Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,195,623	T→C	intergenic (+1270/‑2676)	metG → / → yehI	methionine tRNA synthetase/putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,195,623	0	T	C	100.0%	1282.1 / NA	391	intergenic (+1270/‑2676)	metG/yehI	methionine tRNA synthetase/putative regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (184/207); total (184/207)

Only 100 of 400 total aligned reads displayed.

ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC  >  NC_000913/2195533‑2195712

 tgaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCAtt                                                                                        >  2:9191023/1‑93 (MQ=255)

  gaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTa                                                                                       <  1:6935418/93‑1 (MQ=255)

   aGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAc                                                                                      <  1:6352457/93‑1 (MQ=255)

    gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa                                                                                     >  1:3600581/1‑93 (MQ=255)

    gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa                                                                                     <  1:2781745/93‑1 (MQ=255)

     cacaTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAg                                                                                    <  1:7437880/93‑1 (MQ=255)

       caTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGa                                                                                  <  2:4084395/93‑1 (MQ=255)

        aTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAg                                                                                 >  2:860023/1‑93 (MQ=255)

         ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc                                                                                >  1:8309289/1‑93 (MQ=255)

         ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc                                                                                >  1:665224/1‑93 (MQ=255)

         ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc                                                                                >  1:2887542/1‑93 (MQ=255)

          tCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCa                                                                               >  1:805286/1‑93 (MQ=255)

           cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa                                                                              <  1:2204999/93‑1 (MQ=255)

           cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa                                                                              <  1:2008914/93‑1 (MQ=255)

           cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa                                                                              >  2:26257/1‑93 (MQ=255)

            ttGCCTCATTCGAAAAATATCACGCACTATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCAAAGCATTACAGGAGcccg                                                                             <  2:1679921/93‑4 (MQ=255)

            ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg                                                                             <  1:935861/93‑1 (MQ=255)

            ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg                                                                             <  1:5415418/93‑1 (MQ=255)

            ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCA‑CGCATTACAGGGGCAAgg                                                                            >  2:2882486/1‑93 (MQ=255)

              gCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgt                                                                           <  2:3090919/93‑1 (MQ=255)

              gCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgt                                                                           >  2:9635759/1‑93 (MQ=255)

                cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt                                                                         <  2:3815343/93‑1 (MQ=255)

                cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt                                                                         >  2:7770630/1‑93 (MQ=255)

                 tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt                                                                        <  1:9039667/93‑1 (MQ=255)

                 tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt                                                                        <  2:4659357/93‑1 (MQ=255)

                 tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt                                                                        >  2:7078263/1‑93 (MQ=255)

                 tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt                                                                        >  2:8354032/1‑93 (MQ=255)

                   cttAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCCCCGCATTACAGGAGCAAGGTGTTGc                                                                      <  1:10041374/92‑1 (MQ=255)

                     tAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAg                                                                    >  2:4333314/1‑93 (MQ=255)

                     tAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAg                                                                    <  2:2190502/93‑1 (MQ=255)

                     tAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAg                                                                    >  2:8279731/1‑93 (MQ=255)

                      aGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCCCCGCATTACAGGAGCAAGGTGTTGCAGc                                                                   <  1:6762008/93‑1 (MQ=255)

                        aaaaaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGccc                                                                 <  1:592114/93‑1 (MQ=255)

                        aaaaaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGccc                                                                 <  2:6772485/93‑1 (MQ=255)

                           aaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGc                                                              <  2:627671/93‑1 (MQ=255)

                            atatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGcc                                                             <  2:1168634/93‑1 (MQ=255)

                            atatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGcc                                                             <  2:9495502/93‑1 (MQ=255)

                             tatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGccc                                                            <  2:8424720/93‑1 (MQ=255)

                               tCACGAACCATATGCCATTTTTGATGATTACTATTGTAGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCg                                                          >  1:9803679/1‑93 (MQ=255)

                                  cGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAtt                                                       >  2:9344626/1‑93 (MQ=255)

