Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,789,986 |
T→C |
D20G (GAC→GGC) |
b1707 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,789,986 | 0 | T | C | 100.0%
| 577.6
/ NA
| 180 | D20G (GAC→GGC) | b1707 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (77/103); total (77/103) |
Only 100 of 186 total aligned reads displayed.
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA > NC_000913/1789896‑1790075
|
cTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGcctc > 1:4199911/1‑93 (MQ=255)
cTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGcctc < 1:3530255/93‑1 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct > 2:2906881/1‑93 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct > 2:229576/1‑93 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct > 1:2056477/1‑93 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct > 1:536121/1‑93 (MQ=255)
ataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCtt > 2:470958/1‑93 (MQ=255)
ataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCtt < 2:1127294/93‑1 (MQ=255)
taACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTa < 2:1009860/93‑1 (MQ=255)
aaCCCGACTCGTCGGGATACGCACCGCACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGCCTTCCTGGTTGCCTCTTAt > 1:1806110/1‑93 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc < 2:652664/93‑1 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc > 2:4973952/1‑93 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc < 2:1773509/93‑1 (MQ=255)
cccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCg < 1:2050879/93‑1 (MQ=255)
ccGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCgg < 1:2044922/93‑1 (MQ=255)
cGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGc < 2:424015/93‑1 (MQ=255)
gACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCa > 1:4769785/1‑93 (MQ=255)
gACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCa > 1:4376442/1‑93 (MQ=255)
gACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCa > 2:5128126/1‑93 (MQ=255)
aCTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAg > 2:5469383/1‑93 (MQ=255)
cTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAgg < 2:4618194/93‑1 (MQ=255)
cgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGaa < 2:5982494/93‑1 (MQ=255)
gtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGaaa < 1:1649175/93‑1 (MQ=255)
tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt < 1:2759298/93‑1 (MQ=255)
tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt < 2:4548045/93‑1 (MQ=255)
gggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAg > 2:2830418/1‑93 (MQ=255)
ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAga > 2:1058816/1‑92 (MQ=255)
ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGc > 2:551429/1‑93 (MQ=255)
gATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCa > 2:2953533/1‑93 (MQ=255)
aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa < 1:3421838/93‑1 (MQ=255)
aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa > 2:4800511/1‑93 (MQ=255)
tACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAt < 2:6174515/93‑1 (MQ=255)
tACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAt > 2:2538129/1‑93 (MQ=255)
aCGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATc < 1:6079412/93‑1 (MQ=255)
cGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCa < 2:3696925/93‑1 (MQ=255)
gAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAg < 1:5552276/93‑1 (MQ=255)
aaCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGa < 2:3080597/93‑1 (MQ=255)
aaCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGa > 2:2076963/1‑93 (MQ=255)
aCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGaa < 2:2656178/93‑1 (MQ=255)
cGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATg < 1:2202412/93‑1 (MQ=255)
aCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATa > 2:4280115/1‑93 (MQ=255)
aCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATa > 1:4934222/1‑93 (MQ=255)
aCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATa < 2:178141/93‑1 (MQ=255)
cATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaaa > 1:2875127/1‑93 (MQ=255)
tCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGa > 1:5028798/1‑93 (MQ=255)
tCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGa > 1:1331558/1‑93 (MQ=255)
tCTTCACTGGAGAAATGGGTAATTAACTCAAAGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGa > 1:829504/1‑93 (MQ=255)
cTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAt < 1:191815/93‑1 (MQ=255)
cTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAt < 2:393036/93‑1 (MQ=255)
tCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATtc < 2:1980933/93‑1 (MQ=255)
aCTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATtctc > 1:4664829/1‑93 (MQ=255)
cTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTcc > 1:3302370/1‑93 (MQ=255)
ggAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaa > 1:687038/1‑93 (MQ=255)
ggAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaa > 1:3066894/1‑93 (MQ=255)
ggAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaa < 1:4701313/93‑1 (MQ=255)
aaaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaaa > 2:5678280/1‑93 (MQ=255)
aTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAt < 1:4034645/93‑1 (MQ=255)
tGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATc < 2:2190917/93‑1 (MQ=255)
gggTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCt > 1:3109086/1‑93 (MQ=255)
gTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTc > 2:1645418/1‑93 (MQ=255)
gTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCACAATGATAAAGATTCTCCAAAAAAAGCTTc < 1:4280059/93‑1 (MQ=255)
tAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCa < 1:1004326/93‑1 (MQ=255)
aaTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAt < 1:3787187/93‑1 (MQ=255)
aTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATg > 2:5889500/1‑93 (MQ=255)
aTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATg < 2:4526069/93‑1 (MQ=255)
aTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAACCTTCATg < 2:3352830/93‑1 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg > 2:5191517/1‑93 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg < 2:1376573/93‑1 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg < 1:3753446/93‑1 (MQ=255)
tAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGt < 2:430200/93‑1 (MQ=255)
aaCGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGt > 2:5404246/1‑93 (MQ=255)
cGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTcc < 2:2700120/93‑1 (MQ=255)
cGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTcc < 2:4413751/93‑1 (MQ=255)
gCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTccc > 1:556992/1‑93 (MQ=255)
ccGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCct < 2:1870144/93‑1 (MQ=255)
cGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctc > 1:796725/1‑93 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct > 2:2023281/1‑93 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 2:5037365/93‑1 (MQ=255)
aCAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCtctc < 2:4158545/93‑1 (MQ=255)
aCAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCtctc > 1:270429/1‑93 (MQ=255)
aCAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCtctc < 1:3496212/93‑1 (MQ=255)
aaGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGa > 2:5696872/1‑93 (MQ=255)
aGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGaa < 1:2847053/93‑1 (MQ=255)
aGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGaa < 2:2232892/93‑1 (MQ=255)
ggACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAg < 1:572251/93‑1 (MQ=255)
ggACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAg < 2:3484940/93‑1 (MQ=255)
ggACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAg < 1:4011002/93‑1 (MQ=255)
aCTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGa < 1:4551933/93‑1 (MQ=255)
aCTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGa < 1:6223190/93‑1 (MQ=255)
aCTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGa < 1:2142432/93‑1 (MQ=255)
ttGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATg > 2:153686/1‑93 (MQ=255)
tGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGt < 1:5488912/93‑1 (MQ=255)
gCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTGCCTCTCGAAGGATGtt > 1:1955400/1‑93 (MQ=255)
cTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGttt < 2:2109419/93‑1 (MQ=255)
cTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGttt > 1:2359921/1‑93 (MQ=255)
cTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGttt < 1:2734145/93‑1 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt < 1:3352436/93‑1 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt > 1:3006167/1‑93 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt > 1:2568776/1‑93 (MQ=255)
ttGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCa < 1:5837604/93‑1 (MQ=255)
|
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCA > NC_000913/1789896‑1790075
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT > NC_000913/1789895‑1790079
|
CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCT > SRR4302533.6260290/1‑94 (MQ=60)
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTC > SRR4302533.4225325/1‑94 (MQ=60)
CTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCT > SRR4302533.539305/1‑94 (MQ=60)
CTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCT < SRR4302533.3552014/94‑1 (MQ=60)
CTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCT > SRR4302533.2069161/1‑94 (MQ=60)
ATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTA < SRR4302533.758982/94‑1 (MQ=60)
TAACCCGACTCGTCGGGATACGCACCGCACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGCCTTCCTGGTTGCCTCTTAT > SRR4302533.1817103/1‑94 (MQ=60)
TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT < SRR4302533.4331883/94‑1 (MQ=60)
AACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGGAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATC > SRR4302533.3038679/1‑94 (MQ=60)
CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG < SRR4302533.5558340/94‑1 (MQ=60)
CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG < SRR4302533.2063530/94‑1 (MQ=60)
CCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGC < SRR4302533.2057528/94‑1 (MQ=60)
CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCA > SRR4302533.4798694/1‑94 (MQ=60)
CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCA > SRR4302533.4402859/1‑94 (MQ=60)
TCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAA < SRR4302533.3893701/94‑1 (MQ=60)
CGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAA > SRR4302533.25042/1‑94 (MQ=60)
GTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAT < SRR4302533.1659168/94‑1 (MQ=60)
TCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATA < SRR4302533.4193824/94‑1 (MQ=60)
TCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATA < SRR4302533.2776211/94‑1 (MQ=60)
GGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCA > SRR4302533.2307753/1‑94 (MQ=60)
GATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAA < SRR4302533.833077/94‑1 (MQ=60)
ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAT < SRR4302533.3442977/94‑1 (MQ=60)
ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAT > SRR4302533.1854142/1‑94 (MQ=60)
TACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATC < SRR4302533.5025737/94‑1 (MQ=60)
ACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCA < SRR4302533.2157750/94‑1 (MQ=60)
ACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCA < SRR4302533.6116179/94‑1 (MQ=60)
GAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGA < SRR4302533.5585805/94‑1 (MQ=60)
AACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAA < SRR4302533.3436967/94‑1 (MQ=60)
ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT > SRR4302533.5474259/1‑94 (MQ=60)
CCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATG > SRR4302533.5820304/1‑94 (MQ=60)
CGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGA < SRR4302533.2215986/94‑1 (MQ=60)
TACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA > SRR4302533.4964100/1‑94 (MQ=60)
CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA > SRR4302533.2892819/1‑94 (MQ=60)
ATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGA > SRR4302533.5059246/1‑94 (MQ=60)
ATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGA > SRR4302533.1339546/1‑94 (MQ=60)
ATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAAA > SRR4302533.4632562/1‑94 (MQ=60)
ATCTTCACTGGAGAAATGGGTAATTAACTCAAAGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGA > SRR4302533.834369/1‑94 (MQ=60)
TCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAT < SRR4302533.1460619/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302533.193024/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302533.2805316/94‑1 (MQ=60)
CACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC > SRR4302533.4693090/1‑94 (MQ=60)
CACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTC > SRR4302533.4904047/1‑94 (MQ=60)
ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCC > SRR4302533.3322761/1‑94 (MQ=60)
TGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAA > SRR4302533.3085732/1‑94 (MQ=60)
TGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAA > SRR4302533.691102/1‑94 (MQ=60)
TGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAA < SRR4302533.1939831/94‑1 (MQ=60)
GGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAA < SRR4302533.4729817/94‑1 (MQ=60)
GAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAA > SRR4302533.16970/1‑94 (MQ=60)
AGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAA < SRR4302533.4693445/94‑1 (MQ=60)
GAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAA < SRR4302533.355437/94‑1 (MQ=60)
GAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAA > SRR4302533.286986/1‑94 (MQ=60)
AAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAA > SRR4302533.3103035/1‑94 (MQ=60)
ATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATC < SRR4302533.4059205/94‑1 (MQ=60)
TGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCT > SRR4302533.3128197/1‑94 (MQ=60)
TGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCT < SRR4302533.44913/94‑1 (MQ=60)
TGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCT > SRR4302533.956804/1‑94 (MQ=60)
GTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCACAATGATAAAGATTCTCCAAAAAAAGCTTCA < SRR4302533.4305792/94‑1 (MQ=60)
TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAT < SRR4302533.1010199/94‑1 (MQ=60)
AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATG < SRR4302533.3810375/94‑1 (MQ=60)
ATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGG < SRR4302533.2599617/94‑1 (MQ=60)
TTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGT < SRR4302533.3776453/94‑1 (MQ=60)
TAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTA > SRR4302533.2013029/1‑94 (MQ=60)
CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACC > SRR4302533.3172102/1‑94 (MQ=60)
CAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGT > SRR4302533.2057941/1‑94 (MQ=60)
AACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTC < SRR4302533.2923277/94‑1 (MQ=60)
ACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCC < SRR4302533.5595717/94‑1 (MQ=60)
CGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCC > SRR4302533.560296/1‑94 (MQ=60)
CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTC < SRR4302533.3524670/94‑1 (MQ=60)
CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTC > SRR4302533.801413/1‑94 (MQ=60)
CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTC > SRR4302533.2148058/1‑94 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTC > SRR4302533.272071/1‑94 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTC < SRR4302533.3501392/94‑1 (MQ=60)
ACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCG < SRR4302533.3517772/94‑1 (MQ=60)
CAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGA > SRR4302533.6050888/1‑94 (MQ=60)
AGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG < SRR4302533.4252523/94‑1 (MQ=60)
AGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG < SRR4302533.2864575/94‑1 (MQ=60)
AGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG < SRR4302533.685117/94‑1 (MQ=60)
GGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGG < SRR4302533.4035422/94‑1 (MQ=60)
GGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGG < SRR4302533.575628/94‑1 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT < SRR4302533.6260485/94‑1 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT < SRR4302533.2155633/94‑1 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT > SRR4302533.3785619/1‑94 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT < SRR4302533.4579540/94‑1 (MQ=60)
TTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGT > SRR4302533.2730682/1‑94 (MQ=60)
TGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTGCCTCTCGAAGGATGTT > SRR4302533.1967314/1‑94 (MQ=60)
TGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTT < SRR4302533.5522002/94‑1 (MQ=60)
GCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTT > SRR4302533.2374504/1‑94 (MQ=60)
GCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTT < SRR4302533.5131745/94‑1 (MQ=60)
CTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTT > SRR4302533.2584582/1‑94 (MQ=60)
CTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTT < SRR4302533.2750915/94‑1 (MQ=60)
CTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTT > SRR4302533.3024555/1‑94 (MQ=60)
TGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTT < SRR4302533.3373145/94‑1 (MQ=60)
TTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAG < SRR4302533.5872899/94‑1 (MQ=60)
TGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGT > SRR4302533.4933388/1‑94 (MQ=60)
TGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGT > SRR4302533.4404028/1‑94 (MQ=60)
CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT < SRR4302533.548163/94‑1 (MQ=60)
CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT > SRR4302533.2188674/1‑94 (MQ=60)
CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT < SRR4302533.2845783/94‑1 (MQ=60)
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CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT > NC_000913/1789895‑1790079
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
