Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,008,480 +A coding (637/654 nt) yedK → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,008,4761.A99.2% 914.4 / ‑1.3 248coding (633/654 nt)yedKhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/2);  new base A (129/117);  total (129/119)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 277 total aligned reads displayed.

GCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008385‑2008563
                                                                                            |                                                                                        
gCGGTAAAGAAGCCCCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑a                                                                                         <  2:8543640/93‑1 (MQ=255)
  ggTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                       <  1:9736226/93‑1 (MQ=255)
  ggTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                       <  1:4883635/93‑1 (MQ=255)
   gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaa                                                                                      >  2:4069394/1‑93 (MQ=255)
   gTAAAGAAGCCGCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaa                                                                                      <  1:3467497/93‑1 (MQ=255)
     aaaGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaac                                                                                    >  1:1481207/1‑91 (MQ=255)
     aaaGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGGGGGTAATGTT‑aaaaac                                                                                    >  1:6242307/1‑91 (MQ=255)
      aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacc                                                                                   <  2:8597537/93‑4 (MQ=255)
      aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacc                                                                                   <  1:6208924/93‑4 (MQ=255)
      aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacc                                                                                   >  1:7110707/1‑90 (MQ=255)
      aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacc                                                                                   >  1:3654088/1‑90 (MQ=255)
      aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacc                                                                                   >  2:4556655/1‑90 (MQ=255)
       agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                  <  1:4453255/93‑5 (MQ=255)
       agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                  <  2:1008201/93‑5 (MQ=255)
          agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAggg                                                                               <  2:650992/93‑1 (MQ=255)
                 gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAg                                                                        >  1:1202200/1‑93 (MQ=255)
                 gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAg                                                                        >  1:1116605/1‑93 (MQ=255)
                 gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAg                                                                        >  2:3783141/1‑93 (MQ=255)
                    aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTa                                                                     <  2:4745749/93‑1 (MQ=255)
                    aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTa                                                                     >  1:4308372/1‑93 (MQ=255)
                     tCGCGGCTAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTaa                                                                    <  2:8356750/93‑1 (MQ=255)
                     aggcgGCCAGTTTCTGTGTTCCAGCAAACCATTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAGCCAGGGCGCGGAGTTaa                                                                    <  2:7949061/91‑1 (MQ=255)
                       gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAAtt                                                                  >  1:6660136/1‑93 (MQ=255)
                         ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCa                                                                >  1:9499667/1‑93 (MQ=255)
                          gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCaa                                                               <  1:816560/93‑1 (MQ=255)
                            cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAAcc                                                             <  1:5861355/93‑1 (MQ=255)
                            cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAAcc                                                             >  1:4033421/1‑93 (MQ=255)
                               tGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGt                                                          >  1:7984159/1‑93 (MQ=255)
                               tGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGt                                                          >  1:7495003/1‑93 (MQ=255)
                               tGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGt                                                          >  1:1152975/1‑93 (MQ=255)
                                    gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGAt                                                     >  2:2439372/1‑93 (MQ=255)
                                     tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATa                                                    <  1:8822606/93‑1 (MQ=255)
                                      gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                   <  2:2748912/93‑1 (MQ=255)
                                       ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg                                                  >  1:1807316/1‑93 (MQ=255)
                                        tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc                                                 <  1:8666073/93‑1 (MQ=255)
                                         ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                >  2:1902108/1‑93 (MQ=255)
                                         ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  2:5965849/93‑1 (MQ=255)
                                         ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:7064238/93‑1 (MQ=255)
                                            gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg                                             <  1:5088381/93‑1 (MQ=255)
                                             cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            <  2:6278119/93‑1 (MQ=255)
                                             cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            <  1:92002/93‑1 (MQ=255)
                                             cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            <  1:3031296/93‑1 (MQ=255)
                                               aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga                                          >  2:7916713/1‑93 (MQ=255)
                                                aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat                                         >  2:353562/1‑93 (MQ=255)
                                                aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat                                         <  2:7061001/93‑1 (MQ=255)
