Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,908,347	T→C	G16G (GGT→GGC)	b1828 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,908,347	0	T	C	99.7%	1000.6 / NA	316	G16G (GGT→GGC)	b1828	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (150/165); total (151/165)
Fisher's exact test for biased strand distribution p-value = 4.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 328 total aligned reads displayed.

AATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCT  >  NC_000913/1908257‑1908436

 aTCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGcgcg                                                                                        <  2:7775909/93‑1 (MQ=255)

  tCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGa                                                                                       >  1:7512014/1‑93 (MQ=255)

  tCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGa                                                                                       >  2:2485211/1‑93 (MQ=255)

  tCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGa                                                                                       <  1:378320/93‑1 (MQ=255)

   cATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGat                                                                                      >  2:7589474/1‑93 (MQ=255)

     tACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGatat                                                                                    >  2:4729168/1‑93 (MQ=255)

      aCCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATAtt                                                                                   >  1:796312/1‑93 (MQ=255)

        cccTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTaa                                                                                 >  1:8944524/1‑93 (MQ=255)

         ccTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAc                                                                                >  1:1201067/1‑93 (MQ=255)

         ccTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAc                                                                                >  2:4592771/1‑93 (MQ=255)

         ccTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAc                                                                                <  2:1865994/93‑1 (MQ=255)

         ccTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAc                                                                                >  2:3990980/1‑93 (MQ=255)

           tGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCa                                                                              >  2:734760/1‑93 (MQ=255)

           tGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCa                                                                              >  2:5105294/1‑93 (MQ=255)

           tGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCa                                                                              >  1:7671775/1‑93 (MQ=255)

            gTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAt                                                                             >  2:8443891/1‑93 (MQ=255)

            gTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAt                                                                             >  2:3799118/1‑93 (MQ=255)

            gTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAt                                                                             <  1:305235/93‑1 (MQ=255)

             ttGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAtt                                                                            >  1:7922961/1‑93 (MQ=255)

             ttGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAtt                                                                            <  2:8049653/93‑1 (MQ=255)

               gATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTTCCATTGCCCCAGCGATACGGCGCGATATTAACCATagt                                                                          >  2:8973357/1‑93 (MQ=255)

               gATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATtgt                                                                          >  2:7262546/1‑93 (MQ=255)

                 ttattCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGa                                                                        >  1:9409993/1‑93 (MQ=255)

                 ttattCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGa                                                                        >  2:8548921/1‑93 (MQ=255)

                 ttattCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGa                                                                        <  1:5029320/93‑1 (MQ=255)

                 ttattCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGa                                                                        >  1:6015987/1‑93 (MQ=255)

                 ttattCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGa                                                                        <  2:916718/93‑1 (MQ=255)

                   attCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGAtt                                                                      >  2:7806515/1‑93 (MQ=255)

                     tCACCAAAAATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTgg                                                                    <  2:8301627/93‑1 (MQ=255)

                      cACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGt                                                                   >  1:3611487/1‑93 (MQ=255)

                       aCCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCCGCGATACGGCGCGATATTAACCATTGTGATTGGTa                                                                  >  1:4372650/1‑93 (MQ=255)

                       aCCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTa                                                                  <  1:836799/93‑1 (MQ=255)

                       aCCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTa                                                                  <  1:5409788/93‑1 (MQ=255)

                         cAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAtt                                                                >  2:5626390/1‑93 (MQ=255)

                         cAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAtt                                                                <  1:7262617/93‑1 (MQ=255)

                         cAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAtt                                                                >  1:3243411/1‑93 (MQ=255)

                         cAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAtt                                                                <  1:1921001/93‑1 (MQ=255)

                         cAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAtt                                                                >  2:147743/1‑93 (MQ=255)

                          aaaGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAttt                                                               >  2:5973637/1‑93 (MQ=255)

                          aaaGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAttt                                                               >  1:4586298/1‑93 (MQ=255)

                           aaGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTc                                                              <  2:8788750/93‑1 (MQ=255)

                           aaGATATAAAATTCCTATGCCAAAAGTGCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTc                                                              <  2:6953488/93‑1 (MQ=255)

                            aGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCg                                                             >  1:5634943/1‑93 (MQ=255)

                            aGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCg                                                             <  1:5345383/93‑1 (MQ=255)

                               tataAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATg                                                          <  2:5842409/93‑1 (MQ=255)

                                 taAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGc                                                        >  2:2907558/1‑93 (MQ=255)

