Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,984,492 A→G intergenic (‑341/‑456) araF ← / → yecI L‑arabinose‑binding periplasmic protein/ferritin‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,984,4920AG92.4% 1235.3 / 65.7 448intergenic (‑341/‑456)araF/yecIL‑arabinose‑binding periplasmic protein/ferritin‑like protein
Reads supporting (aligned to +/- strand):  ref base A (18/16);  new base G (213/200);  total (231/217)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 454 total aligned reads displayed.

CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTG  >  NC_000913/1984401‑1984583
                                                                                           |                                                                                           
 agATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGcc                                                                                           <  2:2520101/93‑1 (MQ=255)
  gATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTCACCAGTCAATAGGCCGCATTGCCt                                                                                          >  1:4888391/1‑93 (MQ=255)
  gATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCt                                                                                          >  1:4102978/1‑93 (MQ=255)
   aTTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTg                                                                                         <  1:3947301/93‑1 (MQ=255)
     tAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGc                                                                                       <  1:5813097/93‑1 (MQ=255)
       aTCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGt                                                                                     >  1:1809973/1‑93 (MQ=255)
        tCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGtt                                                                                    <  2:1892693/93‑1 (MQ=255)
        tCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGtt                                                                                    >  2:8272090/1‑93 (MQ=255)
          cATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGa                                                                                  >  1:8501923/1‑93 (MQ=255)
          cATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGa                                                                                  >  1:2259495/1‑93 (MQ=255)
          cATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGa                                                                                  <  1:5850731/93‑1 (MQ=255)
            tAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGt                                                                                >  2:2782208/1‑93 (MQ=255)
            tAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGt                                                                                >  1:7044282/1‑93 (MQ=255)
            tAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGt                                                                                >  2:6872906/1‑93 (MQ=255)
              aGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGTGTTGAGttt                                                                              >  2:1511030/1‑93 (MQ=255)
                aTTAGCCTGGAAATCCTTGCTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGttttt                                                                            <  1:9779081/93‑1 (MQ=255)
                 ttAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTg                                                                           >  1:4480897/1‑93 (MQ=255)
                    gCCTGCAAATGCTTGTTGTCTTTGGTACCCATGCGCGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGATTTTTTGaaa                                                                        <  1:8190578/93‑1 (MQ=255)
                      cTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATg                                                                      <  2:3627547/93‑1 (MQ=255)
                      cTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATg                                                                      >  1:5062640/1‑93 (MQ=255)
                      cTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATg                                                                      >  1:5404749/1‑93 (MQ=255)
                       tGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATgg                                                                     >  2:1995616/1‑93 (MQ=255)
                       tGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATgg                                                                     >  2:9190549/1‑93 (MQ=255)
                       tGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATgg                                                                     >  2:6612288/1‑93 (MQ=255)
                       tGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATgg                                                                     >  1:9884158/1‑93 (MQ=255)
                       tGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATgg                                                                     >  1:9012420/1‑93 (MQ=255)
                        ggAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgt                                                                    >  2:9548587/1‑93 (MQ=255)
                         gAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgtg                                                                   >  2:8934520/1‑93 (MQ=255)
                         gAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgtg                                                                   <  1:7404767/93‑1 (MQ=255)
                          aaaTCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGgtgt                                                                  <  2:5905949/93‑1 (MQ=255)
                           aaTCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGta                                                                 >  1:4256812/1‑93 (MQ=255)
                           aaTCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCAGTGCCTGGCGTTGAGTTTTTGAAATGGTGta                                                                 <  2:4295414/93‑1 (MQ=255)
                             tCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGtaat                                                               >  2:3350460/1‑93 (MQ=255)
                                ttgttgTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAc                                                            >  2:9379147/1‑93 (MQ=255)
                                ttgttgTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAAc                                                            <  2:8411749/93‑1 (MQ=255)
                                 tgttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAcc                                                           >  1:9288710/1‑93 (MQ=255)
                                 tgttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAcc                                                           <  2:8747007/93‑1 (MQ=255)
                                   ttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGc                                                         >  1:3016341/1‑93 (MQ=255)
                                      tCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAc                                                      <  1:1869115/93‑1 (MQ=255)