                                                 ccAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt                                        <  2:3269259/93‑1 (MQ=255)
                                                 ccAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt                                        >  1:830344/1‑93 (MQ=255)
                                                  cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta                                       <  1:5253075/93‑1 (MQ=255)
                                                   aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat                                      >  1:7597944/1‑93 (MQ=255)
                                                    ggtctcCTCGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     <  2:1590209/91‑1 (MQ=255)
                                                    gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     >  1:2738688/1‑93 (MQ=255)
                                                     ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    >  1:9115923/1‑93 (MQ=255)
                                                     ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    <  1:2191877/93‑1 (MQ=255)
                                                     gtctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    <  2:6777306/92‑1 (MQ=255)
                                                      tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGTTTATTGa                                   >  2:9262242/1‑93 (MQ=255)
                                                       ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                  <  2:9052739/93‑1 (MQ=255)
                                                          cTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGA‑AAGCCTGGAGATTATTGATcaaa                              >  2:7173842/1‑92 (MQ=255)
                                                          cTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGATAATTCAACCTGTTTGATAAGCCTAGAGATTATTAATcaa                               >  1:8458226/1‑93 (MQ=255)
                                                               aCCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          <  2:6674001/93‑1 (MQ=255)
                                                               aCCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          >  1:1961698/1‑93 (MQ=255)
                                                                cccGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc                         >  1:325577/1‑93 (MQ=255)
                                                                 ccGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt                        >  2:8157534/1‑93 (MQ=255)
                                                                  cGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       <  1:9347295/93‑1 (MQ=255)
                                                                  cGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  1:5518681/1‑93 (MQ=255)
                                                                  cGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  2:3503187/1‑93 (MQ=255)
                                                                  cGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  2:3503184/1‑93 (MQ=255)
                                                                  cGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  1:4586318/1‑93 (MQ=255)
                                                                   ggTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                      >  1:1335409/1‑93 (MQ=255)
                                                                   ggTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                      >  1:5608292/1‑93 (MQ=255)
                                                                    gTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                     >  2:2293191/1‑93 (MQ=255)
                                                                    gTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                     >  1:3595626/1‑93 (MQ=255)
                                                                     tATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt                    <  1:8586890/93‑1 (MQ=255)
                                                                     tATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt                    >  1:2843638/1‑93 (MQ=255)
                                                                     tATCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt                    <  1:2342658/93‑1 (MQ=255)
                                                                      aTCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                   <  1:1663694/93‑1 (MQ=255)
                                                                       tCGCGCGCGGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  2:6943175/1‑93 (MQ=255)
                                                                        cgcgcgcgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt                 <  1:1370120/93‑1 (MQ=255)
                                                                         gcgcgcgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATa                >  1:6893278/1‑93 (MQ=255)
                                                                             gcgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaa            <  2:8905307/93‑1 (MQ=255)
                                                                              cgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           >  2:9900893/1‑93 (MQ=255)
                                                                              cgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  2:4468420/93‑1 (MQ=255)
                                                                              cgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  2:9507162/93‑1 (MQ=255)
                                                                              cgGTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           >  2:2175175/1‑93 (MQ=255)
                                                                               ggTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt          <  1:5581267/93‑1 (MQ=255)
                                                                               ggTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt          >  2:8775591/1‑93 (MQ=255)
                                                                                gTGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc         <  2:9020251/93‑1 (MQ=255)
                                                                                 tGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct        >  2:5434228/1‑93 (MQ=255)
                                                                                 tGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct        >  1:657602/1‑93 (MQ=255)
                                                                                 tGGGTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct        <  2:1537224/93‑1 (MQ=255)
                                                                                  gtgTAATCTT‑AAAACCCAGGGCGCGTAGTTAATTCAACCTGTTTGATAAGCCTGGATATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  2:4941615/91‑1 (MQ=255)
                                                                                    gTAATGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa     >  2:8065217/1‑93 (MQ=255)
                                                                                      aaTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAGCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATCCTGCGTCATAAGAAATCTCTAtt   <  1:3038141/93‑1 (MQ=255)
                                                                                      aaTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt   <  2:1675636/93‑1 (MQ=255)