                                   aaaTTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCg                                                      <  2:1016029/93‑1 (MQ=255)

                                    aaTTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGt                                                     >  2:8166848/1‑93 (MQ=255)

                                     aTTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTc                                                    >  2:9462893/1‑93 (MQ=255)

                                        ccTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCtt                                                 >  1:8686153/1‑93 (MQ=255)

                                         cTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTg                                                <  1:848717/93‑1 (MQ=255)

                                          tATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGa                                               <  2:3936218/93‑1 (MQ=255)

                                           aTGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGAc                                              <  2:3178958/93‑1 (MQ=255)

                                            tGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACg                                             >  1:1731902/1‑93 (MQ=255)

                                               cAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCTATTGCCGTCCTTGACGgcg                                          >  1:6323377/1‑93 (MQ=255)

                                                aaaaGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGgcgc                                         >  2:6022583/1‑93 (MQ=255)

                                                  aaGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCaa                                       >  2:2245101/1‑93 (MQ=255)

                                                  aaGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCaa                                       >  2:2847345/1‑93 (MQ=255)

                                                   aGTTCAGGCGGACGGCCTGCCATTGCCACAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAAt                                      <  2:3368174/93‑1 (MQ=255)

                                                   aGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAAt                                      >  1:2378486/1‑93 (MQ=255)

                                                   aGTGCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAAt                                      <  1:4113893/93‑1 (MQ=255)

                                                    gTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATc                                     <  1:3639570/93‑1 (MQ=255)

                                                     ttCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCg                                    >  1:5210478/1‑93 (MQ=255)

                                                     ttCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCg                                    >  1:4771326/1‑93 (MQ=255)

                                                      tCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGc                                   >  2:1669743/1‑93 (MQ=255)

                                                      tCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGc                                   >  1:9154623/1‑93 (MQ=255)

                                                        aGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCa                                 >  2:1738722/1‑93 (MQ=255)

                                                         ggCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCaa                                <  2:4974692/93‑1 (MQ=255)

                                                         ggCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCaa                                <  1:4067020/93‑1 (MQ=255)

                                                          gCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAc                               <  2:3445832/93‑1 (MQ=255)

                                                          gCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAc                               >  1:2411531/1‑93 (MQ=255)

                                                          gCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAc                               <  1:2177200/93‑1 (MQ=255)

                                                           ccGGCGGCCTACCAGTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACg                              <  1:8039684/93‑1 (MQ=255)

                                                            cGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGt                             <  1:8307838/93‑1 (MQ=255)

                                                            cGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGt                             <  1:2520901/93‑1 (MQ=255)

                                                             gACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTc                            >  1:874651/1‑93 (MQ=255)

                                                             gACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTc                            <  2:6723299/93‑1 (MQ=255)

                                                               cGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGc                          <  1:10011487/93‑1 (MQ=255)

                                                                 gCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGccc                        <  2:6786551/93‑1 (MQ=255)

                                                                 gCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGccc                        >  1:6371247/1‑93 (MQ=255)

                                                                 gCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGccc                        <  2:5341484/93‑1 (MQ=255)

                                                                 gCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGccc                        >  1:707191/1‑93 (MQ=255)

                                                                    tGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGc                     >  1:6028888/1‑93 (MQ=255)

                                                                    tGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGc                     >  1:9806865/1‑93 (MQ=255)

                                                                       cATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCcaa                  >  1:1857958/1‑93 (MQ=255)

                                                                       cATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCcaa                  <  1:1483467/93‑1 (MQ=255)

                                                                        aTTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCcaac                 >  2:1102067/1‑93 (MQ=255)

                                                                          tGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCcaacaa               <  1:5739114/93‑1 (MQ=255)

                                                                           gCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAt              <  2:7448133/93‑1 (MQ=255)

                                                                           gCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAt              >  1:6514229/1‑93 (MQ=255)

                                                                              ccAGCGATACGGCGCGATATTAACCATTGTTATTGGTATTACGATGACCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGc           <  2:4207852/93‑1 (MQ=255)

                                                                              ccAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCACTCGCCAACGTCGCCCTGCCAACAATCGc           >  1:5773939/1‑93 (MQ=255)

                                                                              ccAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGc           >  1:9528446/1‑93 (MQ=255)

                                                                               cAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGcc          >  2:9288631/1‑93 (MQ=255)

                                                                               cAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGcc          <  2:9749444/93‑1 (MQ=255)