                                  cGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAtt                                                       <  2:9875014/93‑1 (MQ=255)

                                   gAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAttt                                                      <  2:4484896/93‑1 (MQ=255)

                                     aCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGc                                                    >  2:890651/1‑93 (MQ=255)

                                         tatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTccc                                                >  1:3701561/1‑93 (MQ=255)

                                          atGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCt                                               <  1:890005/93‑1 (MQ=255)

                                           tGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTa                                              <  2:3320299/93‑1 (MQ=255)

                                           tGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTa                                              <  2:5882284/93‑1 (MQ=255)

                                           tGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTa                                              >  1:9943821/1‑93 (MQ=255)

                                           tGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTa                                              <  1:4464813/93‑1 (MQ=255)

                                            gCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAt                                             <  2:7691697/93‑1 (MQ=255)

                                             ccATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATg                                            >  1:2411032/1‑93 (MQ=255)

                                              cATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGACCCGATTTGCTCCCTATGc                                           >  1:1905856/1‑93 (MQ=255)

                                               aTTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGcc                                          >  1:5812607/1‑93 (MQ=255)

                                                tttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCg                                         >  1:6510392/1‑93 (MQ=255)

                                                 ttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGc                                        >  1:4024756/1‑93 (MQ=255)

                                                   ttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCaa                                      <  1:9401773/93‑1 (MQ=255)

                                                    tgatgaTTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAg                                     <  1:9299853/93‑1 (MQ=255)

                                                    tgatgaTTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAg                                     <  2:7122056/93‑1 (MQ=255)

                                                    tgatgaTTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAg                                     <  1:5054873/93‑1 (MQ=255)

                                                    tgatgaTTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAg                                     >  1:9658765/1‑93 (MQ=255)

                                                     gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt                                    <  2:3405873/93‑1 (MQ=255)

                                                      atgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTg                                   <  1:9871112/93‑1 (MQ=255)

                                                       tgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGa                                  <  2:1551745/93‑1 (MQ=255)

                                                       tgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAAGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGa                                  >  1:7628551/1‑93 (MQ=255)

                                                        gatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGac                                 <  2:2056907/93‑1 (MQ=255)

                                                        gatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGac                                 >  1:6461228/1‑93 (MQ=255)

                                                         atTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGact                                >  2:5470346/1‑93 (MQ=255)

                                                         atTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGact                                >  1:9103044/1‑93 (MQ=255)

                                                          ttACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGacta                               <  2:2337987/93‑1 (MQ=255)

                                                          ttACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGacta                               >  2:4791344/1‑93 (MQ=255)

                                                           tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac                              <  1:1544021/93‑1 (MQ=255)

                                                           tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac                              <  2:9019458/93‑1 (MQ=255)

                                                            tcTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact                             <  1:435770/92‑1 (MQ=255)

                                                            aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact                             >  1:133087/1‑93 (MQ=255)

                                                            aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact                             <  1:3377300/93‑1 (MQ=255)

                                                            aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact                             <  2:6558930/93‑1 (MQ=255)

                                                            aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact                             <  1:7044252/93‑1 (MQ=255)

                                                              tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc                           >  2:9800296/1‑93 (MQ=255)

                                                              tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc                           >  2:1329228/1‑93 (MQ=255)

                                                               aTTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgcg                          >  2:1806104/1‑93 (MQ=255)

                                                                ttGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgcgc                         <  2:8063863/93‑1 (MQ=255)

                                                                ttGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgcgc                         >  2:3616438/1‑93 (MQ=255)

                                                                ttGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgcgc                         >  1:8558602/1‑93 (MQ=255)

                                                                    ggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAt                     >  2:6027905/1‑93 (MQ=255)

                                                                         gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt                >  2:3494177/1‑93 (MQ=255)

                                                                         gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt                <  1:8260402/93‑1 (MQ=255)

                                                                            atGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCg             >  2:5036376/1‑93 (MQ=255)

