Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,038,965 T→C V154A (GTC→GCC)  b1972 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,038,9650TC99.7% 1002.6 / ‑5.3 311V154A (GTC→GCC) b1972hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (151/159);  total (151/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01

Only 100 of 319 total aligned reads displayed.

GCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTG  >  NC_000913/2038875‑2039054
                                                                                          |                                                                                         
gCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCt                                                                                         <  2:7100650/93‑1 (MQ=255)
gCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCt                                                                                         <  1:1622731/93‑1 (MQ=255)
 cTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTa                                                                                        <  1:8095770/93‑1 (MQ=255)
   gggTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTAtt                                                                                      >  1:5356564/1‑92 (MQ=255)
   gggTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATc                                                                                      >  1:6185853/1‑93 (MQ=255)
   gggTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATc                                                                                      <  2:4442217/93‑1 (MQ=255)
    ggTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCt                                                                                     >  2:4381288/1‑93 (MQ=255)
       aaTTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGt                                                                                  >  1:8915611/1‑93 (MQ=255)
        aTTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTc                                                                                 <  1:1913839/93‑1 (MQ=255)
        aTTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTc                                                                                 <  2:5868862/93‑1 (MQ=255)
         ttttGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTcg                                                                                >  1:3890305/1‑93 (MQ=255)
          tttGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTcgc                                                                               <  1:3192116/93‑1 (MQ=255)
           ttgcttgcTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTcgcg                                                                              <  1:9219708/93‑1 (MQ=255)
           tcacttgcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTcgcg                                                                              <  1:3434334/90‑1 (MQ=255)
            tgcttgctTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGa                                                                             <  2:7833023/93‑1 (MQ=255)
            tgcttgctTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGa                                                                             <  2:2053607/93‑1 (MQ=255)
            tgcttgctTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGa                                                                             <  1:8001608/93‑1 (MQ=255)
             gcttgcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGAt                                                                            <  2:9564846/93‑1 (MQ=255)
              cttgcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGAtt                                                                           >  1:4532671/1‑93 (MQ=255)
              cttgcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGAtt                                                                           <  2:4989888/93‑1 (MQ=255)
                tacttTAGCGTTCACTTCACCCCAGGCGATGCAGCCAAAACTCTGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCt                                                                         <  1:1476870/91‑1 (MQ=38)
                 gcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTg                                                                        >  1:9047082/1‑93 (MQ=255)
                 gcttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTGCGCCTATCTTGTCGCGATTCTg                                                                        <  1:6827510/93‑1 (MQ=255)
                  cttTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTgg                                                                       <  1:6078561/93‑1 (MQ=255)
                   tttAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGc                                                                      >  2:7789335/1‑93 (MQ=255)
                   tttAGCGTTCACTTCAACCCAGGCGATGCAGAGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGc                                                                      >  2:4870841/1‑93 (MQ=255)
                    ttAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGcc                                                                     >  2:3897638/1‑93 (MQ=255)
                     tAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGccc                                                                    >  2:2755986/1‑93 (MQ=255)
                     tAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGccc                                                                    >  1:1184863/1‑93 (MQ=255)
                     tAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGccc                                                                    <  1:5230379/93‑1 (MQ=255)
                       gCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCa                                                                  <  2:337782/93‑1 (MQ=255)
                        cGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCaa                                                                 <  2:9153897/93‑1 (MQ=255)
                          ttCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATa                                                               >  2:7280810/1‑93 (MQ=255)
                          ttCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATa                                                               >  2:1830121/1‑93 (MQ=255)
                          ttCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATa                                                               >  2:3515931/1‑93 (MQ=255)
                          ttCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATa                                                               <  1:6255746/93‑1 (MQ=255)
                           tCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATAc                                                              >  1:8612185/1‑93 (MQ=255)
                             aCTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGGATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAt                                                            <  1:462463/93‑1 (MQ=255)
                              cTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAtt                                                           <  2:6009247/93‑1 (MQ=255)