                                                                                aGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCa         >  2:6141836/1‑93 (MQ=255)

                                                                                aGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCa         <  2:3532931/93‑1 (MQ=255)

                                                                                aGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCa         <  1:9244849/93‑1 (MQ=255)

                                                                                 gCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCAc        <  2:6407502/93‑1 (MQ=255)

                                                                                       cGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCt  <  1:1078455/93‑1 (MQ=255)

AATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCT  >  NC_000913/1908257‑1908436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAGAATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCAT  >  NC_000913/1908254‑1908440

TAGAATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGC                                                                                               >  SRR4302540.9134280/1‑94 (MQ=60)

    ATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGA                                                                                           >  SRR4302540.7595987/1‑94 (MQ=60)

     TCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGAT                                                                                          <  SRR4302540.382234/94‑1 (MQ=60)

      CATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATA                                                                                         <  SRR4302540.6463859/94‑1 (MQ=60)

       ATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATAT                                                                                        >  SRR4302540.6092201/1‑94 (MQ=60)

       ATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATAT                                                                                        >  SRR4302540.6092200/1‑94 (MQ=60)

       ATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATAT                                                                                        <  SRR4302540.7987902/94‑1 (MQ=60)

       ATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATAT                                                                                        <  SRR4302540.4165305/94‑1 (MQ=60)

        TACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATT                                                                                       <  SRR4302540.8658104/94‑1 (MQ=60)

        TACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATT                                                                                       >  SRR4302540.4486684/1‑94 (MQ=60)

        TACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATT                                                                                       <  SRR4302540.8020085/94‑1 (MQ=60)

        TACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATT                                                                                       >  SRR4302540.804769/1‑94 (MQ=60)

          CCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAA                                                                                     >  SRR4302540.9049684/1‑94 (MQ=60)

          CCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAA                                                                                     >  SRR4302540.9049685/1‑94 (MQ=60)

           CCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAC                                                                                    >  SRR4302540.1213420/1‑94 (MQ=60)

           CCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAAC                                                                                    <  SRR4302540.3910613/94‑1 (MQ=60)

            CCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACC                                                                                   <  SRR4302540.9960102/94‑1 (MQ=60)

            CCTGGTGAATATTCACCAAAGATATAAAATTCCTAAGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACC                                                                                   <  SRR4302540.9639756/94‑1 (MQ=60)

             CTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCA                                                                                  >  SRR4302540.7758341/1‑94 (MQ=60)

              TGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAT                                                                                 <  SRR4302540.4637310/94‑1 (MQ=60)

              TGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAT                                                                                 >  SRR4302540.2010974/1‑94 (MQ=60)

              TGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTGCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCAT                                                                                 <  SRR4302540.882790/94‑1 (MQ=60)

               GTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATT                                                                                <  SRR4302540.308265/94‑1 (MQ=60)

               GTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATT                                                                                >  SRR4302540.8015314/1‑94 (MQ=60)

                 TGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGT                                                                              <  SRR4302540.6505560/94‑1 (MQ=60)

                 TGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGT                                                                              <  SRR4302540.8834583/94‑1 (MQ=60)

                  GATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTG                                                                             <  SRR4302540.1032580/94‑1 (MQ=60)

                  GATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTG                                                                             <  SRR4302540.3344796/94‑1 (MQ=60)

                   ATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGA                                                                            >  SRR4302540.6082707/1‑94 (MQ=60)

                   ATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGA                                                                            <  SRR4302540.2372058/94‑1 (MQ=60)

                   ATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGA                                                                            >  SRR4302540.4616346/1‑94 (MQ=60)

                   ATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGA                                                                            >  SRR4302540.9521888/1‑94 (MQ=60)

                    TTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGAT                                                                           >  SRR4302540.6408956/1‑94 (MQ=60)

                    TTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGAT                                                                           <  SRR4302540.5083744/94‑1 (MQ=60)

                    TTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGAT                                                                           <  SRR4302540.4155031/94‑1 (MQ=60)

                     TATTCACCAAAGATATAAAATTCCTATGCCAAAAGTGCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATT                                                                          <  SRR4302540.5783522/94‑1 (MQ=60)

                        TCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGT                                                                       >  SRR4302540.3650968/1‑94 (MQ=60)

                         CACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCCGCGATACGGCGCGATATTAACCATTGTGATTGGTA                                                                      >  SRR4302540.4420145/1‑94 (MQ=60)