                                                                              ggTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTc           >  1:5654276/1‑93 (MQ=255)

                                                                                 cAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata        <  1:1620629/93‑1 (MQ=255)

                                                                                 cAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata        <  2:5391369/93‑1 (MQ=255)

                                                                                  aGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat       <  1:3892154/93‑1 (MQ=255)

                                                                                   gCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatc      <  2:7232099/93‑1 (MQ=255)

                                                                                   gCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatc      >  1:8799148/1‑93 (MQ=255)

                                                                                   gCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatc      <  2:6869639/93‑1 (MQ=255)

                                                                                    ccACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatca     >  2:7889853/1‑93 (MQ=255)

                                                                                     cACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaa    <  1:7184578/93‑1 (MQ=255)

                                                                                      cccGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat   <  1:4800233/92‑1 (MQ=255)

                                                                                      aCCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat   <  1:7341311/93‑1 (MQ=255)

                                                                                       ccGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaatc  >  1:2135264/1‑93 (MQ=255)

                                                                                       ccGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaatc  <  1:2099026/93‑1 (MQ=255)

ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC  >  NC_000913/2195533‑2195712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.

CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC  >  NC_000913/2195530‑2195716

CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGC                                                                                               <  SRR4302540.9012695/94‑1 (MQ=60)

 TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA                                                                                              >  SRR4302540.2879966/1‑94 (MQ=60)

 TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA                                                                                              >  SRR4302540.8127033/1‑94 (MQ=60)

 TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA                                                                                              >  SRR4302540.7337995/1‑94 (MQ=60)

   ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCTATATGGTCAGCCACCGCATT                                                                                            <  SRR4302540.9858384/94‑1 (MQ=60)

   ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATT                                                                                            >  SRR4302540.6801896/1‑94 (MQ=60)

   ATGAGCACATTCTTGACTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATT                                                                                            <  SRR4302540.3864502/94‑1 (MQ=60)

    TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTA                                                                                           <  SRR4302540.8398932/94‑1 (MQ=60)

    TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTA                                                                                           >  SRR4302540.656147/1‑94 (MQ=60)

     GAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAC                                                                                          <  SRR4302540.7012613/94‑1 (MQ=60)

     GAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAC                                                                                          <  SRR4302540.7463501/94‑1 (MQ=60)

     GAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAC                                                                                          <  SRR4302540.6215614/94‑1 (MQ=60)

      AGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACA                                                                                         <  SRR4302540.8930254/94‑1 (MQ=60)

      AGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACA                                                                                         <  SRR4302540.6423202/94‑1 (MQ=60)

      AGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACA                                                                                         >  SRR4302540.3639930/1‑94 (MQ=60)

      AGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACA                                                                                         >  SRR4302540.3639929/1‑94 (MQ=60)

       TCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG                                                                                        <  SRR4302540.1225322/94‑1 (MQ=60)

       GCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG                                                                                        <  SRR4302540.2811796/94‑1 (MQ=60)

        CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG                                                                                       <  SRR4302540.994739/94‑1 (MQ=60)

        CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG                                                                                       <  SRR4302540.9187202/94‑1 (MQ=60)

        CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG                                                                                       <  SRR4302540.8128190/94‑1 (MQ=60)

        CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG                                                                                       <  SRR4302540.7520754/94‑1 (MQ=60)

         ACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGA                                                                                      <  SRR4302540.1796861/94‑1 (MQ=60)

         ACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGA                                                                                      >  SRR4302540.2151670/1‑94 (MQ=60)

          CATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAG                                                                                     <  SRR4302540.9016045/94‑1 (MQ=60)

           ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    >  SRR4302540.8288401/1‑94 (MQ=60)

           ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    >  SRR4302540.8390898/1‑94 (MQ=60)

           ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    >  SRR4302540.2918986/1‑94 (MQ=60)

           ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    >  SRR4302540.672356/1‑94 (MQ=60)

           ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    >  SRR4302540.8405755/1‑94 (MQ=60)

           ATTCTTGCCGCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC                                                                                    <  SRR4302540.7128906/94‑1 (MQ=60)

            TTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGNTNNGCCACCGCATTANAGGANCN                                                                                   >  SRR4302540.2574246/1‑94 (MQ=60)

            TTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGNTNAGCCACCGCATTACAGGAGCA                                                                                   >  SRR4302540.2574245/1‑94 (MQ=60)

            TTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCA                                                                                   >  SRR4302540.813841/1‑94 (MQ=60)

              CTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAG                                                                                 <  SRR4302540.2228820/94‑1 (MQ=60)

              CTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAG                                                                                 <  SRR4302540.2030644/94‑1 (MQ=60)

               TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG                                                                                <  SRR4302540.945671/94‑1 (MQ=60)

               TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG                                                                                <  SRR4302540.5474964/94‑1 (MQ=60)

               TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG                                                                                <  SRR4302540.945672/94‑1 (MQ=60)

               TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG                                                                                <  SRR4302540.7487253/94‑1 (MQ=60)

                TGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGT                                                                               >  SRR4302540.4367825/1‑94 (MQ=60)

                TGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGT                                                                               >  SRR4302540.2070937/1‑94 (MQ=60)

                TGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGT                                                                               >  SRR4302540.9026973/1‑94 (MQ=60)

                TGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGG                                                                               >  SRR4302540.6878219/1‑94 (MQ=60)

                  CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT                                                                             <  SRR4302540.6554168/94‑1 (MQ=60)

                  CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT                                                                             <  SRR4302540.1934274/94‑1 (MQ=60)

                   CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT                                                                            <  SRR4302540.2788247/94‑1 (MQ=60)

                   CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT                                                                            <  SRR4302540.46307/94‑1 (MQ=60)

                   CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT                                                                            >  SRR4302540.1380772/1‑94 (MQ=60)

                    TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG                                                                           <  SRR4302540.9148173/94‑1 (MQ=60)

                    TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG                                                                           >  SRR4302540.9474440/1‑94 (MQ=60)

                     CATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGC                                                                          <  SRR4302540.9233528/94‑1 (MQ=60)

                     CATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGC                                                                          >  SRR4302540.9191776/1‑94 (MQ=60)

                      CTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCCCCGCATTACAGGAGCAAGGTGTTGCA                                                                         <  SRR4302540.10158125/94‑1 (MQ=60)

                      ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA                                                                         >  SRR4302540.9465511/1‑94 (MQ=60)

                      ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA                                                                         >  SRR4302540.9417881/1‑94 (MQ=60)

                      ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA                                                                         >  SRR4302540.9465510/1‑94 (MQ=60)

                      ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA                                                                         <  SRR4302540.2128717/94‑1 (MQ=60)

                      ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA                                                                         <  SRR4302540.6914020/94‑1 (MQ=60)

                       TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG                                                                        >  SRR4302540.8100073/1‑94 (MQ=60)

                       TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG                                                                        >  SRR4302540.3451503/1‑94 (MQ=60)

                       TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG                                                                        >  SRR4302540.1964947/1‑94 (MQ=60)

                       TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG                                                                        <  SRR4302540.8504578/94‑1 (MQ=60)

                       TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG                                                                        >  SRR4302540.7294680/1‑94 (MQ=60)

                         AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCCCCGCATTACAGGAGCAAGGTGTTGCAGCC                                                                      <  SRR4302540.6836741/94‑1 (MQ=60)

                         AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC                                                                      <  SRR4302540.4551513/94‑1 (MQ=60)

                         AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC                                                                      <  SRR4302540.4551778/94‑1 (MQ=60)

                          GAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCC                                                                     <  SRR4302540.5412088/94‑1 (MQ=60)

                           AAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCT                                                                    <  SRR4302540.1901562/94‑1 (MQ=60)

                           AAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCT                                                                    <  SRR4302540.3231589/94‑1 (MQ=60)

                            AAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTG                                                                   >  SRR4302540.5833445/1‑94 (MQ=60)