                                      tCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAc                                                      >  1:3724210/1‑93 (MQ=255)
                                        tttGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTc                                                    <  1:6756114/93‑1 (MQ=255)
                                         ttGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCa                                                   <  1:5165010/93‑1 (MQ=255)
                                             tACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGa                                               <  1:10007719/93‑1 (MQ=255)
                                             tACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGa                                               <  2:5476879/93‑1 (MQ=255)
                                              tcccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAt                                              <  2:4679974/92‑1 (MQ=255)
                                              aCCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAt                                              <  2:736700/93‑1 (MQ=255)
                                               cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg                                             <  2:3041869/93‑1 (MQ=255)
                                               cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg                                             >  1:4857480/1‑93 (MQ=255)
                                               cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAATTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg                                             >  2:8013233/1‑93 (MQ=255)
                                               cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg                                             <  2:2368021/93‑1 (MQ=255)
                                                 cATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtgtg                                           <  2:7648043/93‑1 (MQ=255)
                                                   tGCGGGTTGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGa                                         <  2:4569532/93‑1 (MQ=255)
                                                    gCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaa                                        <  1:7176636/93‑1 (MQ=255)
                                                      gggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaaaa                                      <  2:9766965/93‑1 (MQ=255)
                                                      gggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaaaa                                      <  1:2427551/93‑1 (MQ=255)
                                                      gggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaaaa                                      >  2:1049888/1‑93 (MQ=255)
                                                      gggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaaaa                                      >  1:9618788/1‑93 (MQ=255)
                                                       ggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAt                                     >  1:8394309/1‑93 (MQ=255)
                                                        gATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATg                                    <  1:3506572/93‑1 (MQ=255)
                                                        gATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATg                                    >  1:9179519/1‑93 (MQ=255)
                                                        gATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATg                                    <  2:6527002/93‑1 (MQ=255)
                                                        gATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATg                                    >  2:5674826/1‑93 (MQ=255)
                                                         aTGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGc                                   <  2:2932628/93‑1 (MQ=255)
                                                          tGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCa                                  <  2:7185961/93‑1 (MQ=255)
                                                           gTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAc                                 >  2:1193556/1‑93 (MQ=255)
                                                             cttcttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGt                               <  2:6961558/93‑1 (MQ=255)
                                                              ttcttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtc                              >  1:1613561/1‑93 (MQ=255)
                                                                cttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcat                            <  2:1601491/93‑1 (MQ=255)
                                                                cttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcat                            <  2:3217080/93‑1 (MQ=255)
                                                                 tttttAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcatt                           >  1:6327917/1‑93 (MQ=255)
                                                                  ttttAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcattc                          <  1:3141406/93‑1 (MQ=255)
                                                                  ttttAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcattc                          <  1:5223235/93‑1 (MQ=255)
                                                                  ttttAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcattc                          <  1:6551024/93‑1 (MQ=255)
                                                                     tAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTcattcatt                       >  2:1389243/1‑93 (MQ=255)
                                                                     tAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTcattcatt                       <  2:6383081/93‑1 (MQ=255)
                                                                      aaCCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCAttt                      <  1:1155036/93‑1 (MQ=255)
                                                                      aaCCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCAttt                      <  1:8329692/93‑1 (MQ=255)
                                                                        ccAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCg                    <  1:7852665/93‑1 (MQ=255)
                                                                         cAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGt                   <  1:3788298/93‑1 (MQ=255)
                                                                         cAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGt                   >  2:5213951/1‑93 (MQ=255)
                                                                          aGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAACGATGTGGAAAATGCACGTCATTCATTTCGTc                  >  2:605322/1‑93 (MQ=255)
                                                                          aGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTc                  >  1:6065458/1‑93 (MQ=255)
                                                                          aGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTc                  <  2:4020164/93‑1 (MQ=255)