                              cTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAtt                                                           <  2:9658724/93‑1 (MQ=255)
                               ttCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAGTa                                                          >  2:1673192/1‑93 (MQ=255)
                               cgcAACCTAGGCGATGCAGCCAAACCTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTa                                                          <  2:3178069/91‑1 (MQ=38)
                                tCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTAt                                                         >  2:6660764/1‑93 (MQ=255)
                                   aCCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCtg                                                      <  1:2594238/93‑1 (MQ=255)
                                   aCCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCtg                                                      >  2:5056338/1‑93 (MQ=255)
                                    cccAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCtgt                                                     >  1:4156230/1‑93 (MQ=255)
                                      cAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTgg                                                   <  2:4904866/93‑1 (MQ=255)
                                      cAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTgg                                                   >  1:7551513/1‑93 (MQ=255)
                                        ggCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTc                                                 <  1:2961738/93‑1 (MQ=255)
                                        ggCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTc                                                 <  2:5616336/93‑1 (MQ=255)
                                        ggCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGACTCTGGCCCCAATACATTATCTGTGGTc                                                 >  1:2916367/1‑93 (MQ=255)
                                         gCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTcc                                                <  1:9462612/93‑1 (MQ=255)
                                            aTGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTg                                             >  1:9956451/1‑93 (MQ=255)
                                            aTGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTg                                             >  2:8744193/1‑93 (MQ=255)
                                            aTGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTg                                             <  2:3586447/93‑1 (MQ=255)
                                              gCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTTTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCTTGaa                                           <  2:1943527/93‑1 (MQ=255)
                                              gCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGaa                                           <  1:2447621/93‑1 (MQ=255)
                                              gCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGaa                                           <  1:5284863/93‑1 (MQ=255)
                                              gCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGaa                                           >  1:4414997/1‑93 (MQ=255)
                                                 gCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGat                                        <  1:9148686/93‑1 (MQ=255)
                                                     aaaCTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGattatt                                    <  2:4767650/93‑1 (MQ=255)
                                                         tCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCAc                                <  1:5520464/93‑1 (MQ=255)
                                                         tCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCAc                                >  1:7213424/1‑93 (MQ=255)
                                                            gCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGc                             <  2:4148515/93‑1 (MQ=255)
                                                             cAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCa                            <  1:6709119/93‑1 (MQ=255)
                                                             cAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCa                            >  2:8697195/1‑93 (MQ=255)
                                                               aGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGc                          >  1:7903159/1‑93 (MQ=255)
                                                               aGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGc                          <  2:6504351/93‑1 (MQ=255)
                                                                gCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGcc                         >  1:3022784/1‑93 (MQ=255)
                                                                  ccgggCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGc                       <  1:418936/90‑1 (MQ=255)
                                                                  aCTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGc                       >  1:7018899/1‑93 (MQ=255)
                                                                    tGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTc                     <  2:5722250/93‑1 (MQ=255)
                                                                    tGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTc                     <  2:1540518/93‑1 (MQ=255)
                                                                     ggCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCa                    >  1:3555559/1‑93 (MQ=255)
                                                                      gCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAt                   <  2:8609111/93‑1 (MQ=255)
                                                                      gCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAt                   <  1:10043852/93‑1 (MQ=255)
                                                                      gCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAt                   <  1:133821/93‑1 (MQ=255)
                                                                      gCAACAGTTGCATAATTACGCCTATCTTGTCGCGATTCTGGCCACAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAt                   <  2:8977784/93‑1 (MQ=255)
                                                                       cAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATc                  >  2:1168077/1‑93 (MQ=255)
                                                                        aaCAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCt                 >  2:3944019/1‑93 (MQ=255)
                                                                        aaCAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCt                 >  1:8567374/1‑93 (MQ=255)
                                                                         aCAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTa                >  2:2158839/1‑93 (MQ=255)
                                                                            gTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgc             >  1:8518193/1‑93 (MQ=255)