                            AAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGCTGTTGCAGCCCTG                                                                   >  SRR4302540.5833447/1‑94 (MQ=60)

                             AAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGC                                                                  >  SRR4302540.2912100/1‑94 (MQ=60)

                              AATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCATGGTGTTGCAGCCCTGCC                                                                 >  SRR4302540.9067252/1‑94 (MQ=60)

                              AATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCC                                                                 >  SRR4302540.231673/1‑94 (MQ=60)

                               ATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCC                                                                <  SRR4302540.4892853/94‑1 (MQ=60)

                                TATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCC                                                               <  SRR4302540.5609332/94‑1 (MQ=60)

                                 ATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCG                                                              <  SRR4302540.2211609/94‑1 (MQ=60)

                                 ATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCG                                                              >  SRR4302540.9918443/1‑94 (MQ=60)

                                 ATCACGAACCATATGCCATTTTTGATGATTACTATTGTAGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCG                                                              >  SRR4302540.9918442/1‑94 (MQ=60)

                                   CACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAT                                                            >  SRR4302540.368137/1‑94 (MQ=60)

                                   CACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAT                                                            >  SRR4302540.248320/1‑94 (MQ=60)

                                     CGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCGCCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTT                                                          <  SRR4302540.6004858/94‑1 (MQ=60)

                                         CCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTC                                                      <  SRR4302540.1970438/94‑1 (MQ=60)

                                          CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC                                                     <  SRR4302540.1074425/94‑1 (MQ=60)

                                          CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC                                                     >  SRR4302540.6522142/1‑94 (MQ=60)

                                           ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC                                                    >  SRR4302540.211717/1‑94 (MQ=60)

                                           ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC                                                    >  SRR4302540.3741970/1‑94 (MQ=60)

                                            TATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCT                                                   <  SRR4302540.8831709/94‑1 (MQ=60)

                                             ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA                                                  <  SRR4302540.899462/94‑1 (MQ=60)

                                             ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA                                                  >  SRR4302540.10059942/1‑94 (MQ=60)

                                             ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA                                                  <  SRR4302540.6731628/94‑1 (MQ=60)

                                             ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA                                                  >  SRR4302540.3737874/1‑94 (MQ=60)

                                             ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA                                                  >  SRR4302540.10059944/1‑94 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.6579129/94‑1 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.6609878/94‑1 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.4513215/94‑1 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.9864109/94‑1 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.6463130/94‑1 (MQ=60)

                                              TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT                                                 <  SRR4302540.4513214/94‑1 (MQ=60)

                                               GCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATG                                                >  SRR4302540.9744288/1‑94 (MQ=60)

                                               GCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATG                                                >  SRR4302540.2437022/1‑94 (MQ=60)

                                                CCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGACCCGATTTGCTCCCTATGC                                               >  SRR4302540.1926688/1‑94 (MQ=60)

                                                CCATTTTTGATGATTACTATTGTGGGGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGC                                               >  SRR4302540.6939009/1‑94 (MQ=60)

                                                 CATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCC                                              <  SRR4302540.9491734/94‑1 (MQ=60)

                                                 CATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCC                                              >  SRR4302540.5876850/1‑94 (MQ=60)

                                                  ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCCCCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG                                             >  SRR4302540.4172105/1‑94 (MQ=60)

                                                  ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG                                             >  SRR4302540.6582730/1‑94 (MQ=60)

                                                  ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG                                             >  SRR4302540.7505398/1‑94 (MQ=60)

                                                  ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG                                             <  SRR4302540.5678742/94‑1 (MQ=60)

                                                   TTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGC                                            >  SRR4302540.4068145/1‑94 (MQ=60)

                                                    TTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCA                                           <  SRR4302540.5435731/94‑1 (MQ=60)

                                                    TTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCA                                           <  SRR4302540.3939174/94‑1 (MQ=60)

                                                    TTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCA                                           <  SRR4302540.3939173/94‑1 (MQ=60)

