Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,917,590 |
T→C |
V688A (GTC→GCC) |
b1834 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,917,590 | 0 | T | C | 100.0%
| 614.7
/ NA
| 189 | V688A (GTC→GCC) | b1834 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (104/85); total (104/85) |
Only 100 of 193 total aligned reads displayed.
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCC > NC_000913/1917500‑1917679
|
tcGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGccc < 1:7255785/93‑1 (MQ=255)
tcGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGccc > 1:7920553/1‑93 (MQ=255)
gTATTGATATCGGGCAAATCCAGTCGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGa < 2:8615505/93‑1 (MQ=255)
gTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGa < 1:9612263/93‑1 (MQ=255)
gTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGa < 2:2040086/93‑1 (MQ=255)
ttGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCt < 1:7480079/93‑1 (MQ=255)
ttGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCt > 1:2641832/1‑93 (MQ=255)
gATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCttt < 2:824721/93‑1 (MQ=255)
atatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTg < 1:6259266/93‑1 (MQ=255)
atatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTg < 1:9905784/93‑1 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCtttcc > 1:7180548/1‑91 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc > 2:3302581/1‑93 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc < 2:2779190/93‑1 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc < 1:5960255/93‑1 (MQ=255)
atCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCt > 1:7788017/1‑93 (MQ=255)
atCGGGCAAATCCAGACGCTGGATCTGATTACCGCAAGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCt < 1:2750326/93‑1 (MQ=255)
tCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTc > 1:2782557/1‑93 (MQ=255)
gggCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTcgc < 2:2608118/93‑1 (MQ=255)
ggCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGGATATGCCCAGACCTTTGCTcgcg > 2:6915107/1‑93 (MQ=255)
gCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCgg < 2:111692/93‑1 (MQ=255)
gCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTAACCGGAATATGCCCAGACCTTTGCTCGCgg < 1:4381933/93‑1 (MQ=255)
cAAATCCAGACGCTGGATCTGGTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggg > 1:2003054/1‑92 (MQ=255)
cAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggt > 2:4401381/1‑93 (MQ=255)
aaaTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtg < 1:1899090/93‑1 (MQ=255)
aaTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtgg > 2:4752142/1‑93 (MQ=255)
aaTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtgg < 2:7422226/93‑1 (MQ=255)
aaTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtgg < 2:4024020/93‑1 (MQ=255)
aTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtggt < 1:3686692/93‑1 (MQ=255)
tCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTa < 2:10027307/93‑1 (MQ=255)
tCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTa > 1:4065433/1‑93 (MQ=255)
ccAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAc < 1:8587095/93‑1 (MQ=255)
cAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAcg < 2:7754857/93‑1 (MQ=255)
gACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAcgcg < 1:7894646/93‑1 (MQ=255)
cTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTtc < 2:3772346/93‑1 (MQ=255)
gATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCa < 1:7598218/93‑1 (MQ=255)
gATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCa > 1:579136/1‑93 (MQ=255)
gATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCa > 2:6299131/1‑93 (MQ=255)
gATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCa < 2:3402073/93‑1 (MQ=255)
aTCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAg > 2:4258844/1‑93 (MQ=255)
aTCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAg > 1:5873170/1‑93 (MQ=255)
tCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGt < 1:6009797/93‑1 (MQ=255)
tCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGt < 2:945241/93‑1 (MQ=255)
tCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGt > 2:3418773/1‑93 (MQ=255)
cTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTg < 2:1630227/93‑1 (MQ=255)
cTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTg < 1:1111932/93‑1 (MQ=255)
tGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTgg < 2:7131046/93‑1 (MQ=255)
tGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTgg > 1:2948806/1‑93 (MQ=255)
aTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTc > 1:7739942/1‑93 (MQ=255)
aTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTACTCAGTGGTc > 1:3173459/1‑93 (MQ=255)
tACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTcac > 1:8604643/1‑93 (MQ=255)
tACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTcac < 1:1935108/93‑1 (MQ=255)
tACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTcac > 1:7859579/1‑93 (MQ=255)
cgcacgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCATACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCAGAcc > 2:9747765/1‑93 (MQ=255)
cgcacgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACAcc > 2:1549838/1‑93 (MQ=255)
acgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCa > 1:8872101/1‑93 (MQ=255)
acgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATCCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCa > 2:4645221/1‑93 (MQ=255)
gcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCaaa > 1:1370804/1‑93 (MQ=255)
gcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCaaa < 1:8076021/93‑1 (MQ=255)
aaTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTTGTCACACCGCAAAtt > 1:8723324/1‑93 (MQ=255)
aaTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAtt > 2:8855123/1‑93 (MQ=255)
aaTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAtt > 2:7321878/1‑93 (MQ=255)
aTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAttt < 1:6420086/93‑1 (MQ=255)
tGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc < 2:5882821/93‑1 (MQ=255)
tGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc > 2:3901293/1‑93 (MQ=255)
agAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc < 2:7372543/92‑1 (MQ=255)
gAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCg > 1:124225/1‑93 (MQ=255)
gAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCg > 2:3579218/1‑93 (MQ=255)
gTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCa < 2:6972163/93‑1 (MQ=255)
tACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAg < 1:1474614/93‑1 (MQ=255)
cAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCt < 2:1081542/93‑1 (MQ=255)
aGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTg > 1:9462329/1‑93 (MQ=255)
ggCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTgg < 1:10015952/93‑1 (MQ=255)
ggCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTgg > 1:4737895/1‑93 (MQ=255)
cAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCg < 2:5419855/93‑1 (MQ=255)
aaaGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGt > 1:6170366/1‑93 (MQ=255)
aaGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGtt < 2:7287441/93‑1 (MQ=255)
aGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTg < 1:3493399/93‑1 (MQ=255)
gCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAg < 2:2710244/93‑1 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt > 2:2004146/1‑93 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt > 2:6263400/1‑93 (MQ=255)
tACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGCTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATc < 2:6202328/93‑1 (MQ=255)
aCTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCt < 1:3302871/93‑1 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt < 2:4528495/93‑1 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt < 2:247001/93‑1 (MQ=255)
ttACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGa < 1:6584738/93‑1 (MQ=255)
tACCCGGTATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGGATCTTGAt > 1:42800/1‑93 (MQ=255)
tACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAt > 1:4308391/1‑93 (MQ=255)
tACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAt > 1:229731/1‑93 (MQ=255)
aCCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATa > 1:8224157/1‑93 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc > 1:6911475/1‑93 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc > 2:7518406/1‑93 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc < 1:605903/93‑1 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCGTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc < 1:6777424/93‑1 (MQ=255)
ccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACt > 1:9184563/1‑93 (MQ=255)
cGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTa > 1:8477645/1‑93 (MQ=255)
ggAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAt > 1:1202608/1‑93 (MQ=255)
gAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtc > 1:1039325/1‑93 (MQ=255)
gAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtc > 2:6070907/1‑93 (MQ=255)
atatGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcct > 1:6095242/1‑93 (MQ=255)
tatGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcctc > 2:7925454/1‑93 (MQ=255)
|
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCC > NC_000913/1917500‑1917679
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC > NC_000913/1917497‑1917682
|
ATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTCCCCGGAATATGC > SRR4302540.2931408/1‑94 (MQ=60)
ATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGC > SRR4302540.6824298/1‑94 (MQ=60)
ATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGC > SRR4302540.9579949/1‑94 (MQ=60)
CTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC < SRR4302540.5442267/94‑1 (MQ=60)
CTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC > SRR4302540.8012869/1‑94 (MQ=60)
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCA < SRR4302540.7336747/94‑1 (MQ=60)
GTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGAC < SRR4302540.9725598/94‑1 (MQ=60)
TATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTNTACCCGGAATATGCCCAGACC > SRR4302540.1273293/1‑94 (MQ=60)
ATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCT > SRR4302540.2670476/1‑94 (MQ=60)
TTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTT < SRR4302540.7563560/94‑1 (MQ=60)
GATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTG < SRR4302540.8095308/94‑1 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC < SRR4302540.10021508/94‑1 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC > SRR4302540.763102/1‑94 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC < SRR4302540.6328907/94‑1 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTCC > SRR4302540.7260603/1‑94 (MQ=60)
TATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCT > SRR4302540.7879053/1‑94 (MQ=60)
TATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCT > SRR4302540.7879051/1‑94 (MQ=60)
TATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCT < SRR4302540.6026185/94‑1 (MQ=60)
TATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATAGGCCCAGACCTTTGCT > SRR4302540.3562974/1‑94 (MQ=60)
ATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGCCCTCTGCTC > SRR4302540.7897796/1‑94 (MQ=60)
ATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTC > SRR4302540.2812615/1‑94 (MQ=60)
ATCGGGCAAATCCAGACGCTGGATCTGATTACCGCAAGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTC < SRR4302540.2780045/94‑1 (MQ=60)
GCAAATCCAGACGCTGGATCTGGTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGG > SRR4302540.2024738/1‑94 (MQ=60)
GCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTAACCGGAATATGCCCAGACCTTTGCTCGCGGT < SRR4302540.4429516/94‑1 (MQ=60)
AAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGG < SRR4302540.1919867/94‑1 (MQ=60)
AATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGT > SRR4302540.8471015/1‑94 (MQ=60)
ATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTA > SRR4302540.4109259/1‑94 (MQ=60)
ATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTA < SRR4302540.3726972/94‑1 (MQ=60)
CCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACG < SRR4302540.8686918/94‑1 (MQ=60)
CCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACG > SRR4302540.9410348/1‑94 (MQ=60)
AGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCG > SRR4302540.9914354/1‑94 (MQ=60)
GACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGC < SRR4302540.7986766/94‑1 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTC > SRR4302540.6911810/1‑94 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTC > SRR4302540.6450321/1‑94 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTC > SRR4302540.7132972/1‑94 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTC > SRR4302540.6115071/1‑94 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTC < SRR4302540.628105/94‑1 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGGACGCGCTTC > SRR4302540.1924642/1‑94 (MQ=60)
GCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCGCGCGGTGGTACGCGCTTC > SRR4302540.1982257/1‑94 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA < SRR4302540.3899991/94‑1 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA > SRR4302540.2411934/1‑94 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA > SRR4302540.585406/1‑94 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA < SRR4302540.3257588/94‑1 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAG < SRR4302540.7683591/94‑1 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAG < SRR4302540.117821/94‑1 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAG > SRR4302540.5938090/1‑94 (MQ=60)
TCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTG > SRR4302540.4677045/1‑94 (MQ=60)
TCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTG < SRR4302540.6076438/94‑1 (MQ=60)
CTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGG > SRR4302540.9720295/1‑94 (MQ=60)
CTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGG < SRR4302540.1123444/94‑1 (MQ=60)
CTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGG > SRR4302540.2981259/1‑94 (MQ=60)
GATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTC > SRR4302540.7830306/1‑94 (MQ=60)
GATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTACTCAGTGGTC > SRR4302540.3207953/1‑94 (MQ=60)
TTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCAC > SRR4302540.7951416/1‑94 (MQ=60)
TTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCAC > SRR4302540.8704636/1‑94 (MQ=60)
TTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCAC > SRR4302540.8704637/1‑94 (MQ=60)
TACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACA < SRR4302540.1956192/94‑1 (MQ=60)
ACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACAC < SRR4302540.5976329/94‑1 (MQ=60)
CGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCG > SRR4302540.4402166/1‑94 (MQ=60)
GCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGC > SRR4302540.9277284/1‑94 (MQ=60)
CACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCA > SRR4302540.286210/1‑94 (MQ=60)
CACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCA > SRR4302540.8974776/1‑94 (MQ=60)
CGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAA > SRR4302540.1385331/1‑94 (MQ=60)
GCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAT < SRR4302540.8169741/94‑1 (MQ=60)
CAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTTGTCACACCGCAAATT > SRR4302540.8824616/1‑94 (MQ=60)
ATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTC < SRR4302540.6491542/94‑1 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG > SRR4302540.125546/1‑94 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG > SRR4302540.4198537/1‑94 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGGTTCTCAGTCGTCACACCGCACATTTCGGgt > SRR4302540.7870694/1‑92 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCA > SRR4302540.1216081/1‑94 (MQ=60)
GTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAG > SRR4302540.8843970/1‑94 (MQ=60)
TACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGC < SRR4302540.1490738/94‑1 (MQ=60)
ACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCT < SRR4302540.1821703/94‑1 (MQ=60)
CAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTG < SRR4302540.8705967/94‑1 (MQ=60)
CAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTG > SRR4302540.9574595/1‑94 (MQ=60)
AGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGG > SRR4302540.4788469/1‑94 (MQ=60)
GGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGC < SRR4302540.10132542/94‑1 (MQ=60)
GCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCG > SRR4302540.6178686/1‑94 (MQ=60)
CAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGT > SRR4302540.6239110/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302540.5871275/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302540.3456666/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302540.2315695/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302540.8006367/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302540.1440363/1‑94 (MQ=60)
AAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTG < SRR4302540.7757664/94‑1 (MQ=60)
AGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGA < SRR4302540.3531447/94‑1 (MQ=60)
AGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGA < SRR4302540.1060959/94‑1 (MQ=60)
GTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATC > SRR4302540.6513195/1‑94 (MQ=60)
GTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATC > SRR4302540.8592270/1‑94 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT < SRR4302540.3339034/94‑1 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT < SRR4302540.6036055/94‑1 (MQ=60)
CTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTG < SRR4302540.4343630/94‑1 (MQ=60)
TTACCCGGTATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGGATCTTGAT > SRR4302540.43240/1‑94 (MQ=60)
TTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAT < SRR4302540.6756801/94‑1 (MQ=60)
TTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAT < SRR4302540.6657675/94‑1 (MQ=60)
TTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAT > SRR4302540.4355290/1‑94 (MQ=60)
TTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAT > SRR4302540.231955/1‑94 (MQ=60)
TTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGAT < SRR4302540.8237235/94‑1 (MQ=60)
TACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATA > SRR4302540.8319764/1‑94 (MQ=60)
ACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAC > SRR4302540.6988373/1‑94 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT < SRR4302540.612383/94‑1 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT < SRR4302540.7333479/94‑1 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT > SRR4302540.9294712/1‑94 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCGTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT < SRR4302540.6852340/94‑1 (MQ=60)
CCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTA > SRR4302540.8576110/1‑94 (MQ=60)
CGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAT > SRR4302540.1214974/1‑94 (MQ=60)
CGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAT > SRR4302540.2800695/1‑94 (MQ=60)
GGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATC > SRR4302540.1049894/1‑94 (MQ=60)
GGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATC > SRR4302540.7440123/1‑94 (MQ=60)
GAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCC < SRR4302540.2723799/94‑1 (MQ=60)
AATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCT > SRR4302540.6163083/1‑94 (MQ=60)
ATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCA < SRR4302540.507273/94‑1 (MQ=60)
ATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCA > SRR4302540.9845826/1‑94 (MQ=60)
TGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAG < SRR4302540.2588222/94‑1 (MQ=60)
TGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAG < SRR4302540.7363274/94‑1 (MQ=60)
GCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC < SRR4302540.6042364/94‑1 (MQ=60)
|
ATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC > NC_000913/1917497‑1917682
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