                                                                            gTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgc             >  2:3014630/1‑93 (MQ=255)
                                                                             ttGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgct            <  2:8894955/93‑1 (MQ=255)
                                                                               ggaTAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgg          <  2:1405606/91‑1 (MQ=255)
                                                                               gCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgg          <  2:4264320/93‑1 (MQ=255)
                                                                               gCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgg          >  1:3777895/1‑93 (MQ=255)
                                                                               gCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgg          <  1:8798858/93‑1 (MQ=255)
                                                                               gCATAAGTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgg          <  1:4745790/93‑1 (MQ=255)
                                                                                cATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctggg         <  1:2275936/93‑1 (MQ=255)
                                                                                cATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctggg         <  2:9370961/93‑1 (MQ=255)
                                                                                  tAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgggct       <  2:7990072/93‑1 (MQ=255)
                                                                                  tAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgggct       >  1:1841763/1‑93 (MQ=255)
                                                                                   aaTTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgggctg      <  2:680264/93‑1 (MQ=255)
                                                                                    aTTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACgctgggctgg     >  1:9907745/1‑93 (MQ=255)
                                                                                     tttCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGggctggc    >  1:3642268/1‑93 (MQ=255)
                                                                                     tttCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGggctggc    >  2:9719202/1‑93 (MQ=255)
                                                                                      ttCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGggctggct   >  1:2762277/1‑93 (MQ=255)
                                                                                      ttCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGggctggct   <  1:3087895/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTG  >  NC_000913/2038875‑2039054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACT  >  NC_000913/2038872‑2039058
                                                                                             |                                                                                             
TCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGC                                                                                               >  SRR4302540.427488/1‑94 (MQ=60)
 CAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAACCTCGGCAAGCACTGGAAACAGTTGCATAATTTCGCC                                                                                              <  SRR4302540.6131709/94‑1 (MQ=60)
 CAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCC                                                                                              <  SRR4302540.2971368/94‑1 (MQ=60)
 CAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCC                                                                                              >  SRR4302540.839678/1‑94 (MQ=60)
 CAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCC                                                                                              >  SRR4302540.6811597/1‑94 (MQ=60)
 CAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATCTCGCC                                                                                              <  SRR4302540.6313922/94‑1 (MQ=60)
  AGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCT                                                                                             <  SRR4302540.6479362/94‑1 (MQ=60)
  AGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCT                                                                                             >  SRR4302540.3657025/1‑94 (MQ=60)
   GCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTA                                                                                            <  SRR4302540.1640513/94‑1 (MQ=60)
    CTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTAT                                                                                           <  SRR4302540.8189737/94‑1 (MQ=60)
    CTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTAT                                                                                           >  SRR4302540.3633545/1‑94 (MQ=60)
    CTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTAT                                                                                           <  SRR4302540.861185/94‑1 (MQ=60)
    CTGGGTAATTTTGCTTGCTTTACCGTTCACTTCAACCCAGGCGATGCAGCGAAACCTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTAT                                                                                           <  SRR4302540.861186/94‑1 (MQ=60)
     TGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATT                                                                                          >  SRR4302540.5415392/1‑94 (MQ=60)
     TGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATC                                                                                          >  SRR4302540.6254744/1‑94 (MQ=60)
     TGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATC                                                                                          >  SRR4302540.2920558/1‑94 (MQ=60)
     TGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCAGCAAGCACTGGCAACAGTTGGATAATTTCGCCTATC                                                                                          >  SRR4302540.105091/1‑94 (MQ=60)
        GTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTG                                                                                       >  SRR4302540.4370491/1‑94 (MQ=60)
         TAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAATCTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGT                                                                                      <  SRR4302540.8076409/94‑1 (MQ=60)
         TAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGT                                                                                      >  SRR4302540.9018863/1‑94 (MQ=60)
         TAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGT                                                                                      <  SRR4302540.6785774/94‑1 (MQ=60)
         TAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGT                                                                                      <  SRR4302540.5364926/94‑1 (MQ=60)
          AATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTC                                                                                     <  SRR4302540.2419156/94‑1 (MQ=60)
           atttgtctttctttagctgtcaccTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTGGCATAATTTCGCCTATCTTGTCG                                                                                    <  SRR4302540.6547251/70‑1 (MQ=60)
           ATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCG                                                                                    >  SRR4302540.3932546/1‑94 (MQ=60)
           ATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCG                                                                                    <  SRR4302540.1934735/94‑1 (MQ=60)
           ATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAAATTCGCCTATCTTGTCG                                                                                    >  SRR4302540.9099022/1‑94 (MQ=60)
            TTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGC                                                                                   >  SRR4302540.3903706/1‑94 (MQ=60)
            TTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGC                                                                                   >  SRR4302540.5277228/1‑94 (MQ=60)
             TTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCG                                                                                  >  SRR4302540.3218106/1‑94 (MQ=60)
             TTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCG                                                                                  <  SRR4302540.3226787/94‑1 (MQ=60)
             TTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCG                                                                                  <  SRR4302540.9764984/94‑1 (MQ=60)
              tcaCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGA                                                                                 <  SRR4302540.3471671/91‑1 (MQ=60)
              TTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGA                                                                                 <  SRR4302540.3471673/94‑1 (MQ=60)
              TTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGA                                                                                 >  SRR4302540.8997422/1‑94 (MQ=60)
              TTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGA                                                                                 <  SRR4302540.9330291/94‑1 (MQ=60)
               TGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGAT                                                                                <  SRR4302540.8094733/94‑1 (MQ=60)
                GCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATT                                                                               >  SRR4302540.4581728/1‑94 (MQ=60)
                  TTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCT                                                                             <  SRR4302540.3808881/94‑1 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGGGAAAAATCGGCAAGGACTGGCAACAGTTGCATAATTTCGACTATCTTGGCGCGA‑TCTGG                                                                           >  SRR4302540.9155691/1‑94 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            <  SRR4302540.4782021/94‑1 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            <  SRR4302540.5586310/94‑1 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            >  SRR4302540.9959046/1‑94 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            <  SRR4302540.143763/94‑1 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            >  SRR4302540.9155690/1‑94 (MQ=60)
                   TGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            >  SRR4302540.235854/1‑94 (MQ=60)
                   TACTTTAGCGTTCACTTCACCCCAGGCGATGCAGCCAAAACTCTGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTG                                                                            <  SRR4302540.1493040/94‑1 (MQ=60)
                    GCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGG                                                                           >  SRR4302540.3056721/1‑94 (MQ=60)
                    GCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTGCGCCTATCTTGTCGCGATTCTGG                                                                           <  SRR4302540.6903109/94‑1 (MQ=60)
                     CTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGC                                                                          <  SRR4302540.6146154/94‑1 (MQ=60)
                     CTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGC                                                                          <  SRR4302540.7113509/94‑1 (MQ=60)
                     CTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGC                                                                          >  SRR4302540.5356057/1‑94 (MQ=60)
                      TTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCC                                                                         <  SRR4302540.2854232/94‑1 (MQ=60)
                      TTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCC                                                                         <  SRR4302540.1583907/94‑1 (MQ=60)
                       TTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCC                                                                        <  SRR4302540.7048456/94‑1 (MQ=60)
                       TTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCC                                                                        >  SRR4302540.1197090/1‑94 (MQ=60)
                        TAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCC                                                                       <  SRR4302540.5287419/94‑1 (MQ=60)
                           CGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAAT                                                                    <  SRR4302540.4233271/94‑1 (MQ=60)
                           CGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAAT                                                                    >  SRR4302540.9529068/1‑94 (MQ=60)
                           CGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAAT                                                                    >  SRR4302540.8378751/1‑94 (MQ=60)
                            GTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATA                                                                   >  SRR4302540.3845001/1‑94 (MQ=60)
                             TTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATAC                                                                  >  SRR4302540.8712255/1‑94 (MQ=60)
                             TTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATAC                                                                  <  SRR4302540.6325354/94‑1 (MQ=60)
                               ccctgCAACCCAAGCGATGCCGCGAAAACTCGGCCAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAT                                                                <  SRR4302540.6210533/89‑1 (MQ=60)
                               CACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAT                                                                <  SRR4302540.6210534/94‑1 (MQ=60)