                                                     TTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAA                                          >  SRR4302540.5624648/1‑94 (MQ=60)

                                                      TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG                                         <  SRR4302540.2349950/94‑1 (MQ=60)

                                                      TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG                                         <  SRR4302540.9513617/94‑1 (MQ=60)

                                                      TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG                                         >  SRR4302540.9772463/1‑94 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        >  SRR4302540.5017533/1‑94 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.5109521/94‑1 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.7276674/94‑1 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.9410946/94‑1 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.3227119/94‑1 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.4132562/94‑1 (MQ=60)

                                                       TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT                                        <  SRR4302540.7024731/94‑1 (MQ=60)

                                                        GATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTG                                       <  SRR4302540.9409242/94‑1 (MQ=60)

                                                        GATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTG                                       <  SRR4302540.668714/94‑1 (MQ=60)

                                                         ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA                                      <  SRR4302540.9986400/94‑1 (MQ=60)

                                                         ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA                                      >  SRR4302540.7714344/1‑94 (MQ=60)

                                                         ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA                                      <  SRR4302540.9986399/94‑1 (MQ=60)

                                                         ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAAGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA                                      >  SRR4302540.7714345/1‑94 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     >  SRR4302540.5933609/1‑94 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     <  SRR4302540.8651966/94‑1 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     <  SRR4302540.8651965/94‑1 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     >  SRR4302540.8191568/1‑94 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     >  SRR4302540.9359452/1‑94 (MQ=60)

                                                          TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC                                     >  SRR4302540.6533139/1‑94 (MQ=60)

                                                           GATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACT                                    <  SRR4302540.288248/94‑1 (MQ=60)

                                                           GATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACT                                    >  SRR4302540.9212429/1‑94 (MQ=60)

                                                            ATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTA                                   >  SRR4302540.44703/1‑94 (MQ=60)

                                                            ATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTA                                   >  SRR4302540.9699471/1‑94 (MQ=60)

                                                             TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC                                  >  SRR4302540.5933784/1‑94 (MQ=60)

                                                             TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC                                  >  SRR4302540.6644418/1‑94 (MQ=60)

                                                             TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC                                  <  SRR4302540.4039550/94‑1 (MQ=60)

                                                              TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT                                 >  SRR4302540.134482/1‑94 (MQ=60)

                                                              TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT                                 <  SRR4302540.1561070/94‑1 (MQ=60)

                                                              TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT                                 <  SRR4302540.6495502/94‑1 (MQ=60)

                                                               TCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG                                <  SRR4302540.440389/94‑1 (MQ=60)

                                                               TCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG                                <  SRR4302540.2215916/94‑1 (MQ=60)

                                                               ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG                                <  SRR4302540.7122576/94‑1 (MQ=60)

                                                               ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG                                <  SRR4302540.3414192/94‑1 (MQ=60)

                                                               ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG                                >  SRR4302540.3468249/1‑94 (MQ=60)

                                                                CTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGC                               <  SRR4302540.1427712/94‑1 (MQ=60)

                                                                CTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGC                               <  SRR4302540.534833/94‑1 (MQ=60)

                                                                 TATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCG                              <  SRR4302540.3872520/94‑1 (MQ=60)

                                                                  ATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGC                             >  SRR4302540.8658007/1‑94 (MQ=60)

                                                                   TTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCC                            >  SRR4302540.9807929/1‑94 (MQ=60)

                                                                   TTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCC                            <  SRR4302540.8923766/94‑1 (MQ=60)

                                                                   TTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCC                            >  SRR4302540.3119051/1‑94 (MQ=60)

                                                                    TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCG                           >  SRR4302540.7262932/1‑94 (MQ=60)

                                                                    TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCG                           >  SRR4302540.8035330/1‑94 (MQ=60)

                                                                    TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCGGCCCCGATTTGCTCCCGATGCCGCAAGTGACTACTGCGCCG                           <  SRR4302540.10055237/94‑1 (MQ=60)