                                                                            tCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCat                <  2:818517/93‑1 (MQ=255)
                                                                            tCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCat                <  1:7727988/93‑1 (MQ=255)
                                                                              aaTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCatta              <  1:4421233/93‑1 (MQ=255)
                                                                              aaTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGGGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCatta              >  1:2794463/1‑93 (MQ=255)
                                                                                tAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaat            >  1:6962266/1‑93 (MQ=255)
                                                                                  ggCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaatta          <  2:6105627/93‑1 (MQ=255)
                                                                                   gCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAt         <  1:2589963/93‑1 (MQ=255)
                                                                                   gCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAt         >  2:1717946/1‑93 (MQ=255)
                                                                                    ccGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATc        >  2:3483926/1‑93 (MQ=255)
                                                                                    ccGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATc        <  1:6816270/93‑1 (MQ=255)
                                                                                      gCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAc      >  1:6419278/1‑93 (MQ=255)
                                                                                      ccATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATACACGTCATTCATTTCGTCATTAATTATCAc      <  1:1454049/92‑1 (MQ=255)
                                                                                       cATTTCCTGGCTTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACt     <  2:750544/93‑1 (MQ=255)
                                                                                       cATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACt     <  2:4842550/93‑1 (MQ=255)
                                                                                       cATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACt     <  1:8058661/93‑1 (MQ=255)
                                                                                        aTTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACtg    >  2:4951724/1‑93 (MQ=255)
                                                                                        aTTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACtg    >  2:215020/1‑93 (MQ=255)
                                                                                           |                                                                                           
CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTG  >  NC_000913/1984401‑1984583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 245 total aligned reads displayed.
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT  >  NC_000913/1984399‑1984585
                                                                                             |                                                                                             
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTG                                                                                               >  SRR4302540.3285361/1‑94 (MQ=60)
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTG                                                                                               <  SRR4302540.2357087/94‑1 (MQ=60)
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTG                                                                                               >  SRR4302540.1260789/1‑94 (MQ=60)
  CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCC                                                                                             >  SRR4302540.1602232/1‑94 (MQ=60)
  CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACC                                                                                             <  SRR4302540.8840136/94‑1 (MQ=60)
  CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTATTCTTTTTAACCAGTCAATAGGCCGCATTGCC                                                                                             >  SRR4302540.5169954/1‑94 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTCACCAGTCAATAGGCCGCATTGCCT                                                                                            >  SRR4302540.4940927/1‑94 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            >  SRR4302540.796099/1‑94 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            >  SRR4302540.4147243/1‑94 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            >  SRR4302540.4147244/1‑94 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            <  SRR4302540.9201652/94‑1 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            <  SRR4302540.6200453/94‑1 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            <  SRR4302540.4521558/94‑1 (MQ=60)
   AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT                                                                                            >  SRR4302540.4940928/1‑94 (MQ=60)
    GATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTG                                                                                           >  SRR4302540.4614325/1‑94 (MQ=60)
    GATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTG                                                                                           <  SRR4302540.7256209/94‑1 (MQ=60)
     ATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGG                                                                                          <  SRR4302540.3989918/94‑1 (MQ=60)
       TAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCG                                                                                        <  SRR4302540.1060803/94‑1 (MQ=60)
        AATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGT                                                                                       >  SRR4302540.1829708/1‑94 (MQ=60)
        AATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGT                                                                                       >  SRR4302540.4337918/1‑94 (MQ=60)
         ATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTT                                                                                      <  SRR4302540.5290816/94‑1 (MQ=60)
         ATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTT                                                                                      <  SRR4302540.691719/94‑1 (MQ=60)
          TCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTG                                                                                     >  SRR4302540.7107767/1‑94 (MQ=60)
           CCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCACTAGGCCGCATTGCCTGGCGTTGA                                                                                    <  SRR4302540.1863437/94‑1 (MQ=60)
           CCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGA                                                                                    <  SRR4302540.5909793/94‑1 (MQ=60)
           CCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGA                                                                                    >  SRR4302540.8600719/1‑94 (MQ=60)
           CCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGA                                                                                    >  SRR4302540.8600721/1‑94 (MQ=60)
            CATAAGATTAGCCTGTAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAG                                                                                   <  SRR4302540.4159707/94‑1 (MQ=60)
            CATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAG                                                                                   >  SRR4302540.7921897/1‑94 (MQ=60)
            CATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAG                                                                                   <  SRR4302540.5915437/94‑1 (MQ=60)
             ATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGT                                                                                  >  SRR4302540.3400730/1‑94 (MQ=60)
             ATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGT                                                                                  >  SRR4302540.493034/1‑94 (MQ=60)
             ATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGT                                                                                  >  SRR4302540.8246350/1‑94 (MQ=60)
             ATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGT                                                                                  >  SRR4302540.7122606/1‑94 (MQ=60)
               AAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTT                                                                                <  SRR4302540.1932669/94‑1 (MQ=60)
               AAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTT                                                                                <  SRR4302540.4473040/94‑1 (MQ=60)
               AAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTT                                                                                <  SRR4302540.6378321/94‑1 (MQ=60)
                AGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTT                                                                               >  SRR4302540.9175378/1‑94 (MQ=60)
                 GATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTT                                                                              <  SRR4302540.2717173/94‑1 (MQ=60)
                  ATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTG                                                                             >  SRR4302540.215268/1‑94 (MQ=60)
                  ATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTG                                                                             >  SRR4302540.9874146/1‑94 (MQ=60)
                  ATTAGCCTGGAAATCCTTGTTGTCTTGGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTG                                                                             <  SRR4302540.9951166/94‑1 (MQ=60)
                  ATTAGCCTGGAAATCCTTGCTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTG                                                                             <  SRR4302540.9893703/94‑1 (MQ=60)
                   TTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGA                                                                            >  SRR4302540.7650723/1‑94 (MQ=60)
                   TTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGA                                                                            >  SRR4302540.10106420/1‑94 (MQ=60)
                    TAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAA                                                                           <  SRR4302540.6311772/94‑1 (MQ=60)
                     AGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAA                                                                          >  SRR4302540.3687091/1‑94 (MQ=60)
                      GCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAAT                                                                         <  SRR4302540.2863098/94‑1 (MQ=60)
                       CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG                                                                        >  SRR4302540.5464170/1‑94 (MQ=60)
                       CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG                                                                        <  SRR4302540.4740877/94‑1 (MQ=60)
                       CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG                                                                        >  SRR4302540.5117375/1‑94 (MQ=60)
                        CTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGTAATGG                                                                       >  SRR4302540.4021591/1‑94 (MQ=60)
                        CTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGG                                                                       >  SRR4302540.6484183/1‑94 (MQ=60)
                        CTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGG                                                                       >  SRR4302540.3379402/1‑94 (MQ=60)
                        CTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGG                                                                       >  SRR4302540.9120537/1‑94 (MQ=60)
                         TGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGT                                                                      >  SRR4302540.2809004/1‑94 (MQ=60)
                         TGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCAGCATTGCCTGGCGTTGAGTTTTTGAAATGGT                                                                      >  SRR4302540.8126105/1‑94 (MQ=60)
                          GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTG                                                                     >  SRR4302540.9856382/1‑94 (MQ=60)
                          GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTG                                                                     >  SRR4302540.9327324/1‑94 (MQ=60)
                           GAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGT                                                                    >  SRR4302540.6435333/1‑94 (MQ=60)
                           GAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGT                                                                    <  SRR4302540.7487264/94‑1 (MQ=60)
                           GAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGT                                                                    >  SRR4302540.2528331/1‑94 (MQ=60)
                            AAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTA                                                                   >  SRR4302540.4303125/1‑94 (MQ=60)
                            AAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTA                                                                   >  SRR4302540.2362386/1‑94 (MQ=60)
                             AATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAA                                                                  >  SRR4302540.5415645/1‑94 (MQ=60)
                             AATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAA                                                                  >  SRR4302540.8012048/1‑94 (MQ=60)