                                                                                      aaTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt   <  2:8450805/93‑1 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGCAATCTCTATTa  >  1:7155315/1‑93 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  <  2:7399170/93‑1 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  <  2:4104843/93‑1 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  2:201940/1‑93 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  1:4663359/1‑93 (MQ=255)
                                                                                       aTGTTAAAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  <  1:6058749/93‑1 (MQ=255)
                                                                                            |                                                                                        
GCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008385‑2008563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT  >  NC_000913/2008387‑2008573
                                                                                              |                                                                                               
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA                                                                                                 <  SRR4302540.9850538/94‑1 (MQ=60)
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA                                                                                                 <  SRR4302540.4936092/94‑1 (MQ=60)
 GTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑A                                                                                               <  SRR4302540.5217561/94‑1 (MQ=60)
 GTAAAGAAGCCGCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑A                                                                                               <  SRR4302540.3505249/94‑1 (MQ=60)
  TAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑AC                                                                                              >  SRR4302540.1497440/1‑94 (MQ=60)
  TAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGGGGGTAATGTT‑AAAA‑AC                                                                                              >  SRR4302540.6311778/1‑94 (MQ=60)
   AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAacc                                                                                              >  SRR4302540.7189847/1‑91 (MQ=60)
   AAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAAacc                                                                                              >  SRR4302540.3694110/1‑91 (MQ=60)
    AAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA                                                                                             <  SRR4302540.6278027/94‑1 (MQ=60)
    AAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA                                                                                             >  SRR4302540.3682201/1‑94 (MQ=60)
     AGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑G                                                                                           <  SRR4302540.4501530/94‑1 (MQ=60)
     AGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑G                                                                                           <  SRR4302540.335582/94‑1 (MQ=60)
     AGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑G                                                                                           <  SRR4302540.7651244/94‑1 (MQ=60)
      GAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GG                                                                                          >  SRR4302540.5624819/1‑94 (MQ=60)
      GAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GG                                                                                          <  SRR4302540.2262825/94‑1 (MQ=60)
          CCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGC                                                                                      <  SRR4302540.307612/94‑1 (MQ=60)
          CCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGC                                                                                      >  SRR4302540.865133/1‑94 (MQ=60)
          CCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGC                                                                                      >  SRR4302540.865132/1‑94 (MQ=60)
           CTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCG                                                                                     >  SRR4302540.8692317/1‑94 (MQ=60)
             CAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGG                                                                                   >  SRR4302540.5657758/1‑94 (MQ=60)
              AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAG                                                                                  >  SRR4302540.6160949/1‑94 (MQ=60)
              AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAG                                                                                  >  SRR4302540.1128184/1‑94 (MQ=60)
              AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAG                                                                                  >  SRR4302540.1214564/1‑94 (MQ=60)
              AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGAGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAG                                                                                  >  SRR4302540.291401/1‑94 (MQ=60)
                AAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTT                                                                                <  SRR4302540.3784929/94‑1 (MQ=60)
                 AATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTA                                                                               >  SRR4302540.4355270/1‑94 (MQ=60)
                 AATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTA                                                                               >  SRR4302540.4342216/1‑94 (MQ=60)
                  ATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAA                                                                              >  SRR4302540.9383962/1‑94 (MQ=60)
                  ATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAA                                                                              <  SRR4302540.1377593/94‑1 (MQ=60)
                   TCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAAT                                                                             <  SRR4302540.1184622/94‑1 (MQ=60)
                   TCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAAT                                                                             >  SRR4302540.7637835/1‑94 (MQ=60)
                    CGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATT                                                                            <  SRR4302540.2977918/94‑1 (MQ=60)
                    CGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATT                                                                            >  SRR4302540.6733775/1‑94 (MQ=60)
                      CGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCA                                                                          <  SRR4302540.3127648/94‑1 (MQ=60)
                      CGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCA                                                                          >  SRR4302540.9612237/1‑94 (MQ=60)
                        GCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAAC                                                                        <  SRR4302540.825233/94‑1 (MQ=60)
