        <  SRR4302540.1792651/94‑1 (MQ=60)

        ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG                                                                                        <  SRR4302540.1792650/94‑1 (MQ=60)

         CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG                                                                                       >  SRR4302540.9974863/1‑94 (MQ=60)

         CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG                                                                                       >  SRR4302540.3422627/1‑94 (MQ=60)

         CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG                                                                                       <  SRR4302540.5331161/94‑1 (MQ=60)

           CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGAGAAGGACTTGCTGGTTGCCTCTTATCGGCA                                                                                     >  SRR4302540.6034165/1‑94 (MQ=60)

           CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCG                                                                                     >  SRR4302540.7839847/1‑94 (MQ=60)

           CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCA                                                                                     <  SRR4302540.7423950/94‑1 (MQ=60)

            GACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAG                                                                                    >  SRR4302540.805514/1‑94 (MQ=60)

            GACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAG                                                                                    >  SRR4302540.8248307/1‑94 (MQ=60)

            GACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAG                                                                                    >  SRR4302540.1664632/1‑94 (MQ=60)

            GACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAG                                                                                    <  SRR4302540.6392587/94‑1 (MQ=60)

            GACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAG                                                                                    <  SRR4302540.6392586/94‑1 (MQ=60)

              CTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGA                                                                                  <  SRR4302540.3378948/94‑1 (MQ=60)

              CTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGA                                                                                  >  SRR4302540.9290973/1‑94 (MQ=60)

                CGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAA                                                                                <  SRR4302540.8394214/94‑1 (MQ=60)

                CGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAA                                                                                <  SRR4302540.4531847/94‑1 (MQ=60)

                 GTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAT                                                                               <  SRR4302540.6070207/94‑1 (MQ=60)

                 GTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAT                                                                               <  SRR4302540.6070208/94‑1 (MQ=60)

                 GTCGGGATAAGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAT                                                                               >  SRR4302540.329833/1‑94 (MQ=60)

                  TCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATA                                                                              <  SRR4302540.7617482/94‑1 (MQ=60)

                  TCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATA                                                                              <  SRR4302540.8195263/94‑1 (MQ=60)

                   CGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAG                                                                             <  SRR4302540.4324755/94‑1 (MQ=60)

                    GGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGTACTTGCTGGTTGACTCTTATCGGCAGGAAATAGC                                                                            >  SRR4302540.2941512/1‑94 (MQ=60)

                    GGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGC                                                                            >  SRR4302540.9733393/1‑94 (MQ=60)

                    GGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGC                                                                            >  SRR4302540.2941511/1‑94 (MQ=60)

                      GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAGCGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA                                                                          <  SRR4302540.2687025/94‑1 (MQ=60)

                      GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA                                                                          >  SRR4302540.6863815/1‑94 (MQ=60)

                      GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA                                                                          <  SRR4302540.4120452/94‑1 (MQ=60)

                      GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA                                                                          >  SRR4302540.6586109/1‑94 (MQ=60)

                      GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA                                                                          >  SRR4302540.3617275/1‑94 (MQ=60)

                       ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGaaaa                                                                         >  SRR4302540.4760409/1‑90 (MQ=60)

                       ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAT                                                                         >  SRR4302540.6369888/1‑94 (MQ=60)

                       ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAT                                                                         >  SRR4302540.1009177/1‑94 (MQ=60)

                         ACGAACCGTACCATCTTCACTGAAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCA                                                                       <  SRR4302540.3374374/94‑1 (MQ=60)

                          CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG                                                                      <  SRR4302540.383013/94‑1 (MQ=60)

                          CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG                                                                      <  SRR4302540.5276296/94‑1 (MQ=60)

                          CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG                                                                      <  SRR4302540.6716743/94‑1 (MQ=60)

                          CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG                                                                      <  SRR4302540.5276297/94‑1 (MQ=60)

                          CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG                                                                      <  SRR4302540.8418900/94‑1 (MQ=60)