                              ATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGTTGTAAT                                                                 >  SRR4302540.3480843/1‑94 (MQ=60)
                               TCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATA                                                                <  SRR4302540.7515735/94‑1 (MQ=60)
                               TCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATA                                                                >  SRR4302540.1464720/1‑94 (MQ=60)
                               TCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATA                                                                <  SRR4302540.6612766/94‑1 (MQ=60)
                                CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAA                                                               <  SRR4302540.4101339/94‑1 (MQ=60)
                                CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAA                                                               >  SRR4302540.2502967/1‑94 (MQ=60)
                                CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAA                                                               >  SRR4302540.1062311/1‑94 (MQ=60)
                                CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAA                                                               <  SRR4302540.1871082/94‑1 (MQ=60)
                                CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAA                                                               >  SRR4302540.3674955/1‑94 (MQ=60)
                                 CTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAC                                                              >  SRR4302540.7819842/1‑94 (MQ=60)
                                  TTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACC                                                             <  SRR4302540.5575529/94‑1 (MQ=60)
                                  TTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACC                                                             <  SRR4302540.1878809/94‑1 (MQ=60)
                                  TTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACC                                                             >  SRR4302540.9399718/1‑94 (MQ=60)
                                   TGTTGTCTTTGGTACCCATGCGGGGTGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCG                                                            >  SRR4302540.5597499/1‑94 (MQ=60)
                                   TGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCG                                                            <  SRR4302540.8436493/94‑1 (MQ=60)
                                    GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC                                                           <  SRR4302540.492942/94‑1 (MQ=60)
                                    GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC                                                           >  SRR4302540.3049500/1‑94 (MQ=60)
                                    GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC                                                           <  SRR4302540.294333/94‑1 (MQ=60)
                                      TGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAA                                                         <  SRR4302540.10040279/94‑1 (MQ=60)
                                       GTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAC                                                        <  SRR4302540.7522663/94‑1 (MQ=60)
                                       GTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAC                                                        >  SRR4302540.8590828/1‑94 (MQ=60)
                                        TCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACT                                                       <  SRR4302540.6694443/94‑1 (MQ=60)
                                          TTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCA                                                     <  SRR4302540.483219/94‑1 (MQ=60)
                                          TTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCA                                                     >  SRR4302540.2873340/1‑94 (MQ=60)
                                          TTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCA                                                     <  SRR4302540.6830767/94‑1 (MQ=60)
                                           TTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAA                                                    <  SRR4302540.5221179/94‑1 (MQ=60)
                                            TGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAA                                                   <  SRR4302540.8166201/94‑1 (MQ=60)
                                              GTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGA                                                 >  SRR4302540.230155/1‑94 (MQ=60)
                                               TACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAT                                                <  SRR4302540.10124270/94‑1 (MQ=60)
                                                ACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATG                                               >  SRR4302540.4909554/1‑94 (MQ=60)
                                                ACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATG                                               >  SRR4302540.5155736/1‑94 (MQ=60)
                                                  CCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTG                                             >  SRR4302540.525749/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.379704/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.3661359/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.1703441/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.9946538/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.6650089/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.6888703/1‑94 (MQ=60)
                                                    ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA                                           >  SRR4302540.3818313/1‑94 (MQ=60)
                                                      GCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAA                                         <  SRR4302540.7256640/94‑1 (MQ=60)
                                                      GCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAA                                         >  SRR4302540.5909471/1‑94 (MQ=60)
                                                       CGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAA                                        >  SRR4302540.9964854/1‑94 (MQ=60)
                                                       CGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAA                                        >  SRR4302540.9732177/1‑94 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       <  SRR4302540.9486722/94‑1 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       >  SRR4302540.9441414/1‑94 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       <  SRR4302540.6878977/94‑1 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       <  SRR4302540.7377470/94‑1 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       >  SRR4302540.6471342/1‑94 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       <  SRR4302540.2453704/94‑1 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       >  SRR4302540.3762299/1‑94 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       >  SRR4302540.8491723/1‑94 (MQ=60)