                               CACTTCAACCCAGGCGATGCAGCAAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACAT                                                                <  SRR4302540.9071151/94‑1 (MQ=60)
                                ACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGGATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATT                                                               <  SRR4302540.467394/94‑1 (MQ=60)
                                 CTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTA                                                              >  SRR4302540.7277743/1‑94 (MQ=60)
                                 CTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTA                                                              <  SRR4302540.6219327/94‑1 (MQ=60)
                                 CTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTA                                                              >  SRR4302540.10034705/1‑94 (MQ=60)
                                  TTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTAT                                                             <  SRR4302540.1265366/94‑1 (MQ=60)
                                  TTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTAT                                                             <  SRR4302540.1090111/94‑1 (MQ=60)
                                    CAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCT                                                           <  SRR4302540.2954318/94‑1 (MQ=60)
                                    CAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCT                                                           >  SRR4302540.4217815/1‑94 (MQ=60)
                                     AACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTG                                                          >  SRR4302540.4873067/1‑94 (MQ=60)
                                      ACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGT                                                         <  SRR4302540.2622216/94‑1 (MQ=60)
                                      ACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGT                                                         >  SRR4302540.4201258/1‑94 (MQ=60)
                                       CCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTG                                                        <  SRR4302540.2488780/94‑1 (MQ=60)
                                        CCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCACTACATTATCTGTGG                                                       >  SRR4302540.4857703/1‑94 (MQ=60)
                                        CCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGG                                                       >  SRR4302540.7636164/1‑94 (MQ=60)
                                        CCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGG                                                       >  SRR4302540.5308337/1‑94 (MQ=60)
                                          AGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTC                                                     >  SRR4302540.7165743/1‑94 (MQ=60)
                                          AGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGACTCTGGCCCCAATACATTATCTGTGGTC                                                     >  SRR4302540.2948278/1‑94 (MQ=60)
                                           GGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCC                                                    <  SRR4302540.7410336/94‑1 (MQ=60)
                                           GGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCC                                                    <  SRR4302540.2994393/94‑1 (MQ=60)
                                            GCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCG                                                   <  SRR4302540.9574881/94‑1 (MQ=60)
                                             CGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCATGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGG                                                  >  SRR4302540.3511417/1‑94 (MQ=60)
                                              GATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTG                                                 >  SRR4302540.10072662/1‑94 (MQ=60)
                                               ATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGA                                                <  SRR4302540.2829588/94‑1 (MQ=60)
                                                TGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAA                                               >  SRR4302540.4462844/1‑94 (MQ=60)
                                                 TCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAG                                              <  SRR4302540.8118948/94‑1 (MQ=60)
                                                 GCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAG                                              <  SRR4302540.2473975/94‑1 (MQ=60)
                                                 GCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAG                                              <  SRR4302540.4480770/94‑1 (MQ=60)
                                                 GCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAG                                              <  SRR4302540.5342613/94‑1 (MQ=60)
                                                   AGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGAT                                            <  SRR4302540.5684991/94‑1 (MQ=60)
                                                   AGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGAT                                            >  SRR4302540.4665638/1‑94 (MQ=60)
                                                   AGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTCTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGAT                                            <  SRR4302540.2516990/94‑1 (MQ=60)
                                                    GCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATT                                           <  SRR4302540.9258552/94‑1 (MQ=60)
                                                     CGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTA                                          <  SRR4302540.6914236/94‑1 (MQ=60)
                                                      GAAAACTCGGCAAGCACTGGCAACAGTTGCATAATATCGACTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTAT                                         <  SRR4302540.6501908/94‑1 (MQ=60)
                                                       AAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATT                                        >  SRR4302540.9327286/1‑94 (MQ=60)
                                                       AAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATT                                        <  SRR4302540.4723722/94‑1 (MQ=60)
                                                         AACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTC                                      >  SRR4302540.4417991/1‑94 (MQ=60)
                                                         AACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTC                                      <  SRR4302540.6516417/94‑1 (MQ=60)
                                                         AACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTC                                      >  SRR4302540.310475/1‑94 (MQ=60)