                           GAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGA                                                                     <  SRR4302540.6848212/94‑1 (MQ=60)

                           GAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATACCAATCAGA                                                                     >  SRR4302540.5145319/1‑94 (MQ=60)

                            AACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAA                                                                    >  SRR4302540.9663612/1‑94 (MQ=60)

                            AACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAA                                                                    <  SRR4302540.112748/94‑1 (MQ=60)

                             ACCGTGCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT                                                                   <  SRR4302540.5506681/94‑1 (MQ=60)

                             ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT                                                                   <  SRR4302540.7910582/94‑1 (MQ=60)

                             ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT                                                                   <  SRR4302540.5506682/94‑1 (MQ=60)

                             ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT                                                                   <  SRR4302540.3233122/94‑1 (MQ=60)

                             ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT                                                                   >  SRR4302540.3639637/1‑94 (MQ=60)

                              CCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATG                                                                  >  SRR4302540.2091332/1‑94 (MQ=60)

                               CGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGA                                                                 <  SRR4302540.2675092/94‑1 (MQ=60)

                               CGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGA                                                                 <  SRR4302540.9275933/94‑1 (MQ=60)

                               CGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGA                                                                 >  SRR4302540.1166591/1‑94 (MQ=60)

                                GTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT                                                                >  SRR4302540.1975175/1‑94 (MQ=60)

                                GTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT                                                                >  SRR4302540.2010590/1‑94 (MQ=60)

                                GTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT                                                                <  SRR4302540.2068756/94‑1 (MQ=60)

                                GTACCATCGTCACTGGAGAAATGGGTGATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT                                                                <  SRR4302540.3340990/94‑1 (MQ=60)

                                 TACCATCTTCACTGGAGTAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA                                                               <  SRR4302540.9091731/94‑1 (MQ=60)

                                 TACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA                                                               <  SRR4302540.9428844/94‑1 (MQ=60)

                                 TACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA                                                               <  SRR4302540.10023275/94‑1 (MQ=60)

                                  ACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAA                                                              >  SRR4302540.1924401/1‑94 (MQ=60)

                                   CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAGGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA                                                             <  SRR4302540.1900241/94‑1 (MQ=60)

                                   CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA                                                             >  SRR4302540.7876588/1‑94 (MQ=60)

                                   CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA                                                             >  SRR4302540.1911665/1‑94 (MQ=60)

                                   CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA                                                             >  SRR4302540.723799/1‑94 (MQ=60)

                                   CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA                                                             >  SRR4302540.8792610/1‑94 (MQ=60)

                                    CATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGTATGATAAAG                                                            >  SRR4302540.2336820/1‑94 (MQ=60)

                                    CATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAG                                                            <  SRR4302540.8959815/94‑1 (MQ=60)

                                     ATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGA                                                           >  SRR4302540.1056797/1‑94 (MQ=60)

                                      ttttctgcGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAT                                                          <  SRR4302540.1799558/86‑1 (MQ=60)

                                      TCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAT                                                          <  SRR4302540.9156520/94‑1 (MQ=60)

                                       CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT                                                         >  SRR4302540.9464899/1‑94 (MQ=60)

                                        TTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTC                                                        >  SRR4302540.8009611/1‑94 (MQ=60)

                                         TCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCT                                                       <  SRR4302540.6911984/94‑1 (MQ=60)

                                         TCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAGCGGCAGGAAATAGCAATCAGAATGATAAAGATTCT                                                       <  SRR4302540.2212481/94‑1 (MQ=60)

                                          CACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC                                                      >  SRR4302540.3464633/1‑94 (MQ=60)

                                          CACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC                                                      <  SRR4302540.7023138/94‑1 (MQ=60)

                                           ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑C                                                   <  SRR4302540.9519202/94‑1 (MQ=60)

                                           ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑C                                                   >  SRR4302540.7074098/1‑94 (MQ=60)

                                           ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑C                                                   >  SRR4302540.4654545/1‑94 (MQ=60)