                                                        GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT                                       >  SRR4302540.8491722/1‑94 (MQ=60)
                                                         GGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATG                                      >  SRR4302540.9289614/1‑94 (MQ=60)
                                                         GGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATG                                      >  SRR4302540.4924201/1‑94 (MQ=60)
                                                         GGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATG                                      >  SRR4302540.6899698/1‑94 (MQ=60)
                                                          GATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGC                                     <  SRR4302540.7170636/94‑1 (MQ=60)
                                                           GTGTCTTCTTTTTAACCAGTCAATAGGTCGCATTGTCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA                                    <  SRR4302540.8465989/94‑1 (MQ=60)
                                                           ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA                                    >  SRR4302540.5189146/1‑94 (MQ=60)
                                                           ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA                                    <  SRR4302540.6814370/94‑1 (MQ=60)
                                                           ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA                                    >  SRR4302540.8403638/1‑94 (MQ=60)
                                                           ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATaagcgctagatc                                    >  SRR4302540.8176123/1‑82 (MQ=60)
                                                            TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC                                   >  SRR4302540.98627/1‑94 (MQ=60)
                                                            TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC                                   >  SRR4302540.3082142/1‑94 (MQ=60)
                                                             GTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACG                                  <  SRR4302540.9315710/94‑1 (MQ=60)
                                                             GTCTTCTTTTTAACCAGTCAATAGGCAGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACG                                  >  SRR4302540.6045778/1‑94 (MQ=60)
                                                               CTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTC                                >  SRR4302540.1631270/1‑94 (MQ=60)
                                                                TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA                               >  SRR4302540.7065084/1‑94 (MQ=60)
                                                                TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA                               <  SRR4302540.209010/94‑1 (MQ=60)
                                                                TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA                               >  SRR4302540.5905528/1‑94 (MQ=60)
                                                                TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA                               <  SRR4302540.3537328/94‑1 (MQ=60)
                                                                 TCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCAT                              <  SRR4302540.8383340/94‑1 (MQ=60)
                                                                  atacgatcccgcaCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATT                             >  SRR4302540.5570164/14‑94 (MQ=60)
                                                                  CTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATT                             >  SRR4302540.6398382/1‑94 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           >  SRR4302540.7079137/1‑94 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           >  SRR4302540.10055835/1‑94 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           <  SRR4302540.3175657/94‑1 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           <  SRR4302540.3948386/94‑1 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           <  SRR4302540.1692966/94‑1 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           <  SRR4302540.2366242/94‑1 (MQ=60)
                                                                    TTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA                           <  SRR4302540.6623686/94‑1 (MQ=60)
                                                                      TTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATT                         <  SRR4302540.4410559/94‑1 (MQ=60)
                                                                      TTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATT                         <  SRR4302540.397437/94‑1 (MQ=60)
                                                                       TAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT                        <  SRR4302540.8266637/94‑1 (MQ=60)
                                                                       TAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT                        <  SRR4302540.9621256/94‑1 (MQ=60)
                                                                       TAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT                        >  SRR4302540.4394703/1‑94 (MQ=60)
                                                                       TAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT                        >  SRR4302540.1419609/1‑94 (MQ=60)
                                                                        AACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTC                       <  SRR4302540.8426372/94‑1 (MQ=60)
                                                                        AACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTC                       <  SRR4302540.1167058/94‑1 (MQ=60)
                                                                         ACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCG                      <  SRR4302540.783781/94‑1 (MQ=60)
                                                                         ACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCG                      <  SRR4302540.5229703/94‑1 (MQ=60)
                                                                         ACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCG                      <  SRR4302540.5229957/94‑1 (MQ=60)
                                                                         ACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCG                      <  SRR4302540.4494413/94‑1 (MQ=60)
                                                                          CCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGT                     <  SRR4302540.7944422/94‑1 (MQ=60)
                                                                          CCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGT                     >  SRR4302540.313209/1‑94 (MQ=60)
                                                                          CCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGT                     >  SRR4302540.6872109/1‑94 (MQ=60)