                                                          ACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCA                                     >  SRR4302540.5554598/1‑94 (MQ=60)
                                                           CTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCAC                                    >  SRR4302540.7293836/1‑94 (MQ=60)
                                                           CTCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCAC                                    >  SRR4302540.2999923/1‑94 (MQ=60)
                                                            TCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACC                                   <  SRR4302540.5320512/94‑1 (MQ=60)
                                                            TCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACC                                   <  SRR4302540.4496868/94‑1 (MQ=60)
                                                            TCGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACC                                   <  SRR4302540.5581262/94‑1 (MQ=60)
                                                             CGGCAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCG                                  <  SRR4302540.6273074/94‑1 (MQ=60)
                                                                CAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAG                               >  SRR4302540.8920340/1‑94 (MQ=60)
                                                                CAAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAG                               <  SRR4302540.6783155/94‑1 (MQ=60)
                                                                 AAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGC                              <  SRR4302540.1570500/94‑1 (MQ=60)
                                                                 AAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGC                              >  SRR4302540.7995329/1‑94 (MQ=60)
                                                                 AAGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGC                              >  SRR4302540.10043738/1‑94 (MQ=60)
                                                                  AGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCC                             <  SRR4302540.8687138/94‑1 (MQ=60)
                                                                  AGCACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCC                             >  SRR4302540.3056000/1‑94 (MQ=60)
                                                                    CACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGC                           >  SRR4302540.7096856/1‑94 (MQ=60)
                                                                     ccgGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCT                          <  SRR4302540.423337/91‑1 (MQ=60)
                                                                     ACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCT                          <  SRR4302540.423336/94‑1 (MQ=60)
                                                                     ACTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCT                          >  SRR4302540.1916078/1‑94 (MQ=60)
                                                                      CTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTC                         >  SRR4302540.884627/1‑94 (MQ=60)
                                                                      CTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTC                         >  SRR4302540.6791272/1‑94 (MQ=60)
                                                                      CTGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTC                         <  SRR4302540.3362147/94‑1 (MQ=60)
                                                                       TGGCAACAGTTGCATAATTTCTCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCA                        <  SRR4302540.8698713/94‑1 (MQ=60)
                                                                       TGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCA                        >  SRR4302540.8524467/1‑94 (MQ=60)
                                                                       TGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCA                        >  SRR4302540.2222208/1‑94 (MQ=60)
                                                                       TGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCA                        >  SRR4302540.5196361/1‑94 (MQ=60)
                                                                       TGGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCA                        >  SRR4302540.3594408/1‑94 (MQ=60)
                                                                        GGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAT                       <  SRR4302540.3323916/94‑1 (MQ=60)
                                                                        GGCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCAT                       <  SRR4302540.2952091/94‑1 (MQ=60)
                                                                         GCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATC                      <  SRR4302540.10160621/94‑1 (MQ=60)
                                                                         GCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATC                      <  SRR4302540.135223/94‑1 (MQ=60)
                                                                         GCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATC                      >  SRR4302540.7953815/1‑94 (MQ=60)
                                                                         GCAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATC                      <  SRR4302540.8155489/94‑1 (MQ=60)
                                                                          CAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCT                     >  SRR4302540.7795216/1‑94 (MQ=60)
                                                                          CAACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCT                     >  SRR4302540.8666869/1‑94 (MQ=60)
                                                                           AACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTA                    >  SRR4302540.3461748/1‑94 (MQ=60)
                                                                           AACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTA                    >  SRR4302540.6482936/1‑94 (MQ=60)
                                                                            ACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTAC                   >  SRR4302540.3812139/1‑94 (MQ=60)
                                                                            ACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTAC                   <  SRR4302540.9270314/94‑1 (MQ=60)
                                                                            ACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTAC                   <  SRR4302540.1200368/94‑1 (MQ=60)
                                                                            ACAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTAC                   >  SRR4302540.6279362/1‑94 (MQ=60)
                                                                             CAGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACG                  <  SRR4302540.2744776/94‑1 (MQ=60)
