Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,218,691 |
A→G |
V440A (GTG→GCG) |
bglX ← |
beta‑D‑glucoside glucohydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,218,691 | 0 | A | G | 91.8%
| 676.3
/ 40.1
| 256 | V440A (GTG→GCG) | bglX | beta‑D‑glucoside glucohydrolase |
| Reads supporting (aligned to +/- strand): ref base A (14/7); new base G (144/90); total (159/97) |
| Fisher's exact test for biased strand distribution p-value = 8.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 279 total aligned reads displayed.
TAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > NC_000913/2218599‑2218780
|
tAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCa < 2:9083922/93‑1 (MQ=255)
aTGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTcgcg > 2:6846667/1‑93 (MQ=255)
aTGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTcgcg > 2:6109426/1‑93 (MQ=255)
gCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGa < 1:4350391/93‑1 (MQ=255)
ccTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGAt > 2:109359/1‑93 (MQ=255)
cTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGAtt < 2:3576804/93‑1 (MQ=255)
cTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGCACGGTCGCGGAtt > 1:3105799/1‑93 (MQ=255)
tttGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTg > 2:8425325/1‑93 (MQ=255)
ttGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCCTTTTTAATTCCGGTCAGTACGGTCGCGGATTgg > 1:9707118/1‑92 (MQ=255)
ttGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGa > 2:3495817/1‑93 (MQ=255)
tGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGAt > 2:9309773/1‑93 (MQ=255)
tgcACTGGTAACGTGCGCCCCTTTGGGATACAGCACTTTACCGTTTTCCCCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATc < 1:24779/91‑1 (MQ=255)
gTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATc > 2:6541934/1‑93 (MQ=255)
tCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCg > 1:9206031/1‑93 (MQ=255)
cTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCa > 1:5593394/1‑93 (MQ=255)
cTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCa > 2:8580433/1‑93 (MQ=255)
tGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCaa < 1:5849725/93‑1 (MQ=255)
tgTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAac < 2:5076002/92‑1 (MQ=255)
ggTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAac < 2:7349518/93‑1 (MQ=255)
ggTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAac > 1:9533312/1‑93 (MQ=255)
ggTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAac < 1:4858307/93‑1 (MQ=255)
ggTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAac > 1:7844116/1‑93 (MQ=255)
gTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAaca < 1:6520992/93‑1 (MQ=255)
gTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAaca > 2:5461326/1‑93 (MQ=255)
tAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAacac < 1:9347975/93‑1 (MQ=255)
tAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAacac > 1:8143048/1‑93 (MQ=255)
aaCGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATTCCGGTCAGTACGGTCACGGATTGATCGGCAACAcc > 2:2046230/1‑93 (MQ=255)
aaCGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACAcc < 2:378010/93‑1 (MQ=255)
aaCGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACAcc > 2:501512/1‑93 (MQ=255)
aaCGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACAGTCGCGGATTGATCGGCAACAcc < 2:9873613/93‑1 (MQ=255)
gTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGc > 1:2410564/1‑93 (MQ=255)
ttCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCt < 2:318479/93‑1 (MQ=255)
ttCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGAATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCt > 1:3748286/1‑93 (MQ=255)
tCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTg > 1:6796947/1‑93 (MQ=255)
tCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTg > 2:2120913/1‑93 (MQ=255)
tCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTg > 1:7421576/1‑93 (MQ=255)
tCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTg > 2:2881600/1‑93 (MQ=255)
cGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGc > 1:1450276/1‑93 (MQ=255)
gCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGAATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCg > 1:5343334/1‑93 (MQ=255)
ccccTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATTGGCGACACCGGCTGCgg > 2:7530010/1‑93 (MQ=255)
tttGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCa > 2:5760678/1‑93 (MQ=255)
tttGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCa > 1:3736195/1‑93 (MQ=255)
ttGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAg > 1:4928642/1‑93 (MQ=255)
tGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGc > 1:8908880/1‑93 (MQ=255)
cATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGc > 1:3159539/1‑93 (MQ=255)
cATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATACCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGc > 1:7208921/1‑93 (MQ=255)
aTACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGcc > 2:1429061/1‑93 (MQ=255)
aTACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGcc > 1:3368767/1‑93 (MQ=255)
tACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGccc < 1:6959295/93‑1 (MQ=255)
aCAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCa > 2:3318844/1‑93 (MQ=255)
aCAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCa < 1:6870582/93‑1 (MQ=255)
aGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtc > 1:8369746/1‑93 (MQ=255)
aGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtc < 2:2023381/93‑1 (MQ=255)
gCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtca > 2:4085268/1‑93 (MQ=255)
gCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtca < 2:242033/93‑1 (MQ=255)
aCTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacg > 1:57974/1‑93 (MQ=255)
aCTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacg < 1:1598464/93‑1 (MQ=255)
cTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgt > 2:167657/1‑93 (MQ=255)
cTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgt > 1:2696452/1‑93 (MQ=255)
cTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgt > 1:1807248/1‑93 (MQ=255)
cTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgc > 1:6610991/1‑92 (MQ=255)
tttACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCCCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgtc > 1:726791/1‑93 (MQ=255)
ttACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgtca < 2:8206673/93‑1 (MQ=255)
tACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgtcac < 1:9893646/93‑1 (MQ=255)
ccGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATcacgtcacgt > 1:2841865/1‑93 (MQ=255)
cGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGtt < 2:1203580/93‑1 (MQ=255)
cGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGtt < 2:884124/93‑1 (MQ=255)
cGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGtt > 2:1334692/1‑93 (MQ=255)
gTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGttt > 2:6919876/1‑93 (MQ=255)
ttttCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGtttc > 2:5646592/1‑92 (MQ=255)
ttttCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTa > 1:4679816/1‑93 (MQ=255)
ttttCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTa < 1:1207303/93‑1 (MQ=255)
tCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTg < 2:6400228/93‑1 (MQ=255)
aCCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTc < 1:1088058/93‑1 (MQ=255)
aCCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTc > 1:8865395/1‑93 (MQ=255)
ggCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGGCCATCACGTCACCTTTACTGTCCGCCAg > 2:2640202/1‑93 (MQ=255)
ggCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAg < 2:4700497/93‑1 (MQ=255)
tttttAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGc > 1:479628/1‑93 (MQ=255)
tttttAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGc > 1:3440562/1‑93 (MQ=255)
tttttAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGc > 1:6766899/1‑93 (MQ=255)
tttAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGccc < 1:9982055/93‑1 (MQ=255)
aTCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAacc > 2:4402188/1‑93 (MQ=255)
tCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAaccc > 1:7693738/1‑92 (MQ=255)
cGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCg > 2:7881658/1‑93 (MQ=255)
gTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCa > 1:5058410/1‑93 (MQ=255)
tCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCaa < 2:7234686/93‑1 (MQ=255)
cAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAt < 1:3580990/93‑1 (MQ=255)
cAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAt < 1:9267731/93‑1 (MQ=255)
cAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAt < 2:9554043/93‑1 (MQ=255)
aGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtg > 2:7789182/1‑93 (MQ=255)
gTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtgg > 1:1140479/1‑93 (MQ=255)
gTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtgg > 2:1962831/1‑93 (MQ=255)
gTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtgg > 1:2347402/1‑93 (MQ=255)
tACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtggt > 2:4351311/1‑93 (MQ=255)
tACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtggt < 2:4928641/93‑1 (MQ=255)
aCGGTCGCCGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAtggtg < 2:5310873/93‑1 (MQ=255)
ggTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGc < 1:609196/93‑1 (MQ=255)
ggTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGc > 1:6841037/1‑93 (MQ=255)
gTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGcc > 1:4510772/1‑93 (MQ=255)
gTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGcc > 1:4216877/1‑93 (MQ=255)
|
TAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > NC_000913/2218599‑2218780
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATT > NC_000913/2218598‑2218784
|
ATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCG > SRR4302540.1978726/1‑94 (MQ=60)
TAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGC > SRR4302540.6322572/1‑94 (MQ=60)
AATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCG > SRR4302540.4001633/1‑94 (MQ=60)
AATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCG > SRR4302540.7694612/1‑94 (MQ=60)
ATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGG > SRR4302540.6096422/1‑94 (MQ=60)
ATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGG < SRR4302540.5743166/94‑1 (MQ=60)
ATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGG < SRR4302540.3478820/94‑1 (MQ=60)
TGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGA > SRR4302540.10001276/1‑94 (MQ=60)
TGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGA < SRR4302540.6880750/94‑1 (MQ=60)
GCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGAT > SRR4302540.8528232/1‑94 (MQ=60)
GCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGAT < SRR4302540.4397716/94‑1 (MQ=60)
CCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATT < SRR4302540.7629072/94‑1 (MQ=60)
CCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGCACGGTCGCGGATT > SRR4302540.3139796/1‑94 (MQ=60)
CTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTG > SRR4302540.5155360/1‑94 (MQ=60)
TTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCCTTTTTAATTCCGGTCAGTACGGTCGCGGATTGG > SRR4302540.9821206/1‑94 (MQ=60)
TTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCCTTTTTAATCCCGGTCAGTACGGTCGCGGATTGAT > SRR4302540.5063101/1‑94 (MQ=60)
TTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGAT > SRR4302540.4402970/1‑94 (MQ=60)
TGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATC < SRR4302540.4350232/94‑1 (MQ=60)
TGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATC > SRR4302540.7410366/1‑94 (MQ=60)
tgCACTGGTAACGTGCGCCCCTTTGGGATACAGCACTTTACCGTTTTCCCCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCG < SRR4302540.25053/92‑1 (MQ=60)
GTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCG > SRR4302540.9316494/1‑94 (MQ=60)
ACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCA > SRR4302540.5654935/1‑94 (MQ=60)
ACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCA > SRR4302540.8297903/1‑94 (MQ=60)
TGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAAC < SRR4302540.5914422/94‑1 (MQ=60)
TGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAAC > SRR4302540.7935771/1‑94 (MQ=60)
TGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAAC > SRR4302540.9646172/1‑94 (MQ=60)
GGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACA < SRR4302540.5411324/94‑1 (MQ=60)
GGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACA < SRR4302540.4910390/94‑1 (MQ=60)
GGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACA < SRR4302540.1509950/94‑1 (MQ=60)
GTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACAC > SRR4302540.8237564/1‑94 (MQ=60)
GTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACAC < SRR4302540.6593421/94‑1 (MQ=60)
GTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACAC > SRR4302540.6775947/1‑94 (MQ=60)
TAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACC > SRR4302540.2450062/1‑94 (MQ=60)
TAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACC < SRR4302540.9459328/94‑1 (MQ=60)
TAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACC < SRR4302540.151128/94‑1 (MQ=60)
AACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCG < SRR4302540.9576490/94‑1 (MQ=60)
AACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCG > SRR4302540.5177201/1‑94 (MQ=60)
AACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCG < SRR4302540.3305195/94‑1 (MQ=60)
ACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCCG > SRR4302540.1146509/1‑94 (MQ=60)
CGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGC > SRR4302540.4570662/1‑94 (MQ=60)
CGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGC > SRR4302540.2436552/1‑94 (MQ=60)
GTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCT > SRR4302540.9561190/1‑94 (MQ=60)
GTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCT > SRR4302540.9957002/1‑94 (MQ=60)
GTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGAATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCT > SRR4302540.3789184/1‑94 (MQ=60)
TTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTG > SRR4302540.6872128/1‑94 (MQ=60)
TTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTG > SRR4302540.6872127/1‑94 (MQ=60)
TTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTG > SRR4302540.7504244/1‑94 (MQ=60)
TCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGC > SRR4302540.1466044/1‑94 (MQ=60)
TCGCCCCTTCGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGTCCAGTACGGACGCGGATTGATCGGCCACACCGGCTGC > SRR4302540.1466043/1‑94 (MQ=60)
CGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGAATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCG > SRR4302540.5401943/1‑94 (MQ=60)