                                                                           CAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTC                    >  SRR4302540.2558149/1‑94 (MQ=60)
                                                                           CAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTC                    >  SRR4302540.5447866/1‑94 (MQ=60)
                                                                           CAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTC                    <  SRR4302540.3829604/94‑1 (MQ=60)
                                                                           CAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTC                    >  SRR4302540.6132887/1‑94 (MQ=60)
                                                                            AGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCA                   <  SRR4302540.8515387/94‑1 (MQ=60)
                                                                             GTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCAT                  >  SRR4302540.4274866/1‑94 (MQ=60)
                                                                             GTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCAT                  <  SRR4302540.5746687/94‑1 (MQ=60)
                                                                              TCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATT                 <  SRR4302540.7818197/94‑1 (MQ=60)
                                                                              TCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATT                 <  SRR4302540.730368/94‑1 (MQ=60)
                                                                               CAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTA                >  SRR4302540.8608601/1‑94 (MQ=60)
                                                                               CAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGGGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTA                >  SRR4302540.2824635/1‑94 (MQ=60)
                                                                                AATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAA               >  SRR4302540.8290550/1‑94 (MQ=60)
                                                                                 ATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAAT              <  SRR4302540.5953133/94‑1 (MQ=60)
                                                                                 ATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAAT              <  SRR4302540.5352078/94‑1 (MQ=60)
                                                                                 ATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAAT              >  SRR4302540.1782969/1‑94 (MQ=60)
                                                                                 ATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAAT              <  SRR4302540.3799875/94‑1 (MQ=60)
                                                                                  TAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATT             <  SRR4302540.6022456/94‑1 (MQ=60)
                                                                                    GGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAT           >  SRR4302540.3832188/1‑94 (MQ=60)
                                                                                    GGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAT           <  SRR4302540.4525736/94‑1 (MQ=60)
                                                                                    GGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAGGCACGTCATTCATTTCGTCATTAATTAT           <  SRR4302540.6943123/94‑1 (MQ=60)
                                                                                     GCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATC          <  SRR4302540.2617885/94‑1 (MQ=60)
                                                                                     GCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATC          <  SRR4302540.5019694/94‑1 (MQ=60)
                                                                                      CCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCA         >  SRR4302540.1493631/1‑94 (MQ=60)
                                                                                       CGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAC        <  SRR4302540.7030152/94‑1 (MQ=60)
                                                                                       CGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAC        <  SRR4302540.6500909/94‑1 (MQ=60)
                                                                                       CGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAC        >  SRR4302540.6490726/1‑94 (MQ=60)
                                                                                        GCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACT       <  SRR4302540.1195292/94‑1 (MQ=60)
                                                                                        GCATTGCCAGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACT       >  SRR4302540.7149971/1‑94 (MQ=60)
                                                                                        CCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATACACGTCATTCATTTCGTCATTAATTATCACT       <  SRR4302540.1469863/94‑1 (MQ=60)
                                                                                         CATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTG      >  SRR4302540.9332667/1‑94 (MQ=60)
                                                                                         CATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTG      >  SRR4302540.2239944/1‑94 (MQ=60)
                                                                                          ATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGT     >  SRR4302540.8273629/1‑94 (MQ=60)
                                                                                          ATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGT     >  SRR4302540.3143265/1‑94 (MQ=60)
                                                                                          ATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGT     >  SRR4302540.10016220/1‑94 (MQ=60)
                                                                                          ATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGT     <  SRR4302540.9996396/94‑1 (MQ=60)
                                                                                            TGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGC   >  SRR4302540.280367/1‑94 (MQ=60)
                                                                                            TGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGC   >  SRR4302540.6355933/1‑94 (MQ=60)
                                                                                             GCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT  <  SRR4302540.3456919/94‑1 (MQ=60)
                                                                                             GCCTGGCGTTGAGTTTTAGAAATGATGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT  <  SRR4302540.9081602/94‑1 (MQ=60)
                                                                                             |                                                                                             
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT  >  NC_000913/1984399‑1984585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