Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,984,492 |
A→G |
intergenic (‑341/‑456) |
araF ← / → yecI |
L‑arabinose‑binding periplasmic protein/ferritin‑like protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,984,492 | 0 | A | G | 100.0%
| 689.1
/ NA
| 210 | intergenic (‑341/‑456) | araF/yecI | L‑arabinose‑binding periplasmic protein/ferritin‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (106/104); total (106/104) |
Only 100 of 211 total aligned reads displayed.
AGATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTG > NC_000913/1984402‑1984581
|
agATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGcc < 1:456247/93‑1 (MQ=255)
gATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCTATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCt < 2:1456492/93‑1 (MQ=255)
gATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCt < 1:6080348/93‑1 (MQ=255)
gATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCt > 1:5009423/1‑93 (MQ=255)
gATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCt > 1:1701285/1‑93 (MQ=255)
aTTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGTATTGCCTg < 1:2261356/93‑1 (MQ=255)
ttAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTgg < 2:4521005/93‑1 (MQ=255)
tAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGc < 2:1997648/93‑1 (MQ=255)
tAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGc > 2:6248910/1‑93 (MQ=255)
aTCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGt < 2:5253210/93‑1 (MQ=255)
tCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGtt > 2:6273639/1‑93 (MQ=255)
cATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGa < 1:1052917/93‑1 (MQ=255)
cATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGa > 2:3092003/1‑93 (MQ=255)
cATAAAGTTAGGCTGGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTg < 2:1103013/93‑1 (MQ=255)
aTAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAg < 2:5844008/93‑1 (MQ=255)
aTAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAg > 2:3881746/1‑93 (MQ=255)
aTAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAg > 2:1735580/1‑93 (MQ=255)
aTAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAg > 1:4244382/1‑93 (MQ=255)
tAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGt < 1:4948883/93‑1 (MQ=255)
tAACATTAGCCT‑GGAAATCCTTGTTGTCTTGGGTACCCATGCGGGATGTCTTCTTGTGAACCAGTCAATAGGCCGCATTGCCTGGCGTTCAGt < 2:5943349/93‑1 (MQ=255)
aGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGttt > 1:3773753/1‑93 (MQ=255)
gATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGtttt > 1:3675819/1‑93 (MQ=255)
gATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGtttt > 2:3696157/1‑93 (MQ=255)
aTTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGttttt < 2:2039140/93‑1 (MQ=255)
aGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGaa > 1:3876401/1‑93 (MQ=255)
gCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGaaa > 1:4311854/1‑93 (MQ=255)
gCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGaaa > 1:3172923/1‑93 (MQ=255)
ccT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAAt < 1:2692526/93‑1 (MQ=255)
cT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATg > 1:4192549/1‑93 (MQ=255)
t‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATgg < 1:4793198/93‑1 (MQ=255)
ggAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgt > 2:3225496/1‑93 (MQ=255)
ggAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgt < 2:1850834/93‑1 (MQ=255)
gAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgtg < 2:6239696/93‑1 (MQ=255)
aaaTCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGgtgt > 1:4811071/1‑93 (MQ=255)
tCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGtaat < 1:1942751/93‑1 (MQ=255)
cTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGtaataa > 1:5803977/1‑93 (MQ=255)
cTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGtaataa < 2:2607634/93‑1 (MQ=255)
cTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGtaataa > 1:1070929/1‑93 (MQ=255)
ttgttgTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAc > 1:6271968/1‑93 (MQ=255)
tgttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAcc < 2:3139289/93‑1 (MQ=255)
ttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCTTTGAGGTTTTGAAATGGTGTAATCACCGc > 1:2005421/1‑93 (MQ=255)
ttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGc > 1:1311382/1‑93 (MQ=255)
ttgtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGc < 2:3363438/93‑1 (MQ=255)
gtCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCaa < 1:5885355/93‑1 (MQ=255)
tCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAc < 1:2901195/93‑1 (MQ=255)
tCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAc < 2:1219898/93‑1 (MQ=255)
cTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACt < 2:912413/93‑1 (MQ=255)
tttGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTc > 1:5475675/1‑93 (MQ=255)
ggTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCaaa < 1:1497191/93‑1 (MQ=255)
ggTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCaaa < 2:4800678/93‑1 (MQ=255)
ggTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCaaa < 2:3120233/93‑1 (MQ=255)
tACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGa > 1:5425385/1‑93 (MQ=255)
tACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGa > 2:4918524/1‑93 (MQ=255)
cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg < 1:5954126/93‑1 (MQ=255)
cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg > 1:4533557/1‑93 (MQ=255)
cccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtg > 2:1513168/1‑93 (MQ=255)
ccATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtgt < 1:2480633/93‑1 (MQ=255)
cATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtgtg > 1:1579535/1‑93 (MQ=255)
cATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAtgtg > 2:2068108/1‑93 (MQ=255)
aTGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTgg > 1:5721928/1‑93 (MQ=255)
tGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGa < 2:2072141/93‑1 (MQ=255)
gggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGaaaa < 2:3570650/93‑1 (MQ=255)
ggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAt > 2:5006551/1‑93 (MQ=255)
ggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAt > 1:5515755/1‑93 (MQ=255)
ggATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAt < 2:3524193/93‑1 (MQ=255)
gATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATg < 2:4688713/93‑1 (MQ=255)
aTGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGc > 2:5087169/1‑93 (MQ=255)
aTGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGc > 2:5615620/1‑93 (MQ=255)
tGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCa > 1:4399051/1‑93 (MQ=255)
tGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCa < 1:4498688/93‑1 (MQ=255)
tGTCTTCATTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCa > 2:5988085/1‑93 (MQ=255)
gTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAc > 1:3511875/1‑93 (MQ=255)
tcttctTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACg < 1:1131375/93‑1 (MQ=255)
cttcttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGt < 1:4825156/93‑1 (MQ=255)
cttcttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGt > 2:3950316/1‑93 (MQ=255)
cttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcat < 2:5344717/93‑1 (MQ=255)
cttTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcat < 1:3696157/93‑1 (MQ=255)
tttttAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGtcatt > 1:3015757/1‑93 (MQ=255)
tAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTcattcatt < 1:3997924/93‑1 (MQ=255)
aaCCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCAttt < 2:241631/93‑1 (MQ=255)
aCCAGTCATTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGCAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTc > 1:1656379/1‑93 (MQ=255)
aCCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTc > 2:2812084/1‑93 (MQ=255)
ccAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCg > 2:510406/1‑93 (MQ=255)
gTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCa > 1:566911/1‑93 (MQ=255)
tCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCat < 1:2130106/93‑1 (MQ=255)
cAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCatt > 2:3754930/1‑93 (MQ=255)
aTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaa < 1:932315/93‑1 (MQ=255)
aTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaa > 2:3663868/1‑93 (MQ=255)
aTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaa > 2:2137951/1‑93 (MQ=255)
tAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaat < 1:4708859/93‑1 (MQ=255)
tAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaat < 2:2591173/93‑1 (MQ=255)
ggCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaatta > 1:2814861/1‑93 (MQ=255)
ggCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCattaatta < 1:5765819/93‑1 (MQ=255)
gCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAt > 1:613286/1‑93 (MQ=255)
gCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAt < 1:5330986/93‑1 (MQ=255)
ccGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATc > 2:4988244/1‑93 (MQ=255)
gCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAc > 1:830644/1‑93 (MQ=255)
gCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAc < 1:5199378/93‑1 (MQ=255)
cATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACt > 2:4102613/1‑93 (MQ=255)
aTTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACtg > 2:4258753/1‑93 (MQ=255)
|
AGATTAATCCATAAGATTAGCCT‑GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTG > NC_000913/1984402‑1984581
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT > NC_000913/1984399‑1984585
|
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTG < SRR4302533.878123/94‑1 (MQ=60)
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTG > SRR4302533.842853/1‑94 (MQ=60)
CAGATTAATCCATAAGATTAGCCTGGAAGTCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCC < SRR4302533.5950335/94‑1 (MQ=60)
CAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCC < SRR4302533.5910693/94‑1 (MQ=60)
AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT > SRR4302533.5039771/1‑94 (MQ=60)
AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT < SRR4302533.458973/94‑1 (MQ=60)
AGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCT > SRR4302533.1711596/1‑94 (MQ=60)
GATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTG < SRR4302533.6117120/94‑1 (MQ=60)
ATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGTATTGCCTGG < SRR4302533.2275342/94‑1 (MQ=60)
ATTAATCCATAAGATTAGCCTGGAAATCCTTGGTGTCTTTGGTACCCATGCGGGATGGCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGG < SRR4302533.3036252/94‑1 (MQ=60)
AATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGT > SRR4302533.6163240/1‑94 (MQ=60)
ATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTT > SRR4302533.4837038/1‑94 (MQ=60)
ATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTT > SRR4302533.3718418/1‑94 (MQ=60)
TCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTG < SRR4302533.2836456/94‑1 (MQ=60)
CATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAG < SRR4302533.1059119/94‑1 (MQ=60)
CATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAG > SRR4302533.4270011/1‑94 (MQ=60)
ATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGT > SRR4302533.4790962/1‑94 (MQ=60)
TAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTT < SRR4302533.4978852/94‑1 (MQ=60)
AAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTT > SRR4302533.3796886/1‑94 (MQ=60)
AGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTT > SRR4302533.3698409/1‑94 (MQ=60)
AGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTT > SRR4302533.5835400/1‑94 (MQ=60)
ATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTG > SRR4302533.2110552/1‑94 (MQ=60)
TTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGA > SRR4302533.2946556/1‑94 (MQ=60)
TTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGA < SRR4302533.247977/94‑1 (MQ=60)
TAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAA > SRR4302533.3900062/1‑94 (MQ=60)
AGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAA > SRR4302533.3192454/1‑94 (MQ=60)
AGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAA > SRR4302533.4337813/1‑94 (MQ=60)
GCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAAT < SRR4302533.3254115/94‑1 (MQ=60)
CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG < SRR4302533.4302778/94‑1 (MQ=60)
CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG < SRR4302533.2709027/94‑1 (MQ=60)
CCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATG > SRR4302533.4217925/1‑94 (MQ=60)
TGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGT < SRR4302533.1089641/94‑1 (MQ=60)
TGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGT < SRR4302533.4822238/94‑1 (MQ=60)
GGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTG < SRR4302533.1669459/94‑1 (MQ=60)
GAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGT > SRR4302533.4840230/1‑94 (MQ=60)
AATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAA > SRR4302533.3657911/1‑94 (MQ=60)
AATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAA < SRR4302533.147248/94‑1 (MQ=60)
ATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAAT < SRR4302533.4340050/94‑1 (MQ=60)
ATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAAT > SRR4302533.6194210/1‑94 (MQ=60)
TCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATA > SRR4302533.278856/1‑94 (MQ=60)
TCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATA < SRR4302533.1954604/94‑1 (MQ=60)
CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAA > SRR4302533.1077237/1‑94 (MQ=60)
CCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAA > SRR4302533.5839031/1‑94 (MQ=60)
CTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAAC > SRR4302533.6309432/1‑94 (MQ=60)
TGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCG < SRR4302533.4509794/94‑1 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCTTTGAGGTTTTGAAATGGTGTAATCACCGC > SRR4302533.2017771/1‑94 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC > SRR4302533.3665924/1‑94 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC > SRR4302533.1319255/1‑94 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC > SRR4302533.4843465/1‑94 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC > SRR4302533.2017769/1‑94 (MQ=60)
GTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGC > SRR4302533.1655495/1‑94 (MQ=60)
GTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAAC < SRR4302533.5920918/94‑1 (MQ=60)
TCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACT > SRR4302533.2041962/1‑94 (MQ=60)
TCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACT < SRR4302533.5030922/94‑1 (MQ=60)
TCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACT < SRR4302533.2919018/94‑1 (MQ=60)
CTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGCGTTTTTGAAATGGTGTAATAACCGCAACTC > SRR4302533.5733156/1‑94 (MQ=60)
CTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTC > SRR4302533.5508679/1‑94 (MQ=60)
CTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTC > SRR4302533.5478754/1‑94 (MQ=60)
TTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGGATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAA < SRR4302533.4243527/94‑1 (MQ=60)
GGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAG < SRR4302533.1506207/94‑1 (MQ=60)
GGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAG > SRR4302533.4527385/1‑94 (MQ=60)
GTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGA > SRR4302533.5776604/1‑94 (MQ=60)
GTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGA > SRR4302533.5458059/1‑94 (MQ=60)
TACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGAT < SRR4302533.6330030/94‑1 (MQ=60)
ACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATG > SRR4302533.4561008/1‑94 (MQ=60)
CCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGT < SRR4302533.226313/94‑1 (MQ=60)
CCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGT < SRR4302533.5990141/94‑1 (MQ=60)
CCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTG > SRR4302533.4666600/1‑94 (MQ=60)
CCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTG > SRR4302533.5568111/1‑94 (MQ=60)
CCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTG < SRR4302533.2495932/94‑1 (MQ=60)
CCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTG > SRR4302533.1589050/1‑94 (MQ=60)
CATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGG < SRR4302533.1292376/94‑1 (MQ=60)
CATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGG > SRR4302533.5756477/1‑94 (MQ=60)
ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA > SRR4302533.4489380/1‑94 (MQ=60)
ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA < SRR4302533.4201212/94‑1 (MQ=60)
ATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGA < SRR4302533.5045255/94‑1 (MQ=60)
GCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTCTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAA < SRR4302533.5315953/94‑1 (MQ=60)
GGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAAT > SRR4302533.5549053/1‑94 (MQ=60)
ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA > SRR4302533.514072/1‑94 (MQ=60)
ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA > SRR4302533.4425610/1‑94 (MQ=60)
ATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCA < SRR4302533.5430779/94‑1 (MQ=60)
TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC < SRR4302533.4525932/94‑1 (MQ=60)
TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC > SRR4302533.3788555/1‑94 (MQ=60)
TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC > SRR4302533.3533523/1‑94 (MQ=60)
TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC < SRR4302533.5522692/94‑1 (MQ=60)
TGTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCAC < SRR4302533.4583778/94‑1 (MQ=60)
GTCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACG > SRR4302533.3888592/1‑94 (MQ=60)
TCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGT < SRR4302533.5853349/94‑1 (MQ=60)
TCTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGT < SRR4302533.1138103/94‑1 (MQ=60)
CTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTC < SRR4302533.1075069/94‑1 (MQ=60)
CTTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTC < SRR4302533.4854385/94‑1 (MQ=60)
TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA > SRR4302533.1780103/1‑94 (MQ=60)
TTCTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCA > SRR4302533.5988096/1‑94 (MQ=60)
CTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATT > SRR4302533.3034202/1‑94 (MQ=60)
CTTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATT < SRR4302533.3718860/94‑1 (MQ=60)
TTTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTC > SRR4302533.2527956/1‑94 (MQ=60)
TTTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCA < SRR4302533.1550071/94‑1 (MQ=60)
TTTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCAT > SRR4302533.933998/1‑94 (MQ=60)
TTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATT < SRR4302533.5905880/94‑1 (MQ=60)
TTAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATT < SRR4302533.6103018/94‑1 (MQ=60)
TAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT < SRR4302533.4022265/94‑1 (MQ=60)
TAACCAGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTT > SRR4302533.4891669/1‑94 (MQ=60)
AACCAGTCATTAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGCAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTC > SRR4302533.1666403/1‑94 (MQ=60)
AGTCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCA > SRR4302533.570267/1‑94 (MQ=60)
TCAATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATT < SRR4302533.2143241/94‑1 (MQ=60)
ATAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAAT < SRR4302533.937787/94‑1 (MQ=60)
TAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATT < SRR4302533.392610/94‑1 (MQ=60)
TAGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATT < SRR4302533.4737398/94‑1 (MQ=60)
AGGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTA > SRR4302533.2832187/1‑94 (MQ=60)
GGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAT > SRR4302533.616891/1‑94 (MQ=60)
GGCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTAT < SRR4302533.5800628/94‑1 (MQ=60)
GCCGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATC < SRR4302533.5362937/94‑1 (MQ=60)
CGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAC > SRR4302533.835512/1‑94 (MQ=60)
CGCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGCGGAAAATGCACGTCATTCATTTCGTCATTAATTATCAC > SRR4302533.946705/1‑94 (MQ=60)
GCATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACT < SRR4302533.5230726/94‑1 (MQ=60)
ATTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGT > SRR4302533.3687861/1‑94 (MQ=60)
TTGCCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTG < SRR4302533.1186653/94‑1 (MQ=60)
GCCTGGCGTTGAGTTTTTGAAATGTTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT < SRR4302533.1209990/94‑1 (MQ=60)
|
AGCAGATTAATCCATAAGATTAGCCTGGAAATCCTTGTTGTCTTTGGTACCCATGCGGGATGTCTTCTTTTTAACCAGTCAATAGGCCGCATTACCTGGCGTTGAGTTTTTGAAATGGTGTAATAACCGCAACTCAAAGATGTGGAAAATGCACGTCATTCATTTCGTCATTAATTATCACTGTGCT > NC_000913/1984399‑1984585
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