CCCCTTTGGCATACAGCACTTTACCGTTTTCCCCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGA < SRR4302540.3443280/94‑1 (MQ=60)
CCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGA < SRR4302540.7000036/94‑1 (MQ=60)
CCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGAC > SRR4302540.9661764/1‑94 (MQ=60)
CCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGAC > SRR4302540.8190414/1‑94 (MQ=60)
CCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGAC < SRR4302540.6924372/94‑1 (MQ=60)
CCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGAC < SRR4302540.5843088/94‑1 (MQ=60)
CCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACC < SRR4302540.7348149/94‑1 (MQ=60)
CCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACC > SRR4302540.9784551/1‑94 (MQ=60)
CTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCA > SRR4302540.3776959/1‑94 (MQ=60)
CTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCA > SRR4302540.3776958/1‑94 (MQ=60)
TTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAG > SRR4302540.4981767/1‑94 (MQ=60)
TTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGC > SRR4302540.9012043/1‑94 (MQ=60)
TGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCT > SRR4302540.8888860/1‑94 (MQ=60)
GGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTG < SRR4302540.7489339/94‑1 (MQ=60)
GCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGC > SRR4302540.3193917/1‑94 (MQ=60)
GCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATACCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGC > SRR4302540.7289286/1‑94 (MQ=60)
CATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCC > SRR4302540.3405606/1‑94 (MQ=60)
ATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCC < SRR4302540.10027318/94‑1 (MQ=60)
ATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCC > SRR4302540.6624155/1‑94 (MQ=60)
ATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTACGGACCAGCTGACC > SRR4302540.6938599/1‑94 (MQ=60)
TACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCA < SRR4302540.7036712/94‑1 (MQ=60)
ACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAT > SRR4302540.688816/1‑94 (MQ=60)
ACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAT < SRR4302540.6946742/94‑1 (MQ=60)
ACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAT > SRR4302540.8414086/1‑94 (MQ=60)
CAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATC > SRR4302540.8466883/1‑94 (MQ=60)
CAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATC < SRR4302540.1175852/94‑1 (MQ=60)
AGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCA < SRR4302540.4867918/94‑1 (MQ=60)
AGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCA < SRR4302540.3166919/94‑1 (MQ=60)
CACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACG > SRR4302540.5874366/1‑94 (MQ=60)
CACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACG > SRR4302540.58556/1‑94 (MQ=60)
CACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACG > SRR4302540.3676579/1‑94 (MQ=60)
CACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACG < SRR4302540.3448358/94‑1 (MQ=60)
ACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGT > SRR4302540.2725557/1‑94 (MQ=60)
ACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGT > SRR4302540.1826936/1‑94 (MQ=60)
ACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGC > SRR4302540.6684190/1‑94 (MQ=60)
ACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGT < SRR4302540.1615942/94‑1 (MQ=60)
CTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTC > SRR4302540.3383013/1‑94 (MQ=60)
CTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTC < SRR4302540.943618/94‑1 (MQ=60)
CTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCCCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTC > SRR4302540.734580/1‑94 (MQ=60)
TTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCA > SRR4302540.904911/1‑94 (MQ=60)
TACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACG < SRR4302540.10009182/94‑1 (MQ=60)
TACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACG > SRR4302540.1928933/1‑94 (MQ=60)
ACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGT > SRR4302540.2872617/1‑94 (MQ=60)
ACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGT > SRR4302540.4658731/1‑94 (MQ=60)
ACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGT > SRR4302540.2243916/1‑94 (MQ=60)
CGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGCTCGGCAACACCGGCGGAGAACCGGCTGCCCATCACCTCACGTTT > SRR4302540.9127619/1‑94 (MQ=60)
CGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTT > SRR4302540.2767113/1‑94 (MQ=60)
CGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTT > SRR4302540.9001317/1‑94 (MQ=60)
CGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTT > SRR4302540.476875/1‑94 (MQ=60)
GTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTA > SRR4302540.4729881/1‑94 (MQ=60)
GTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTA > SRR4302540.2556212/1‑94 (MQ=60)
GTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTA > SRR4302540.2556214/1‑94 (MQ=60)
GTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTA > SRR4302540.3780032/1‑94 (MQ=60)
GTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTA > SRR4302540.5923837/1‑94 (MQ=60)
TTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTAC < SRR4302540.1219692/94‑1 (MQ=60)
TTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACT < SRR4302540.7275251/94‑1 (MQ=60)
TTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACT < SRR4302540.9346120/94‑1 (MQ=60)
TTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTG > SRR4302540.3192062/1‑94 (MQ=60)
CACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTC > SRR4302540.8967981/1‑94 (MQ=60)
CACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTC < SRR4302540.3006026/94‑1 (MQ=60)
ACCGACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCC < SRR4302540.1099218/94‑1 (MQ=60)
GACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCC < SRR4302540.8988284/94‑1 (MQ=60)
ACGGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCA < SRR4302540.23865/94‑1 (MQ=60)
GGCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGT > SRR4302540.5487399/1‑94 (MQ=60)
GCATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTG < SRR4302540.6998948/94‑1 (MQ=60)
CATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGG > SRR4302540.11573/1‑94 (MQ=60)
ATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGC > SRR4302540.484768/1‑94 (MQ=60)
ATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGC > SRR4302540.6841687/1‑94 (MQ=60)
ATTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGC > SRR4302540.3477968/1‑94 (MQ=60)
TTTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCC > SRR4302540.9418034/1‑94 (MQ=60)
TTTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCC > SRR4302540.6615522/1‑94 (MQ=60)
TTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCA < SRR4302540.10098444/94‑1 (MQ=60)
TTTAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCA > SRR4302540.7225888/1‑94 (MQ=60)
TAATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACGCCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAAC < SRR4302540.3056630/94‑1 (MQ=60)
ATCCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCC > SRR4302540.7781324/1‑94 (MQ=60)
CCCGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACC < SRR4302540.5097530/94‑1 (MQ=60)
CGGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGC > SRR4302540.4878436/1‑94 (MQ=60)
GGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCA > SRR4302540.5113102/1‑94 (MQ=60)
GGTCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGGTTACTGTCCGCCAGTGGCCCAACCACCGCA > SRR4302540.4930150/1‑94 (MQ=60)
GGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACAACCGCA > SRR4302540.4795988/1‑94 (MQ=60)
TCAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAAT < SRR4302540.247866/94‑1 (MQ=60)
CAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATG < SRR4302540.3620097/94‑1 (MQ=60)
CAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATG > SRR4302540.162850/1‑94 (MQ=60)
CAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATG < SRR4302540.6817705/94‑1 (MQ=60)
CAGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATG < SRR4302540.9378567/94‑1 (MQ=60)
AGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.7864817/1‑94 (MQ=60)
AGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.1152406/1‑94 (MQ=60)
AGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.6390767/1‑94 (MQ=60)
AGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.2372688/1‑94 (MQ=60)
AGTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.237975/1‑94 (MQ=60)
AGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGG > SRR4302540.1342062/1‑94 (MQ=60)
GTACGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGT < SRR4302540.6243311/94‑1 (MQ=60)
TACGGTCGCGGATTGATCGGCACCACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTG < SRR4302540.3702863/94‑1 (MQ=60)
CGGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGC > SRR4302540.6916812/1‑94 (MQ=60)
GGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > SRR4302540.4559648/1‑94 (MQ=60)
GGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > SRR4302540.4262785/1‑94 (MQ=60)
GGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > SRR4302540.4262784/1‑94 (MQ=60)
GGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC > SRR4302540.3843244/1‑94 (MQ=60)
GGTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCC < SRR4302540.615708/94‑1 (MQ=60)
GTCGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCG > SRR4302540.969090/1‑94 (MQ=60)
CGCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGAT < SRR4302540.2072740/94‑1 (MQ=60)
GCGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATT < SRR4302540.3498848/94‑1 (MQ=60)
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ATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATT > NC_000913/2218598‑2218784
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