                                            CTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CA                                                  <  SRR4302540.910772/94‑1 (MQ=60)

                                             TGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAA                                                 <  SRR4302540.2699286/94‑1 (MQ=60)

                                             TGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAA                                                 <  SRR4302540.4201429/94‑1 (MQ=60)

                                               GAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAA                                               <  SRR4302540.2880921/94‑1 (MQ=60)

                                                 GAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAGAAAA                                             <  SRR4302540.4148235/94‑1 (MQ=60)

                                                 GAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAGAAAA                                             <  SRR4302540.4147898/94‑1 (MQ=60)

                                                 GAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAA                                             >  SRR4302540.2574800/1‑94 (MQ=60)

                                                 GAAAATGGTAATTAACTCAACGCCGACCAGGACTTTCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAA                                             <  SRR4302540.3479616/94‑1 (MQ=60)

                                                   AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAAT                                           <  SRR4302540.8674832/94‑1 (MQ=60)

                                                    ATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATC                                          >  SRR4302540.9353112/1‑94 (MQ=60)

                                                      GGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTT                                        <  SRR4302540.8680061/94‑1 (MQ=60)

                                                       GGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTC                                       <  SRR4302540.5653045/94‑1 (MQ=60)

                                                       GGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTC                                       <  SRR4302540.4822638/94‑1 (MQ=60)

                                                       GGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTC                                       >  SRR4302540.9153755/1‑94 (MQ=60)

                                                         TAATTACCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCAT                                     <  SRR4302540.9531433/94‑1 (MQ=60)

                                                         TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCAT                                     <  SRR4302540.6324330/94‑1 (MQ=60)

                                                         TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCAT                                     <  SRR4302540.3058220/94‑1 (MQ=60)

                                                         TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCAT                                     <  SRR4302540.6324329/94‑1 (MQ=60)

                                                         TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCAT                                     <  SRR4302540.4945628/94‑1 (MQ=60)

                                                          AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATG                                    <  SRR4302540.3872456/94‑1 (MQ=60)

                                                          AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATG                                    <  SRR4302540.9047867/94‑1 (MQ=60)

                                                          AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATG                                    <  SRR4302540.7054578/94‑1 (MQ=60)

                                                          AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATG                                    >  SRR4302540.8249334/1‑94 (MQ=60)

                                                           ATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGG                                   <  SRR4302540.7845624/94‑1 (MQ=60)

                                                             TAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTA                                 <  SRR4302540.1399528/94‑1 (MQ=60)

                                                             TAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTA                                 <  SRR4302540.954520/94‑1 (MQ=60)

                                                             TAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTA                                 <  SRR4302540.4202373/94‑1 (MQ=60)

                                                              AACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAA                                >  SRR4302540.1895230/1‑94 (MQ=60)

                                                               ACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAAC                               <  SRR4302540.8226215/94‑1 (MQ=60)

                                                                CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACC                              >  SRR4302540.914412/1‑94 (MQ=60)

                                                                CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACC                              <  SRR4302540.5668331/94‑1 (MQ=60)

                                                                CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACC                              <  SRR4302540.8968718/94‑1 (MQ=60)

                                                                CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACC                              <  SRR4302540.511452/94‑1 (MQ=60)

                                                                CTCAACGACGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACC                              >  SRR4302540.9957510/1‑94 (MQ=60)

                                                                  CAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGGAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGT                            >  SRR4302540.7324242/1‑94 (MQ=60)

                                                                  CAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGT                            >  SRR4302540.7324241/1‑94 (MQ=60)

                                                                  CAACGCCGACAAGGACTTGCGGGTTTCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCACAAAAAAATCTTCATGGTAACC                              <  SRR4302540.5915160/94‑1 (MQ=60)

                                                                    ACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCC                          <  SRR4302540.4069017/94‑1 (MQ=60)

                                                                    ACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCC                          >  SRR4302540.968730/1‑94 (MQ=60)

