Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,072,030 |
T→A |
C824S (TGC→AGC) |
b2000 → |
outer membrane fluffing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,072,030 | 0 | T | A | 100.0%
| 569.6
/ NA
| 159 | C824S (TGC→AGC) | b2000 | outer membrane fluffing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (84/75); total (84/75) |
Only 100 of 180 total aligned reads displayed.
GCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCG > NC_000913/2071940‑2072119
|
cgGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGcc > 1:8040551/1‑93 (MQ=255)
gggggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCGCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCt < 2:8796832/93‑1 (MQ=255)
ggggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTg < 1:9163547/93‑1 (MQ=255)
ggggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTg > 2:432389/1‑93 (MQ=255)
ggggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTg < 1:2774675/93‑1 (MQ=255)
gggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGACGATGACGGCAGccacg > 2:2192610/1‑90 (MQ=255)
ggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTggg > 2:6539087/1‑93 (MQ=255)
gTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGc < 1:8423289/93‑1 (MQ=255)
tataTGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCCGGATGATGCGGGCACCCTGGGCg > 1:6576179/1‑93 (MQ=255)
atatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTgggggg > 2:100955/1‑93 (MQ=255)
tatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGa > 1:6139442/1‑93 (MQ=255)
tatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGa > 2:3646769/1‑93 (MQ=255)
atGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGAt < 2:9667209/93‑1 (MQ=255)
tGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATa > 2:9063856/1‑93 (MQ=255)
tGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATa < 2:2691545/93‑1 (MQ=255)
tGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATa < 1:4813072/93‑1 (MQ=255)
cggTGCTGCTGGCCATTTTTCCGTTGATGTTAAGGATGATGACGGCTCCCCTGCCGGCACGGTCCGGGATGAGGCCGGCAGCCTGGGCGGAtc > 2:4188368/2‑92 (MQ=255)
ggTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAc < 2:4082964/93‑1 (MQ=255)
tgctgcTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCt > 1:230107/1‑93 (MQ=255)
tgctgcTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCt < 2:4345515/93‑1 (MQ=255)
tgctgcTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCt > 1:4258942/1‑93 (MQ=255)
tgctgcTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCt > 1:7779492/1‑93 (MQ=255)
gctgctGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTg > 1:5554885/1‑93 (MQ=255)
ctgctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGa > 2:315936/1‑93 (MQ=255)
ctgctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGa < 1:6229888/93‑1 (MQ=255)
tgctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGaa > 2:2314492/1‑93 (MQ=255)
gctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAAt < 1:9546293/93‑1 (MQ=255)
ctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATc < 1:3689812/93‑1 (MQ=255)
ctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATc > 2:288831/1‑93 (MQ=255)
ctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATc < 1:3358/93‑1 (MQ=255)
ctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATc > 1:1136656/1‑93 (MQ=255)
tgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGGAGCCTGGGCGGATACCTGAATCt < 2:2490334/93‑1 (MQ=255)
ggCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTg > 2:9896990/1‑93 (MQ=255)
ggCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTg > 2:3230424/1‑93 (MQ=255)
ccATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGt > 1:4307157/1‑93 (MQ=255)
cATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTa > 2:2051586/1‑93 (MQ=255)
cATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTa > 1:1908984/1‑93 (MQ=255)
aTTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTac > 1:3400771/1‑93 (MQ=255)
aTTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTac < 2:1729520/93‑1 (MQ=255)
ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacc > 1:1851217/1‑92 (MQ=255)
ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTaca > 1:900606/1‑93 (MQ=255)
ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGAATGATGCCCGCAGCCTGGGCGGGTACCTGAATCTGGTaca > 2:159248/1‑93 (MQ=255)
ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCCTGCCGGCACTGTCCGGGATGATGCCGGCAGCCTTGGCGGATACCTGAATCTGGTaca > 1:9158362/1‑93 (MQ=255)
tcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacac < 2:8871348/93‑1 (MQ=255)
ttcCGTTGATGTTAAGGATGATGCCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacacac < 2:5518749/93‑1 (MQ=255)
ttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacacac > 2:298864/1‑93 (MQ=255)
ccGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATGCCTGAATCTGGTACACACGt < 2:8381791/93‑1 (MQ=255)
cGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtc > 1:9962123/1‑93 (MQ=255)
cGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtc > 2:4052012/1‑93 (MQ=255)
cGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtc < 2:8563143/93‑1 (MQ=255)
cGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtc < 2:4652800/93‑1 (MQ=255)
gTTGATGTTAAGGATGATGACGGTTGCCGTGCCGGCACGGTCAGGGATGATGCCGGCAGCCTGGGCGGCTACCTGAATCTGGTACACACGtcc < 2:6871287/93‑1 (MQ=255)
ttGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcct > 1:3864037/1‑93 (MQ=255)
tGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCTGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcctc > 1:8709461/1‑93 (MQ=255)
tGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcctc > 2:6409426/1‑93 (MQ=255)
gATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcctcc < 2:8301920/93‑1 (MQ=255)
tGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCgg > 2:8039256/1‑93 (MQ=255)
tGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCgg < 1:1743298/93‑1 (MQ=255)
gTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGc > 1:2980334/1‑93 (MQ=255)
ttAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGcc < 1:2841037/93‑1 (MQ=255)
ttAAGGATGATGACGGCTCCCGTGCCGGCACGGGCCGGTATGATGCCGGCAGCCTGGGCGGATCCCTGAATCTGGTACACACGTCCTCCGGcc < 1:9696198/93‑1 (MQ=255)
aGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCtgg > 1:6289196/1‑92 (MQ=255)
ggATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCtgtg < 2:5984522/93‑1 (MQ=255)
ggATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCtgtg < 2:1440465/93‑1 (MQ=255)
atgatgACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTggg < 2:2170827/93‑1 (MQ=255)
atgatgACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTggg < 2:2022090/93‑1 (MQ=255)
atgatgACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCCGTggg > 1:7274453/1‑93 (MQ=255)
tgatgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGc > 2:56118/1‑93 (MQ=255)
tgatgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGc < 1:1595904/93‑1 (MQ=255)
tgatgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGc < 2:8075795/93‑1 (MQ=255)
gaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGAc < 2:7376054/93‑1 (MQ=255)
cGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACAt < 1:9653805/93‑1 (MQ=255)
cGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACAt < 1:8838705/93‑1 (MQ=255)
ggCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACAtt < 2:4934208/93‑1 (MQ=255)
cTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATtgt < 2:8123196/93‑1 (MQ=255)
cTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATtgt < 1:10016940/93‑1 (MQ=255)
cGTGCCGGCACGGTCCGGGATGATGCCGGCAGCTTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGca < 2:6044746/93‑1 (MQ=255)
atGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATGCCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcac < 1:2651556/92‑1 (MQ=255)
tGCCGGCACGGTCCGGGGTGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACATCCTCCGGCCTGTGGGCCGCCATTGTGGcacg > 2:6825551/1‑92 (MQ=255)
tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca < 1:584301/93‑1 (MQ=255)
tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca < 1:6568530/93‑1 (MQ=255)
gCCGGCACGGTCGGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAg < 2:9344719/93‑1 (MQ=255)
ccGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAgg > 2:8820993/1‑93 (MQ=255)
ggCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGa < 2:7411098/93‑1 (MQ=255)
gCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGaa > 1:2111551/1‑93 (MQ=255)
cACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAc < 1:4079976/93‑1 (MQ=255)
cACGGCCCGGGACGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAc > 1:7367757/1‑93 (MQ=255)
aCGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAcc < 1:5334267/93‑1 (MQ=255)
tCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGcc > 2:8368910/1‑93 (MQ=255)
cGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCcac > 1:5177252/1‑93 (MQ=255)
cGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCcac > 1:8871676/1‑93 (MQ=255)
gggATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCcaca > 2:9522287/1‑93 (MQ=255)
gggATGATGCCGGCAGCCTGGGCGGATACCTGAATATGGTACACACGTCCTCCGGCCTGTGGGCTGACTGTGTGGCACAGGGAACCCGCcaca > 1:3497035/1‑93 (MQ=255)
atggtgCGGGCAGCCTGGGCGGATCCCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCa < 2:6423786/93‑1 (MQ=255)
gatgCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATg < 2:4083386/93‑1 (MQ=255)
tgCCGGCAGCGTGGGGGGATACCGGAATCTGGTCCACACGCCTCCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGaa < 2:2656498/93‑1 (MQ=255)
gCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGaaa < 1:1414106/93‑1 (MQ=255)
ccGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAg < 1:7594511/93‑1 (MQ=255)
cGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGc < 2:9794443/93‑1 (MQ=255)
ggCAGCCGGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCg < 1:3232893/93‑1 (MQ=255)
|
GCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCG > NC_000913/2071940‑2072119
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCAT > NC_000913/2071937‑2072123
|
GCCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCA < SRR4302540.2680421/94‑1 (MQ=60)
CGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGC > SRR4302540.6240794/1‑94 (MQ=60)
GCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCC > SRR4302540.8133982/1‑94 (MQ=60)
GGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGG < SRR4302540.2804658/94‑1 (MQ=60)
GGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGG < SRR4302540.9273510/94‑1 (MQ=60)
GTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCG > SRR4302540.1605660/1‑94 (MQ=60)
GTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCG < SRR4302540.8521058/94‑1 (MQ=60)
GTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCCGGATGATGCGGGCACCCTGGGCG > SRR4302540.6649023/1‑94 (MQ=60)
ATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGA > SRR4302540.6207817/1‑94 (MQ=60)
ATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGA > SRR4302540.6446604/1‑94 (MQ=60)
TATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGAT < SRR4302540.74706/94‑1 (MQ=60)
TGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAC < SRR4302540.4864585/94‑1 (MQ=60)
GGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACC > SRR4302540.3097151/1‑94 (MQ=60)
GGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACC > SRR4302540.6087018/1‑94 (MQ=60)
GTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCT > SRR4302540.7870430/1‑94 (MQ=60)
GTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCT > SRR4302540.4305271/1‑94 (MQ=60)
GTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCT > SRR4302540.232332/1‑94 (MQ=60)
TGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTG > SRR4302540.5616066/1‑94 (MQ=60)
TGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTG > SRR4302540.3606750/1‑94 (MQ=60)
CTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAA < SRR4302540.6299173/94‑1 (MQ=60)
GCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATC < SRR4302540.9659236/94‑1 (MQ=60)
GCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATC > SRR4302540.1148516/1‑94 (MQ=60)
CTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCT < SRR4302540.3730115/94‑1 (MQ=60)
CTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCT < SRR4302540.3394/94‑1 (MQ=60)
GGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGGATCTGG > SRR4302540.4178553/1‑94 (MQ=60)
GGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGG < SRR4302540.2941166/94‑1 (MQ=60)
GGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGG > SRR4302540.8643238/1‑94 (MQ=60)
GCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGT > SRR4302540.4354034/1‑94 (MQ=60)
CCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTA > SRR4302540.1929840/1‑94 (MQ=60)
CATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTAC > SRR4302540.3437847/1‑94 (MQ=60)
ATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACC > SRR4302540.1871518/1‑94 (MQ=60)
ATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACA > SRR4302540.910174/1‑94 (MQ=60)
ATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCCTGCCGGCACTGTCCGGGATGATGCCGGCAGCCTTGGCGGATACCTGAATCTGGTACA > SRR4302540.9268294/1‑94 (MQ=60)
TTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACAC > SRR4302540.9715595/1‑94 (MQ=60)
TTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACAC > SRR4302540.9922766/1‑94 (MQ=60)
TTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACAC < SRR4302540.4984172/94‑1 (MQ=60)
TCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACA < SRR4302540.3273419/94‑1 (MQ=60)
CTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACAC > SRR4302540.8443704/1‑94 (MQ=60)
TCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGT < SRR4302540.2208802/94‑1 (MQ=60)
TCCGTTGATGTTAAGGATGATGACGGCTCCCCTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGACACCTGAATCTGGTACACACGT > SRR4302540.7018983/1‑94 (MQ=60)
CCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTC > SRR4302540.10078362/1‑94 (MQ=60)
GTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCT > SRR4302540.3906040/1‑94 (MQ=60)
GTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCT < SRR4302540.2795200/94‑1 (MQ=60)
TTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCTGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTC > SRR4302540.8810556/1‑94 (MQ=60)
GATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCG < SRR4302540.3812777/94‑1 (MQ=60)
TGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGC < SRR4302540.1762163/94‑1 (MQ=60)
TGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGC > SRR4302540.3013247/1‑94 (MQ=60)
TGTTAAGGATGATGACGGCTCCCGTGACGGCAAGGTTCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACAGACGTTCTCCGGC > SRR4302540.1457803/1‑94 (MQ=60)
GTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGCACACACGTCCTCCGGCC > SRR4302540.5430101/1‑94 (MQ=60)
TTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCT < SRR4302540.2871781/94‑1 (MQ=60)
TTAAGGATGATGACGGCTCCCGTGCCGGCACGGGCCGGTATGATGCCGGCAGCCTGGGCGGATCCCTGAATCTGGTACACACGTCCTCCGGCCT < SRR4302540.9810211/94‑1 (MQ=60)
aaggagcacGACGGCTCCCGCGCCGGCACAGTCCGGGATGATGCCGGCAGCCTGGGCGAATCCCTGAATCTGGTACACACGTCCTCCGGCCTGT < SRR4302540.1759392/85‑1 (MQ=60)
AAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGT < SRR4302540.1759391/94‑1 (MQ=60)
AAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGG > SRR4302540.6359199/1‑94 (MQ=60)
GATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGG > SRR4302540.8943198/1‑94 (MQ=60)
GATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCCGTGGG > SRR4302540.7355625/1‑94 (MQ=60)
TGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCT < SRR4302540.1613342/94‑1 (MQ=60)
GATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTG > SRR4302540.1843872/1‑94 (MQ=60)
ATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGA < SRR4302540.7165141/94‑1 (MQ=60)
ATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGA > SRR4302540.4111866/1‑94 (MQ=60)
CGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATT < SRR4302540.9767465/94‑1 (MQ=60)
CGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATT < SRR4302540.8940935/94‑1 (MQ=60)
GCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGT < SRR4302540.1160179/94‑1 (MQ=60)
CTCCCGTGCCGGCACTGTCCGGGAAGCTGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGACCTCCAGCCTGCGGGCTGACATTGTG > SRR4302540.9192472/1‑94 (MQ=60)
CTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTG < SRR4302540.10133537/94‑1 (MQ=60)
CCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGC < SRR4302540.9339812/94‑1 (MQ=60)
CCGTGCCAGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCA > SRR4302540.6334313/1‑94 (MQ=60)
CGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCAC > SRR4302540.8112159/1‑94 (MQ=60)
ATGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATGCCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACA < SRR4302540.2680326/94‑1 (MQ=60)
TGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAG < SRR4302540.6641315/94‑1 (MQ=60)
TGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAG < SRR4302540.590613/94‑1 (MQ=60)
GCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGG < SRR4302540.1952402/94‑1 (MQ=60)
GGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAA > SRR4302540.2134209/1‑94 (MQ=60)
GCACGGCCCGGGACGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAC > SRR4302540.7449895/1‑94 (MQ=60)
CACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACC < SRR4302540.4123967/94‑1 (MQ=60)
ACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCC < SRR4302540.5392728/94‑1 (MQ=60)
GGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGC > SRR4302540.2332982/1‑94 (MQ=60)
GTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCC > SRR4302540.7392816/1‑94 (MQ=60)
GTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCC > SRR4302540.8935244/1‑94 (MQ=60)
CCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCAC > SRR4302540.5233601/1‑94 (MQ=60)
CCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCAC > SRR4302540.8974344/1‑94 (MQ=60)
CGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATATGGTACACACGTCCTCCGGCCTGTGGGCTGACTGTGTGGCACAGGGAACCCGCCACA > SRR4302540.3535120/1‑94 (MQ=60)
GGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAG > SRR4302540.5297685/1‑94 (MQ=60)
ATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAT > SRR4302540.3425138/1‑94 (MQ=60)
ATGATGCCGGCAGCCGGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAT < SRR4302540.925890/94‑1 (MQ=60)
GATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGA > SRR4302540.4637067/1‑94 (MQ=60)
GCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAG < SRR4302540.1429364/94‑1 (MQ=60)
CCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGC < SRR4302540.9147786/94‑1 (MQ=60)
CCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGC < SRR4302540.7679833/94‑1 (MQ=60)
GGCAGCCGGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGT < SRR4302540.3268049/94‑1 (MQ=60)
CAGCCTGGGCGGATACCTGAGTCTGGTACACCCGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCA < SRR4302540.5055027/94‑1 (MQ=60)
CAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGGGTCA > SRR4302540.4732333/1‑94 (MQ=60)
AGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCAT > SRR4302540.2414942/1‑94 (MQ=60)
AGCCTGGGCGGATACCTGAATCTGGTACACACGACCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGATAGCGTCAT > SRR4302540.468243/1‑94 (MQ=60)
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ACCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCAT > NC_000913/2071937‑2072123
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
