Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,892,514 |
T→C |
intergenic (+58/+62) |
b1810 → / ← b1811 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,892,514 | 0 | T | C | 100.0%
| 947.6
/ NA
| 293 | intergenic (+58/+62) | b1810/b1811 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (157/136); total (157/136) |
Only 100 of 304 total aligned reads displayed.
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > NC_000913/1892424‑1892603
|
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc > 2:5001162/1‑93 (MQ=255)
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc < 1:9941041/93‑1 (MQ=255)
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc > 2:8178996/1‑93 (MQ=255)
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc > 1:2642514/1‑93 (MQ=255)
tatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑tt > 1:6438156/1‑93 (MQ=255)
tatGCAGGAAGAACTAAAAGCACTGGCCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGAAGCTTTTAATCACATATAAAAAGCGCCC‑tt > 1:3527216/1‑93 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑ttt > 1:8594265/1‑93 (MQ=255)
tGCAGGAATAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑tttt > 2:3779534/1‑93 (MQ=255)
gCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑ttttt > 2:7962956/1‑93 (MQ=255)
gaagaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTca > 1:10015867/1‑93 (MQ=255)
gaaCTAAAAGCACTGGTCTGAGTTAAATTTGTATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACaa > 2:4239802/1‑93 (MQ=255)
gaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACaa > 2:8026494/1‑93 (MQ=255)
caaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAGAAGCGCCC‑TTTTTCTCACaa < 1:2165392/92‑1 (MQ=255)
cTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑CTTTTCTCACAATCa > 1:8927395/1‑93 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCaa < 1:2886242/93‑1 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTTCTCACAATCa > 1:330596/1‑93 (MQ=255)
tAAAAGCACTGGTCAGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑GTTTTCTCACAATCaa < 2:3575472/93‑1 (MQ=255)
aaaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCaaa > 1:4542652/1‑93 (MQ=255)
aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAAt < 1:5740210/93‑1 (MQ=255)
gCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGat > 2:4518776/1‑93 (MQ=255)
cACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatc < 2:1500323/93‑1 (MQ=255)
aCTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatca < 1:4063776/93‑1 (MQ=255)
aCTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatca < 2:6837456/93‑1 (MQ=255)
cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatcat < 1:9568608/93‑1 (MQ=255)
cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatcat < 1:5866527/93‑1 (MQ=255)
cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatcat > 1:389561/1‑93 (MQ=255)
cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGatcat > 2:9052997/1‑93 (MQ=255)
tGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCACATGatcatc > 2:7767479/1‑93 (MQ=255)
tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTTACAATCAAATGATCATCGGc > 2:7162976/1‑93 (MQ=255)
tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGc < 1:8984826/93‑1 (MQ=255)
cTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCt < 2:9393489/93‑1 (MQ=255)
cTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCt < 2:5924113/93‑1 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGTACGCTTTTAATCACATATAAAAAGCGCTC‑TTTTTCTCACAATCAAATGATCATCGGCtt < 1:733445/93‑1 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCtt > 1:4694246/1‑93 (MQ=255)
gAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTc < 1:9628634/93‑1 (MQ=255)
aGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCt > 2:8702401/1‑93 (MQ=255)
gTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCta < 1:1315091/93‑1 (MQ=255)
ttAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCtat < 1:3684558/93‑1 (MQ=255)
tAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCtata > 2:8090638/1‑93 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATaa > 1:8071946/1‑93 (MQ=255)
aaTTTATATCTGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAAc < 2:628789/93‑1 (MQ=255)
aaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAAc > 1:5111332/1‑93 (MQ=255)
aTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACg > 1:6973669/1‑93 (MQ=255)
ttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaa > 1:1389673/1‑93 (MQ=255)
tataTCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaaa > 1:1979203/1‑93 (MQ=255)
tataTCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaaa > 2:1831768/1‑93 (MQ=255)
atatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAt < 1:4131250/93‑1 (MQ=255)
atatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAt < 1:6071580/93‑1 (MQ=255)
tatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATc > 2:2659025/1‑93 (MQ=255)
cAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGAt < 1:9478853/93‑1 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAATGAAATCGATa > 1:722046/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa < 2:6745648/93‑1 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc > 1:270418/1‑93 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc < 2:4588065/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACggt > 1:6413041/1‑92 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 2:4637377/1‑93 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 1:1204262/1‑93 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa < 2:8548701/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 2:9242787/1‑93 (MQ=255)
aaaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAt > 1:8378439/1‑93 (MQ=255)
aaaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAt > 2:75579/1‑93 (MQ=255)
aTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTa < 1:7476385/93‑1 (MQ=255)
tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg < 2:7344799/93‑1 (MQ=255)
tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg < 1:6178839/93‑1 (MQ=255)
aGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGtt > 2:890958/1‑93 (MQ=255)
aGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGtt > 2:5629478/1‑93 (MQ=255)
ggtcGCTTTTAATCACATAT‑AAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc > 2:7939713/4‑93 (MQ=255)
ggACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa > 1:6816584/1‑93 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc > 1:904661/1‑93 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc < 2:3338258/93‑1 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc > 2:1180225/1‑93 (MQ=255)
aCGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACt < 2:398978/93‑1 (MQ=255)
cGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTc > 2:5123437/1‑93 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg < 1:656296/93‑1 (MQ=255)
cTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGt < 1:7588064/93‑1 (MQ=255)
cTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGt > 1:4305166/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 2:4185525/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 2:216373/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc < 1:1810633/93‑1 (MQ=255)
ttttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 1:8808729/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 1:9144674/1‑93 (MQ=255)
tttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCt < 2:9572085/93‑1 (MQ=255)
ttAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCtt > 1:8248938/1‑93 (MQ=255)
tAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTc > 1:5289999/1‑93 (MQ=255)
aTCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAt < 2:5361875/93‑1 (MQ=255)
aTCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAt > 2:2122362/1‑93 (MQ=255)
tCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc > 2:3485777/1‑93 (MQ=255)
cacaTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATcc > 1:5543353/1‑93 (MQ=255)
cacaTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATcc > 2:1038328/1‑93 (MQ=255)
acaTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCt < 1:1081809/93‑1 (MQ=255)
acaTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCt > 1:7779222/1‑93 (MQ=255)
caTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTATTCGTCTTCATCCTc > 1:3330938/1‑93 (MQ=255)
caTATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTc > 2:306884/1‑93 (MQ=255)
atatAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCa > 1:8172551/1‑93 (MQ=255)
atatAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCa > 2:3187878/1‑93 (MQ=255)
tataAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa > 2:1569838/1‑93 (MQ=255)
tataAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa > 1:265966/1‑93 (MQ=255)
aaaaaGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc < 1:9807227/93‑1 (MQ=255)
aaaaaGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc > 2:7028241/1‑93 (MQ=255)
gcgcCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGAGcc > 1:2448411/1‑93 (MQ=255)
|
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > NC_000913/1892424‑1892603
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > NC_000913/1892421‑1892605
|
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGC > SRR4302540.7047932/1‑94 (MQ=60)
CATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCC > SRR4302540.2272077/1‑94 (MQ=60)
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC > SRR4302540.2671179/1‑94 (MQ=60)
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC < SRR4302540.5426976/94‑1 (MQ=60)
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCG‑CC‑T > SRR4302540.6800571/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑T > SRR4302540.10136034/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑T > SRR4302540.10136036/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑T > SRR4302540.7313107/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑T > SRR4302540.7313106/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑T < SRR4302540.10057147/94‑1 (MQ=60)
ATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TT < SRR4302540.6934021/94‑1 (MQ=60)
ATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TT > SRR4302540.6509813/1‑94 (MQ=60)
ATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TT < SRR4302540.9229606/94‑1 (MQ=60)
ATATGCAGGAAGAACTAAAAGCACTGGCCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGAAGCTTTTAATCACATATAAAAAGCGCCC‑TT > SRR4302540.3565684/1‑94 (MQ=60)
TATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTT < SRR4302540.6531250/94‑1 (MQ=60)
TATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTT > SRR4302540.8694167/1‑94 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTT > SRR4302540.989730/1‑94 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTT < SRR4302540.1305285/94‑1 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTT > SRR4302540.61502/1‑94 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTT < SRR4302540.9637963/94‑1 (MQ=60)
TGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTT < SRR4302540.4332659/94‑1 (MQ=60)
TGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTT < SRR4302540.5895010/94‑1 (MQ=60)
TGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCC‑TTTTT > SRR4302540.2674702/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCA > SRR4302540.226138/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCA > SRR4302540.1338901/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCA > SRR4302540.10132456/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCA < SRR4302540.2871998/94‑1 (MQ=60)
GAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCAC > SRR4302540.490639/1‑94 (MQ=60)
AGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAA > SRR4302540.8056972/1‑94 (MQ=60)
GAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAAT < SRR4302540.1381441/94‑1 (MQ=60)
GAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAAT > SRR4302540.8834253/1‑94 (MQ=60)
CAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAGAAGCGCCC‑TTTTTCTCACAAT < SRR4302540.2188714/94‑1 (MQ=60)
AACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATC > SRR4302540.6515673/1‑94 (MQ=60)
ACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑CTTTTCTCACAATCA > SRR4302540.9031332/1‑94 (MQ=60)
CTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTTCTCACAATCA > SRR4302540.333913/1‑94 (MQ=60)
TAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAA > SRR4302540.4591811/1‑94 (MQ=60)
TAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAA < SRR4302540.2917667/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAAT > SRR4302540.4339632/1‑94 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAAT < SRR4302540.7442275/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAAT < SRR4302540.2070122/94‑1 (MQ=60)
AAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATG < SRR4302540.5803481/94‑1 (MQ=60)
AAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGA > SRR4302540.8206896/1‑94 (MQ=60)
AGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGAT < SRR4302540.4992828/94‑1 (MQ=60)
GCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATC < SRR4302540.2628170/94‑1 (MQ=60)
CACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCA > SRR4302540.3565535/1‑94 (MQ=60)
CACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCA < SRR4302540.1254600/94‑1 (MQ=60)
ACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCAT < SRR4302540.4107590/94‑1 (MQ=60)
ACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCAT < SRR4302540.4107588/94‑1 (MQ=60)
ACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCAT > SRR4302540.393587/1‑94 (MQ=60)
ACTGGTCTGAGTTAAATTTAGATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCAT < SRR4302540.5613463/94‑1 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATC < SRR4302540.4662274/94‑1 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATC < SRR4302540.5931383/94‑1 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATC < SRR4302540.8718683/94‑1 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATC < SRR4302540.4568855/94‑1 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATC < SRR4302540.9681673/94‑1 (MQ=60)
TGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCG > SRR4302540.720688/1‑94 (MQ=60)
GGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGG < SRR4302540.7520292/94‑1 (MQ=60)
GTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGC > SRR4302540.4474267/1‑94 (MQ=60)
TCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCT > SRR4302540.5953800/1‑94 (MQ=60)
TCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCT < SRR4302540.9092104/94‑1 (MQ=60)
TCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCT > SRR4302540.1207964/1‑94 (MQ=60)
CTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTT > SRR4302540.4744430/1‑94 (MQ=60)
CTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTT > SRR4302540.274998/1‑94 (MQ=60)
TGAGTTAAATTTATATCAGCATAAATGGGTCAGTACGCTTTTAATCACATATAAAAAGCGCTC‑TTTTTCTCACAATCAAATGATCATCGGCTTC < SRR4302540.741288/94‑1 (MQ=60)
TGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTC > SRR4302540.6487302/1‑94 (MQ=60)
GAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCT < SRR4302540.9742098/94‑1 (MQ=60)
AGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTA < SRR4302540.1111628/94‑1 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTAT < SRR4302540.1328766/94‑1 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTAT > SRR4302540.413334/1‑94 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTAT < SRR4302540.4017693/94‑1 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTAT > SRR4302540.5348675/1‑94 (MQ=60)
TTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATA > SRR4302540.6774258/1‑94 (MQ=60)
TTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATA < SRR4302540.3440448/94‑1 (MQ=60)
TTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATA < SRR4302540.3724825/94‑1 (MQ=60)
TTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATA < SRR4302540.5350692/94‑1 (MQ=60)
TAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAA > SRR4302540.5806129/1‑94 (MQ=60)
TAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAA > SRR4302540.8165604/1‑94 (MQ=60)
AAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAAC > SRR4302540.5166660/1‑94 (MQ=60)
AAATATATATCAGCATAAATGGGTCAGGACACTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAAC < SRR4302540.9073086/94‑1 (MQ=60)
AATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACG > SRR4302540.7051172/1‑94 (MQ=60)
AATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACG > SRR4302540.3588840/1‑94 (MQ=60)
TTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAA < SRR4302540.9711306/94‑1 (MQ=60)
TTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAA < SRR4302540.2379197/94‑1 (MQ=60)
TTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAA > SRR4302540.1404542/1‑94 (MQ=60)
TTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAA > SRR4302540.2000678/1‑94 (MQ=60)
TTATATCAGCATAAATGGGTCAGGACGCTTGTAATCACATATAAAAAGTGCCC‑TTTTTCTCACAATCAAATGATCAGCGGCTTCTATAACGAAA > SRR4302540.9070936/1‑94 (MQ=60)
TATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAT > SRR4302540.9708245/1‑94 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC < SRR4302540.6139084/94‑1 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC < SRR4302540.4175928/94‑1 (MQ=60)
ATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGA > SRR4302540.2646333/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAATGAAATCGATA > SRR4302540.729784/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA < SRR4302540.9591259/94‑1 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA < SRR4302540.7996685/94‑1 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA < SRR4302540.9913948/94‑1 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC > SRR4302540.273079/1‑94 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC < SRR4302540.6960120/94‑1 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC < SRR4302540.2673334/94‑1 (MQ=60)
CATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGG > SRR4302540.1950511/1‑94 (MQ=60)
CATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGG < SRR4302540.1576809/94‑1 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGT > SRR4302540.6484408/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302540.6280593/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302540.1216631/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302540.890733/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302540.4159856/1‑94 (MQ=60)
TAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAT > SRR4302540.8475663/1‑94 (MQ=60)
TAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAT < SRR4302540.9669085/94‑1 (MQ=60)
ATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAG < SRR4302540.7559820/94‑1 (MQ=60)
TGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGT < SRR4302540.6830399/94‑1 (MQ=60)
TGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGT < SRR4302540.6247672/94‑1 (MQ=60)
TGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGT > SRR4302540.6417839/1‑94 (MQ=60)
GGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTG > SRR4302540.9548385/1‑94 (MQ=60)
GGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTG < SRR4302540.7579578/94‑1 (MQ=60)
GGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTG < SRR4302540.7579579/94‑1 (MQ=60)
GGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGT > SRR4302540.177061/1‑94 (MQ=60)
GGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGT < SRR4302540.5309112/94‑1 (MQ=60)
GGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGT > SRR4302540.8300470/1‑94 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGT > SRR4302540.10012631/1‑94 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT < SRR4302540.9105769/94‑1 (MQ=60)
AGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTA > SRR4302540.8200905/1‑94 (MQ=60)
AGGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTA > SRR4302540.6892034/1‑94 (MQ=60)
GGACTCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAC < SRR4302540.6128184/94‑1 (MQ=60)
GGACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAC > SRR4302540.914264/1‑94 (MQ=60)
GACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACT < SRR4302540.9413504/94‑1 (MQ=60)
ACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTC > SRR4302540.2699952/1‑94 (MQ=60)
ACGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTC < SRR4302540.5446112/94‑1 (MQ=60)
CGCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCG < SRR4302540.9975579/94‑1 (MQ=60)
GCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGT < SRR4302540.866451/94‑1 (MQ=60)
GCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGT < SRR4302540.1866886/94‑1 (MQ=60)
GCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGT < SRR4302540.663295/94‑1 (MQ=60)
GCTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGT > SRR4302540.4352026/1‑94 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC < SRR4302540.7673282/94‑1 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC > SRR4302540.9254520/1‑94 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC > SRR4302540.8910569/1‑94 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGGC > SRR4302540.8353104/1‑94 (MQ=60)
CTATTAATCACATATAGCAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC < SRR4302540.9093218/94‑1 (MQ=60)
CCTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAATTCGATACGGATTAGTGTGTTACTCGTC < SRR4302540.7673283/94‑1 (MQ=60)
TTTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCT < SRR4302540.1830377/94‑1 (MQ=60)
TTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT < SRR4302540.7811451/94‑1 (MQ=60)
TTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT < SRR4302540.3356407/94‑1 (MQ=60)
TTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT > SRR4302540.8344823/1‑94 (MQ=60)
TTTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT > SRR4302540.8344822/1‑94 (MQ=60)
TTTAATCACATATAAAAAACTCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT < SRR4302540.3356405/94‑1 (MQ=60)
TTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCCAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTC > SRR4302540.3012539/1‑94 (MQ=60)
TTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTC > SRR4302540.5347827/1‑94 (MQ=60)
TTAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTC > SRR4302540.2121116/1‑94 (MQ=60)
TCAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAGTAGAGCGTTACTCGTCTTC > SRR4302540.9024357/1‑94 (MQ=60)
TAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCA < SRR4302540.8680858/94‑1 (MQ=60)
TAATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCA > SRR4302540.5241981/1‑94 (MQ=60)
AATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTTGTCTTCAT > SRR4302540.7154148/1‑94 (MQ=60)
AATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAT > SRR4302540.4665352/1‑94 (MQ=60)
ATCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATC < SRR4302540.5648384/94‑1 (MQ=60)
TCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCC > SRR4302540.8425306/1‑94 (MQ=60)
TCACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCC > SRR4302540.5604415/1‑94 (MQ=60)
CACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCT > SRR4302540.7870157/1‑94 (MQ=60)
ACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTATTCGTCTTCATCCTC > SRR4302540.3367510/1‑94 (MQ=60)
ACATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTC < SRR4302540.1092889/94‑1 (MQ=60)
CATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCA > SRR4302540.8267474/1‑94 (MQ=60)
ATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTTTAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCCA > SRR4302540.6489845/1‑94 (MQ=60)
ATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATCACGAAATCGCTACGGATTAGTGCGCTACTCGTCTTCCTCCTCAA > SRR4302540.268584/1‑94 (MQ=60)
ATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAA < SRR4302540.3728287/94‑1 (MQ=60)
ATATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAA > SRR4302540.268579/1‑94 (MQ=60)
ATAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAA > SRR4302540.6147600/1‑94 (MQ=60)
TAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC < SRR4302540.9583387/94‑1 (MQ=60)
TAAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC < SRR4302540.3226999/94‑1 (MQ=60)
AAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACG > SRR4302540.3611390/1‑94 (MQ=60)
AAAAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACG < SRR4302540.9922020/94‑1 (MQ=60)
AAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCG > SRR4302540.3804076/1‑94 (MQ=60)
AAAGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCG < SRR4302540.9186013/94‑1 (MQ=60)
AGCGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGAGCC > SRR4302540.2474772/1‑94 (MQ=60)
CGCCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > SRR4302540.7621977/1‑94 (MQ=60)
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ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCC‑TTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > NC_000913/1892421‑1892605
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