                         CACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTA                                                                      <  SRR4302540.8896203/94‑1 (MQ=60)

                          ACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAT                                                                     >  SRR4302540.2091444/1‑94 (MQ=60)

                          ACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAT                                                                     <  SRR4302540.5469269/94‑1 (MQ=60)

                          ACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTAT                                                                     <  SRR4302540.845688/94‑1 (MQ=60)

                           CCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATT                                                                    >  SRR4302540.3278717/1‑94 (MQ=60)

                           CCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATT                                                                    <  SRR4302540.377387/94‑1 (MQ=60)

                           CCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATT                                                                    <  SRR4302540.2511769/94‑1 (MQ=60)

                           CCAAAGATATAAAATTCCTATGCAAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATT                                                                    <  SRR4302540.4054856/94‑1 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   <  SRR4302540.8362185/94‑1 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   <  SRR4302540.1941953/94‑1 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   >  SRR4302540.8587446/1‑94 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   >  SRR4302540.555686/1‑94 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   <  SRR4302540.7343652/94‑1 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   <  SRR4302540.7343654/94‑1 (MQ=60)

                            CAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTT                                                                   >  SRR4302540.4635699/1‑94 (MQ=60)

                             AAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTATCCATTGTGATTGGTATTTC                                                                  <  SRR4302540.7943591/94‑1 (MQ=60)

                             AAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTC                                                                  <  SRR4302540.8333679/94‑1 (MQ=60)

                             AAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTC                                                                  >  SRR4302540.9695581/1‑94 (MQ=60)

                             AAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTC                                                                  <  SRR4302540.2311564/94‑1 (MQ=60)

                             AAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTC                                                                  <  SRR4302540.9341152/94‑1 (MQ=60)

                              AAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCG                                                                 <  SRR4302540.5818720/94‑1 (MQ=60)

                              AAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCG                                                                 >  SRR4302540.3758120/1‑94 (MQ=60)

                              AAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCG                                                                 >  SRR4302540.5696963/1‑94 (MQ=60)

                              AAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCG                                                                 >  SRR4302540.5696966/1‑94 (MQ=60)

                               AGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGA                                                                <  SRR4302540.5404025/94‑1 (MQ=60)

                               AGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGA                                                                >  SRR4302540.1472907/1‑94 (MQ=60)

                                GATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATCTTACCCATTGTGATTGGTATTTCGAT                                                               >  SRR4302540.3154695/1‑94 (MQ=60)

                                GATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGAT                                                               <  SRR4302540.1165688/94‑1 (MQ=60)

                                 ATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATG                                                              >  SRR4302540.7748071/1‑94 (MQ=60)

                                 ATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATG                                                              <  SRR4302540.5152768/94‑1 (MQ=60)

                                  TATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGG                                                             <  SRR4302540.5868108/94‑1 (MQ=60)

                                       AATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTC                                                        >  SRR4302540.7618659/1‑94 (MQ=60)

                                        ATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCC                                                       >  SRR4302540.9421372/1‑94 (MQ=60)

                                        ATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCC                                                       >  SRR4302540.4311207/1‑94 (MQ=60)

                                        ATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCC                                                       <  SRR4302540.3673335/94‑1 (MQ=60)

                                         TTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCT                                                      >  SRR4302540.4928045/1‑94 (MQ=60)

                                          TCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTT                                                     >  SRR4302540.8787014/1‑94 (MQ=60)

                                          TCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTT                                                     >  SRR4302540.3742777/1‑94 (MQ=60)

                                          TCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTT                                                     <  SRR4302540.8534821/94‑1 (MQ=60)

                                          TCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTT                                                     <  SRR4302540.8425809/94‑1 (MQ=60)

                                           CCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTG                                                    >  SRR4302540.2426056/1‑94 (MQ=60)

                                           CCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTG                                                    >  SRR4302540.1504926/1‑94 (MQ=60)

                                            CTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGA                                                   <  SRR4302540.857720/94‑1 (MQ=60)

                                            CTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGA                                                   >  SRR4302540.6783418/1‑94 (MQ=60)

                                            CTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGA                                                   <  SRR4302540.1188521/94‑1 (MQ=60)

                                             TATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGAC                                                  <  SRR4302540.5329245/94‑1 (MQ=60)

                                             TATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGAC                                                  <  SRR4302540.8442370/94‑1 (MQ=60)

                                             TATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGAC                                                  <  SRR4302540.7392932/94‑1 (MQ=60)