                         CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACC                                                                       >  SRR4302540.4076915/1‑94 (MQ=60)
                         CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACC                                                                       >  SRR4302540.3860037/1‑94 (MQ=60)
                         CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACC                                                                       >  SRR4302540.9286305/1‑94 (MQ=60)
                         CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACC                                                                       <  SRR4302540.1180373/94‑1 (MQ=60)
                          CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCT                                                                      <  SRR4302540.5926168/94‑1 (MQ=60)
                          CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCT                                                                      >  SRR4302540.3065807/1‑94 (MQ=60)
                          CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCT                                                                      <  SRR4302540.196422/94‑1 (MQ=60)
                           AGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTG                                                                     >  SRR4302540.2550323/1‑94 (MQ=60)
                            GTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGT                                                                    >  SRR4302540.8077140/1‑94 (MQ=60)
                            GTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGT                                                                    >  SRR4302540.7578716/1‑94 (MQ=60)
                            GTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGT                                                                    >  SRR4302540.1164979/1‑94 (MQ=60)
                             TGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTT                                                                   <  SRR4302540.7193774/94‑1 (MQ=60)
                              GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTT                                                                  >  SRR4302540.7214790/1‑94 (MQ=60)
                              GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTT                                                                  >  SRR4302540.1534876/1‑94 (MQ=60)
                              GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTT                                                                  >  SRR4302540.6676105/1‑94 (MQ=60)
                               GCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTG                                                                 >  SRR4302540.54381/1‑94 (MQ=60)
                                CTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGA                                                                >  SRR4302540.4495488/1‑94 (MQ=60)
                                 TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGAT                                                               <  SRR4302540.8819337/94‑1 (MQ=60)
                                 TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGAT                                                               <  SRR4302540.4595068/94‑1 (MQ=60)
                                   TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAA                                                             <  SRR4302540.8924626/94‑1 (MQ=60)
                                   TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAA                                                             >  SRR4302540.50084/1‑94 (MQ=60)
                                   TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAA                                                             <  SRR4302540.1455389/94‑1 (MQ=60)
                                    GTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAG                                                            <  SRR4302540.8058417/94‑1 (MQ=60)
                                    GTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAG                                                            >  SRR4302540.1827006/1‑94 (MQ=60)
                                     TTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGC                                                           <  SRR4302540.5611055/94‑1 (MQ=60)
                                      TCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCC                                                          <  SRR4302540.8766732/94‑1 (MQ=60)
                                      TCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCC                                                          >  SRR4302540.9486352/1‑94 (MQ=60)
                                       CCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCT                                                         <  SRR4302540.7142806/94‑1 (MQ=60)
                                        CAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGCGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTG                                                        >  SRR4302540.6302647/1‑94 (MQ=60)
                                         AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG                                                       >  SRR4302540.9256992/1‑94 (MQ=60)
                                         AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG                                                       <  SRR4302540.9620150/94‑1 (MQ=60)
                                          GCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGA                                                      <  SRR4302540.5143400/94‑1 (MQ=60)
                                           CAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑TCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATACGCCTGGAG                                                     >  SRR4302540.6291934/1‑94 (MQ=60)
                                           CAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAG                                                     <  SRR4302540.3064580/94‑1 (MQ=60)
                                           CAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAG                                                     <  SRR4302540.92971/94‑1 (MQ=60)
                                            AAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGA                                                    >  SRR4302540.2241461/1‑94 (MQ=60)
                                              ACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATT                                                  >  SRR4302540.839169/1‑94 (MQ=60)
                                               CCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTA                                                 <  SRR4302540.8197451/94‑1 (MQ=60)
                                               CCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTA                                                 >  SRR4302540.2060807/1‑94 (MQ=60)
                                                CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT                                                <  SRR4302540.7060994/94‑1 (MQ=60)
                                                CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT                                                >  SRR4302540.7683312/1‑94 (MQ=60)
                                                CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT                                                <  SRR4302540.5310375/94‑1 (MQ=60)
