Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,195,623 |
T→C |
intergenic (+1270/‑2676) |
metG → / → yehI |
methionine tRNA synthetase/putative regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,195,623 | 0 | T | C | 100.0%
| 712.6
/ NA
| 219 | intergenic (+1270/‑2676) | metG/yehI | methionine tRNA synthetase/putative regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/95); total (124/95) |
Only 100 of 222 total aligned reads displayed.
TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > NC_000913/2195534‑2195712
|
tgaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCAtt > 1:5238883/1‑93 (MQ=255)
gaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTa > 1:4101081/1‑93 (MQ=255)
gaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTa > 2:5319523/1‑93 (MQ=255)
gaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTa > 1:990221/1‑93 (MQ=255)
aGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAc > 2:5925038/1‑93 (MQ=255)
aGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAc > 2:2709714/1‑93 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTCCTATTGTGGTGCGATATGGTCAGCCACCGCATTACa < 2:6103722/93‑1 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa < 1:789742/93‑1 (MQ=255)
cacaTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAg > 2:3706588/1‑93 (MQ=255)
acaTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAgg < 2:5788760/93‑1 (MQ=255)
caTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGACACCGCATTACAGGa > 2:6145989/1‑93 (MQ=255)
ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc < 2:2550569/93‑1 (MQ=255)
ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc > 1:4839048/1‑93 (MQ=255)
cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa < 2:3669079/93‑1 (MQ=255)
ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg > 2:3939188/1‑93 (MQ=255)
ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg > 1:4562719/1‑93 (MQ=255)
ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg < 1:1359832/93‑1 (MQ=255)
gCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgt < 2:6231148/93‑1 (MQ=255)
gCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgt > 2:6299195/1‑93 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt > 1:6000287/1‑93 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt < 2:544188/93‑1 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt > 2:143188/1‑93 (MQ=255)
tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt < 2:4163971/93‑1 (MQ=255)
tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt > 1:348833/1‑93 (MQ=255)
tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt < 1:351240/93‑1 (MQ=255)
cATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTg > 1:5183478/1‑93 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc > 1:6132586/1‑93 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc < 2:4496211/93‑1 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc < 2:70438/93‑1 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc < 2:200660/93‑1 (MQ=255)
ttAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCa < 1:2516589/93‑1 (MQ=255)
ttAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCa < 2:1242636/93‑1 (MQ=255)
tAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAg > 1:3283085/1‑93 (MQ=255)
aGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGc > 1:2969196/1‑93 (MQ=255)
aGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGc > 2:5394228/1‑93 (MQ=255)
aaaaaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATCACAGGAGCAAGGTGTTGCAGccc < 2:482560/93‑1 (MQ=255)
aaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGc > 2:1118611/1‑93 (MQ=255)
atatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGcc > 1:4508256/1‑93 (MQ=255)
tatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGccc > 2:1331505/1‑93 (MQ=255)
cACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGa > 2:2537273/1‑93 (MQ=255)
gAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAttt > 1:2987783/1‑93 (MQ=255)
aaCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTg < 2:803273/93‑1 (MQ=255)
aaCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTg < 1:2851231/93‑1 (MQ=255)
aaCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTg > 2:4377259/1‑93 (MQ=255)
aCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGc > 1:4705670/1‑93 (MQ=255)
ccATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCt > 2:3390284/1‑93 (MQ=255)
cATATGCCATTTTTGATGATTCCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTc < 1:5846096/93‑1 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTcc < 1:3323791/93‑1 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTcc > 2:2378048/1‑93 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTcc > 1:3630981/1‑93 (MQ=255)
tatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTccc > 2:3181873/1‑93 (MQ=255)
tatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTccc > 1:1551412/1‑93 (MQ=255)
atGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCt < 1:4221204/93‑1 (MQ=255)
atGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCt > 2:3202738/1‑93 (MQ=255)
gCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAt > 1:3147291/1‑93 (MQ=255)
cATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGc < 1:4975577/93‑1 (MQ=255)
tttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCg > 1:2197351/1‑93 (MQ=255)
tttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCg > 2:5624004/1‑93 (MQ=255)
ttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGc > 1:2336239/1‑93 (MQ=255)
tttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCa > 2:5124051/1‑93 (MQ=255)
tttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCa < 1:182326/93‑1 (MQ=255)
ttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCaa < 1:3668959/93‑1 (MQ=255)
gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt > 1:5763594/1‑93 (MQ=255)
gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt > 1:2096121/1‑93 (MQ=255)
atgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTg > 1:1398332/1‑93 (MQ=255)
tgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGa > 2:2820851/1‑93 (MQ=255)
gatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGac > 1:493662/1‑93 (MQ=255)
atTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGact < 2:3646976/93‑1 (MQ=255)
atTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGact > 1:5534365/1‑93 (MQ=255)
ttACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGacta < 1:265209/93‑1 (MQ=255)
tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac > 1:6032256/1‑93 (MQ=255)
tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac < 2:5851392/93‑1 (MQ=255)
aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact < 1:3562676/93‑1 (MQ=255)
cTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTg > 1:2302149/1‑93 (MQ=255)
tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc > 2:5691271/1‑93 (MQ=255)
tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc > 1:146145/1‑93 (MQ=255)
aTTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgcg < 2:5501121/93‑1 (MQ=255)
gtggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCg > 1:2564652/1‑93 (MQ=255)
gtggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCg < 2:5438080/93‑1 (MQ=255)
gtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAtg < 2:5747086/93‑1 (MQ=255)
gCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAtgtg > 2:2893093/1‑93 (MQ=255)
cGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATgtgt < 1:3946021/93‑1 (MQ=255)
cGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATgtgt < 1:3855892/93‑1 (MQ=255)
gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt < 1:1961635/93‑1 (MQ=255)
gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt > 1:3589883/1‑93 (MQ=255)
tatGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGc < 2:4871938/93‑1 (MQ=255)
tGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGTCTACTGCGCCGATGTGTTGCGt > 2:1498164/1‑93 (MQ=255)
ggTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTc < 1:5403178/93‑1 (MQ=255)
ggTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTc < 2:4444098/93‑1 (MQ=255)
ggTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTc > 2:2090132/1‑93 (MQ=255)
tCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCat > 2:1512478/1‑93 (MQ=255)
cAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata < 2:4348038/93‑1 (MQ=255)
cAGCCACCACATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata < 2:2062481/93‑1 (MQ=255)
aGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat > 1:1026379/1‑93 (MQ=255)
aGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat < 1:2906260/93‑1 (MQ=255)
aGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat < 2:918324/93‑1 (MQ=255)
ccACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatca > 1:4646735/1‑93 (MQ=255)
cccGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat < 1:4040602/92‑1 (MQ=255)
aCCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat > 1:5384852/1‑93 (MQ=255)
ccGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaatc < 2:5995799/93‑1 (MQ=255)
|
TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > NC_000913/2195534‑2195712
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > NC_000913/2195531‑2195716
|
TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA > SRR4302533.2886677/1‑94 (MQ=60)
TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA > SRR4302533.1861275/1‑94 (MQ=60)
GATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCAT < SRR4302533.6215474/94‑1 (MQ=60)
ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATT > SRR4302533.5270382/1‑94 (MQ=60)
TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTA > SRR4302533.996013/1‑94 (MQ=60)
TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTA > SRR4302533.4126038/1‑94 (MQ=60)
accccTTCTTGCCTCAATAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG < SRR4302533.2920661/89‑1 (MQ=60)
GCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG > SRR4302533.977012/1‑94 (MQ=60)
GCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG < SRR4302533.794391/94‑1 (MQ=60)
ACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGA < SRR4302533.2812376/94‑1 (MQ=60)
ACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGA < SRR4302533.3533614/94‑1 (MQ=60)
ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC < SRR4302533.1705850/94‑1 (MQ=60)
ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC > SRR4302533.4868378/1‑94 (MQ=60)
TCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAA > SRR4302533.1396111/1‑94 (MQ=60)
TCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAA < SRR4302533.5418548/94‑1 (MQ=60)
CTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAG > SRR4302533.4590388/1‑94 (MQ=60)
TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG < SRR4302533.1368003/94‑1 (MQ=60)
TGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGT > SRR4302533.1210272/1‑94 (MQ=60)
GCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTG > SRR4302533.6153370/1‑94 (MQ=60)
CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT > SRR4302533.3006153/1‑94 (MQ=60)
CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT > SRR4302533.6036633/1‑94 (MQ=60)
CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT < SRR4302533.5293594/94‑1 (MQ=60)
CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT > SRR4302533.3602043/1‑94 (MQ=60)
CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT > SRR4302533.350963/1‑94 (MQ=60)
TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG > SRR4302533.5873340/1‑94 (MQ=60)
TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG < SRR4302533.5522883/94‑1 (MQ=60)
TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG < SRR4302533.353382/94‑1 (MQ=60)
TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG > SRR4302533.4917923/1‑94 (MQ=60)
TCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTG > SRR4302533.5214771/1‑94 (MQ=60)
CATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGC > SRR4302533.6169534/1‑94 (MQ=60)
ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA < SRR4302533.3895956/94‑1 (MQ=60)
ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA < SRR4302533.523056/94‑1 (MQ=60)
TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG < SRR4302533.2532096/94‑1 (MQ=60)
TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG > SRR4302533.1493620/1‑94 (MQ=60)
TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG > SRR4302533.3303352/1‑94 (MQ=60)
TAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGC > SRR4302533.2987350/1‑94 (MQ=60)
AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC < SRR4302533.828090/94‑1 (MQ=60)
GAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCC > SRR4302533.1461265/1‑94 (MQ=60)
AAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCT < SRR4302533.3004818/94‑1 (MQ=60)
AAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCT > SRR4302533.198550/1‑94 (MQ=60)
AAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTG > SRR4302533.3534262/1‑94 (MQ=60)
AATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCC > SRR4302533.4535559/1‑94 (MQ=60)
ATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCC > SRR4302533.3943188/1‑94 (MQ=60)
TATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCC > SRR4302533.6200310/1‑94 (MQ=60)
ACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATT > SRR4302533.4756378/1‑94 (MQ=60)
ACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGCGTTGCAGCCCTGCCCCGATT > SRR4302533.4303642/1‑94 (MQ=60)
CGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTT > SRR4302533.3006060/1‑94 (MQ=60)
AACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGC > SRR4302533.6061208/1‑94 (MQ=60)
AACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGC > SRR4302533.4734188/1‑94 (MQ=60)
AACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGC < SRR4302533.2868773/94‑1 (MQ=60)
ACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCT < SRR4302533.3685817/94‑1 (MQ=60)
CATATGCCATTTTTGATGATTCCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC < SRR4302533.5881439/94‑1 (MQ=60)
CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC > SRR4302533.3653320/1‑94 (MQ=60)
ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC > SRR4302533.5881720/1‑94 (MQ=60)
ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC < SRR4302533.3344320/94‑1 (MQ=60)
ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC > SRR4302533.1560755/1‑94 (MQ=60)
TATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCGCCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCT < SRR4302533.466369/94‑1 (MQ=60)
TATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCT > SRR4302533.5325522/1‑94 (MQ=60)
ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA > SRR4302533.2568237/1‑94 (MQ=60)
ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA < SRR4302533.4246731/94‑1 (MQ=60)
TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT > SRR4302533.3166643/1‑94 (MQ=60)
GCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATG < SRR4302533.2935427/94‑1 (MQ=60)
CATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCC < SRR4302533.4116402/94‑1 (MQ=60)
CATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCC < SRR4302533.5005743/94‑1 (MQ=60)
ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG > SRR4302533.4577745/1‑94 (MQ=60)
ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG > SRR4302533.2210888/1‑94 (MQ=60)
TTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGC < SRR4302533.3642375/94‑1 (MQ=60)
TTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGC > SRR4302533.2350699/1‑94 (MQ=60)
TTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAA < SRR4302533.183459/94‑1 (MQ=60)
TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG < SRR4302533.3691509/94‑1 (MQ=60)
TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT > SRR4302533.2109026/1‑94 (MQ=60)
TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT > SRR4302533.1866470/1‑94 (MQ=60)
TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT > SRR4302533.3989336/1‑94 (MQ=60)
TGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGT > SRR4302533.5798379/1‑94 (MQ=60)
GATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTG > SRR4302533.1406759/1‑94 (MQ=60)
ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA > SRR4302533.2335473/1‑94 (MQ=60)
TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC < SRR4302533.2656989/94‑1 (MQ=60)
TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC > SRR4302533.496608/1‑94 (MQ=60)
TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC > SRR4302533.3261002/1‑94 (MQ=60)
GATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACT > SRR4302533.5567777/1‑94 (MQ=60)
ATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTA < SRR4302533.4522663/94‑1 (MQ=60)
TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC < SRR4302533.4132692/94‑1 (MQ=60)
TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC < SRR4302533.266822/94‑1 (MQ=60)
TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC > SRR4302533.6068814/1‑94 (MQ=60)
TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT > SRR4302533.5923999/1‑94 (MQ=60)
TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT < SRR4302533.3547396/94‑1 (MQ=60)
ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG > SRR4302533.2316412/1‑94 (MQ=60)
ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG < SRR4302533.3584627/94‑1 (MQ=60)
CTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGC > SRR4302533.147079/1‑94 (MQ=60)
TATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCG < SRR4302533.4931740/94‑1 (MQ=60)
ATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGC > SRR4302533.2161533/1‑94 (MQ=60)
TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCG > SRR4302533.2580434/1‑94 (MQ=60)
TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT < SRR4302533.3484093/94‑1 (MQ=60)
TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT < SRR4302533.229153/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT > SRR4302533.2482990/1‑94 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302533.3879436/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT > SRR4302533.3611983/1‑94 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302533.3970087/94‑1 (MQ=60)
GATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTG < SRR4302533.1973608/94‑1 (MQ=60)
GATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTG < SRR4302533.331489/94‑1 (MQ=60)
ATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGC < SRR4302533.2734842/94‑1 (MQ=60)
ATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGC > SRR4302533.5628879/1‑94 (MQ=60)
TATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCG > SRR4302533.4984648/1‑94 (MQ=60)
TATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCG > SRR4302533.47344/1‑94 (MQ=60)
GGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCA < SRR4302533.5435645/94‑1 (MQ=60)
TCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATA > SRR4302533.3227011/1‑94 (MQ=60)
CAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATAT > SRR4302533.1032409/1‑94 (MQ=60)
AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC < SRR4302533.2924101/94‑1 (MQ=60)
AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC < SRR4302533.2924103/94‑1 (MQ=60)
GCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCA > SRR4302533.3724407/1‑94 (MQ=60)
GCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCA < SRR4302533.5156803/94‑1 (MQ=60)
GCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCA > SRR4302533.4674893/1‑94 (MQ=60)
CACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAAT > SRR4302533.5417204/1‑94 (MQ=60)
CACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAAT > SRR4302533.16867/1‑94 (MQ=60)
ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > SRR4302533.2341335/1‑94 (MQ=60)
CCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCA > SRR4302533.4403509/1‑94 (MQ=60)
CGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCAT < SRR4302533.5681299/94‑1 (MQ=60)
CGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCAT > SRR4302533.4150985/1‑94 (MQ=60)
GCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATC > SRR4302533.2628531/1‑94 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC < SRR4302533.2600294/94‑1 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC < SRR4302533.1885469/94‑1 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC < SRR4302533.1599431/94‑1 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC < SRR4302533.4392235/94‑1 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > SRR4302533.1184664/1‑94 (MQ=60)
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TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > NC_000913/2195531‑2195716
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
