Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,008,480 |
+A |
coding (637/654 nt) |
yedK → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,008,476 | 1 | . | A | 99.4%
| 652.9
/ ‑4.0
| 175 | coding (633/654 nt) | yedK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (76/98); total (76/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 188 total aligned reads displayed.
AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA > NC_000913/2008384‑2008563
|
aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGt‑t < 1:4309157/93‑1 (MQ=255)
aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGt‑t < 2:2016368/93‑1 (MQ=255)
ggTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaa > 2:861351/1‑93 (MQ=255)
gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaa < 1:2278045/93‑1 (MQ=255)
gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaa > 1:2994001/1‑93 (MQ=255)
aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaacc > 2:923783/1‑90 (MQ=255)
agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑aaaaacca > 2:5475755/1‑89 (MQ=255)
aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAgg < 1:1544011/93‑1 (MQ=255)
agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCAGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAggg < 2:1069281/93‑1 (MQ=255)
gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGgc < 2:3278675/93‑1 (MQ=255)
gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGgc < 1:4513529/93‑1 (MQ=255)
cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGgcgc > 2:2579022/1‑93 (MQ=255)
tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGcgcg > 1:4572664/1‑93 (MQ=255)
tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGcgcg > 2:2429389/1‑93 (MQ=255)
tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGcgcg > 2:3129718/1‑93 (MQ=255)
tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGcgcg < 1:611476/93‑1 (MQ=255)
aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGa > 1:4039853/1‑93 (MQ=255)
gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAg > 2:2849869/1‑93 (MQ=255)
gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAg > 2:4792104/1‑93 (MQ=255)
gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAg > 2:6242533/1‑93 (MQ=255)
gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAg > 1:1075822/1‑93 (MQ=255)
aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGt < 2:1171774/93‑1 (MQ=255)
aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGt < 2:4761917/93‑1 (MQ=255)
gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAAtt > 2:408513/1‑93 (MQ=255)
ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCa > 2:2978722/1‑93 (MQ=255)
ccAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAAc < 1:3150120/93‑1 (MQ=255)
aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCt < 1:4206599/93‑1 (MQ=255)
gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt > 2:3891078/1‑93 (MQ=255)
cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTg < 2:4631103/93‑1 (MQ=255)
cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTg > 1:5681286/1‑93 (MQ=255)
cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTg < 2:5712135/93‑1 (MQ=255)
gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAt > 1:2112113/1‑93 (MQ=255)
tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa < 2:729554/93‑1 (MQ=255)
tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa < 1:4141917/93‑1 (MQ=255)
tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa < 2:3130/93‑1 (MQ=255)
tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa > 2:491140/1‑93 (MQ=255)
gtTCCAGCAAACCAGTTCTCCTGGCACCTGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa < 1:1058539/93‑1 (MQ=255)
gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa > 2:1517670/1‑93 (MQ=255)
gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa < 1:4494759/93‑1 (MQ=255)
ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg > 2:231820/1‑93 (MQ=255)
tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc < 2:1854651/93‑1 (MQ=255)
ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc < 2:1397754/93‑1 (MQ=255)
cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCt > 1:3214613/1‑93 (MQ=255)
aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg > 2:3484139/1‑93 (MQ=255)
aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg > 1:2318134/1‑93 (MQ=255)
aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg < 1:1369516/93‑1 (MQ=255)
aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGAAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg > 1:4438273/1‑93 (MQ=255)
cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga < 1:2780906/93‑1 (MQ=255)
aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat < 2:2936624/93‑1 (MQ=255)
aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat < 2:1698204/93‑1 (MQ=255)
ccAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt > 2:46758/1‑93 (MQ=255)
cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta > 1:5810885/1‑93 (MQ=255)
ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg < 2:4184833/93‑1 (MQ=255)
tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa < 2:4248994/93‑1 (MQ=255)
ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt < 2:652616/93‑1 (MQ=255)
ccTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATca > 1:2639348/1‑93 (MQ=255)
cTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaa > 1:2699740/1‑93 (MQ=255)
tGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaac < 1:5580042/93‑1 (MQ=255)
gCACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa < 2:4601552/93‑1 (MQ=255)
cACCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAAt < 2:3221155/93‑1 (MQ=255)
aCCCGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa > 1:57678/1‑93 (MQ=255)
cccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc > 1:3653312/1‑93 (MQ=255)
cccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc > 1:392824/1‑93 (MQ=255)
cccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc < 2:4867315/93‑1 (MQ=255)
ccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt > 1:4727871/1‑93 (MQ=255)
ccGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt > 1:3457583/1‑93 (MQ=255)
cGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg > 1:2353674/1‑93 (MQ=255)
cGGTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg > 2:3728753/1‑93 (MQ=255)
ggTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAGCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc < 2:4313779/93‑1 (MQ=255)
ggTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc < 1:4887627/93‑1 (MQ=255)
gTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg > 1:5374134/1‑93 (MQ=255)
gTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg > 2:5027218/1‑93 (MQ=255)
gTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg > 2:4480703/1‑93 (MQ=255)
gTATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg < 1:1146810/93‑1 (MQ=255)
tATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt < 1:4226683/93‑1 (MQ=255)
tATCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt < 1:4159430/93‑1 (MQ=255)
aTCGCGCGCGGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc < 2:4929466/93‑1 (MQ=255)
cgcgcgcgGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt < 1:3338201/93‑1 (MQ=255)
gcgcgcgGTGCGTAATGTGA‑AAAACCAGGGCGCGGAGTTAATTCATCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATa < 2:398073/93‑1 (MQ=255)
cgcgcgGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATGAACAATACTGCGTCATaa > 2:5992965/1‑93 (MQ=255)
cgGTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa < 1:973990/93‑1 (MQ=255)
ggTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt < 1:1704564/93‑1 (MQ=255)
ggTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt > 1:6283603/1‑93 (MQ=255)
gTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc > 1:3905418/1‑93 (MQ=255)
gTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc < 1:4600368/93‑1 (MQ=255)
gTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc < 2:2364657/93‑1 (MQ=255)
gTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc < 2:1602779/93‑1 (MQ=255)
gTGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc > 1:852694/1‑93 (MQ=255)
tGGGTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct > 2:2737337/1‑93 (MQ=255)
gggTAATGT‑TAAAAACTAGGGCGCGGCGGTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATTAAGAATAACGAGTGAAAAGAAAtatc > 2:4370631/1‑93 (MQ=255)
gggTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc > 2:4976078/1‑93 (MQ=255)
gggTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc > 1:314431/1‑93 (MQ=255)
gTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa < 1:5665271/93‑1 (MQ=255)
gTAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTa < 2:1230642/93‑1 (MQ=255)
tAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt < 1:5233278/93‑1 (MQ=255)
tAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt < 1:5557399/93‑1 (MQ=255)
tAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt < 2:5311697/93‑1 (MQ=255)
tAATGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt > 1:370759/1‑93 (MQ=255)
aaTGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTACGTCATAAGAAATCTCTAtt > 2:5419184/1‑93 (MQ=255)
aTGT‑TAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa > 1:2922016/1‑93 (MQ=255)
|
AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGT‑T‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA > NC_000913/2008384‑2008563
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGA > NC_000913/2008387‑2008571
|
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAA > SRR4302533.3012307/1‑94 (MQ=60)
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAA > SRR4302533.3826124/1‑94 (MQ=60)
GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAA > SRR4302533.4003931/1‑94 (MQ=60)
GTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAAA < SRR4302533.2292152/94‑1 (MQ=60)
AGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAG > SRR4302533.2227537/1‑94 (MQ=60)
GAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGG < SRR4302533.1137235/94‑1 (MQ=60)
GAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGG < SRR4302533.438322/94‑1 (MQ=60)
ACGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGG < SRR4302533.2617716/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGG < SRR4302533.1553311/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGG < SRR4302533.2214589/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGG < SRR4302533.1148384/94‑1 (MQ=60)
AAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGG < SRR4302533.688231/94‑1 (MQ=60)
AGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGC > SRR4302533.4525842/1‑94 (MQ=60)
GCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCG < SRR4302533.4540863/94‑1 (MQ=60)
GCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCG < SRR4302533.5692449/94‑1 (MQ=60)
CTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCG > SRR4302533.4600376/1‑94 (MQ=60)
CTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCG < SRR4302533.1299353/94‑1 (MQ=60)
CTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCG > SRR4302533.2660792/1‑94 (MQ=60)
TCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGG < SRR4302533.615071/94‑1 (MQ=60)
CAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGA > SRR4302533.4064438/1‑94 (MQ=60)
AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAG > SRR4302533.3945074/1‑94 (MQ=60)
AGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAG > SRR4302533.1082163/1‑94 (MQ=60)
CGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCA < SRR4302533.4110518/94‑1 (MQ=60)
CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACC < SRR4302533.158689/94‑1 (MQ=60)
CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACC < SRR4302533.5080268/94‑1 (MQ=60)
CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACC < SRR4302533.3169490/94‑1 (MQ=60)
CCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACC < SRR4302533.5815540/94‑1 (MQ=60)
CAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCT < SRR4302533.3114634/94‑1 (MQ=60)
AGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTG < SRR4302533.4232046/94‑1 (MQ=60)
TGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTT < SRR4302533.4188970/94‑1 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTT < SRR4302533.5501451/94‑1 (MQ=60)
GGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGCGGGAACTGTT‑ACAAACCAGGGCGCGGAGTatattcaaactgtgt > SRR4302533.1102155/1‑79 (MQ=60)
GCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTG > SRR4302533.5715602/1‑94 (MQ=60)
TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAT > SRR4302533.4801968/1‑94 (MQ=60)
TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAT > SRR4302533.2125142/1‑94 (MQ=60)
TGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAT < SRR4302533.449017/94‑1 (MQ=60)
GTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATA > SRR4302533.4248024/1‑94 (MQ=60)
TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAA < SRR4302533.4566285/94‑1 (MQ=60)
TGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAA < SRR4302533.4167033/94‑1 (MQ=60)
GTTCCAGCAAACCAGTTCTCCTGGCACCTGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAG < SRR4302533.1064765/94‑1 (MQ=60)
GTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAG < SRR4302533.4521978/94‑1 (MQ=60)
CCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCT > SRR4302533.2921423/1‑94 (MQ=60)
CCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCT > SRR4302533.3234432/1‑94 (MQ=60)
CCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCT < SRR4302533.5784408/94‑1 (MQ=60)
CAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTG > SRR4302533.2332484/1‑94 (MQ=60)
CAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGAAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTG > SRR4302533.4465102/1‑94 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG < SRR4302533.5601891/94‑1 (MQ=60)
AGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGG < SRR4302533.1377747/94‑1 (MQ=60)
CAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAG < SRR4302533.2797989/94‑1 (MQ=60)
AAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGA > SRR4302533.2964904/1‑94 (MQ=60)
CCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTA > SRR4302533.5845977/1‑94 (MQ=60)
CAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTAT < SRR4302533.4312950/94‑1 (MQ=60)
AGTTCTCCTGGCACACGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATT < SRR4302533.2322485/94‑1 (MQ=60)
TGCTCCTGGCATCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGA < SRR4302533.964747/94‑1 (MQ=60)
TCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCA > SRR4302533.2655571/1‑94 (MQ=60)
CCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAA > SRR4302533.2716303/1‑94 (MQ=60)
TGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACA < SRR4302533.5613764/94‑1 (MQ=60)
CACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATA > SRR4302533.4714675/1‑94 (MQ=60)
CACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATA > SRR4302533.58060/1‑94 (MQ=60)
ACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAC > SRR4302533.395207/1‑94 (MQ=60)
ACCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAC > SRR4302533.3675776/1‑94 (MQ=60)
CCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACT > SRR4302533.4756533/1‑94 (MQ=60)
CCCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACT > SRR4302533.3478929/1‑94 (MQ=60)
CCGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTG > SRR4302533.2368229/1‑94 (MQ=60)
CGGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGC < SRR4302533.3381637/94‑1 (MQ=60)
GGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG > SRR4302533.5406428/1‑94 (MQ=60)
GGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG < SRR4302533.4917240/94‑1 (MQ=60)
GGTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCG < SRR4302533.6096889/94‑1 (MQ=60)
GTATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGT < SRR4302533.1153655/94‑1 (MQ=60)
TATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC < SRR4302533.4184637/94‑1 (MQ=60)
TATCGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTC < SRR4302533.4252242/94‑1 (MQ=60)
CGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATA < SRR4302533.5300781/94‑1 (MQ=60)
CGCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATA < SRR4302533.3358835/94‑1 (MQ=60)
GCGCGCGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAA < SRR4302533.316499/94‑1 (MQ=60)
CGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAT > SRR4302533.6321098/1‑94 (MQ=60)
CGGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAT < SRR4302533.979709/94‑1 (MQ=60)
GGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATC > SRR4302533.857686/1‑94 (MQ=60)
GGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATC < SRR4302533.1714888/94‑1 (MQ=60)
GGTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATC > SRR4302533.3929269/1‑94 (MQ=60)
GTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT > SRR4302533.1488145/1‑94 (MQ=60)
GTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT < SRR4302533.4628237/94‑1 (MQ=60)
GTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT < SRR4302533.3349618/94‑1 (MQ=60)
GTGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCT < SRR4302533.3667653/94‑1 (MQ=60)
TGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTC > SRR4302533.316352/1‑94 (MQ=60)
TGGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTC > SRR4302533.371999/1‑94 (MQ=60)
GGGTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCT < SRR4302533.2759214/94‑1 (MQ=60)
GTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT < SRR4302533.6165689/94‑1 (MQ=60)
GTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT < SRR4302533.5699499/94‑1 (MQ=60)
GTAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAT > SRR4302533.372997/1‑94 (MQ=60)
TAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATT < SRR4302533.5590984/94‑1 (MQ=60)
TAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATT > SRR4302533.1997790/1‑94 (MQ=60)
TAATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATT < SRR4302533.5264750/94‑1 (MQ=60)
AATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA > SRR4302533.2939909/1‑94 (MQ=60)
AATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA < SRR4302533.4435723/94‑1 (MQ=60)
ATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG > SRR4302533.4254275/1‑94 (MQ=60)
ATGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAG > SRR4302533.5171989/1‑94 (MQ=60)
TGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGA < SRR4302533.5572817/94‑1 (MQ=60)
TGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGA > SRR4302533.2079959/1‑94 (MQ=60)
TGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGA > SRR4302533.691423/1‑94 (MQ=60)
TGTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGA > SRR4302533.5030587/1‑94 (MQ=60)
GTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC > SRR4302533.5698171/1‑94 (MQ=60)
GTTAA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC > SRR4302533.4495036/1‑94 (MQ=60)
ttaA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACA > SRR4302533.3778679/4‑94 (MQ=60)
ttaA‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACA < SRR4302533.324869/91‑1 (MQ=60)
A‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAG < SRR4302533.227983/94‑1 (MQ=60)
A‑AAACCAGGGCGCGGAGTTAATTCAACCTG‑TTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGA > SRR4302533.2785460/1‑94 (MQ=60)
AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGA > SRR4302533.3964706/1‑94 (MQ=60)
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GGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑A‑AAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGACAAAGA > NC_000913/2008387‑2008571
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