                                                CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT                                                <  SRR4302540.6472625/94‑1 (MQ=60)
                                                 AGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCACCCTGTTTGATAAGCCTGGAGATTATT                                               >  SRR4302540.2768250/1‑94 (MQ=60)
                                                 AGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATT                                               >  SRR4302540.2768249/1‑94 (MQ=60)
                                                  GTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTG                                              >  SRR4302540.9225493/1‑94 (MQ=60)
                                                   TTCTCCTGGCACCGGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA                                             <  SRR4302540.6829292/94‑1 (MQ=60)
                                                   TTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA                                             <  SRR4302540.2215549/94‑1 (MQ=60)
                                                   TTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA                                             >  SRR4302540.7411407/1‑94 (MQ=60)
                                                    TCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCCGTTTGATAAGCCTGGAGATTATTGAT                                            >  SRR4302540.625968/1‑94 (MQ=60)
                                                     CTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATC                                           >  SRR4302540.26382/1‑94 (MQ=60)
                                                     CTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATC                                           <  SRR4302540.5669396/94‑1 (MQ=60)
                                                      TCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCA                                          <  SRR4302540.1344252/94‑1 (MQ=60)
                                                       CCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAA                                         >  SRR4302540.8471823/1‑94 (MQ=60)
                                                       CCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGATAATTCAACCTGTTTGATAAGCCTAGAGATTATTAATCAA                                         >  SRR4302540.8556434/1‑94 (MQ=60)
                                                        CTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAAC                                        <  SRR4302540.633603/94‑1 (MQ=60)
                                                         TGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACA                                       <  SRR4302540.86894/94‑1 (MQ=60)
                                                          GGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAA                                      <  SRR4302540.5911486/94‑1 (MQ=60)
                                                           GCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAAT                                     <  SRR4302540.10045787/94‑1 (MQ=60)
                                                            CACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATA                                    <  SRR4302540.40804/94‑1 (MQ=60)
                                                            CACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATA                                    >  SRR4302540.1983014/1‑94 (MQ=60)
                                                             ACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAC                                   >  SRR4302540.328841/1‑94 (MQ=60)
                                                              CCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACT                                  >  SRR4302540.7023895/1‑94 (MQ=60)
                                                              CCCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACT                                  >  SRR4302540.1280144/1‑94 (MQ=60)
                                                               CCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTG                                 >  SRR4302540.5579465/1‑94 (MQ=60)
                                                               CCGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTG                                 >  SRR4302540.4635719/1‑94 (MQ=60)
                                                                CGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGC                                >  SRR4302540.5669993/1‑94 (MQ=60)
                                                                CGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGC                                >  SRR4302540.1349386/1‑94 (MQ=60)
                                                                CGGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGC                                <  SRR4302540.9458642/94‑1 (MQ=60)
                                                                 GGTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG                               >  SRR4302540.3634916/1‑94 (MQ=60)
                                                                  GTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGT                              >  SRR4302540.2874407/1‑94 (MQ=60)
                                                                  GTATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGT                              >  SRR4302540.2874408/1‑94 (MQ=60)
                                                                   TATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC                             <  SRR4302540.1877352/94‑1 (MQ=60)
                                                                   TATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC                             <  SRR4302540.2367899/94‑1 (MQ=60)
                                                                   TATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC                             <  SRR4302540.8686712/94‑1 (MQ=60)
                                                                   TATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC                             <  SRR4302540.9005903/94‑1 (MQ=60)
                                                                   TATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC                             <  SRR4302540.9536200/94‑1 (MQ=60)
                                                                    ATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCA                            <  SRR4302540.1368813/94‑1 (MQ=60)
                                                                    ATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCA                            <  SRR4302540.4474057/94‑1 (MQ=60)
                                                                    ATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCA                            >  SRR4302540.1739519/1‑94 (MQ=60)
                                                                    ATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCA                            <  SRR4302540.1681812/94‑1 (MQ=60)
                                                                    ATCGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCA                            <  SRR4302540.1681813/94‑1 (MQ=60)
                                                                      CGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATA                          >  SRR4302540.6969758/1‑94 (MQ=60)
                                                                      CGCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATA                          <  SRR4302540.1384638/94‑1 (MQ=60)