                                             TATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGAC                                                  >  SRR4302540.1753547/1‑94 (MQ=60)

                                              ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACG                                                 <  SRR4302540.9595905/94‑1 (MQ=60)

                                              ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACG                                                 >  SRR4302540.5652400/1‑94 (MQ=60)

                                              ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACG                                                 >  SRR4302540.1750593/1‑94 (MQ=60)

                                                 CCAAAAGTTCAGGCCGCCGGCCTGCCAATGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCG                                              <  SRR4302540.5847122/94‑1 (MQ=60)

                                                 CCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCTATTGCCGTCCTTGACGGCG                                              >  SRR4302540.6393797/1‑94 (MQ=60)

                                                  CAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGC                                             >  SRR4302540.1936839/1‑94 (MQ=60)

                                                     AAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAAT                                          >  SRR4302540.2404115/1‑94 (MQ=60)

                                                      AGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATC                                         <  SRR4302540.6773255/94‑1 (MQ=60)

                                                      AGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATC                                         <  SRR4302540.1533525/94‑1 (MQ=60)

                                                      AGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATC                                         >  SRR4302540.8046959/1‑94 (MQ=60)

                                                      AGTGCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATC                                         <  SRR4302540.4158311/94‑1 (MQ=60)

                                                       GTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCG                                        <  SRR4302540.3679423/94‑1 (MQ=60)

                                                       GTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCG                                        >  SRR4302540.5267246/1‑94 (MQ=60)

                                                       GTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCG                                        >  SRR4302540.4822298/1‑94 (MQ=60)

                                                        TTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGC                                       >  SRR4302540.9264528/1‑94 (MQ=60)

                                                         TCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCC                                      <  SRR4302540.5283324/94‑1 (MQ=60)

                                                         TCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCC                                      <  SRR4302540.4142547/94‑1 (MQ=60)

                                                          CAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCA                                     <  SRR4302540.2256092/94‑1 (MQ=60)

                                                          CAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCA                                     >  SRR4302540.5259334/1‑94 (MQ=60)

                                                            GGCCGACTGCCTGCCAATGCACCAGCGATTCGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCATTCGCCAAC                                   <  SRR4302540.1744262/94‑1 (MQ=60)

                                                            GGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAC                                   <  SRR4302540.1814083/94‑1 (MQ=60)

                                                            GGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAC                                   <  SRR4302540.4991930/94‑1 (MQ=60)

                                                            GGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAC                                   >  SRR4302540.2437526/1‑94 (MQ=60)

                                                            GGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAC                                   <  SRR4302540.4110865/94‑1 (MQ=60)

                                                            GGCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAAC                                   <  SRR4302540.8701984/94‑1 (MQ=60)

                                                             GCCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACG                                  <  SRR4302540.2200683/94‑1 (MQ=60)

                                                              CCGGCGGCCTACCAGTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGT                                 <  SRR4302540.8133111/94‑1 (MQ=60)

                                                              CCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGT                                 <  SRR4302540.8133110/94‑1 (MQ=60)

                                                              CCGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGT                                 <  SRR4302540.9145606/94‑1 (MQ=60)

                                                               CGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTC                                <  SRR4302540.2548122/94‑1 (MQ=60)

                                                               CGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTC                                <  SRR4302540.926190/94‑1 (MQ=60)

                                                               CGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTC                                >  SRR4302540.883931/1‑94 (MQ=60)

                                                               CGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTC                                <  SRR4302540.4777189/94‑1 (MQ=60)

                                                               CGACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTC                                <  SRR4302540.8404294/94‑1 (MQ=60)

                                                                GACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCG                               <  SRR4302540.8483240/94‑1 (MQ=60)

                                                                GACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCG                               <  SRR4302540.5468495/94‑1 (MQ=60)

                                                                GACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCG                               >  SRR4302540.6388163/1‑94 (MQ=60)

                                                                 ACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGC                              <  SRR4302540.7626153/94‑1 (MQ=60)

                                                                 ACGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGC                              <  SRR4302540.8942536/94‑1 (MQ=60)

                                                                  CGGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCC                             <  SRR4302540.10128060/94‑1 (MQ=60)

                                                                   GGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCC                            >  SRR4302540.714791/1‑94 (MQ=60)

                                                                   GGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCC                            >  SRR4302540.8253336/1‑94 (MQ=60)

                                                                   GGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCC                            >  SRR4302540.433945/1‑94 (MQ=60)

                                                                   GGCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCC                            >  SRR4302540.6442189/1‑94 (MQ=60)