                                                                              AGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGC                 <  SRR4302540.5451544/94‑1 (MQ=60)
                                                                              AGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGC                 <  SRR4302540.1903500/94‑1 (MQ=60)
                                                                              AGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGC                 >  SRR4302540.8617186/1‑94 (MQ=60)
                                                                              AGTTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGC                 >  SRR4302540.8617185/1‑94 (MQ=60)
                                                                                TTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTG               <  SRR4302540.7447630/94‑1 (MQ=60)
                                                                                TTGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTG               >  SRR4302540.1363691/1‑94 (MQ=60)
                                                                                 TGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGG              >  SRR4302540.3819110/1‑94 (MQ=60)
                                                                                 TGCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGG              >  SRR4302540.1897121/1‑94 (MQ=60)
                                                                                  GCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGG             <  SRR4302540.8900592/94‑1 (MQ=60)
                                                                                  GCATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGG             <  SRR4302540.2221460/94‑1 (MQ=60)
                                                                                  GCATAAGTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGG             <  SRR4302540.4796436/94‑1 (MQ=60)
                                                                                   CATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGC            >  SRR4302540.1667145/1‑94 (MQ=60)
                                                                                   CATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGC            >  SRR4302540.1667144/1‑94 (MQ=60)
                                                                                   CATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGC            <  SRR4302540.10086141/94‑1 (MQ=60)
                                                                                   CATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGC            <  SRR4302540.2300374/94‑1 (MQ=60)
                                                                                    ATAATTTCGCCTATCTTGTCGCGATTCTGTCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCT           <  SRR4302540.4017987/94‑1 (MQ=60)
                                                                                    ATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCT           >  SRR4302540.1861937/1‑94 (MQ=60)
                                                                                    ATAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCT           >  SRR4302540.4625126/1‑94 (MQ=60)
                                                                                     TAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTG          <  SRR4302540.8808374/94‑1 (MQ=60)
                                                                                     TAATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTG          <  SRR4302540.6238140/94‑1 (MQ=60)
                                                                                      AATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGG         >  SRR4302540.10023479/1‑94 (MQ=60)
                                                                                       ATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGC        >  SRR4302540.3223162/1‑94 (MQ=60)
                                                                                       ATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGC        >  SRR4302540.9497549/1‑94 (MQ=60)
                                                                                       ATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGC        >  SRR4302540.3016074/1‑94 (MQ=60)
                                                                                       ATTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGC        >  SRR4302540.3682159/1‑94 (MQ=60)
                                                                                        TTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCT       <  SRR4302540.8006760/94‑1 (MQ=60)
                                                                                        TTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCT       >  SRR4302540.2792121/1‑94 (MQ=60)
                                                                                        TTTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCT       >  SRR4302540.2792122/1‑94 (MQ=60)
                                                                                         TTCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTG      <  SRR4302540.3121778/94‑1 (MQ=60)
                                                                                          TCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGT     <  SRR4302540.9185592/94‑1 (MQ=60)
                                                                                          TCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGT     >  SRR4302540.3800979/1‑94 (MQ=60)
                                                                                          TCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGT     <  SRR4302540.3982783/94‑1 (MQ=60)
                                                                                          TCGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGT     <  SRR4302540.9185591/94‑1 (MQ=60)
                                                                                           CGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTA    >  SRR4302540.4258442/1‑94 (MQ=60)
                                                                                           CGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTA    >  SRR4302540.4703667/1‑94 (MQ=60)
                                                                                           CGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTA    >  SRR4302540.4703668/1‑94 (MQ=60)
                                                                                           CGCCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTA    <  SRR4302540.5708658/94‑1 (MQ=60)
                                                                                             CCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACT  >  SRR4302540.5710981/1‑94 (MQ=60)
                                                                                             CCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACT  <  SRR4302540.1525930/94‑1 (MQ=60)
                                                                                             CCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACT  >  SRR4302540.1956176/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACT  >  NC_000913/2038872‑2039058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