                                                                       GCGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAA                         >  SRR4302540.9853351/1‑94 (MQ=60)
                                                                        CGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGGTCAACAATACTGCGTCATAAG                        >  SRR4302540.4859872/1‑94 (MQ=60)
                                                                        CGCGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAG                        <  SRR4302540.8228496/94‑1 (MQ=60)
                                                                          CGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAA                      <  SRR4302540.349945/94‑1 (MQ=60)
                                                                          CGCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAA                      <  SRR4302540.9216837/94‑1 (MQ=60)
                                                                           GCGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAA                     <  SRR4302540.1624817/94‑1 (MQ=60)
                                                                            CGGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAT                    >  SRR4302540.1158395/1‑94 (MQ=60)
                                                                            CGGTGGGTAATGTT‑AAAACCCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAT                    <  SRR4302540.8514776/94‑1 (MQ=60)
                                                                             GGTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATC                   <  SRR4302540.5642705/94‑1 (MQ=60)
                                                                              GTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT                  >  SRR4302540.664616/1‑94 (MQ=60)
                                                                              GTGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT                  >  SRR4302540.6920887/1‑94 (MQ=60)
                                                                               TGGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTC                 >  SRR4302540.4848576/1‑94 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                >  SRR4302540.608044/1‑94 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                >  SRR4302540.2234950/1‑94 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                <  SRR4302540.5305830/94‑1 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                <  SRR4302540.8333390/94‑1 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                >  SRR4302540.4708801/1‑94 (MQ=60)
                                                                                GGGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT                <  SRR4302540.3600989/94‑1 (MQ=60)
                                                                                 GGTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTA               >  SRR4302540.5073337/1‑94 (MQ=60)
                                                                                  GTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT              <  SRR4302540.5919272/94‑1 (MQ=60)
                                                                                  GTAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT              <  SRR4302540.7803449/94‑1 (MQ=60)
                                                                                   TAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCCACCTGTTTGATAAGCCTGGAGAATATTGATCAACAATACTGCGTCATAAGAAATCTCTATT             >  SRR4302540.7189689/1‑94 (MQ=60)
                                                                                   TAATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATT             >  SRR4302540.7189688/1‑94 (MQ=60)
                                                                                    AATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAGCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATCCTGCGTCATAAGAAATCTCTATTA            <  SRR4302540.3071486/94‑1 (MQ=60)
                                                                                    AATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGCAATCTCTATTA            >  SRR4302540.7235063/1‑94 (MQ=60)
                                                                                    AATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA            <  SRR4302540.9423037/94‑1 (MQ=60)
                                                                                    AATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA            >  SRR4302540.4713276/1‑94 (MQ=60)
                                                                                    AATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA            >  SRR4302540.4713277/1‑94 (MQ=60)
                                                                                     ATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGACATCTCTATTAG           >  SRR4302540.434340/1‑94 (MQ=60)
                                                                                     ATGTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG           <  SRR4302540.6126087/94‑1 (MQ=60)
                                                                                       GTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC         <  SRR4302540.7689939/94‑1 (MQ=60)
                                                                                       GTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC         <  SRR4302540.7438859/94‑1 (MQ=60)
                                                                                       GTTAAAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC         <  SRR4302540.1636030/94‑1 (MQ=60)
                                                                                        TA‑AAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAA       >  SRR4302540.20261/1‑94 (MQ=60)
                                                                                         A‑AAAA‑CCA‑GGGCGCGTAGTTAATTCACCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAA      <  SRR4302540.5889549/94‑1 (MQ=60)
                                                                                         A‑AAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAA      >  SRR4302540.1576381/1‑94 (MQ=60)
                                                                                           AAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAG     >  SRR4302540.540244/1‑94 (MQ=60)
                                                                                             AA‑CCAGGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGA    <  SRR4302540.8376087/94‑1 (MQ=60)
                                                                                             AA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT   <  SRR4302540.7156065/94‑1 (MQ=60)
                                                                                             AA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT   <  SRR4302540.3023920/94‑1 (MQ=60)
                                                                                             AA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGAT   >  SRR4302540.8690645/1‑94 (MQ=60)
                                                                                              A‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT  <  SRR4302540.2715444/94‑1 (MQ=60)
                                                                                              |                                                                                               
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAA‑CCA‑GGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGATT  >  NC_000913/2008387‑2008573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