                                                                    GCCTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCT                           <  SRR4302540.6083156/94‑1 (MQ=60)

                                                                    GCCTGCCATAGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGCCGCCCT                           <  SRR4302540.4307120/94‑1 (MQ=60)

                                                                      CTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGGCGTCCTTtacggggcaaaaccccacacaccccccc                         >  SRR4302540.9890822/1‑66 (MQ=60)

                                                                      CTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGC                         >  SRR4302540.9921654/1‑94 (MQ=60)

                                                                      CTGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGC                         >  SRR4302540.6095787/1‑94 (MQ=60)

                                                                       TGCCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGACGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCC                        >  SRR4302540.2478199/1‑94 (MQ=60)

                                                                         CCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAA                      >  SRR4302540.1878333/1‑94 (MQ=60)

                                                                         CCATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAA                      <  SRR4302540.9354981/94‑1 (MQ=60)

                                                                          CATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAAC                     <  SRR4302540.1499752/94‑1 (MQ=60)

                                                                           ATTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACA                    >  SRR4302540.5422589/1‑94 (MQ=60)

                                                                            TTGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATTGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAA                   >  SRR4302540.6815907/1‑94 (MQ=60)

                                                                             TGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCCACAAT                  >  SRR4302540.1362912/1‑94 (MQ=60)

                                                                             TGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAT                  >  SRR4302540.6586597/1‑94 (MQ=60)

                                                                             TGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAT                  <  SRR4302540.5580897/94‑1 (MQ=60)

                                                                             TGCCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAT                  <  SRR4302540.5802375/94‑1 (MQ=60)

                                                                             TGCCCCAGCCATACGGCGCGATATTACCCATTGTGATTGTTATTTTGAGGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAAT                  <  SRR4302540.5802377/94‑1 (MQ=60)

                                                                              GCCCCAGCGATAAGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATC                 <  SRR4302540.2732944/94‑1 (MQ=60)

                                                                               CCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCG                <  SRR4302540.5170165/94‑1 (MQ=60)

                                                                               CCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCG                <  SRR4302540.9866000/94‑1 (MQ=60)

                                                                               CCCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCG                <  SRR4302540.9487785/94‑1 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCACTCGCCAACGTCGCCCTGCCAACAATCGC               >  SRR4302540.5837719/1‑94 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGC               >  SRR4302540.2407366/1‑94 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGC               >  SRR4302540.6152586/1‑94 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGC               <  SRR4302540.6398500/94‑1 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGC               <  SRR4302540.1925951/94‑1 (MQ=60)

                                                                                CCCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGC               >  SRR4302540.9641259/1‑94 (MQ=60)

                                                                                 CCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGTCGCAATCGCCAACGTCGCCCTGCCAACAATCGCC              <  SRR4302540.7319682/94‑1 (MQ=60)

                                                                                 CCAGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCC              <  SRR4302540.1032775/94‑1 (MQ=60)

                                                                                   AGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCAG            >  SRR4302540.3270718/1‑94 (MQ=60)

                                                                                   AGCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCAC            <  SRR4302540.9355553/94‑1 (MQ=60)

                                                                                    GCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACG           <  SRR4302540.2836174/94‑1 (MQ=60)

                                                                                    GCGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACG           <  SRR4302540.7559846/94‑1 (MQ=60)

                                                                                     CGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGG          >  SRR4302540.2646076/1‑94 (MQ=60)

                                                                                     CGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGG          <  SRR4302540.3529308/94‑1 (MQ=60)

                                                                                     CGATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGG          >  SRR4302540.9729834/1‑94 (MQ=60)

                                                                                      GATACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGA         >  SRR4302540.8095252/1‑94 (MQ=60)

                                                                                        TACGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACC       >  SRR4302540.3656942/1‑94 (MQ=60)

                                                                                          CGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTT     <  SRR4302540.1089478/94‑1 (MQ=60)

                                                                                          CGGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTT     >  SRR4302540.6068524/1‑94 (MQ=60)

                                                                                           GGCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTC    <  SRR4302540.58819/94‑1 (MQ=60)

                                                                                            GCGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCA   <  SRR4302540.3691499/94‑1 (MQ=60)

                                                                                             CGCGATATTAACCATTGTTATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCAT  >  SRR4302540.9290411/1‑94 (MQ=60)

                                                                                             CGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCAT  <  SRR4302540.10038427/94‑1 (MQ=60)

TAGAATCATACCCCTGTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCAT  >  NC_000913/1908254‑1908440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`