                                                                      TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT                         <  SRR4302540.5916455/94‑1 (MQ=60)

                                                                      TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT                         <  SRR4302540.7677867/94‑1 (MQ=60)

                                                                      AGGTGCGATATGGTCAGCCACCGCATTCCAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT                         <  SRR4302540.6884049/94‑1 (MQ=60)

                                                                       GGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATG                        >  SRR4302540.8398064/1‑94 (MQ=60)

                                                                        GTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGT                       >  SRR4302540.1621494/1‑94 (MQ=60)

                                                                        GTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGT                       <  SRR4302540.8920123/94‑1 (MQ=60)

                                                                        GTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGT                       >  SRR4302540.1621493/1‑94 (MQ=60)

                                                                        GTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGT                       >  SRR4302540.1895804/1‑94 (MQ=60)

                                                                         gtggataatggtgaCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTG                      <  SRR4302540.3703489/80‑1 (MQ=60)

                                                                         TGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTG                      >  SRR4302540.7409778/1‑94 (MQ=60)

                                                                         TGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTG                      <  SRR4302540.632858/94‑1 (MQ=60)

                                                                         TGCGATATGCGCAGCCACCGCATTACAGGAGCAAGGTGGTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTG                      <  SRR4302540.1496507/94‑1 (MQ=60)

                                                                            GATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTG                   >  SRR4302540.163231/1‑94 (MQ=60)

                                                                            GATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTG                   <  SRR4302540.8356392/94‑1 (MQ=60)

                                                                             ATATGGTCAGCCACCGCATTACAGGAGCGAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGC                  <  SRR4302540.7190620/94‑1 (MQ=60)

                                                                             ATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGC                  <  SRR4302540.8884703/94‑1 (MQ=60)

                                                                               ATGGTCAGCCACCGCATTACAGGAGCAAGGGGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGGGGTGTTGCGT                >  SRR4302540.3474389/1‑94 (MQ=60)

                                                                                TGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTC               <  SRR4302540.9556863/94‑1 (MQ=60)

                                                                                TGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTC               >  SRR4302540.5716527/1‑94 (MQ=60)

                                                                                TGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTC               <  SRR4302540.2430158/94‑1 (MQ=60)

                                                                                    CAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATAT           <  SRR4302540.1638393/94‑1 (MQ=60)

                                                                                    CAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATAT           <  SRR4302540.7105862/94‑1 (MQ=60)

                                                                                    CAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATAT           <  SRR4302540.3781821/94‑1 (MQ=60)

                                                                                     CGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACGGCGCCGATGTGTTGCGTCATATC          <  SRR4302540.8855462/94‑1 (MQ=60)

                                                                                     AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC          <  SRR4302540.2852338/94‑1 (MQ=60)

                                                                                     AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC          <  SRR4302540.5876110/94‑1 (MQ=60)

                                                                                     AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC          >  SRR4302540.8900884/1‑94 (MQ=60)

                                                                                     AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC          <  SRR4302540.1301528/94‑1 (MQ=60)

                                                                                     AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC          <  SRR4302540.3934408/94‑1 (MQ=60)

                                                                                      GCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCA         <  SRR4302540.4990647/94‑1 (MQ=60)

                                                                                        CACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAAT       <  SRR4302540.7264671/94‑1 (MQ=60)

                                                                                        CACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAAT       >  SRR4302540.2123465/1‑94 (MQ=60)

                                                                                         ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC      <  SRR4302540.7423230/94‑1 (MQ=60)

                                                                                         ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC      >  SRR4302540.2158191/1‑94 (MQ=60)

                                                                                         ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC      >  SRR4302540.2158190/1‑94 (MQ=60)

                                                                                          CCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCA     <  SRR4302540.7620947/94‑1 (MQ=60)

                                                                                          CCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCA     <  SRR4302540.2121560/94‑1 (MQ=60)

                                                                                             CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATAC  >  SRR4302540.5589281/1‑94 (MQ=60)

CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC  >  NC_000913/2195530‑2195716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`