Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,089,888 |
T→C |
L257P (CTC→CCC) |
hisD → |
L‑histidinal:NAD+ oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,089,888 | 0 | T | C | 99.0%
| 610.7
/ ‑3.5
| 191 | L257P (CTC→CCC) | hisD | L‑histidinal:NAD+ oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (90/99); total (92/99) |
| Fisher's exact test for biased strand distribution p-value = 2.31e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
Only 100 of 205 total aligned reads displayed.
GTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC > NC_000913/2089798‑2089977
|
gTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccct > 1:5755937/1‑93 (MQ=255)
tGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccctc < 1:8223363/93‑1 (MQ=255)
tGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccctc > 2:9358331/1‑93 (MQ=255)
gcggcgATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccctct < 2:917382/93‑1 (MQ=255)
gcggcgATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccctct < 2:137899/93‑1 (MQ=255)
cggcgATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCcctctc < 1:1742953/93‑1 (MQ=255)
cggcgAGCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCCGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCcctctc < 1:1742956/93‑1 (MQ=255)
atcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCt > 2:3335968/1‑93 (MQ=255)
atcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCt > 1:5535282/1‑93 (MQ=255)
atcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCt < 2:2856439/93‑1 (MQ=255)
tcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTg > 2:5935147/1‑93 (MQ=255)
tcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTg > 1:6920292/1‑93 (MQ=255)
cgatATGCCCGCAGGCCCGTCGGAAGTGCTGGGGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGa > 1:1096419/1‑93 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac < 1:9114932/93‑1 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac > 1:2931720/1‑93 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac < 2:7522919/93‑1 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac > 1:7134679/1‑93 (MQ=255)
tatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAaca < 1:3913269/93‑1 (MQ=255)
atGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAacac < 2:4366983/93‑1 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg > 1:1196611/1‑93 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg < 2:637154/93‑1 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg < 2:9075791/93‑1 (MQ=255)
gCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACgg < 2:4198393/93‑1 (MQ=255)
ccGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑cc < 2:2676742/93‑1 (MQ=255)
cGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑ccc < 1:2061833/93‑1 (MQ=255)
gCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGG‑CCCg > 1:156727/1‑93 (MQ=255)
aGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGa > 2:4614562/1‑93 (MQ=255)
aGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGa > 2:2659572/1‑93 (MQ=255)
ggCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGAc < 1:9540138/93‑1 (MQ=255)
ggCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGAc > 1:2619568/1‑93 (MQ=255)
gCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACt < 2:4904063/93‑1 (MQ=255)
cccGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTc < 1:6234385/93‑1 (MQ=255)
ccGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTca < 1:5183884/93‑1 (MQ=255)
cGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTcac < 2:3977164/93‑1 (MQ=255)
cGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTcac > 2:9802362/1‑93 (MQ=255)
tCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAg > 1:6540878/1‑93 (MQ=255)
tCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAg < 2:1697914/93‑1 (MQ=255)
tCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAg > 1:7450806/1‑93 (MQ=255)
ggAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAggg > 2:8011089/1‑92 (MQ=255)
gAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CGCGGACTCACAGGTg > 1:3523745/1‑93 (MQ=255)
gAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTg > 2:9926093/1‑93 (MQ=255)
gAAGTGCTGGAGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTg > 2:6186269/1‑93 (MQ=255)
aaGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGa < 1:4537197/93‑1 (MQ=255)
aaGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGa > 1:1515472/1‑93 (MQ=255)
aGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAt > 2:3069710/1‑93 (MQ=255)
gTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAtt < 1:328176/93‑1 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAttt < 2:546301/93‑1 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAttt > 2:4742197/1‑93 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAttt > 1:9641167/1‑93 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAttt < 1:4885710/93‑1 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGAttt > 2:157932/1‑93 (MQ=255)
gCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACAAGG‑CCCGGACTCACAGGAGAtttt > 2:5835847/1‑93 (MQ=255)
tGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTAc > 1:8417427/1‑93 (MQ=255)
ggTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACt < 1:5935148/93‑1 (MQ=255)
ggTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACt < 2:4442741/93‑1 (MQ=255)
ggTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACt > 2:9136981/1‑93 (MQ=255)
gTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTg < 1:4365626/93‑1 (MQ=255)
tGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGa < 2:1811040/93‑1 (MQ=255)
tGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGa < 1:9920000/93‑1 (MQ=255)
tGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGa < 1:7904456/93‑1 (MQ=255)
aTTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACg < 2:1739082/93‑1 (MQ=255)
gCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGccc > 2:5032657/1‑93 (MQ=255)
gCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGccc > 2:9448389/1‑93 (MQ=255)
tGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCgc > 1:2874062/1‑93 (MQ=255)
gACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCgct < 2:5110296/93‑1 (MQ=255)
gcggcgCTGCGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGctgctg < 1:4225679/93‑1 (MQ=255)
gcggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGctgctg > 1:2568088/1‑93 (MQ=255)
cggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGa < 1:4502636/93‑1 (MQ=255)
ggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGat < 2:1063385/93‑1 (MQ=255)
gcgcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGata < 1:8360680/93‑1 (MQ=255)
gcgcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGata > 2:8266660/1‑93 (MQ=255)
cTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATgg < 2:1309023/93‑1 (MQ=255)
aCGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGgcg > 2:700578/1‑93 (MQ=255)
ccGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgt > 2:317978/1‑93 (MQ=255)
ccGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgt > 1:8881270/1‑93 (MQ=255)
ccGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgt > 2:2042035/1‑93 (MQ=255)
cGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtc > 2:7409793/1‑93 (MQ=255)
cGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtc > 1:1351753/1‑93 (MQ=255)
ggATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcg < 1:3841572/93‑1 (MQ=255)
gATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgc > 2:1845008/1‑93 (MQ=255)
aTTGCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcg < 1:2129837/93‑1 (MQ=255)
tttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCCGGACTCACAGGGGTTTTTACTGAGGCCCGCTGCTGTTATGGcgcgtccct > 2:8496408/1‑90 (MQ=255)
tttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcgt > 1:6824289/1‑93 (MQ=255)
ttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGtt < 1:3157475/93‑1 (MQ=255)
ttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGtt < 1:1415717/93‑1 (MQ=255)
tCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTg > 2:7251086/1‑93 (MQ=255)
tCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTg < 2:6482729/93‑1 (MQ=255)
cGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGc < 1:5411948/93‑1 (MQ=255)
cGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGc < 1:5201539/93‑1 (MQ=255)
gTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGcc < 2:6923615/93‑1 (MQ=255)
tGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCg < 2:2143472/93‑1 (MQ=255)
tGGCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACACCCGCTGCTGATATGGCGCGTCGCGTTGCCg > 2:2308163/1‑93 (MQ=255)
ggCTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGa < 2:7609825/93‑1 (MQ=255)
cTTCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAgg < 2:1570921/93‑1 (MQ=255)
ttCTGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGc > 1:9303644/1‑93 (MQ=255)
tGATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGt < 1:7013808/93‑1 (MQ=255)
gATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTc > 2:5205943/1‑93 (MQ=255)
gATTTGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTc > 2:9593598/1‑93 (MQ=255)
tttGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGa < 1:8771805/93‑1 (MQ=255)
tGCCCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGCTATGGCGCGTCGCGTTGCCGAGGCCGCCGGAc > 1:1587201/1‑93 (MQ=255)
|
GTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGG‑CCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC > NC_000913/2089798‑2089977
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > NC_000913/2089797‑2089981
|
GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCT > SRR4302540.5819471/1‑94 (MQ=60)
TGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCT < SRR4302540.8318963/94‑1 (MQ=60)
TGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCT < SRR4302540.8318964/94‑1 (MQ=60)
CGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCA < SRR4302540.1761815/94‑1 (MQ=60)
CGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCA < SRR4302540.1761814/94‑1 (MQ=60)
CGGCGAGCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCCGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCA < SRR4302540.1761817/94‑1 (MQ=60)
GCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGG > SRR4302540.10031254/1‑94 (MQ=60)
CGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGC > SRR4302540.1327370/1‑94 (MQ=60)
GATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCT > SRR4302540.5596244/1‑94 (MQ=60)
ATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTG > SRR4302540.3171279/1‑94 (MQ=60)
ATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTG > SRR4302540.6997303/1‑94 (MQ=60)
TCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGGGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGA > SRR4302540.1107700/1‑94 (MQ=60)
GATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAAC > SRR4302540.2963881/1‑94 (MQ=60)
GATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAAC > SRR4302540.2963880/1‑94 (MQ=60)
GATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAAC > SRR4302540.7214166/1‑94 (MQ=60)
ATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACA < SRR4302540.9224489/94‑1 (MQ=60)
ATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACA > SRR4302540.3917250/1‑94 (MQ=60)
TATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACAC < SRR4302540.3955664/94‑1 (MQ=60)
TATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACAC < SRR4302540.1418266/94‑1 (MQ=60)
ATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACG > SRR4302540.1208924/1‑94 (MQ=60)
ATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACG > SRR4302540.621169/1‑94 (MQ=60)
CCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCC < SRR4302540.1194663/94‑1 (MQ=60)
CGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGGCAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGGCCTCTCAGGCTGCACACGGCCCG > SRR4302540.1256449/1‑94 (MQ=60)
CGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCG > SRR4302540.158319/1‑94 (MQ=60)
CGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCG > SRR4302540.158318/1‑94 (MQ=60)
CGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCG < SRR4302540.2084022/94‑1 (MQ=60)
GCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGG < SRR4302540.5252160/94‑1 (MQ=60)
AGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGAC > SRR4302540.2647880/1‑94 (MQ=60)
GGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACT < SRR4302540.9653033/94‑1 (MQ=60)
CCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCA < SRR4302540.6303723/94‑1 (MQ=60)
CCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCA < SRR4302540.7043779/94‑1 (MQ=60)
CCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCAC < SRR4302540.4389730/94‑1 (MQ=60)
CCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCAC < SRR4302540.5240317/94‑1 (MQ=60)
CGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACA > SRR4302540.9661826/1‑94 (MQ=60)
CGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACA < SRR4302540.2071639/94‑1 (MQ=60)
GTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAG > SRR4302540.7533853/1‑94 (MQ=60)
GTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAG > SRR4302540.6714334/1‑94 (MQ=60)
GTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAG > SRR4302540.6613460/1‑94 (MQ=60)
CGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGG > SRR4302540.8643696/1‑94 (MQ=60)
CGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCCGATTTGCCCTCTCAGGCAGAACACGGCCCGGACTCACAGGG > SRR4302540.9083092/1‑94 (MQ=60)
GGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCGCGGACTCACAGGTG > SRR4302540.3562163/1‑94 (MQ=60)
GAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGA > SRR4302540.1532233/1‑94 (MQ=60)
GAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGA < SRR4302540.5857382/94‑1 (MQ=60)
AAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAT < SRR4302540.4586305/94‑1 (MQ=60)
AAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAT < SRR4302540.4227837/94‑1 (MQ=60)
AGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATT > SRR4302540.7300467/1‑94 (MQ=60)
GTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTT < SRR4302540.331465/94‑1 (MQ=60)
GTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTT > SRR4302540.9754737/1‑94 (MQ=60)
TGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTT < SRR4302540.4938196/94‑1 (MQ=60)
GCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTA > SRR4302540.2093161/1‑94 (MQ=60)
CTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTAC < SRR4302540.8981448/94‑1 (MQ=60)
CTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTAC > SRR4302540.8515134/1‑94 (MQ=60)
CTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTAC > SRR4302540.8423378/1‑94 (MQ=60)
TGGTGATTGCTGACAGCGGCGCTACGCCTGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACT < SRR4302540.5796443/94‑1 (MQ=60)
GGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTG < SRR4302540.6000752/94‑1 (MQ=60)
GTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGA < SRR4302540.4413071/94‑1 (MQ=60)
TGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAC < SRR4302540.7996644/94‑1 (MQ=60)
TGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAC < SRR4302540.10035844/94‑1 (MQ=60)
ATTGCTGACCGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGC < SRR4302540.7833390/94‑1 (MQ=60)
TTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCC < SRR4302540.5449521/94‑1 (MQ=60)
TTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGGGATTTTACTGACGCC > SRR4302540.3380709/1‑94 (MQ=60)
CTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGC > SRR4302540.2905310/1‑94 (MQ=60)
CTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGC > SRR4302540.1729746/1‑94 (MQ=60)
TGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCT > SRR4302540.8507024/1‑94 (MQ=60)
TGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCT < SRR4302540.9545437/94‑1 (MQ=60)
TGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCT < SRR4302540.1573048/94‑1 (MQ=60)
TGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCT < SRR4302540.319126/94‑1 (MQ=60)
AGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTG > SRR4302540.2595778/1‑94 (MQ=60)
GCGGCGCTGCGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGA < SRR4302540.4271683/94‑1 (MQ=60)
CGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGAT < SRR4302540.4551446/94‑1 (MQ=60)
CGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGAT < SRR4302540.4554041/94‑1 (MQ=60)
GCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATAT < SRR4302540.8457698/94‑1 (MQ=60)
GCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATAT < SRR4302540.9345981/94‑1 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG < SRR4302540.143721/94‑1 (MQ=60)
TACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCG < SRR4302540.3606472/94‑1 (MQ=60)
GCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGT > SRR4302540.8984052/1‑94 (MQ=60)
CCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTC > SRR4302540.1365969/1‑94 (MQ=60)
CCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTC > SRR4302540.3975239/1‑94 (MQ=60)
CGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCG > SRR4302540.2758813/1‑94 (MQ=60)
GGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGC < SRR4302540.3883351/94‑1 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGGTTCACAGGGGATTTTACTGACGCCCCCTGATGATATCGCGCTTCGAGT > SRR4302540.6899840/1‑94 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGT > SRR4302540.6899839/1‑94 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGT > SRR4302540.4424408/1‑94 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCCCGT > SRR4302540.6444121/1‑94 (MQ=60)
ATTGCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGT < SRR4302540.2152690/94‑1 (MQ=60)
TTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTG < SRR4302540.1430999/94‑1 (MQ=60)
TTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTG < SRR4302540.3191838/94‑1 (MQ=60)
CGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCC < SRR4302540.5258183/94‑1 (MQ=60)
CGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCC < SRR4302540.5471451/94‑1 (MQ=60)
CGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCC < SRR4302540.2585134/94‑1 (MQ=60)
GGCTTCTGATTTCCCCTCTAAGGCTGAACCCGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAG < SRR4302540.4958086/94‑1 (MQ=60)
CTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGC > SRR4302540.9414769/1‑94 (MQ=60)
TGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTC < SRR4302540.7091687/94‑1 (MQ=60)
TGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTC > SRR4302540.4586653/1‑94 (MQ=60)
GATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCG < SRR4302540.7102654/94‑1 (MQ=60)
TTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAA < SRR4302540.8873445/94‑1 (MQ=60)
TTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGCTATGGCGCGTCGCGTTGCCGAGGCCGCCGGAC > SRR4302540.1604537/1‑94 (MQ=60)
TTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC < SRR4302540.2618922/94‑1 (MQ=60)
TTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC < SRR4302540.5587756/94‑1 (MQ=60)
TTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC < SRR4302540.810127/94‑1 (MQ=60)
GCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGC > SRR4302540.4623963/1‑94 (MQ=60)
GCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGC > SRR4302540.5193691/1‑94 (MQ=60)
CCCTCTCAGGCTGAACACGGCCCGGACTCCCAGGTGATTTTACTGACGCCCGCTGCTGATATGGTGCGTCGCGTTGCCGAGGCCGTCGAACGCA > SRR4302540.945656/1‑94 (MQ=60)
CCCTCTCAGGCGGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGTCCGTCGAACGCC < SRR4302540.6675429/94‑1 (MQ=60)
CCTCTCAGGCTTAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCC > SRR4302540.400507/1‑94 (MQ=60)
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GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > NC_000913/2089797‑2089981
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