                                                                     CGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCC                         <  SRR4302540.728403/94‑1 (MQ=60)

                                                                      GCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCT                        <  SRR4302540.5136698/94‑1 (MQ=60)

                                                                      GCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCT                        >  SRR4302540.2084660/1‑94 (MQ=60)

                                                                       CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTC                       >  SRR4302540.9324234/1‑94 (MQ=60)

                                                                       CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTC                       <  SRR4302540.5430923/94‑1 (MQ=60)

                                                                       CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTCCATGGTAACCGTCCCTC                       >  SRR4302540.9073055/1‑94 (MQ=60)

                                                                        CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCT                      >  SRR4302540.1472825/1‑94 (MQ=60)

                                                                        CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCT                      <  SRR4302540.4843686/94‑1 (MQ=60)

                                                                        CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCT                      <  SRR4302540.1081372/94‑1 (MQ=60)

                                                                        CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCT                      <  SRR4302540.4843685/94‑1 (MQ=60)

                                                                         GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTTCCTCTC                     >  SRR4302540.7555956/1‑94 (MQ=60)

                                                                         GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTC                     >  SRR4302540.9320873/1‑94 (MQ=60)

                                                                         GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTC                     >  SRR4302540.7555957/1‑94 (MQ=60)

                                                                         GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTC                     <  SRR4302540.648706/94‑1 (MQ=60)

                                                                          ACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCG                    >  SRR4302540.8809072/1‑94 (MQ=60)

                                                                          ACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCG                    <  SRR4302540.2307386/94‑1 (MQ=60)

                                                                           CAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGA                   >  SRR4302540.8118018/1‑94 (MQ=60)

                                                                           CAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGA                   >  SRR4302540.6222154/1‑94 (MQ=60)

                                                                            AAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAA                  >  SRR4302540.9434068/1‑94 (MQ=60)

                                                                            AAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAA                  <  SRR4302540.5139759/94‑1 (MQ=60)

                                                                            AAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAA                  >  SRR4302540.7112052/1‑94 (MQ=60)

                                                                             AGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG                 <  SRR4302540.5033617/94‑1 (MQ=60)

                                                                             AGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG                 >  SRR4302540.248387/1‑94 (MQ=60)

                                                                              GGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGG                >  SRR4302540.5341547/1‑94 (MQ=60)

                                                                               GACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGA               <  SRR4302540.7655919/94‑1 (MQ=60)

                                                                                ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT              >  SRR4302540.4880481/1‑94 (MQ=60)

                                                                                 CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG             >  SRR4302540.7311431/1‑94 (MQ=60)

                                                                                 CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG             <  SRR4302540.1728815/94‑1 (MQ=60)

                                                                                 CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG             <  SRR4302540.6952319/94‑1 (MQ=60)

                                                                                 CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG             <  SRR4302540.1728488/94‑1 (MQ=60)

                                                                                  TTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGT            >  SRR4302540.7443868/1‑94 (MQ=60)

                                                                                       GGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTC       >  SRR4302540.8616716/1‑94 (MQ=60)

                                                                                       GGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTC       <  SRR4302540.7073040/94‑1 (MQ=60)

                                                                                       GGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTC       >  SRR4302540.6788045/1‑94 (MQ=60)

                                                                                        GTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA      <  SRR4302540.10068501/94‑1 (MQ=60)

                                                                                        GTTGACTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA      <  SRR4302540.3345506/94‑1 (MQ=60)

                                                                                         TTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAG     <  SRR4302540.3054563/94‑1 (MQ=60)

                                                                                          TGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGT    <  SRR4302540.6165055/94‑1 (MQ=60)

                                                                                           GCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTA   <  SRR4302540.110685/94‑1 (MQ=60)

                                                                                            CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT  >  SRR4302540.9434873/1‑94 (MQ=60)

                                                                                            CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT  >  SRR4302540.9798524/1‑94 (MQ=60)

GCGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC‑‑CAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT  >  NC_000913/1789894‑1790079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`